Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 850 cluster # 850       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_850#0 length = 917 sequences # 2  

consensusID : consensus_850#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 917
fasta sequence
                              [ATCTGCTGAGGAGAATGGGTTTCCACAACATGTTAATCCAGCGAACGCATTATGAATTGAAAAAGGAGCTTGCGATGAATAAGAACCTTGAATATTTATGGAGGCAGAACTGGGATATAGATGAAACAACTGATATATTTGTTCATATGATGCCCTTCTATTCTTATGACATTCCACACACCTGTGGACCAGAACCAGCTATCTGCTGCCAGTTTGACTTTGCTCGAATGCGTAGCTTCAGCTATGAATCTTGCCCGTGGAGATTTGATCCAGTTGAAACAAATGCTAACAATGTGCAAGAGAGGGCAATGAAACTTCTAGATCAATACAGGAAAAAGTCTACGCTGTACAGAACAAATACACTTCTCATTCCATTGGGGGATGATTTCCGGTATGTTAGTACAGAGGAAGCAGAAGCACAGTTCCGCAATTATGAAAAGCTTTTTGATTACATAAACTCTAATCCCCATCTTAAGGCTGAAGTAAAATTTGGTACCCTGGAGGATTACTTCTCCACGCTGAGAGATGAAGCTGAAAGGATAAACTATACACGCCCTGGTGAACTGGTTTCTTCTGAGCTGCCAGGTTTTCCAACACTTTCAGGTGATTTCTTTACATATGCTGATAGAAATCAGGATTACTGGAGTGGTTACTATGTATCAAGGCCGTACTTCAAAGCAGTTGACCGAGTACTAGAACAGACACTACGTGCCTCAGAGATTCTGAGTTCTTTTGTTCTAGGATACTGTCAGAAGCTTCAATGTGTAAAACTCCCCATCAGCTTTTCTCANCAGCTAACAGCAGCTAGGAGGAACCTGGCACTCTTCCAGCATCATGATGGTGTAACTGGCACAGCTAAGGATCATGTTGTAGTGGACTATGGGACTCGAATGCACACTTCTTTGCAAGACTTGCAG]

[+] EMBL CB662086             [ATCTGCTGAGGAGAATGGGTTTCCACAACATGTTAATCCAGCGAACGCATTATGAATTGAAAAAGGAGCTTGCGATGAATAAGAACCTTGAATATTTATGGAGGCAGAACTGGGATATAGATGAAACAACTGATATATTTGTTCATATGATGCCCTTCTATTCTTATGACATTCCACACACCTGTGGACCAGAACCAGCTATCTGCTGCCAGTTTGACTTTGCTCGAATGCGTAGCTTCAGCTATGAATCTTGCCCGTGGAGATTTGATCCAGTTGAAACAAATGCTAACAATGTGCAAGAGAGGGCAATGAAACTTCTAGATCAATACAGGAAAAAGTCTACGCTGTACAGAACAAATACACTTCTCATTCCATTGGGGGATGATTTCCGGTATGTTAGTACAGAGGAAGCAGAAGCACAGTTCCGCAATTATGAAAAGCTTTTTGATTACATAAACTCTAATCCCCATCTTAAGGCTGAAGTAAAATTTGGTACCCTGGAGGATTACTTCTCCACGCTGAGAGATGAAGCTGAAAGGATAAACTATACACGCCCTGGTGAACTGGTTTCTTCTGAGCTGCCAGGTTTTCCAACACTTTCAGGTGATTTCTTTACATATGCTGATAGAAATCAGGATTACTGGAGTGGTTACTATGTATCAAGGCCGTACTTCAAAGCAGTTGACCGAGTACTAGAACAGACACTACGTGCCTCAGAGATTCTGAGTTCTTTTGTTCTAGGATACTGTCAGAAGCTTCAATGTGTAAAACTCCCCATCAGCTTTTCTCANCAGCTAACAGCAGCTAGGAGGAACCTGGCACTCTTCC                                                                                         ]
[+] EMBL CB646811             [                                                                                                                                                                                   ACCTGTGGACCAGAACCAGCTATCTGCTGCCAGTTTGACTTTGCTCGAATGCGTAGCTTCAGCTATGAATCTTGCCCGTGGAGATTTGATCCAGTTGAAACAAATGCTAACAATGTGCAAGAGAGGGCAATGAAACTTCTAGATCAATACAGGAAAAAGTCTACGCTGTACAGAACAAATACACTTCTCATTCCATTGGGGGATGATTTCCGGTATGTTAGTACAGAGGAAGCAGAAGCACAGTTCCGCAATTATGAAAAGCTTTTTGATTACATAAACTCTAATCCCCATCTTAAGGCTGAAGTAAAATTTGGTACCCTGGAGGATTACTTCTCCACGCTGAGAGATGAAGCTGAAAGGATAAACTATACACGCCCTGGTGAACTGGTTTCTTCTGAGCTGCCAGGTTTTCCAACACTTTCAGGTGATTTCTTTACATATGCTGATAGAAATCAGGATTACTGGAGTGGTTACTATGTATCAAGGCCGTACTTCAAAGCAGTTGACCGAGTACTAGAACAGACACTACGTGCCTCAGAGATTCTGAGTTCTTTTGTTCTAGGATACTGTCAGAAGCTTCAATGTGTAAAACTCCCCATCAGCTTTTCTCACAAGCTAACAGCAGCTAGGAGGAACCTGGCACTCTTCCAGCATCATGATGGTGTAACTGGCACAGCTAAGGATCATGTTGTAGTGGACTATGGGACTCGAATGCACACTTCTTTGCAAGACTTGCAG]


>consensus_850#0 ATCTGCTGAGGAGAATGGGTTTCCACAACATGTTAATCCAGCGAACGCATTATGAATTGA AAAAGGAGCTTGCGATGAATAAGAACCTTGAATATTTATGGAGGCAGAACTGGGATATAG ATGAAACAACTGATATATTTGTTCATATGATGCCCTTCTATTCTTATGACATTCCACACA CCTGTGGACCAGAACCAGCTATCTGCTGCCAGTTTGACTTTGCTCGAATGCGTAGCTTCA GCTATGAATCTTGCCCGTGGAGATTTGATCCAGTTGAAACAAATGCTAACAATGTGCAAG AGAGGGCAATGAAACTTCTAGATCAATACAGGAAAAAGTCTACGCTGTACAGAACAAATA CACTTCTCATTCCATTGGGGGATGATTTCCGGTATGTTAGTACAGAGGAAGCAGAAGCAC AGTTCCGCAATTATGAAAAGCTTTTTGATTACATAAACTCTAATCCCCATCTTAAGGCTG AAGTAAAATTTGGTACCCTGGAGGATTACTTCTCCACGCTGAGAGATGAAGCTGAAAGGA TAAACTATACACGCCCTGGTGAACTGGTTTCTTCTGAGCTGCCAGGTTTTCCAACACTTT CAGGTGATTTCTTTACATATGCTGATAGAAATCAGGATTACTGGAGTGGTTACTATGTAT CAAGGCCGTACTTCAAAGCAGTTGACCGAGTACTAGAACAGACACTACGTGCCTCAGAGA TTCTGAGTTCTTTTGTTCTAGGATACTGTCAGAAGCTTCAATGTGTAAAACTCCCCATCA GCTTTTCTCANCAGCTAACAGCAGCTAGGAGGAACCTGGCACTCTTCCAGCATCATGATG GTGTAACTGGCACAGCTAAGGATCATGTTGTAGTGGACTATGGGACTCGAATGCACACTT CTTTGCAAGACTTGCAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)