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Oryza sativa
cluster # 8489 cluster # 8489       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8489#0 length = 1048 sequences # 5  

consensusID : consensus_8489#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1048
fasta sequence
                              [CCAACCCCTGCCCACCTCGTCGTCCTCCTCCTCTCCTCAGATCGGCGGCGAGCGGCGGCGGCGGCGCACGGGCGATGGCGAAGTCGAGCGCGGACGACGCCGAGCTGCGGCGCGCGTGCGCGCAGGCCGTGGCGGCTTCGGGGGCGCGCGGCGAGGAGGTGTCCTTCTCCATCCGCGTCGCCAAGGGGAGGGGCATCTTCGAGAAGCTCGGCCGCCTCGCCAAGCCCCGCGTCCTCGCGCTCACCGTTAAACAATCGACAAAAGGTGAGGCAGCCAAAGCTTTTCTCCGAGTATTGAAGTATTCATCCGGCGCAGTACTTGAGCCAGCCAAGCTTTACAAGTTGAAACATCTCACAAAGGTTGAGGTTATTTCGAATGATCCTAGTGGTTGCACGTTTGTATTGGGGTTTGATAACCTTAGAAGTCAGAGTGTTGCCCCTCCACAATGGACAATGCGCAACATTGATGACAGAAACCGCCTACTTTTTTCTATCCTGACCATGTGCAAAGAGATACTTAGCTATCTTCCAAAAGTCGTTGGAATTGATTTTGTGGAGCTAGCCCTCTGGGCCAAGGAAAATACAGTGACTCTGGACAACCAATCGAGCACCCAAGATGGACAAGAAAAATCTGTCACAACTCAAACTGAGAGGAAAGTAACTGTAACTGTTGAAAATGATCTTGTGTCCCAAGCAAAGGATGAAGAGGAAGACATGGAGGCACTTCTTGACACATATGTCATGGGCATAGGTGAAGCAGATGCTTTCTCTGAGAGATTGAAACAGGAACTTGTTGCTTTGGAAGCAGCCAATGTCTATNCACTACTGCAGAGTGAACCTTTAATAGATGAGGTTTTGCAGGGTCTGGATGCTGCTAGTGCAACCGTAGATGATATGGATGAGTGGTTACGCATTTTTAATATGAAGCTCAGGCATATGAGAGAAGATATTGCATCGATTGAATCACGCAACAATGGCTTGGAGATGCAGTCCGTAAATAACAAAGGACTCGTTGAAGAACTAGAAAAGTTGCTTGATCGCTTGCGAAT]

[+] EMBL CB652866             [CCAACCCCTGCCCACCTCGTCGTCCTCCTCCTCTCCTCAGATCGGCGGCGAGCGGCGGCGGCGGCGCACGGGCGATGGCGAAGTCGAGCGCGGACGACGCCGAGCTGCGGCGCGCGTGCGCGCAGGCCGTGGCGGCTTCGGGGGCGCGCGGCGAGGAGGTGTCCTTCTCCATCCGCGTCGCCAAGGGGAGGGGCATCTTCGAGAAGCTCGGCCGCCTCGCCAAGCCCCGCGTCCTCGCGCTCACCGTTAAACAATCGACAAAAGGTGAGGCAGCCAAAGCTTTTCTCCGAGTATTGAAGTATTCATCCGGCGCAGTACTTGAGCCAGCCAAGCTTTACAAGTTGAAACATCTCACAAAGGTTGAGGTTATTTCGAATGATCCTAGTGGTTGCACGTTTGTATTGGGGTTTGATAACCTTAGAAGTCAGAGTGTTGCCCCTCCACAATGGACAATGCGCAACATTGATGACAGAAACCGCCTACTTTTTTCTATCCTGACCATGTGCAAAGAGATACTTAGCTATCTTCCAAAAGTCGTTGGAATTGATTTTGTGGAGCTAGCCCTCTGGGCCAAGGAAAATACAGTGACTCTGGACAACCAATCGAGCACCCAAGATGGACAAGAAAAATCTGTCACAACTCAAACTGAGAGGAAAGTAACTGTAACTGTTGAAAATGATCTTGTGTCCCAAGCAAAGGATGAAGAGGAAGACATGGAGGCACTTCTTGACACATATGTCATGGGCATACGTGAAGCAca                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB672576             [    CCGCGGCCCACCTCGTCGTCCTCCTCCTCTCCTCAGATCGGCGGCGAGCGGCGGCGGCGGCGCACGGGCGATGGCGAAGTCGAGCGCGGACGACGCCGAGCTGCGGCGCGCGTGCGCGCAGGCCGTGGCGGCTTCGGGGGCGCGCGGCGAGGAGGTGTCCTTCTCCATCCGCGTCGCCAAGGGGAGGGGCATCTTCGAGAAGCTCGGCCGCCTCGCCAAGCCCCGCGTCCTCGCGCTCACCGTTAAACAATCGACAAAAGGTGAGGCAGCCAAAGCTTTTCTCCGAGTATTGAAGTATTCATCCGGCGCAGTACTTGAGCCAGCCAAGCTTTACAAGTTGAAACATCTCACAAAGGTTGAGGTTATTTCGAATGATCCTAGTGGTTGCACGTTTGTATTGGGGTTTGATAACCTTAGAAGTCAGAGTGTTGCCCCTCCACAATGGACAATGCGCAACATTGATGACAGAAACCGCCTACTTTTTTCTATCCTGACCATGTGCAAAGAGATACTTAGCTATCTTCCAAAAGTCGTTGGAATTGATTTTGTGGAGCTAGCCCTCTGGGCCAAGGAAAATACAGTGACTCTGGACAACCAATCGAGCACCCAAGATGGACAAGAAAAATCTGTCACAACTCAAACTGAGAGGAAAGTAACTGTAACTGTTGAAAATGATCTTGTGTCCCAAGCAAAGGAT                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB651175             [                   TCGTCCTCCTCCTCTCCTCAGATCGGCGGCGAGCGGCGGCGGCGGCGCACGGGCGATGGCGAAGTCGAGCGCGGACGACGCCGAGCTGCGGCGCGCGTGCGCGCAGGCCGTGGCGGCTTCGGGGGCGCGCGGCGAGGAGGTGTCCTTCTCCATCCGCGTCGCCAAGGGGAGGGGCATCTTCGAGAAGCTCGGCCGCCTCGCCAAGCCCCGCGTCCTCGCGCTCACCGTTAAACAATCGACAAAAGGTGAGGCAGCCAAAGCTTTTCTCCGAGTATTGAAGTATTCATCCGGCGCAGTACTTGAGCCAGCCAAGCTTTACAAGTTGAAACATCTCACAAAGGTTGAGGTTATTTCGAATGATCCTAGTGGTTGCACGTTTGTATTGGGGTTTGATAACCTTAGAAGTCAGAGTGTTGCCCCTCCACAATGGACAATGCGCAACATTGATGACAGAAACCGCCTACTTTTTTCTATCCTGACCATGTGCAAAGAGATACTTAGCTATCTTCCAAAAGTCGTTGGAATTGATTTTGTGGAGCTAGCCCTCTGGGCCAAGGAAAATACAGTGACTCTGGACAACCAATCGAGCACCCAAGATGGACAAGAAAAATCTGTCACAACTCAAACTGAGAGGAAAGTAACTGTAACTGTTGAAAATGATCTTGTGTCCCAAGCAAAGGATGAAGAGGAAGACATGGAGGCACTTCTTGACACATATGTCATGGGCATAGGTGAAGCAGATGCTTTCTCTGAGAGATTGAAACAGGAACTTGTTGCTTTGGAAGCAGCCAATGTCT                                                                                                                                                                                                                                        ]
[+] EMBL CB663386             [                       CCTCCTCCTCTCCTCAGATCGGCGGCGAGCGGCGGCGGCGGCGCACGGGCGATGGCGAAGTCGAGCGCGGACGACGCCGAGCTGCGGCGCGCGTGCGCGCAGGCCGTGGCGGCTTCGGGGGCGCGCGGCGAGGAGGTGTCCTTCTCCATCCGCGTCGCCAAGGGGAGGGGCATCTTCGAGAAGCTCGGCCGCCTCGCCAAGCCCCGCGTCCTCGCGCTCACCGTTAAACAATCGACAAAAGGTGAGGCAGCCAAAGCTTTTCTCCGAGTATTGAAGTATTCATCCGGCGCAGTACTTGAGCCAGCCAAGCTTTACAAGTTGAAACATCTCACAAAGGTTGAGGTTATTTCGAATGATCCTAGTGGTTGCACGTTTGTATTGGGGTTTGATAACCTTAGAAGTCAGAGTGTTGCCCCTCCACAATGGACAATGCGCAACATTGATGACAGAAACCGCCTACTTTTTTCTATCCTGACCATGTGCAAAGAGATACTTAGCTATCTTCCAAAAGTCGTTGGAATTGATTTTGTGGAGCTAGCCCTCTGGGCCAAGGAAAATACAGTGACTCTGGACAACCAATCGAGCACCCAAGATGGACAAGAAAAATCTGTCACAACTCAAACTGAGAGGAAAGTAACTGTAACTGTTGAAAATGATCTTGTGTCCCAAGCAAAGGATGAAGAGGAAGACATGGAGGCACTTCTTGACACATATGTCATGGGCATAGGTGAAGCAGATGCTTTCTCTGAGAGATTGAAACAGGAACTTGTTGCTTTGGAAGCAGCCAATGTCTATNCACTACTGCAGAG                                                                                                                                                                                                                        ]
[+] EMBL AY224571             [                                                                                   TCGAGCGCGGACGACGCCGAGCTGCGGCGCGCGTGCGCGCAGGCCGTGGCGGCTTCGGGGGCGCGCGGCGAGGAGGTGTCCTTCTCCATCCGCGTCGCCAAGGGGAGGGGCATCTTCGAGAAGCTCGGCCGCCTCGCCAAGCCCCGCGTCCTCGCGCTCACCGTTAAACAATCGACAAAAGGTGAGGCAGCCAAAGCTTTTCTCCGAGTATTGAAGTATTCATCCGGCGCAGTACTTGAGCCAGCCAAGCTTTACAAGTTGAAACATCTCACAAAGGTTGAGGTTATTTCGAATGATCCTAGTGGTTGCACGTTTGTATTGGGGTTTGATAACCTTAGAAGTCAGAGTGTTGCCCCTCCACAATGGACAATGCGCAACATTGATGACAGAAACCGCCTACTTTTTTCTATCCTGACCATGTGCAAAGAGATACTTAGCTATCTTCCAAAAGTCGTTGGAATTGATTTTGTGGAGCTAGCCCTCTGGGCCAAGGAAAATACAGTGACTCTGGACAACCAATCGAGCACCCAAGATGGACAAGAAAAATCTGTCACAACTCAAACTGAGAGGAAAGTAACTGTAACTGTTGAAAATGATCTTGGGTCCCAAGCAAAGGATGAAGAGGAAGACATGGAGGCACTTCTTGACACATATGTCATGGGCATAGGTGAAGCAGATGCTTTCTCTGAGAGATTGAAACAGGAACTTGTTGCTTTGGAAGCAGCCAATGTCTATCAACTACTGCAGAGTGAACCTTTAATAGATGAGGTTTTGCAGGGTCTGGATGCTGCTAGTGCAACCGTAGATGATATGGATGAGTGGTTACGCATTTTTAATATGAAGCTCAGGCATATGAGAGAAGATATTGCATCGATTGAATCACGCAACAATGGCTTGGAGATGCAGTCCGTAAATAACAAAGGACTCGTTGAAGAACTAGAAAAGTTGCTTGATCGCTTGCGAAT]


>consensus_8489#0 CCAACCCCTGCCCACCTCGTCGTCCTCCTCCTCTCCTCAGATCGGCGGCGAGCGGCGGCG GCGGCGCACGGGCGATGGCGAAGTCGAGCGCGGACGACGCCGAGCTGCGGCGCGCGTGCG CGCAGGCCGTGGCGGCTTCGGGGGCGCGCGGCGAGGAGGTGTCCTTCTCCATCCGCGTCG CCAAGGGGAGGGGCATCTTCGAGAAGCTCGGCCGCCTCGCCAAGCCCCGCGTCCTCGCGC TCACCGTTAAACAATCGACAAAAGGTGAGGCAGCCAAAGCTTTTCTCCGAGTATTGAAGT ATTCATCCGGCGCAGTACTTGAGCCAGCCAAGCTTTACAAGTTGAAACATCTCACAAAGG TTGAGGTTATTTCGAATGATCCTAGTGGTTGCACGTTTGTATTGGGGTTTGATAACCTTA GAAGTCAGAGTGTTGCCCCTCCACAATGGACAATGCGCAACATTGATGACAGAAACCGCC TACTTTTTTCTATCCTGACCATGTGCAAAGAGATACTTAGCTATCTTCCAAAAGTCGTTG GAATTGATTTTGTGGAGCTAGCCCTCTGGGCCAAGGAAAATACAGTGACTCTGGACAACC AATCGAGCACCCAAGATGGACAAGAAAAATCTGTCACAACTCAAACTGAGAGGAAAGTAA CTGTAACTGTTGAAAATGATCTTGTGTCCCAAGCAAAGGATGAAGAGGAAGACATGGAGG CACTTCTTGACACATATGTCATGGGCATAGGTGAAGCAGATGCTTTCTCTGAGAGATTGA AACAGGAACTTGTTGCTTTGGAAGCAGCCAATGTCTATNCACTACTGCAGAGTGAACCTT TAATAGATGAGGTTTTGCAGGGTCTGGATGCTGCTAGTGCAACCGTAGATGATATGGATG AGTGGTTACGCATTTTTAATATGAAGCTCAGGCATATGAGAGAAGATATTGCATCGATTG AATCACGCAACAATGGCTTGGAGATGCAGTCCGTAAATAACAAAGGACTCGTTGAAGAAC TAGAAAAGTTGCTTGATCGCTTGCGAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)