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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8439#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3038 fasta sequence
[CAAAGTCGAGATGAATTTGAAGGAGCCCCCCATCACCGGCGCCGGCGCTGGCGCGGCGGCTTCTCCGCCTGCTCCGAGCACCCTCCGGCGGAACCCTCCACGCAGCGCGAGGCCTCCCCCCACCCCTCTCCCCAATTCCAAACCCTCCCAGATCTCTCGCTTGCTCGAGGAGGCGGCGGAGCGGCTCAAGGTGTTCCTCCGCATCCGCCCCCTCCCGCTCCCGGAGCGCAAGGGCAAGGCCAAGTCCCCAACTAATCCCAAGCAAGTGTGCCTCGTCGCCAACTCCCCCAACTCCGTCGCGCTCACCGTCCCGCATTCCAAGCTCCTCGACCCCAAGCGCGGCCGCACCGAGGTCTTCGACGGCTTCTCCTCCGTCTTCTCACCCGATTCCTCACAGCATGATGTATTTAGTCAAGTGATGAATCCGCTGGTGGATGAC---TTGTTGGGAGGAAAGAGTGGCCTTCTGGTTGCAATGGGTCCCACTGGCTCTGGAAAGACCCATACTGTCTTTGGCTCCCCAAGGAATCCTGGACTTGTACCACTCACGCTACGCCGCATCTTCTCTCCAACAACACATGAACCCTTCAGCAAACTACGATCATTTTGCTTCTCAATGTTCGAGATACTTTCTGAGGGAAAAGGAGAGCGGATTCTTGACCTACTGTCTGATGCGACTGACCTTGTTCTCCAGCAGTCAACAATTAAAGGTCTTAAAGAGGTATCCGTTGAAAATTTTGCGGATGCTGAGGCCTTACTTTTATCTGGGATGCTGAAGCGTACCACAGCTGCAACAAATGCTAACAGCAAGTCAAGTCGATCGCAGTGCATTATCACTATACGTGCTGTTCATAAAAGCTCTGATGCAGAAAGTGAGAATTCGCTTAATAATGCTGTCCTGACCATAGCAGACCTTGCGGGGGCAGAGCGGGAAAGGAGAACTGGAAATCAAGGTACACGATTGCTAGAGAGTAATTTCATCAACAATACATCCATGGTTTTTGGTCTCTGTTTGAGGTCTTTGTTAGAGCATCAGAAAAACAAGAAGAAACCCTTGGAGAAGCACTTCAAGAACTCAATGTTGACAAGGTACTTGAGAGACTACCTGGAAGGAAGGAAGAAAATGACTCTGATTTTGAATGTGAAACCAGGAGATGATGATTATTTGGATACATCTTTTTTGCTAAGACAAGCATCTCCGTACATGAAAATAAAGTATACCAACCTTGAGGACTCTTCTGGATTGGTTTCCCAAAAGAGAAGCAGTGCTTCCCTGATTTGCCAAGAGAACACGAAAAAGAGGAAGATTCATAAGGTCGCAGGAAAGGATGACATTGATAAGGATGATGGTGTTACAATTTCTGAAAAAGATGAGTCACAGTACAAGCTTCTTAATTCAGAATTGCGAAGAGTTTCGAGAAATGAAGAAATAATGACAAACTTTGCCAGGGCTTTATGGACTGTTTTAAAGCAGTATAAACAAAAACTTTTGGAGTCTGAGAATGCTGTTGAGAGCACAAGAGAATTGCTTAGATCTAAAGACATCGAAATTATGGAGCTGGAGAAGAAGTTGAAGGTTCTAAGTTGTTCATGCAAGAAATTTCCAGCTGTTGAAGATACCTTTGTTGAGCAAAACAATGATGTGTCTTCTGGTCAAGTGGCTCAAAGTTTTGTTTCTCTATCAAGTCAAACTGATCTTGTATCTATTGACTCTGCTCTAAACAAATCTTTAGCAGTAGAAGAGGTCTCAGAAGAATCTACAGGTCATGGCCCTGAAAGGTCTTCAGATTATGATGACAAGACAGGGACAGGGGGATCTGATGTTTGTGATACTTCTATTATTAAGCTGATAGCGGAAGAAGAATTGTGCTCCGGAGATTGTAAGCCAGAGAAAGCAAGTAGTTCCGATGCTTTTATTCCTGAGCATGATGTGGAAAAAGAAAACATTGGGATAGTGGTACAGGTGCTTGATAAGAAGTTGGATAGGTCTGAAAGTTGCTCTGATGGTGGTGGTGTCACACATTCATCCAGTAGTTTGGATCATCCATCTGATCAAAGCTTTACAGATACATGCCTACAGAATGAAAGCGCAAACCTGTCTCCACAATTTATTGGTGCTAGCAAGAAATCTCCCATAGAGCAAAGTGAAGAAGAAAGGGAAGAGATACGCAATATAACAACGGAGGGGATTCAACAGAATGTTCACACAAGAGGGGTGAAACATCATAGTACTCCAAGTTGTTCCCAAGAAGTGAACTCTGGCTCATTACATGTTAGCTCCAGTCAGTTGCAAGGGATGGGTGCTCTTCAGCAGGATCCTCAGTCAGAAAGATGCAAGCCAACAGTAGAAATAACCATTGTGGAATATGGCTGTGCTCAACCTCCACATGTAGTGGATGATCATGGAGGCATGTATCCATGTACGCTAAATGGAAAATCTTCCCCAAGGAAAGCTCCAATATCTCCAACCAAGGACAATCAGGCTGAAAAACTGACAGATAAAATAGAGGATCTCTCTGCTTCTAAGCCTTGCAATAGAAAGAACACTAGAAGGAGATTGCAGCCTGTGTCAGCTATGATGCTCAAAGAATTCACAGGTCCTGATATATTTGTGGATACCAGAAAGGAAGAAAAAGTGAAATCGTCAAGAGATGCAATGGGGAGATCCGACAAGCTTATTCGACTGTTGACAGACCACCCAACCCGTGCCCGTGGACGAGCCCAGTAGTAGCTTCTTTCTTCTCTTTTGGTCGTGGAGGTGTCCTGAGCTGCCTCTCTACTTTCTTTCTTTCTTGTTTACAAGGTCGATCGGAAGATGTTATTTCGTAGGATGTTCACTCATTTTGCGGTACCAATCACGTACTACTACTTCCACGGTTGTCTTTTGCAGTACCTGCTTGTTCATCTTTTATCGACCTTTTGACGTGTGGGTACATGCGCCTGTGCTCATGCGAATATACATTTCTATGTAAATATGCACTCGTTGCGTATGCGCAATGCAGTTCAAATGTAAATAGGGAGGCAATTCTCGTCAAAAAAAA]
[+] EMBL CB631397 [CAAAGTCGAGATGAATTTGAAGGAGCCCCCCATCACCGGCGCCGGCGCTGGCGCGGCGGCTTCTCCGCCTGCTCCGAGCACCCTCCGGCGGAACCCTCCACGCAGCGCGAGGCCTCCCCCCACCCCTCTCCCCAATTCCAAACCCTCCCAGATCTCTCGCTTGCTCGAGGAGGCGGCGGAGCGGCTCAAGGTGTTCCTCCGCATCCGCCCCCTCCCGCTCCCGGAGCGCAAGGGCAAGGCCAAGTCCCCAACTAATCCCAAGCAAGTGTGCCTCGTCGCCAACTCCCCCAACTCCGTCGCGCTCACCGTCCCGCATTCCAAGCTCCTCGACCCCAAGCGCGGCCGCACCGAGGTCTTCGACGGCTTCTCCTCCGTCTTCTCACCCGATTCCTCACAGCATGATGTATTTAGTCAAGTGATGAATCCGCTGGTGGATGAC TTGTTGGGAGGAAAGAGTGGCCTTCTGGTTGCAATGGGTCCCACTGGCTCTGGAAAGACCCATACTGTCTTTGGCTCCCCAAGGAATCCTGGACTTGTACCACTCACGCTACGCCGCATCTTCTCTCCAACAACACATGAACCCTTCAGCAAACTACGATCATTTTGCTTCTCAATGTTCGAGATACTTTCTGAGGGAAAAGGAGAGCGGATTCTTGACCTACTGTCTGATGCGACTGACCTTGTTCTCCAGCAGTCAACAATTAAAGGTCTTAAAGAGGTATCCGTTGAAAATTTTGCGGATGCTGAGGCCTTACTTTTATCTGGGATGCTGAAGCGTACCACAGCTGCAACAAATGCTAACAGCAAGTCAAGTCGATCGCAGTGCATTATCACTATACGTGCTGTTCATAAA ]
[+] EMBL AK102833 [ CCCCCATCACCGGCGCCGGCGCTGGCGCGGCGGCTTCTCCGCCTGCTCCGAGCACCCTCCGGCGGAACCCTCCACGCAGCGCGAGGCCTCCCCCCACCCCTCTCCCCAATTCCAAACCCTCCCAGATCTCTCGCTTGCTCGAGGAGGCGGCGGAGCGGCTCAAGGTGTTCCTCCGCATCCGCCCCCTCCCGCTCCCGGAGCGCAAGGGCAAGGCCAAGTCCCCAACTAATCCCAAGCAAGTGTGCCTCGTCGCCAACTCCCCCAACTCCGTCGCGCTCACCGTCCCGCATTCCAAGCTCCTCGACCCCAAGCGCGGCCGCACCGAGGTCTTCGACGACTTCTCCTCCGTCTTCTCACCCGATTCCTCACAGAATGATGTATTTAGTCAAGTGATGAATCCGCTGGTGGATGACTTGTTGTTGGGAGGAAAGAGTGGCCTTCTGGTTGCAATGGGTCCCACTGGCTCTGGAAAGACCCATACTGTCTTTGGCTCCCCAAGGAATCCTGGACTTGTACCACTCACGCTACGCCGCATCTTCTCTCCAACAACACATGAACCCTTCAGCAAACTACGATCATTTTGCTTCTCAATGTTCGAGATACTTTCTGAGGGAAAAGGAGAGCGGATTCTTGACCTACTGTCTGATGCGACCGACCTTGTTCTCCAGCAGTCAACAATTAAAGGTCTTAAAGAGGTATCCGTTGAAAATTTTGCGGATGCTGAGGCCTTACTTTTTTCTGGGATGCTGAAGCGTACCACAGCTGCAACAAATGCTAACAGCAAGTCAAGTCGATCGCAGTGCATTATCACTATACGTGCTGTTCATAAAAGCTCTGATGCAGAAAGTGAGAATTCGCTTAATAATGCTGTCCTGACCATAGCAGACCTTGCGGGGGCAGAGCGGGAAAGGAGAACTGGAAATCAAGGTACACGATTGCTAGAGAGTAATTTCATCAACAATACATCCATGGTTTTTGGTCTCTGTTTGAGGTCTTTGTTAGAGCATCAGAAAAACAAGAAGAAACCCTTGGAGAAGCACTTCAAGAACTCAATGTTGACAAGGTACTTGAGAGACTACCTGGAAGGAAGGAAGAAAATGACTCTGATTTTGAATGTGAAACCAGGAGATGATGATTATTTGGATACATCTTTTTTGCTAAGACAAGCATCTCCGTACATGAAAATAAAGTATACCAACCTTGAGGACTCTTCTGGATTGGTTTCCCAAAAGAGAAGCAGTGCTTCCCTGATTTGCCAAGAGAACACGAAAAAGAGGAAGATTCATAAGGTCGCAGGAAAGGATGACATTGATAAGGATGATGGTGTTACAATTTCTGAAAAAGATGAGTCACAGTACAAGCTTCTTAATTCAGAATTGCGAAGAGTTTCGAGAAATGAAGAAATAATGACAAACTTTGCCAGGGCTTTATGGACTGTTTTAAAGCAGTATAAACAAAAACTTTTGGAGTCTGAGAATGCTGTTGAGAGCACAAGAGAATTGCTTAGATCTAAAGACATCGAAATTATGGAGCTGGAGAAGAAGTTGAAGGTTCTAAGTTGTTCATGCAAGAAATTTCCAGCTGTTGAAGATACCTTTGTTGAGCAAAACAATGATGTGTCTTCTGGTCAAGTGGCTCAAAGTTTTGTTTCTCTATCAAGTCAAACTGATCTTGTATCTATTGACTCTGCTCTAAACAAATCTTTAGCAGTAGAAGAGGTCTCAGAAGAATCTACAGGTCATGGCCCTGAAAGGTCTTCAGATTATGATGACAAGACAGGGACAGGGGGATCTGATGTTTGTGATACTTCTATTATTAAGCTGATAGCGGAAGAAGAATTGTGCTCCGGAGATTGTAAGCCAGAGAAAGCAAGTAGTTCCGATGCTTTTATTCCTGAGCATGATGTGGAAAAAGAAAACATTGGGATAGTGGTACAGGTGCTTGATAAGAAGTTGGATAGGTCTGAAAGTTGCTCTGATGGTGGTGGTGTCACACATTCATCCAGTAGTTTGGATCATCCATCTGATCAAAGCTTTACAGATACATGCCTACAGAATGAAAGCGCAAACCTGTCTCCACAATTTATTGGTGCTAGCAAGAAATCTCCCATAGAGCAAAGTGAAGAAGAAAGGGAAGAGATACGCAATATAACAACGGAGGGGATTCAACAGAATGTTCACACAAGAGGGGTGAAACATCATAGTACTCCAAGTTGTTCCCAAGAAGTGAACTCTGGCTCATTACATGTTAGCTCCAGTCAGTTGCAAGGGATGGGTGCTCTTCAGCAGGATCCTCAGTCAGAAAGATGCAAGCCAACAGTAGAAATAACCATTGTGGAATATGGCTGTGCTCAACCTCCACATGTAGTGGATGATCATGGAGGCATGTATCCATGTACGCTGAATGGAAAATCTTCCCCAAGGAAAGCTCCAATATCTCCAACCAAGGACAATCAGGCTGAAAAACTGACAGATAAAATAGAGGATCTCTCTGCTTCTAAGCCTTGCAATAGAAAGAACACTAGAAGGAGATTGCAGCCTGTGTCAGCTATGATGCTCAAAGAATTCACAGGTCCTGATATATTTGTGGATACCAGAAAGGAAGAAAAAGTGAAATCGTCAAGAGATGCAATGGGGAGATCCGACAAGCTTATTCGACTGTTGACAGACCACCCACCCCGTGCCCGTGGACGAGCCCAGTAGTAGCTTCTTTCTTCTCTTTTGGTCGTGGAGGTGTCCTGAGCTGCCTCTCTACTTTCTTTCTTTCTTGTTTACAAGGTCGATCGGAAGATGTTATTTCGTAGGATGTTCACTCATTTTGCGGTACCAATCACGTACTACTACTTCCACGGTTGTCTTTTGCAGTACCTGCTTGTTCATCTTTTATCGACCTTTTGACGTGTGGGTACATGCGCCTGTGCTCATGCGAATATACATTTCTATGTAAATATGCACTCGTTGCGTATGCGCAATGCAGTTCAAATGTAAATAGGGAGGCAATTC ]
[+] EMBL CA999438 [ gcAAACAATGATGTGTCTTCTGGTCGAGTGGCTCAAAGTTTTGTTTCTCTATCAAGTCAAACTGATCTTGTATCTATTGACTCTGCTCTAAACAAATCTTTAGCAGTAGAAGAGGTCTCAGAAGAATCTACAGGTCATGGCCCTGAAAGGTCTTCAGATTATGATGACAAGACAGGGACAGGGGGATCTGATGTTTGTGATACTTCTATTATTAAGCTGATAGCGGAAGAAGAATTGTGCTCCGGAGATTGTAAGCCAGAGAAAGCAAGTAGTTCCGATGCTTTTATTCCTGAGCATGATGTGGAAAAAGAAAACATTGGGATAGTGGTACAGGTGCTTGATAAGAAGTTGGATAGGTCTGAAAGTTGCTCTGATGGTGGTGGTGTCACACATTCATCCAGTAGTTTGGATCATCCATCTGATCAAAGCTTTACAGATACATGCCTACAGAATGAAAGCGCAAACCTGTCTCCACAATTTATTGGTGCTAGCAAGAA ]
[-] EMBL CB631398 [ GTTAGCTCCAGTCAGTTGCAAGGGATGGGTGCTCTTCAGCAGGATCCTCAGTCAGAAAGATGCAAGCCAACAGTAGAAATAACCATTGTGGAATATGGCTGTGCTCAACCTCCACATGTAGTGGATGATCATGGAGGCATGTATCCATGTACGCTAAATGGAAAATCTTCCCCAAGGAAAGCTCCAATATCTCCAACCAAGGACAATCAGGCTGAAAAACTGACAGATAAAATAGAGGATCTCTCTGCTTCTAAGCCTTGCAATAGAAAGAACACTAGAAGGAGATTGCAGCCTGTGTCAGCTATGATGCTCAAAGAATTCACAGGTCCTGATATATTTGTGGATACCAGAAAGGAAGAAAAAGTGAAATCGTCAAGAGATGCAATGGGGAGATCCGACAAGCTTATTCGACTGTTGACAGACCACCCAACCCGTGCCCGTGGACGAGCCCAGTAGTAGCTTCTTTCTTCTCTTTTGGTCGTGGAGGTGTCCTGAGCTGCCTCTCTACTTTCTTTCTTTCTTGTTTACAAGGTCGATCGGAAGATGTTATTTCGTAGGATGTTCACTCATTTTGCGGTACCAATCACGTACTACTACTTCCACGGTTGTCTTTTGCAGTACCTGCTTGTTCATCTTTTATCGACCTTTTGACGTGTGGGTACATGCGCCTGTGCTCATGCGAATATACATTTCTATGTAAATATGCACTCGTTGCGTATGCGCAATGCAGTTCAAATGTAAATAGGGAGGCAATTCT ]
[-] EMBL CA760866 [ ATGTAGTGGATGATCAGGGAGGCATGTATCCATGTACGCTAAATGGAAAATCTTCCCCAAGGAAAGCTCCAATATCTCCAACCAAGGACAATCAGGCTGAAAAACTGACAGATAAAATAGA GATCTCTCTGCTTCTAAGCCTTGCAATAGAAAGAACACTAGAAGGAGATTGCAGCCTGTGTCAGCTATGATGCTCAAAGAATTCACAGGTCCTGATATATTTGTGGATACCAGAAAGGAAGAAAAAGTGAAATCGTCAAGAGATGCAATGGGGAGATCCGACAAGCTTATTCGACTGTTGACAGACCACCCAACCCGTGCCCGTGGACGAGCCCAGTAGTAGCTTCTTTCTTCTCTTTTGGTCGTGGAGGTGTCCTGAGCTGCCTCTCTACTTTCTTTCTTTCTTGTTTACAAGGTCGATCGGAAGATATTATTTCGTAGGATGTTCACTCATTTTGCGGTACCAATCACGTACTACTACTTCCACGGTTGTCTTTTGCAGTACCTGCTTGTTCATCTTTTATCGACCTTTTGACGTGTGGGTACATGCGCCTGTGCTCATGCGAATATACATTTCTATGTAAATATGCACTCGTTGCGTATGCGCAATGCAGTTCAAATGTAAATAGGGAGGCAATTCTCGTCAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||