These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8489#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1048 fasta sequence [CCAACCCCTGCCCACCTCGTCGTCCTCCTCCTCTCCTCAGATCGGCGGCGAGCGGCGGCGGCGGCGCACGGGCGATGGCGAAGTCGAGCGCGGACGACGCCGAGCTGCGGCGCGCGTGCGCGCAGGCCGTGGCGGCTTCGGGGGCGCGCGGCGAGGAGGTGTCCTTCTCCATCCGCGTCGCCAAGGGGAGGGGCATCTTCGAGAAGCTCGGCCGCCTCGCCAAGCCCCGCGTCCTCGCGCTCACCGTTAAACAATCGACAAAAGGTGAGGCAGCCAAAGCTTTTCTCCGAGTATTGAAGTATTCATCCGGCGCAGTACTTGAGCCAGCCAAGCTTTACAAGTTGAAACATCTCACAAAGGTTGAGGTTATTTCGAATGATCCTAGTGGTTGCACGTTTGTATTGGGGTTTGATAACCTTAGAAGTCAGAGTGTTGCCCCTCCACAATGGACAATGCGCAACATTGATGACAGAAACCGCCTACTTTTTTCTATCCTGACCATGTGCAAAGAGATACTTAGCTATCTTCCAAAAGTCGTTGGAATTGATTTTGTGGAGCTAGCCCTCTGGGCCAAGGAAAATACAGTGACTCTGGACAACCAATCGAGCACCCAAGATGGACAAGAAAAATCTGTCACAACTCAAACTGAGAGGAAAGTAACTGTAACTGTTGAAAATGATCTTGTGTCCCAAGCAAAGGATGAAGAGGAAGACATGGAGGCACTTCTTGACACATATGTCATGGGCATAGGTGAAGCAGATGCTTTCTCTGAGAGATTGAAACAGGAACTTGTTGCTTTGGAAGCAGCCAATGTCTATNCACTACTGCAGAGTGAACCTTTAATAGATGAGGTTTTGCAGGGTCTGGATGCTGCTAGTGCAACCGTAGATGATATGGATGAGTGGTTACGCATTTTTAATATGAAGCTCAGGCATATGAGAGAAGATATTGCATCGATTGAATCACGCAACAATGGCTTGGAGATGCAGTCCGTAAATAACAAAGGACTCGTTGAAGAACTAGAAAAGTTGCTTGATCGCTTGCGAAT] [+] EMBL CB652866 [CCAACCCCTGCCCACCTCGTCGTCCTCCTCCTCTCCTCAGATCGGCGGCGAGCGGCGGCGGCGGCGCACGGGCGATGGCGAAGTCGAGCGCGGACGACGCCGAGCTGCGGCGCGCGTGCGCGCAGGCCGTGGCGGCTTCGGGGGCGCGCGGCGAGGAGGTGTCCTTCTCCATCCGCGTCGCCAAGGGGAGGGGCATCTTCGAGAAGCTCGGCCGCCTCGCCAAGCCCCGCGTCCTCGCGCTCACCGTTAAACAATCGACAAAAGGTGAGGCAGCCAAAGCTTTTCTCCGAGTATTGAAGTATTCATCCGGCGCAGTACTTGAGCCAGCCAAGCTTTACAAGTTGAAACATCTCACAAAGGTTGAGGTTATTTCGAATGATCCTAGTGGTTGCACGTTTGTATTGGGGTTTGATAACCTTAGAAGTCAGAGTGTTGCCCCTCCACAATGGACAATGCGCAACATTGATGACAGAAACCGCCTACTTTTTTCTATCCTGACCATGTGCAAAGAGATACTTAGCTATCTTCCAAAAGTCGTTGGAATTGATTTTGTGGAGCTAGCCCTCTGGGCCAAGGAAAATACAGTGACTCTGGACAACCAATCGAGCACCCAAGATGGACAAGAAAAATCTGTCACAACTCAAACTGAGAGGAAAGTAACTGTAACTGTTGAAAATGATCTTGTGTCCCAAGCAAAGGATGAAGAGGAAGACATGGAGGCACTTCTTGACACATATGTCATGGGCATACGTGAAGCAca ] [+] EMBL CB672576 [ CCGCGGCCCACCTCGTCGTCCTCCTCCTCTCCTCAGATCGGCGGCGAGCGGCGGCGGCGGCGCACGGGCGATGGCGAAGTCGAGCGCGGACGACGCCGAGCTGCGGCGCGCGTGCGCGCAGGCCGTGGCGGCTTCGGGGGCGCGCGGCGAGGAGGTGTCCTTCTCCATCCGCGTCGCCAAGGGGAGGGGCATCTTCGAGAAGCTCGGCCGCCTCGCCAAGCCCCGCGTCCTCGCGCTCACCGTTAAACAATCGACAAAAGGTGAGGCAGCCAAAGCTTTTCTCCGAGTATTGAAGTATTCATCCGGCGCAGTACTTGAGCCAGCCAAGCTTTACAAGTTGAAACATCTCACAAAGGTTGAGGTTATTTCGAATGATCCTAGTGGTTGCACGTTTGTATTGGGGTTTGATAACCTTAGAAGTCAGAGTGTTGCCCCTCCACAATGGACAATGCGCAACATTGATGACAGAAACCGCCTACTTTTTTCTATCCTGACCATGTGCAAAGAGATACTTAGCTATCTTCCAAAAGTCGTTGGAATTGATTTTGTGGAGCTAGCCCTCTGGGCCAAGGAAAATACAGTGACTCTGGACAACCAATCGAGCACCCAAGATGGACAAGAAAAATCTGTCACAACTCAAACTGAGAGGAAAGTAACTGTAACTGTTGAAAATGATCTTGTGTCCCAAGCAAAGGAT ] [+] EMBL CB651175 [ TCGTCCTCCTCCTCTCCTCAGATCGGCGGCGAGCGGCGGCGGCGGCGCACGGGCGATGGCGAAGTCGAGCGCGGACGACGCCGAGCTGCGGCGCGCGTGCGCGCAGGCCGTGGCGGCTTCGGGGGCGCGCGGCGAGGAGGTGTCCTTCTCCATCCGCGTCGCCAAGGGGAGGGGCATCTTCGAGAAGCTCGGCCGCCTCGCCAAGCCCCGCGTCCTCGCGCTCACCGTTAAACAATCGACAAAAGGTGAGGCAGCCAAAGCTTTTCTCCGAGTATTGAAGTATTCATCCGGCGCAGTACTTGAGCCAGCCAAGCTTTACAAGTTGAAACATCTCACAAAGGTTGAGGTTATTTCGAATGATCCTAGTGGTTGCACGTTTGTATTGGGGTTTGATAACCTTAGAAGTCAGAGTGTTGCCCCTCCACAATGGACAATGCGCAACATTGATGACAGAAACCGCCTACTTTTTTCTATCCTGACCATGTGCAAAGAGATACTTAGCTATCTTCCAAAAGTCGTTGGAATTGATTTTGTGGAGCTAGCCCTCTGGGCCAAGGAAAATACAGTGACTCTGGACAACCAATCGAGCACCCAAGATGGACAAGAAAAATCTGTCACAACTCAAACTGAGAGGAAAGTAACTGTAACTGTTGAAAATGATCTTGTGTCCCAAGCAAAGGATGAAGAGGAAGACATGGAGGCACTTCTTGACACATATGTCATGGGCATAGGTGAAGCAGATGCTTTCTCTGAGAGATTGAAACAGGAACTTGTTGCTTTGGAAGCAGCCAATGTCT ] [+] EMBL CB663386 [ CCTCCTCCTCTCCTCAGATCGGCGGCGAGCGGCGGCGGCGGCGCACGGGCGATGGCGAAGTCGAGCGCGGACGACGCCGAGCTGCGGCGCGCGTGCGCGCAGGCCGTGGCGGCTTCGGGGGCGCGCGGCGAGGAGGTGTCCTTCTCCATCCGCGTCGCCAAGGGGAGGGGCATCTTCGAGAAGCTCGGCCGCCTCGCCAAGCCCCGCGTCCTCGCGCTCACCGTTAAACAATCGACAAAAGGTGAGGCAGCCAAAGCTTTTCTCCGAGTATTGAAGTATTCATCCGGCGCAGTACTTGAGCCAGCCAAGCTTTACAAGTTGAAACATCTCACAAAGGTTGAGGTTATTTCGAATGATCCTAGTGGTTGCACGTTTGTATTGGGGTTTGATAACCTTAGAAGTCAGAGTGTTGCCCCTCCACAATGGACAATGCGCAACATTGATGACAGAAACCGCCTACTTTTTTCTATCCTGACCATGTGCAAAGAGATACTTAGCTATCTTCCAAAAGTCGTTGGAATTGATTTTGTGGAGCTAGCCCTCTGGGCCAAGGAAAATACAGTGACTCTGGACAACCAATCGAGCACCCAAGATGGACAAGAAAAATCTGTCACAACTCAAACTGAGAGGAAAGTAACTGTAACTGTTGAAAATGATCTTGTGTCCCAAGCAAAGGATGAAGAGGAAGACATGGAGGCACTTCTTGACACATATGTCATGGGCATAGGTGAAGCAGATGCTTTCTCTGAGAGATTGAAACAGGAACTTGTTGCTTTGGAAGCAGCCAATGTCTATNCACTACTGCAGAG ] [+] EMBL AY224571 [ TCGAGCGCGGACGACGCCGAGCTGCGGCGCGCGTGCGCGCAGGCCGTGGCGGCTTCGGGGGCGCGCGGCGAGGAGGTGTCCTTCTCCATCCGCGTCGCCAAGGGGAGGGGCATCTTCGAGAAGCTCGGCCGCCTCGCCAAGCCCCGCGTCCTCGCGCTCACCGTTAAACAATCGACAAAAGGTGAGGCAGCCAAAGCTTTTCTCCGAGTATTGAAGTATTCATCCGGCGCAGTACTTGAGCCAGCCAAGCTTTACAAGTTGAAACATCTCACAAAGGTTGAGGTTATTTCGAATGATCCTAGTGGTTGCACGTTTGTATTGGGGTTTGATAACCTTAGAAGTCAGAGTGTTGCCCCTCCACAATGGACAATGCGCAACATTGATGACAGAAACCGCCTACTTTTTTCTATCCTGACCATGTGCAAAGAGATACTTAGCTATCTTCCAAAAGTCGTTGGAATTGATTTTGTGGAGCTAGCCCTCTGGGCCAAGGAAAATACAGTGACTCTGGACAACCAATCGAGCACCCAAGATGGACAAGAAAAATCTGTCACAACTCAAACTGAGAGGAAAGTAACTGTAACTGTTGAAAATGATCTTGGGTCCCAAGCAAAGGATGAAGAGGAAGACATGGAGGCACTTCTTGACACATATGTCATGGGCATAGGTGAAGCAGATGCTTTCTCTGAGAGATTGAAACAGGAACTTGTTGCTTTGGAAGCAGCCAATGTCTATCAACTACTGCAGAGTGAACCTTTAATAGATGAGGTTTTGCAGGGTCTGGATGCTGCTAGTGCAACCGTAGATGATATGGATGAGTGGTTACGCATTTTTAATATGAAGCTCAGGCATATGAGAGAAGATATTGCATCGATTGAATCACGCAACAATGGCTTGGAGATGCAGTCCGTAAATAACAAAGGACTCGTTGAAGAACTAGAAAAGTTGCTTGATCGCTTGCGAAT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||