These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8515#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3404 fasta sequence [CCACCGGTCACCCCTGCAGGCCTGCAGCTGCTCCAACGGCTTTCCCCCTCCGTCACCCACTCCCTATCCGCCTATCCCATCCCAAAACCTCCTCTCCCCTCCCCCCCCGGCAGCCGCCGCCTCCAAAGTTCTCTGCTTTCGTCACCGCCAGCCTCCCTCCAAGGTATTGTTCGATCCGGAGTAGTGAGTCTATGCCCTTGTCCGGATCCGAATGGCTGCCCTGCGGATCTGCACGCCGGGTGGTGGTGCTCCGGAGGCCAGAAGAGGCAGTCTTGCTGCTGCCGGGAGCGCGGTTCAGCATGGACCGGATTTGATCGGGTTCAGTTCTTGGGTGCTGCCAATCAGCGCCGGATATGCCGTGGACCGGAGGCACGCAGCAGCTGGTGGAGTTGCCGCATGCCATGGGCTCTCGTGTGCTGACAGTGGGAGGAGGAAGAATCATCCCAGGGCAAGTCTGGTGAATGGTGTGGTTTCATCTCTGGAGGACAGTAGCGGCGGGGAGCCTGCGCTATGCGTATCTGATTCACCTGAAGACGCTAGCTCCAGTGGAAAAGTGTTGTCCGATTTGCGTCGGGACATGGTGGATGGTATTAGTGGTATTCCAAGAATTTCTGCGGGAAAGAAGAAGGGGATGAAGTTCAGGAGAAGAGGGCAGGGTGGAAATAGATTGACACGGCGTAGTGCTCCGAGGCGTGCCAGTGGAAAGAGTGGGCAAGATCAGAGGATTTTGTTGAGCGAGGATGATATTGCTGCAATTTTGTCCAGTGTTACCCATGAATCTAGCATCGAGGAGTGCAATTCTGTTCTCATCTGTCTCGAGAAGTATAGTGATAAGACAGCTCTTGGTTTCTTTGAGTGGATGAAGGCTAATGGAAAGCTGAAGGGAAATGCTGAGGCGTATCACCTAGCGCTTCAAGCGATCGCCTGGAAGGAGGATTGGGAAGCAGCTGGACAGTTGCTTCATGAAATGGTTGCTGATTCGGGTTGCGCTCTGGATGCTCAAGCATTTAATGGGCTTATATATGTTTGTGCCAAACGGAGGCTTGTTGACTGGGGAACAAAGTGGCTTCATATGATGCTTGAAAGAGATGTGCAGCCGAATGTGTCTACAGTTGGTATGCTTATGGGACTTTACCAGAGGATTGGGAACCTTCCAGAAGCTGAATTCACTTTTGCTAAAATGAGGAAATGTGGCATTAAGTGTGTTAATGCCTACTCAGCTATGGTTACTTTGTATACACGGTTAGGCCATTTTGCCAAATCTGAGGAGGTTATTACTCTAATGAATAATGATGAAGTAGTTCCGAACATGGAAAATTGGTTAGTGCGGCTAAATGCTTATTGTCAACAAGGCAAAATGGAAGAAGCTGAATTGGTATTGAAGTCCTTGGTAGATGAAGGAATTGCTCTGAATGTTGTGGCATACAATACGGTAATTACAGGTTATGGAAAAGTTTCTGACATGCAGAAGGCAATGGAAGTGTTTGATAGGCTTAAGAGTGCAGGTTTAGCTCCTGATGAAACAACCTATAGATCAATGATTGAAGGTTTTGGTAGAGCAGACAAGTACAAACAGGCAATTTTGTACTACAGGAAACTCCGAAACTCTGGATTTAAACCAAATGCATCCAACTTTTACACAATGATTAACTTGCTAGCAAGACATGATGACAGTGAAGGTGCAACAGAGATTCTCGAGGACATGCGGGCAGCAGGCTGCCAGTGTTCATCGATTGTCACTGTTCTTGTCCGAGCATATGGGTCAGTAGGAAGGATGCATAAAGTTCTTCAGATT-CTAAAAGCATGCTTCTATAAGAAGATTTTGTTTGATGCCACCTCATGCTCTATTTTAGTAACAGGATTCGTTCAAAATTCTCTAGTAGAAGAAGCTATGCGTGTTTTGCGCGAAAAGAAGTGGAAAGATTCTGATTTTGAAGACAATTTATATCATATCTTGATCTGTTCTTGCAAAGAGGCTGGCTGTTGTGATGATGCTGTCAGGATATATAATCAGATGCCTAAGTCGGCAACACATCCAAATCTGCGTATTTATTGCAGTATGATTGATGTTTTCAGCATCATGGAGAGATTCACTGATGCTGAAGCTTTATATCTTGAACTGAAAGCATCATCCTGTGTTCTTGACATGATTGCCTACAGCGTAATTGTGAGGATGTATACTAAAGCTGGGCGACCAGAAGATGCCTGTTTGGTTTTGGAAGACATGGAGAAACAAAAGGAAATAGTTCCTGATAAGTACCTTTTCCTTGACATGCTTCGGACTTACCAAAAATGTGGCCTACTCGAGAAATTATCTGATACATATTACTGGATACTAAAGAGTCAAGTTGAATTGGATGAAGCCATGTACAACTGCATTATAAACTGTTGTGGGCGGGCAATACCGGTTGATGAGCTCTCAAGAATTTTTGATGAAATGATTCAACAAGGGCACTTGGCCAACACTGTTACCCTCAATGTATTGCTAGACATATATGGAAAAGCCGGGCTTTTTAATAAGGCAGAAAAGGTATTTCTCATGGCTCGCAAGCAGGGTATGGCAGATATCATATCATACAATACCATTATTGCCGCGCATGCAAAAAATGGGGATTTTCGTAGCATGATTTATTTCGTCCAGAGGATGCAAGAGGCAGGGTTCCCT-GTTTCTCTGGAGGCGTACAACTGT-AT-GCTGGATGCTTACGGTAAGGCAGGA-CAGTTGGAGGAGTTTGCTGCTGTTCTGCAAAAAATGGAGAGAGCAGGATGCGAGTTTGATCACTATACTTACAACATTATGAT-CAATATATACGGGAGAAAGGGTTGGATCGAAGGAGTT-GCAAACGTTCTTGCGGAGCTAAAGAGCCGTGGTGGCGAGCCAGATCTGTACAGTTACAACA-CCTTGATAAAAGCATACGGGATAG-CAGGAATGCCTGAAGATGCTGTTAAACTGATGCA-GGAGATGAGGATTAAAGGCA-TTGCCGCTGA-CCGAGTAACCTATACTAACCTTATAGCTGCTCTA-CA-GAGGAATGAGAATTTCCTGGAAGCAGTTAAGTGGTCTCTCTGGATGAAGCAAACTGGAGTTGCTGCAACTCGAACATGATGTGCCTAAGAATTCAGAGTTTTGGTTGCATGCAAATTCTGGCATCCGCACACGTTTATATTTCATCTTTCAGTAGAGTACATACATACATGTGAGTGACATTGTACAGAGAACTATTTCTGATTGTTCTACACATCCTATGGGTACCGGAGATTCAGAAAAACCTCCTACCTTTCCATTCTCTTACAAGATGAAACTCAATCAGTGGATAGCAAGATAGGAACTTTTATCATACCAATCATACAATTGTAATTTTTTTACCAGAACTGGTTTGAACTTCTGATAATAATGATCAAAGATTCAT] [+] EMBL AK099808 [CCACCGGTCACCCCTGCAGGCCTGCAGCTGCTCCAACGGCTTTCCCCCTCCGTCACCCACTCCCTATCCGCCTATCCCATCCCAAAACCTCCTCTCCCCTCCCCCCCCGGCAGCCGCCGCCTCCAAAGTTCTCTGCTTTCGTCACCGCCAGCCTCCCTCCAAGGTATTGTTCGATCCGGAGTAGTGAGTCTATGCCCTTGTCCGGATCCGAATGGCTGCCCTGCGGATCTGCACGCCGGGTGGTGGTGCTCCGGAGGCCAGAAGAGGCAGTCTTGCTGCTGCCGGGAGCGCGGTTCAGCATGGACCGGATTTGATCGGGTTCAGTTCTTGGGTGCTGCCAATCAGCGCCGGATATGCCGTGGACCGGAGGCACGCAGCAGCTGGTGGAGTTGCCGCATGCCATGGGCTCTCGTGTGCTGACAGTGGGAGGAGGAAGAATCATCCCAGGGCAAGTCTGGTGAATGGTGTGGTTTCATCTCTGGAGGACAGTAGCGGCGGGGAGCCTGCGCTATGCGTATCTGATTCACCTGAAGACGCTAGCTCCAGTGGAAAAGTGTTGTCCGATTTGCGTCGGGACATGGTGGATGGTATTAGTGGTATTCCAAGAATTTCTGCGGGAAAGAAGAAGGGGATGAAGTTCAGGAGAAGAGGGCAGGGTGGAAATAGATTGACACGGCGTAGTGCTCCGAGGCGTGCCAGTGGAAAGAGTGGGCAAGATCAGAGGATTTTGTTGAGCGAGGATGATATTGCTGCAATTTTGTCCAGTGTTACCCATGAATCTAGCATCGAGGAGTGCAATTCTGTTCTCATCTGTCTCGAGAAGTATAGTGATAAGACAGCTCTTGGTTTCTTTGAGTGGATGAAGGCTAATGGAAAGCTGAAGGGAAATGCTGAGGCGTATCACCTAGCGCTTCAAGCGATCGCCTGGAAGGAGGATTGGGAAGCAGCTGGACAGTTGCTTCATGAAATGGTTGCTGATTCGGGTTGCGCTCTGGATGCTCAAGCATTTAATGGGCTTATATATGTTTGTGCCAAACGGAGGCTTGTTGACTGGGGAACAAAGTGGCTTCATATGATGCTTGAAAGAGATGTGCAGCCGAATGTGTCTACAGTTGGTATGCTTATGGGACTTTACCAGAGGATTGGGAACCTTCCAGAAGCTGAATTCACTTTTGCTAAAATGAGGAAATGTGGCATTAAGTGTGTTAATGCCTACTCAGCTATGGTTACTTTGTATACACGGTTAGGCCATTTTGCCAAATCTGAGGAGGTTATTACTCTAATGAATAATGATGAAGTAGTTCCGAACATGGAAAATTGGTTAGTGCGGCTAAATGCTTATTGTCAACAAGGCAAAATGGAAGAAGCTGAATTGGTATTGAAGTCCTTGGTAGATGAAGGAATTGCTCTGAATGTTGTGGCATACAATACGGTAATTACAGGTTATGGAAAAGTTTCTGACATGCAGAAGGCAATGGAAGTGTTTGATAGGCTTAAGAGTGCAGGTTTAGCTCCTGATGAAACAACCTATAGATCAATGATTGAAGGTTTTGGTAGAGCAGACAAGTACAAACAGGCAATTTTGTACTACAGGAAACTCCGAAACTCTGGATTTAAACCAAATGCATCCAACTTTTACACAATGATTAACTTGCTAGCAAGACATGATGACAGTGAAGGTGCAACAGAGATTCTCGAGGACATGCGGGCAGCAGGCTGCCAGTGTTCATCGATTGTCACTGTTCTTGTCCGAGCATATGGGTCAGTAGGAAGGATGCATAAAGTTCTTCAGATT CTAAAAGCATGCTTCTATAAGAAGATTTTGTTTGATGCCACCTCATGCTCTATTTTAGTAACAGGATTCGTTCAAAATTCTCTAGTAGAAGAAGCTATGCGTGTTTTGCGCGAAAAGAAGTGGAAAGATTCTGATTTTGAAGACAATTTATATCATATCTTGATCTGTTCTTGCAAAGAGGCTGGCTGTTGTGATGATGCTGTCAGGATATATAATCAGATGCCTAAGTCGGCAACACATCCAAATCTGCGTATTTATTGCAGTATGATTGATGTTTTCAGCATCATGGAGAGATTCACTGATGCTGAAGCTTTATATCTTGAACTGAAAGCATCATCCTGTGTTCTTGACATGATTGCCTACAGCGTAATTGTGAGGATGTATACTAAAGCTGGGCGACCAGAAGATGCCTGTTTGGTTTTGGAAGACATGGAGAAACAAAAGGAAATAGTTCCTGATAAGTACCTTTTCCTTGACATGCTTCGGACTTACCAAAAATGTGGCCTACTCGAGAAATTATCTGATACATATTACTGGATACTAAAGAGTCAAGTTGAATTGGATGAAGCCATGTACAACTGCATTATAAACTGTTGTGGGCGGGCAATACCGGTTGATGAGCTCTCAAGAATTTTTGATGAAATGATTCAACAAGGGCACTTGGCCAACACTGTTACCCTCAATGTATTGCTAGACATATATGGAAAAGCCGGGCTTTTTAATAAGGCAGAAAAGGTATTTCTCATGGCTCGCAAGCAGGGTATGGCAGATATCATATCATACAATACCATTATTGCCGCGCATGCAAAAAATGGGGATTTTCGTAGCATGATTTATTTCGTCCAGAGGATGCAAGAGGCAGGGTTCCCT GTTTCTCTGGAGGCGTACAACTGT AT GCTGGATGCTTACGGTAAGGCAGGA CAGTTGGAGGAGTTTGCTGCTGTTCTGCAAAAAATGGAGAGAGCAGGATGCGAGTTTGATCACTATACTTACAACATTATGAT CAATATATACGGGAAAAAGGGTTGGATCGAAGGAGTT GCAAACGTTCTTGCGGAGCTAAAGAGCCGTGGTGGCGAGCCAGATCTGTACAGTTACAACA CCTTGATAAAAGCATACGGGATAG CAGGAATGCCTGAAGATGCTGTTAAACTGATGCA GGAGATGAGGATTAAAGGCA TTGCCGCTGA CCGAGTAACCTATACTAACCTTATAGCTGCTCTA CA GAGGAATGAGAATTTCCTGGAAGCAGTTAAGTGGTCTCTCTGGATGAAGCAAACTGGAGTTGCTGCAACTCGAACATGATGTGCCTAAGAATTCAGAGTTTTGGTTGCATGCAAATTCTGGCATCCGCACACGTTTATATTTCATCTTTCAGTAGAGTACATACATACATGTGAGTGACATTGTACAGAGAACTATTTCTGATTGTTCTACACATCCTATGGGTACCGGAGATTCAGAAAAACCTCCTACCTTTCCATTCTCTTACAAGATGAAACTCAATCAGTGGATAGCAAGATAGGAACTTTTATCATACCAATCATACAATTGTAATTTTTTTACCAGAACTGGTTTGAACTTCTGATAATAATGATCAAAGATTCAT] [+] EMBL AK066315 [ CAATTTTGTCCAGTGTTACCCATGAATCTAGCATCGAGGAGTGCAATTCTGTTCTCATCTGTCTCGAGAAGCATAGTGATAAGACAGCTCTTGGTTTCTTTGAGTGGATGAAGGCTAATGGAAAGCTGAAGGGAAATGCTGAGGCGTATCACCTAGCGCTTCAAGCGATCGCCTGGAAGGAGGATTGGGAAGCAGCTGGACAGTTGCTTCATGAAATGGTTGCTGATTCGGGTTGCGCTCTGGATGCTCAAGCATTTAATGGGCTTATATATGTTTGTGCCAAACGGAGGCTTGTTGACTGGGGAACAAAGTGGCTTCATATGATGCTTGAAAGAGATGTGCAGCCGAATGTGTCTACAGTTGGTATGCTTATGGGACTTTACCAGAGGATTGGGAACCTTCCAGAAGCTGAATTCACTTTTGCTAAAATGAGGAAATGTGGCATTAAGTGTGTTAATGCCTACTCAGCTATGGTTACTTTGTATACACGGTTAGGCCATTTTGCCAAATCTGAGGAGGTTATTACTCTAATGAATAATGATGAAGTAGTTCCGAACATGGAAAATTGGTTAGTGCGGCTAAATGCTTATTGTCAACAAGGCAAAATGGAAGAAGCTGAATTGGTATTGAAGTCCTTGGTAGATGAAGGAATTGCTCTGAATGTTGTGGCATACAATACGGTAATTACAGGTTATGGAAAAGTTTCTGACATGCAGAAGGCAATGGAAGTGTTTGATAGGCTTAAGAGTGCAGGTTTAGCTCCTGATGAAACAACCTATAGATCAATGATTGAAGGTTTTGGTAGAGCAGACAAATACAAACAGGCAATTTTGTACTACAGGAAACTCCGAAACTCTGGATTTAAACCAAATGCATCCAACTTTTACACAATGATTAACTTGCTAGCAAGACATGATGACAGTGAAGGTGCAACAGAGATTCTCGAGGACATGCGGGCAGCAGGCTGCCAGTGTTCATCGATTGTCACTGTTCTTGTCCGAGCATATGGGTCAGTAGGAAGGATGCATAAAGTTCTTCAGATTCCAAAAAGCATGCTTCTATAAGAAGATTTTGTTTGATGCCACCTCATGCTCTATTTTAGTAACAGGATTCGTTCAAAATTCTCTAGTAGAAGAAGCTATGCGTGTTTTGCGCGAAAAGAAGTGGAAAGATTCTGATTTTGAAGACAATTTATATCATATCTTGATCTGTTCTTGCAAAGAGGCTGGCTGTTGTGATGATGCTGTCAGGATATATAATCAGATGCCTAAGTCGGCAACACATCCAAATCTGCGTATTTATTGCAGTATGATTGATGTTTTCAGCATCATGGAGAGATTCACTGATGCTGAAGCTTTATATCTTGAACTGAAAGCATCATCCTGTGTTCTTGACATGATTGCCTACAGCGTAATTGTGAGGATGTATACTAAAGCTGGGCGACCAGAAGATGCCTGTTTGGTTTTGGAAGACATGGAGAAACAAAAGGAAATAGTTCCTGATAAGTACCTTTTCCTTGACATGCTTCGGACTTACCAAAAATGTGGCCTACTCGAGAAATTATCTGATACATATTACTGGATACTAAAGAGTCAAGTTGAATTGGATGAAGCCATGTACAACTGCATTATAAACTGTTGTGGGCGGGCAATACCGGTTGATGAGCTCTCAAGAATTTTTGATGAAATGATTCAACAAGGGCATTTGGCCAACACTGTTACCCTCAATGTATTGCTAGACATATATGGAAAAGCCGGGCTTTTTAATAAGGCAGAAAAGGTATTTCTCATGGCTCGCAAGCAGGGTATGGCAGATATCATATCATACAATACCATTATTGCCGCGCATGCAAAAAATGGGGATTTTCGTAGCATGATTTATTTCGTCCAGAGGATGCAAGAGGCAGGGTTCCCT GTTTCTCTGGAGGCGTACAACTGT AT GCTGGATGCTTACGGTAAGGCAGGA CAGTTGGAGGAGTTTGCTGCTGTTCTGCAAAAAATGGAGAGAGCAGGATGCGAGTTTGATCACTATACTTACAACATTATGAT CAATATATACGGGAGAAAGGGTTGGATCGAAGGAGTT GCAAACGTTCTTGCGGAGCTAAAGAGCCGTGGTGGCGAGCCAGATCTGTACAGTTACAACA CCTTGATAAAAGCATACGGGATAG CAGGAATGCCTGAAGATGCTGTTAAACTGATGCA GGAGATGAGGATTAAAGGCA TTGCCGCTGA CCGAGTAACCTATACTAACCTTATAGCTGCTCTA CA GAGGAATGAGAATTTCCTGGAAGCAGTTAAGTGGTCTCTCTGGATGAAGCAAACTGGAGTTGCTGCAACTCGAACATGATGTGCCTAAGAATTCAGAGTTTTGGTTGCATGCAAATTCTGGCATCCGCACACGTTTATATTTCATCTTTCAGTAGAGTACATACATACATGTGAGTGACATTGTACAGAGAACTATTTCTGATTGTTCTACACATCCTATGGGTA ] [+] EMBL AK072601 [ ATGATTTATTTCGTCCAGAGGATGCAAGAGGCAGGGTTCCCT GTTTCTCTGGAGGCGTACAACTGT AT GCTGGATGCTTACGGTAAGGCAGGA CAGTTGGAGGAGTTTGCTGCTGTTCTGCAAAAAATGGAGAGAGCAGGATGCGAGTTTGATCACTATACTTACAACATTATGAT CAATATATACGGGAGAAAGGGTTGGATCGAAGGAGTT GCAAACGTTCTTGCGGAGCTAAAGAGCCGTGGTGGCGAGCCAGATCTGTACAGTTACAACA CCTTGATAAAAGCATACGGGATAG CAGGAATGCCTGAAGATGCTGTTAAACTGATGCA GGAGATGAGGATTAAAGGCA TTGCCGCTGA CCGAGTAACCTATACTAACCTTATAGCTGCTCTA CA GAGGAATGAGAATTTCCTGGAAGCAGTTAAGTGGTCTCTCTGGATGAAGCAAACTGGAGTTGCTGCAACTCGAACATGATGTGCCTAAGAATTCAGAGTTTTGGTTGCATGCAAATTCTGGCATCCGCACACGTTTATATTTCATCTTTCAGTAGAGTACATACATACATGTGAGTGACATTGTACAGAGAACTATTTCTGATTGTTCTACACATCCTATGGGTACCGGAGATTCAGAAAAACCTCCTACCTTTCCATTCTCTTACAAGATGAAACTCAATCAGTGGATAGCAAGATAGGAACTTTTATCATACCAATCATACAATTGTAATTTTTTTACCAGAACTGGTTTGAACTTCTGATAATAATGATCAAAGATTCAT] [+] EMBL BI802315 [ GCAAGAGCCAGGGTTCCCTGGTTTCTCTGGAGGCGTACAACTGTGATGGCTGGATGCTTACGGTAAGCCAGCACCAGTTGGAGGAGTTTGCTGCTGTTCTGCCAAAAATGGAGAGACCAGGATGCGAGTTTGATCACTATACTTACAACATTATGATCCAATATATACGGGAGAAAGGGTTGGATCGAAGGAGTTCGCAAACGTTCTTGCGGAGCTAAAGA CCGTGGTGGCGAGCCAGATCTGTACAGTTACAACACCCTTGATAAAAGCATACGGGATAGCCAGGAATGCCTGAAGATGCTGTTAAACTGATGCACGGAGATGAGGATTAAAGGCACTTCCCCCTGACCCGAGTAACCTATACTAACCTTATAGCTGCTCTACCACGAGGAATGAGAATTTCCTGGAA CAGTTAAGTGGTCTCTCTGGATGAACCCAACTGGAGTT CTCCAACTCGAACATGATG GCCTAAGAATTCAGA TTTT GTTCCACCCAAAa ] consensusID : consensus_8515#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 579 fasta sequence [AGAGGAGACAAGGGGGCAAGAGGCAGGGTTCCCTGTTTCTCTGGAGGCGTACAACTGTATGCTGGATGCTTACGGTAAGGCAGGACAGTTGGAGGAGTTTGCTGCTGTTCTGCAAAAAATGGAGAGAGTAGGATGCGAGTTTGATCACTATACTTACAACATTATGATCAATATATACGGGAGAAAGGGTTGGATCGAAGGAGTTGCAAACGTTCTTGCGGAGCTAAAGAGCCGTGGTGGCGAGCCAGATCTGTACAGTTACAACACCTTGATAAAAGCATACGGGATAGCAGGAATGCCTGAAGATGCTGTTAAACTGATGCAGGAGATGAGGATTAAAGGCATTGCCGCTGACCGAGTAACCTATACTAACCTTATAGCTGCTCTACAGAGGAATGAGAATTTCCTGGAAGCAGTTAAGTGGTCTCTCTGGATGAAGCAAACTGGAGTTGCTGCAACTCGAACATGATGTGCCTAAGAATTTAGAGTTTTGGTTGCATGCAAATTCTGGCTGGATTTTTCACATTTTGGTCTTTTTGAAAAACTTATTTCGCAAGTAGACTCTTAGAAAAAAAAAAA] [-] EMBL CA762652 [AGAGGAGACAAGGGGGCAAGAGGCAGGGTTCCCTGTTTCTCTGGAGGCGTACAACTGTATGCTGGATGCTTACGGTAAGGCAGGACAGTTGGAGGAGTTTGCTGCTGTTCTGCAAAAAATGGAGAGAGTAGGATGCGAGTTTGATCACTATACTTACAACATTATGATCAATATATACGGGAGAAAGGGTTGGATCGAAGGAGTTGCAAACGTTCTTGCGGAGCTAAAGAGCCGTGGTGGCGAGCCAGATCTGTACAGTTACAACACCTTGATAAAAGCATACGGGATAGCAGGAATGCCTGAAGATGCTGTTAAACTGATGCAGGAGATGAGGATTAAAGGCATTGCCGCTGACCGAGTAACCTATACTAACCTTATAGCTGCTCTACAGAGGAATGAGAATTTCCTGGAAGCAGTTAAGTGGTCTCTCTGGATGAAGCAAACTGGAGTTGCTGCAACTCGAACATGATGTGCCTAAGAATTTAGAGTTTTGGTTGCATGCAAATTCTGGCTGGATTTTTCACATTTTGGTCTTTTTGAAAAACTTATTTCGCAAGTAGACTCTTAGAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8515#0 CCACCGGTCACCCCTGCAGGCCTGCAGCTGCTCCAACGGCTTTCCCCCTCCGTCACCCAC 60 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 TCCCTATCCGCCTATCCCATCCCAAAACCTCCTCTCCCCTCCCCCCCCGGCAGCCGCCGC 120 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 CTCCAAAGTTCTCTGCTTTCGTCACCGCCAGCCTCCCTCCAAGGTATTGTTCGATCCGGA 180 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 GTAGTGAGTCTATGCCCTTGTCCGGATCCGAATGGCTGCCCTGCGGATCTGCACGCCGGG 240 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 TGGTGGTGCTCCGGAGGCCAGAAGAGGCAGTCTTGCTGCTGCCGGGAGCGCGGTTCAGCA 300 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 TGGACCGGATTTGATCGGGTTCAGTTCTTGGGTGCTGCCAATCAGCGCCGGATATGCCGT 360 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 GGACCGGAGGCACGCAGCAGCTGGTGGAGTTGCCGCATGCCATGGGCTCTCGTGTGCTGA 420 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 CAGTGGGAGGAGGAAGAATCATCCCAGGGCAAGTCTGGTGAATGGTGTGGTTTCATCTCT 480 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 GGAGGACAGTAGCGGCGGGGAGCCTGCGCTATGCGTATCTGATTCACCTGAAGACGCTAG 540 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 CTCCAGTGGAAAAGTGTTGTCCGATTTGCGTCGGGACATGGTGGATGGTATTAGTGGTAT 600 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 TCCAAGAATTTCTGCGGGAAAGAAGAAGGGGATGAAGTTCAGGAGAAGAGGGCAGGGTGG 660 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 AAATAGATTGACACGGCGTAGTGCTCCGAGGCGTGCCAGTGGAAAGAGTGGGCAAGATCA 720 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 GAGGATTTTGTTGAGCGAGGATGATATTGCTGCAATTTTGTCCAGTGTTACCCATGAATC 780 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 TAGCATCGAGGAGTGCAATTCTGTTCTCATCTGTCTCGAGAAGTATAGTGATAAGACAGC 840 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 TCTTGGTTTCTTTGAGTGGATGAAGGCTAATGGAAAGCTGAAGGGAAATGCTGAGGCGTA 900 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 TCACCTAGCGCTTCAAGCGATCGCCTGGAAGGAGGATTGGGAAGCAGCTGGACAGTTGCT 960 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 TCATGAAATGGTTGCTGATTCGGGTTGCGCTCTGGATGCTCAAGCATTTAATGGGCTTAT 1020 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 ATATGTTTGTGCCAAACGGAGGCTTGTTGACTGGGGAACAAAGTGGCTTCATATGATGCT 1080 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 TGAAAGAGATGTGCAGCCGAATGTGTCTACAGTTGGTATGCTTATGGGACTTTACCAGAG 1140 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 GATTGGGAACCTTCCAGAAGCTGAATTCACTTTTGCTAAAATGAGGAAATGTGGCATTAA 1200 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 GTGTGTTAATGCCTACTCAGCTATGGTTACTTTGTATACACGGTTAGGCCATTTTGCCAA 1260 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 ATCTGAGGAGGTTATTACTCTAATGAATAATGATGAAGTAGTTCCGAACATGGAAAATTG 1320 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 GTTAGTGCGGCTAAATGCTTATTGTCAACAAGGCAAAATGGAAGAAGCTGAATTGGTATT 1380 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 GAAGTCCTTGGTAGATGAAGGAATTGCTCTGAATGTTGTGGCATACAATACGGTAATTAC 1440 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 AGGTTATGGAAAAGTTTCTGACATGCAGAAGGCAATGGAAGTGTTTGATAGGCTTAAGAG 1500 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 TGCAGGTTTAGCTCCTGATGAAACAACCTATAGATCAATGATTGAAGGTTTTGGTAGAGC 1560 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 AGACAAGTACAAACAGGCAATTTTGTACTACAGGAAACTCCGAAACTCTGGATTTAAACC 1620 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 AAATGCATCCAACTTTTACACAATGATTAACTTGCTAGCAAGACATGATGACAGTGAAGG 1680 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 TGCAACAGAGATTCTCGAGGACATGCGGGCAGCAGGCTGCCAGTGTTCATCGATTGTCAC 1740 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 TGTTCTTGTCCGAGCATATGGGTCAGTAGGAAGGATGCATAAAGTTCTTCAGATTCTAAA 1800 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 AGCATGCTTCTATAAGAAGATTTTGTTTGATGCCACCTCATGCTCTATTTTAGTAACAGG 1860 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 ATTCGTTCAAAATTCTCTAGTAGAAGAAGCTATGCGTGTTTTGCGCGAAAAGAAGTGGAA 1920 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 AGATTCTGATTTTGAAGACAATTTATATCATATCTTGATCTGTTCTTGCAAAGAGGCTGG 1980 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 CTGTTGTGATGATGCTGTCAGGATATATAATCAGATGCCTAAGTCGGCAACACATCCAAA 2040 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 TCTGCGTATTTATTGCAGTATGATTGATGTTTTCAGCATCATGGAGAGATTCACTGATGC 2100 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 TGAAGCTTTATATCTTGAACTGAAAGCATCATCCTGTGTTCTTGACATGATTGCCTACAG 2160 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 CGTAATTGTGAGGATGTATACTAAAGCTGGGCGACCAGAAGATGCCTGTTTGGTTTTGGA 2220 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 AGACATGGAGAAACAAAAGGAAATAGTTCCTGATAAGTACCTTTTCCTTGACATGCTTCG 2280 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 GACTTACCAAAAATGTGGCCTACTCGAGAAATTATCTGATACATATTACTGGATACTAAA 2340 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 GAGTCAAGTTGAATTGGATGAAGCCATGTACAACTGCATTATAAACTGTTGTGGGCGGGC 2400 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 AATACCGGTTGATGAGCTCTCAAGAATTTTTGATGAAATGATTCAACAAGGGCACTTGGC 2460 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 CAACACTGTTACCCTCAATGTATTGCTAGACATATATGGAAAAGCCGGGCTTTTTAATAA 2520 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 GGCAGAAAAGGTATTTCTCATGGCTCGCAAGCAGGGTATGGCAGATATCATATCATACAA 2580 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 TACCATTATTGCCGCGCATGCAAAAAATGGGGATTTTCGTAGCATGATTTATTTCGTCCA 2640 consensus_8515#1 --------------------------------------------------AGAGGAGACA 10 * ** consensus_8515#0 GAGGATGCAAGAGGCAGGGTTCCCTGTTTCTCTGGAGGCGTACAACTGTATGCTGGATGC 2700 consensus_8515#1 AGGGG-GCAAGAGGCAGGGTTCCCTGTTTCTCTGGAGGCGTACAACTGTATGCTGGATGC 69 ** ****************************************************** consensus_8515#0 TTACGGTAAGGCAGGACAGTTGGAGGAGTTTGCTGCTGTTCTGCAAAAAATGGAGAGAGC 2760 consensus_8515#1 TTACGGTAAGGCAGGACAGTTGGAGGAGTTTGCTGCTGTTCTGCAAAAAATGGAGAGAGT 129 *********************************************************** consensus_8515#0 AGGATGCGAGTTTGATCACTATACTTACAACATTATGATCAATATATACGGGAGAAAGGG 2820 consensus_8515#1 AGGATGCGAGTTTGATCACTATACTTACAACATTATGATCAATATATACGGGAGAAAGGG 189 ************************************************************ consensus_8515#0 TTGGATCGAAGGAGTTGCAAACGTTCTTGCGGAGCTAAAGAGCCGTGGTGGCGAGCCAGA 2880 consensus_8515#1 TTGGATCGAAGGAGTTGCAAACGTTCTTGCGGAGCTAAAGAGCCGTGGTGGCGAGCCAGA 249 ************************************************************ consensus_8515#0 TCTGTACAGTTACAACACCTTGATAAAAGCATACGGGATAGCAGGAATGCCTGAAGATGC 2940 consensus_8515#1 TCTGTACAGTTACAACACCTTGATAAAAGCATACGGGATAGCAGGAATGCCTGAAGATGC 309 ************************************************************ consensus_8515#0 TGTTAAACTGATGCAGGAGATGAGGATTAAAGGCATTGCCGCTGACCGAGTAACCTATAC 3000 consensus_8515#1 TGTTAAACTGATGCAGGAGATGAGGATTAAAGGCATTGCCGCTGACCGAGTAACCTATAC 369 ************************************************************ consensus_8515#0 TAACCTTATAGCTGCTCTACAGAGGAATGAGAATTTCCTGGAAGCAGTTAAGTGGTCTCT 3060 consensus_8515#1 TAACCTTATAGCTGCTCTACAGAGGAATGAGAATTTCCTGGAAGCAGTTAAGTGGTCTCT 429 ************************************************************ consensus_8515#0 CTGGATGAAGCAAACTGGAGTTGCTGCAACTCGAACATGATGTGCCTAAGAATTCAGAGT 3120 consensus_8515#1 CTGGATGAAGCAAACTGGAGTTGCTGCAACTCGAACATGATGTGCCTAAGAATTTAGAGT 489 ****************************************************** ***** consensus_8515#0 TTTGGTTGCATGCAAATTCTGGCATCCGCACACGTTTATATTTCATCTTTCAGTAGAGTA 3180 consensus_8515#1 TTTGGTTGCATGCAAATTCTGGC---TGGATTT-TTCACATTTTGGTCTTTT-TGAAAAA 544 *********************** * * ** * **** ** * * * consensus_8515#0 CATACATACATGTGAGTGACATTGTACAGAGAACTATTTCTGATTGTTCTACACATCCTA 3240 consensus_8515#1 CTTATTT---CGCAAGTAGACTCTTAGAAAAAAAAAAA---------------------- 579 * ** * * *** * ** * * ** * consensus_8515#0 TGGGTACCGGAGATTCAGAAAAACCTCCTACCTTTCCATTCTCTTACAAGATGAAACTCA 3300 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 ATCAGTGGATAGCAAGATAGGAACTTTTATCATACCAATCATACAATTGTAATTTTTTTA 3360 consensus_8515#1 ------------------------------------------------------------ consensus_8515#0 CCAGAACTGGTTTGAACTTCTGATAATAATGATCAAAGATTCAT 3404 consensus_8515#1 -------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||