cluster # 8470

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Oryza sativa
cluster # 8470 cluster # 8470 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8470#0 length = 1792 sequences # 5
consensusID : consensus_8470#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1792
fasta sequence
                              [AATACTCGTGGTCGACCCACGCGTCCGCAACAAGCCAACCAAGAAGAGGAGAGGAGAAGAGAGGAGTCAAGAAACGCAAAAGGTTATCAACAGTAAGTACTCATTGAAGTATCACTTCTTCAGGAGTAGTATGGGTATTGAAATTGTACCTCAATCCTTCAATGAGGAGCTGGATTCTACTGTTACTATCACTCCTGCTAGTGACAACATAGATGTGTCTGATGATACAAGTGTTCCTCATCCATCAGAAGTGCCTGCCACAGTAAATGTTGTTCTAGTTGAGCAATCTGATAATTCAATCTCTGAACCTTTGGAATCTGATGGAGCCAATGGAGCTACAGAAAATGTTGTTCCCTTGGCAAGTGAGAAGTCTACTGACAACAATGATGCTATGAATTCAGAGCCAGTGAATTCAGAACCATATGAAGCATCTCCTGCTAATAATGCTGAAAAGGGAGATGTGATGCAGCAGAGTGATGAGAACAATGGTGATAAACAGGAAAATCAGGATCTGTTGTCTCCAATGGCAGAAACAGCAGGAAGTGACAGTACCTCAGTCACATCGATGGAAGATGTTCAAGAAGCAAAGGATGCTGCTCCATCAGAGACAGATGATGCTACTGGCCACCCTCCTGATCTGTCAAATGACAAAGCTTGTGCTGGAAATGGAAATGGAAATGTCTTCCAAAATGCAAAGTGTGTCTTGACAACTTCGACAAAGAAGATGAAGAGAAGTGCATCTGCAACTACAAGGAAGTCACTGCAAGCTACTAATACTGACGAAGGGAATGCTTCTACTCTCACCAACTCGAAATCATCAAATGGAAGGACCACAACAGTTCCAGCAGGCCCAGTTTTCAGATGTACTGAACGTGCCGAGAAGCGCAGAGAATTTTACATGAAGTTGGAGGAGAAGCACCAAGCTTTGGAGGAAGAGAAGATTCAGTTGGAGGCAAAATTGAAGAAAGAACAAGAGGAAGCACTGAAGCTGCTGAGGAAGAGCCTGACGTTCAAGGCCACACCAATGCCAAGCTTCTACCACGAGGCTCCTTCTCCCAAGGCTGAATACAAGAAGCTGCCGACGACGCGGCCCAAGTCGCCAAAGCTGGGGAGGAGGAAGGCCTCGACGGCGGCGGACGCCTCCAACTCGTCGGAGGAGAGCGACAGCACGCCGCGGCCGTGCTGCCGCGCCAGCCGCGACAGCCTCGACAGCATCTGCAAATGCAGCAGCAGCAGCAGAAACGGCAAGCCGCAGCAACCTGCAACCGCGAAGCCGGCAGCCTCCAAGAAGCAGCCCAAGCCACACGCCCACAAGCTCTCCGACCAGAGCGCCATGAACATCGCCGTCCACTAGCTGCTTCTCTCTCTGTCTCTCTCTTTCTTGCTTGGCTGCATGGATCAATCATGGAGGAAGGAACCAACCACCCAATTCAGGAGGAAAAAGAATCGAGTTCTTGTTTTTTTTCTTCTTCTTCTTCTCTAAGTAATTATTGGGAGTGATATGATGGGCTTCTGCAATCTTCAATCATGTGGTATTGGTGTAGATAATAAGTTATGATGATGATGATGCACAAGAGGGTTTGTGTGAGACTGCCTGCCATGGGTGAAGTTCAGAAGTGATGTTTTATTTTTAATTTATGCTGATTTTCACTTTGTTTATTTTGGGGATGTGAGAATGGCATGTGTCAGTCATAACTTCTTTTTCTTAATTTATGTGATGTGGGTGTTCTTGATGTAATTTATGTATTTATATATAATGTATATACTCACAATGCAAACAGAAGGCTTTGTT]

[+] EMBL OSS10928A            [AATACTCGTGGTCGACCCACGCGTCCGCAACAAGCCAACCAAGAAGAGGAGAGGAGAAGAGAGGAGTCAAGAAACGCAAAAGGTTATCAACAGTAAGTACTCATTGAAGTATCACTTCTTCAGGAGTAGTATGGGTATTGAAATTGTACCTCAATCCTTCAATGAGGAGCTGGATTCTACTGTTACTATCACTCCTGCTAGTGACAACATAGATGTGTCTGATGATACAAGTGTTCCTCATCCATCAGAAGTGCCTGCCACAGTAAATGTTGTTCTAGTTGAGCAATCTGATAATTCAATCTCTGAACCTTTTGAATCTGATGGAGCCAATGGAGCTACAGAAAATGTTGTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK068548             [                           CAACAAGCCAACCAAGAAGAGGAGAGGAGAAGAGAGGAGTCAAGAAACGCAAAAGGTTATCAACAGTAAGTACTCATTGAAGTATCACTTCTTCAGGAGTAGTATGGGTATTGAAATTGTACCTCAATCCTTCAATGAGGAGCTGGATTCTACTGTTACTATCACTCCTGCTAGTGACAACATAGATGTGTCTGATGATACAAGTGTTCCTCATCCATCAGAAGTGCCTGCCACAGTAAATGTTGTTCTAGTTGAGCAATCTGATAATTCAATCTCTGAACCTTTGGAATCTGATGGAGCCAATGGAGCTACAGAAAATGTTGTTCCCTTGGCAAGTGAGAAGTCTACTGACAACAATGATGCTATGAATTCAGAGCCAGTGAATTCAGAACCATATGAAGCATCTCCTGCTAATAATGCTGAAAAGGGAGATGTGATGCAGCAGAGTGATGAGAACAATGGTGATAAACAGGAAAATCAGGATCTGTTGTCTCCAATGGCAGAAACAGCAGGAAGTGACAGTACCTCAGTCACATCGATGGAAGATGTTCAAGAAGCAAAGGATGCTGCTCCATCAGAGACAGATGATGCTACTGGCCACCCTCCTGATCTGTCAAATGACAAAGCTTGTGCTGGAAATGGAAATGGAAATGTCTTCCAAAATGCAAAGTGTGTCTTGACAACTTCGACAAAGAAGATGAAGAGAAGTGCATCTGCAACTACAAGGAAGTCACTGCAAGCTACTAATACTGACGAAGGGAATGCTTCTACTCTCACCAACTCGAAATCATCAAATGGAAGGACCACAACAGTTCCAGCAGGCCCAGTTTTCAGATGTACTGAACGTGCCGAGAAGCGCAGAGAATTTTACATGAAGTTGGAGGAGAAGCACCAAGCTTTGGAGGAAGAGAAGATTCAGTTGGAGGCAAAATTGAAGAAAGAACAAGAGGAAGCACTGAAGCTGCTGAGGAAGAGCCTGACGTTCAAGGCCACACCAATGCCAAGCTTCTACCACGAGGCTCCTTCTCCCAAGGCTGAATACAAGAAGCTGCCGACGACGCGGCCCAAGTCGCCAAAGCTGGGGAGGAGGAAGGCCTCGACGGCGGCGGACGCCTCCAACTCGTCGGAGGAGAGCGACAGCACGCCGCGGCCGTGCTGCCGCGCCAGCCGCGACAGCCTCGACAGCATCTGCAAATGCAGCAGCAGCAGCAGAAACGGCAAGCCGCAGCAACCTGCAACCGCGAAGCCGGCAGCCTCCAAGAAGCAGCCCAAGCCACACGCCCACAAGCTCTCCGACCAGAGCGCCATGAACATCGCCGTCCACTAGCTGCTTCTCTCTCTGTCTCTCTCTTTCTTGCTTGGCTGCATGGATCAATCATGGAGGAAGGAACCAACCACCCAATTCAGGAGGAAAAAGAATCGAGTTCTTGTTTTTTTTCTTCTTCTTCTTCTCTAAGTAATTATTGGGAGTGATATGATGGGCTTCTGCAATCTTCAATCATGTGGTATTGGTGTAGATAATAAGTTATGATGATGATGATGCACAAGAGGGTTTGTGTGAGACTGCCTGCCATGGGTGAAGTTCAGAAGTGATGTTTTATTTTTAATTTATGCTGATTTTCACTTTGTTTATTTTGGGGATGTGAGAATGGCATGTGTCAGTCATAACTTCTTTTTCTTAATTTATGTGATGTGGGTGTTCTTGATGTAATTTATGTATTTATATATAATGTATATACTCACAATGCAAACAGAAGGCTTTGTT]
[+] EMBL CB644434             [                                    AACCAACAAGAGGAGAGGAGAAGAGAGGAGTCAAGAAACGCAAAAGGTTATCAACAGTAAGTACTCATTGAAGTATCACTTCTTCAGGAGTAGTATGGGTATTGAAATTGTACCTCAATCCTTCAATGAGGAGCTGGATTCTACTGTTACTATCACTCCTGCTAGTGACAACATAGATGTGTCTGATGATACAAGTGTTCCTCATCCATCAGAAGTGCCTGCCACAGTAAATGTTGTTCTAGTTGAGCAATCTGATAATTCAATCTCTGAACCTTTGGAATCTGATGGAGCCAATGGAGCTACAGAAAATGTTGTTCCCTTGGCAAGTGAGAAGTCTACTGACAACAATGATGCTATGAATTCAGAGCCAGTGAATTCAGAACCATATGAAGCATCTCCTGCTAATAATGCTGAAAAGGGAGATGTGATGCAGCAGAGTGATGAGAACAATGGTGATAAACAGGAAAATCAGGATCTGTTGTCTCCAATGGCAGAAACAGCAGGAAGTGACAGTACCTCAGTCACATCGATGGAAGATGTTCAAGAAGCAAAGGATGCTGCTCCATCAGAGACAGATGATGCTACTGGCCACCCTCCTGATCTGTCAAATGACAAAGCTTGTGCTGGAAATGGAAATGGAAATGTCTTCCAAAATGCAAAGTGTGTCTTGACAACTTCGACAAAGAAGATGAAGAGAAGTGCATCTGCAACTACAAGGAAGTCACTGCAAGCTACTAATACTGACGAAGGGAATGCTTCTACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB644435             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAGGACCACAACAGTTCCAGCAGGCCCAGTTTTCAGATGTACTGAACGTGCCGAGAAGCGCAGAGAATTTTACATGAAGTTGGAGGAGAAGCACCAAGCTTTGGAGGAAGAGAAGATTCAGTTGGAGGCAAAATTGAAGAAAGAACAAGAGGAAGCACTGAAGCTGCTGAGGAAGAGCCTGACGTTCAAGGCCACACCAATGCCAAGCTTCTACCACGAGGCTCCTTCTCCCAAGGCTGAATACAAGAAGCTGCCGACGACGCGGCCCAAGTCGCCAAAGCTGGGGAGGAGGAAGGCCTCGACGGCGGCGGACGCCTCCAACTCGTCGGAGGAGAGCGACAGCACGCCGCGGCCGTGCTGCCGCGCCAGCCGCGACAGCCTCGACAGCATCTGCAAATGCAGCAGCAGCAGCAGAAACGGCAAGCCGCAGCAACCTGCAACCGCGAAGCCGGCAGCCTCCAAGAAGCAGCCCAAGCCACACGCCCACAAGCTCTCCGACCAGAGCGCCATGAACATCGCCGTCCACTAGCTGCTTCTCTCTCTGTCTCTCTCTTTCTTGCTTGGCTGCATGGATCAATCATGGAGGAAGGAACCAACCACCCAATTCAGGAGGAAAAAGAATCGAGTTCTTGTTTTTTTTCTTCTTCTTCTTCTCTAAGTAATTATTGGGAGTGATATGATGGGCTTCTGCAATCTTCAATCATGTGGTATTGGTGTAGATAATAAGTTATGATGATGATGATGCACAAGAGGGTTTGTGTGAGACTGCCTGCCATGGGTGAAGTTCAGAAGTGATGTTTTATTTTTAAaaaaaaaaa                                                                                                                                                     ]
[+] EMBL AU085997             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGGCAGCCTCCAAGAAGCAGCCNAAGCCACACGCCCACAAGCTCTCCGACCAGAGCGCCNTGAACATCGCCGTCCACTAGCNGCTTCTCTCTCTGTCNCTCTCTTTCTTGCTTGGCTGCATGGATCAATCATGGAGGAAGGNACCAACCACCCAATTCAGGAGGAAAAAGAATCGAGTTCTTGTTTTTNTTCTNCTTCTTCTTCTCTAAGTAATTATTGGGAGTGATATGATGGGCTTCTGCAATCTTCAATCATGTGGTATTGGTGTAGATAATAAGTTATGATGATGATGATGCACAAGAGGGTTTGTGTGAGACTGCCTGCCATGGGTGAAGTTCAGAAGTGATGTTNTATTTTTAATTTATGCTGATTTTCACTTTGTTTATTTTGGGGATGTGAGAATGGCATGTGTCAGTCATAACTTCTTTTTCTTAATTTATGTGATGTGGGTGTTCTTGATGTAAaaaaaaa                                               ]




>consensus_8470#0
AATACTCGTGGTCGACCCACGCGTCCGCAACAAGCCAACCAAGAAGAGGAGAGGAGAAGA
GAGGAGTCAAGAAACGCAAAAGGTTATCAACAGTAAGTACTCATTGAAGTATCACTTCTT
CAGGAGTAGTATGGGTATTGAAATTGTACCTCAATCCTTCAATGAGGAGCTGGATTCTAC
TGTTACTATCACTCCTGCTAGTGACAACATAGATGTGTCTGATGATACAAGTGTTCCTCA
TCCATCAGAAGTGCCTGCCACAGTAAATGTTGTTCTAGTTGAGCAATCTGATAATTCAAT
CTCTGAACCTTTGGAATCTGATGGAGCCAATGGAGCTACAGAAAATGTTGTTCCCTTGGC
AAGTGAGAAGTCTACTGACAACAATGATGCTATGAATTCAGAGCCAGTGAATTCAGAACC
ATATGAAGCATCTCCTGCTAATAATGCTGAAAAGGGAGATGTGATGCAGCAGAGTGATGA
GAACAATGGTGATAAACAGGAAAATCAGGATCTGTTGTCTCCAATGGCAGAAACAGCAGG
AAGTGACAGTACCTCAGTCACATCGATGGAAGATGTTCAAGAAGCAAAGGATGCTGCTCC
ATCAGAGACAGATGATGCTACTGGCCACCCTCCTGATCTGTCAAATGACAAAGCTTGTGC
TGGAAATGGAAATGGAAATGTCTTCCAAAATGCAAAGTGTGTCTTGACAACTTCGACAAA
GAAGATGAAGAGAAGTGCATCTGCAACTACAAGGAAGTCACTGCAAGCTACTAATACTGA
CGAAGGGAATGCTTCTACTCTCACCAACTCGAAATCATCAAATGGAAGGACCACAACAGT
TCCAGCAGGCCCAGTTTTCAGATGTACTGAACGTGCCGAGAAGCGCAGAGAATTTTACAT
GAAGTTGGAGGAGAAGCACCAAGCTTTGGAGGAAGAGAAGATTCAGTTGGAGGCAAAATT
GAAGAAAGAACAAGAGGAAGCACTGAAGCTGCTGAGGAAGAGCCTGACGTTCAAGGCCAC
ACCAATGCCAAGCTTCTACCACGAGGCTCCTTCTCCCAAGGCTGAATACAAGAAGCTGCC
GACGACGCGGCCCAAGTCGCCAAAGCTGGGGAGGAGGAAGGCCTCGACGGCGGCGGACGC
CTCCAACTCGTCGGAGGAGAGCGACAGCACGCCGCGGCCGTGCTGCCGCGCCAGCCGCGA
CAGCCTCGACAGCATCTGCAAATGCAGCAGCAGCAGCAGAAACGGCAAGCCGCAGCAACC
TGCAACCGCGAAGCCGGCAGCCTCCAAGAAGCAGCCCAAGCCACACGCCCACAAGCTCTC
CGACCAGAGCGCCATGAACATCGCCGTCCACTAGCTGCTTCTCTCTCTGTCTCTCTCTTT
CTTGCTTGGCTGCATGGATCAATCATGGAGGAAGGAACCAACCACCCAATTCAGGAGGAA
AAAGAATCGAGTTCTTGTTTTTTTTCTTCTTCTTCTTCTCTAAGTAATTATTGGGAGTGA
TATGATGGGCTTCTGCAATCTTCAATCATGTGGTATTGGTGTAGATAATAAGTTATGATG
ATGATGATGCACAAGAGGGTTTGTGTGAGACTGCCTGCCATGGGTGAAGTTCAGAAGTGA
TGTTTTATTTTTAATTTATGCTGATTTTCACTTTGTTTATTTTGGGGATGTGAGAATGGC
ATGTGTCAGTCATAACTTCTTTTTCTTAATTTATGTGATGTGGGTGTTCTTGATGTAATT
TATGTATTTATATATAATGTATATACTCACAATGCAAACAGAAGGCTTTGTT
clustalw multiple alignements is not computed in this case