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Oryza sativa
cluster # 8530 cluster # 8530       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8530#0 length = 1942 sequences # 3  
consensus_8530#1 length = 1903 sequences # 2  

consensusID : consensus_8530#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1942
fasta sequence
                              [GATGCAGACGTGTTCTTGTCTCACCCTTCACCTGCATGATCCTCTCTTTTTCAATCCCTCGATCCACTCATCTCTCCTGGCTAAGAATCAATCTCTTCTTCACATCAATATCGGAGTGATCGATCAGTCTCGTCGCGGTTCGATCGATTGGCCTCTGATCCGTACATCTTCTTGTGTGATCGATCAAGAATCATTCAAGATTGCAAGGTGAGTAAGTATGGCGAGTGATGGCCACCTCGCGGCGCCGCTCCTCGACGGCGGCGGCGGGGTGGACGACGCGGCGCTTCTCCGGCGGCTCTACGTGGGGCACTTCCTGGCGAGGTGGGGCGCGAGGATGTGGGAGTTCTCGGTGGGGCTCTACATGATCCGAATCTGGCCGGGCTCGCTGTTGCTCACGGCGGTGTACGGCGTCGTGGAGGCCTCCGCCGTGGCGGCGCTGGGCCCCATCGTCGGCGCCGTCGTCGACAGGCTCGCATACCTGCAGGTGCTCAGGCTGTGGCTGCTGCTGCAGGGCGCGTCTTTCGTCGCCGCCGGCGTCTCCGTCACGGCGCTGCTCGTCTACGGCGCCCGGCTCGCCGCCGCGGGGTTCCCGGCGTTCGTGGCGCTCGTCGTCGTCACCAACGTCTCCGGCGCGCTCGCCGCGCTCTCCACCCTCGCTGGCACCATACTGATCGAGAGAGAATGGGTGGTGGTGATCGCCGGCGGGCAACCGGCGGCGGTGCTGACGGGGATCAACTCGGTGATCCGGCGGATCGACCTGAGCTGCAAGCTGCTGGCGCCGGTGCTGTCCGGGTTCTTCATCAGCTTCGTGTCCATGGAGGCCTCCGCGGCGGCGCTGGCGGCGTGGAACCTCGCCGCCGTGTGGGTCCAGTACTGGCTCTTCGTCTCCGTCTACGCCGGCTTCCCGGCGCTCAGCGAGACCAGCCAGATCTCAAGACGGCGCGCCGACGATGACGAGGCAGCGGCGGCGGCGCAGCCGCAGAAGGTGGAGCGGCTGTGGATGACGATGCTGCCGTGCTGGGAGTCGTGGGCGGTGTACGCGCGGCAGGAGGTGGTGCTCCCCGGCGTGGCGCTCGCGTTCCTCTACTTCACCGTGCTGAGCTTCGGGACGCTGATGACGGCGACGCTGGACTGGGAGGGGATCCCGGCATACGTGATCAGCCTCGCCCGCGGCGTCAGCGCCGCCGTCGGCATCGCCGCGACGTGGGTGTACCCGGCGGCGCACGCCCGCGTGTCCACGCTCCGCGCGGGCCTCTGGTCCATCTGGGCGCAGTGGTGCTGCCTCCTCGTCTGCGTCGCCTCCGTCTGGGCCGGCGGCGCCGCGCCATTGGCGTCGGCGTGGATGCTGATGGGCGGCGTGGCGGCGTCGCGGCTGGGGCTGTGGATGTTCGACCTAGCCGTGATGCAGCTGATGCAGGACGGCGTCCCGGAGAGCGACCGGTGCGTCGTCGGCGGCGTGCAGAACTCGCTGCAGTCCATGTTCGACCTGCTCACCTACGTCATGGGCATCATCGTCTCCGACCCCAGGGATTTCGGCGAGCTGATCGTGCTGTCCTTCTTTCTCGTGACCTGCGCGGCGGCAATGTACACGATGCATGTGTACCGGGTGAGGAAGCATCTGTTCCATCTCGACAGGATCCTGCCCAAGATGAACTGGATCAAAGCTTCTTGATATGGCATCCCGTGATCGATAATGATGATTCATCAGTGATTTTCTCCAGCAAATTAGTACTGATCAATGCTGGATACTGTACAATTATCTGCTTTGGTTTACTTCAATTTTAGACCTGTTCACTGGAACTTTTGCTCAAAAGATTTGTGGCATCTGGAGAAATGCCACATGTTCCATCCAACTGGGGCTTGAAGAATCTCCATGTAATTAACCTTACAATAATATATAAGTACTCGCTTGATCCCATGATTAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK063490             [GATGCAGACGTGTTCTTGTCTCACCCTTCACCTGCATGATCCTCTCTTTTTCAATCCCTCGATCCACTCATCTCTCCTGGCTAAGAATCAATCTCTTCTTCACATCAATATCGGAGTGATCGATCAGTCTCGTCGCGGTTCGATCGATTGGCCTCTGATCCGTACATCTTCTTGTGTGATCGATCAAGAATCATTCAAGATTGCAAGGTGAGTAAGTATGGCGAGTGATGGCCACCTCGCGGCGCCGCTCCTCGACGGCGGCGGCGGGGTGGACGACGCGGCGCTTCTCCGGCGGCTCTACGTGGGGCACTTCCTGGCGAGGTGGGGCGCGAGGATGTGGGAGTTCTCGGTGGGGCTCTACATGATCCGAATCTGGCCGGGCTCGCTGTTGCTCACGGCGGTGTACGGCGTCGTGGAGGCCTCCGCCGTGGCGGCGCTGGGCCCCATCGTCGGCGCCGTCGTCGACAGGCTCGCATACCTGCAGGTGCTCAGGCTGTGGCTGCTGCTGCAGGGCGCGTCTTTCGTCGCCGCCGGCGTCTCCGTCACGGCGCTGCTCGTCTACGGCGCCCGGCTCGCCGCCGCGGGGTTCCCGGCGTTCGTGGCGCTCGTCGTCGTCACCAACGTCTCCGGCGCGCTCGCCGCGCTCTCCACCCTCGCTGGCACCATACTGATCGAGAGAGAATGGGTGGTGGTGATCGCCGGCGGGCAACCGGCGGCGGTGCTGACGGGGATCAACTCGGTGATCCGGCGGATCGACCTGAGCTGCAAGCTGCTGGCGCCGGTGCTGTCCGGGTTCTTCATCAGCTTCGTGTCCATGGAGGCCTCCGCGGCGGCGCTGGCGGCGTGGAACCTCGCCGCCGTGTGGGTCCAGTACTGGCTCTTCGTCTCCGTCTACGCCGGCTTCCCGGCGCTCAGCGAGACCAGCCAGATCTCAAGACGGCGCGCCGACGATGACGAGGCAGCGGCGGCGGCGCAGCCGCAGAAGGTGGAGCGGCTGTGGATGACGATGCTGCCGTGCTGGGAGTCGTGGGCGGTGTACGCGCGGCAGGAGGTGGTGCTCCCCGGCGTGGCGCTCGCGTTCCTCTACTTCACCGTGCTGAGCTTCGGGACGCTGATGACGGCGACGCTGGACTGGGAGGGGATCCCGGCATACGTGATCAGCCTCGCCCGCGGCGTCAGCGCCGCCGTCGGCATCGCCGCGACGTGGGTGTACCCGGCGGCGCACGCCCGCGTGTCCACGCTCCGCGCGGGCCTCTGGTCCATCTGGGCGCAGTGGTGCTGCCTCCTCGTCTGCGTCGCCTCCGTCTGGGCCGGCGGCGCCGCGCCATTGGCGTCGGCGTGGATGCTGATGGGCGGCGTGGCGGCGTCGCGGCTGGGGCTGTGGATGTTCGACCTAGCCGTGATGCAGCTGATGCAGGACGGCGTCCCGGAGAGCGACCGGTGCGTCGTCGGCGGCGTGCAGAACTCGCTGCAGTCCATGTTCGACCTGCTCACCTACGTCATGGGCATCATCGTCTCCGACCCCAGGGATTTCGGCGAGCTGATCGTGCTGTCCTTCTTTCTCGTGACCTGCGCGGCGGCAATGTACACGATGCATGTGTACCGGGTGAGGAAGCATCTGTTCCATCTCGACAGGATCCTGCCCAAGATGAACTGGATCAAAGCTTCTTGATATGGCATCCCGTGATCGATAATGATGATTCATCAGTGATTTTCTCCAGCAAATTAGTACTGATCAATGCTGGATACTGTACAATTATCTGCTTTGGTTTACTTCAATTTTAGACCTGTTCACTGGAACTTTTGCTCAAAAGATTTGTGGCATCTGGAGAAATGCCACATGTTCCATCCAACTGGGGCTTGAAGAATCTCCATGTAATTAACCTTACAATAATATATAAGTACTCGCTTG                              ]
[+] EMBL AK101863             [                                                                                                 CTTCACATCAATATCGGAGTGATCGATCAGTCTCGTCGCGGTTCGATCGATTGGCCTCTGATCCGTACATCTTCTTGTGTGATCGATCAAGAATCATTCAAGATTGCAAGGTGAGTAAGTATGGCGAGTGATGGCCACCTCGCGGCGCCGCTCCTCGACGGCGGCGGCGGGGTGGACGACGCGGCGCTTCTCCGGCGGCTCTACGTGGGGCACTTCCTGGCGAGGTGGGGCGCGAGGATGTGGGAGTTCTCGGTGGGGCTCTACATGATCCGAATCTGGCCGGGCTCGCTGTTGCTCACGGCGGTGTACGGCGTCGTGGAGGCCTCCGCCGTGGCGGCGCTGGGCCCCATCGTCGGCGCCGTCGTCGACAGGCTCGCATACCTGCAGGTGCTCAGGCTGTGGCTGCTGCTGCAGGGCGCGTCTTTCGTCGCCGCCGGCGTCTCCGTCACGGCGCTGCTCGTCTACGGCGCCCGGCTCGCCGCCGCGGGGTTCCCGGCGTTCGTGGCGCTCGTCGTCGTCACCAACGTCTCCGGCGCGCTCGCCGCGCTCTCCACCCTCGCTGGCACCATACTGATCGAGAGAGAATGGGTGGTGGTGATCGCCGGCGGGCAACCGGCGGCGGTGCTGACGGGGATCAACTCGGTGATCCGGCGGATCGACCTGAGCTGCAAGCTGCTGGCGCCGGTGCTGTCCGGGTTCTTCATCAGCTTCGTGTCCATGGAGGCCTCCGCGGCGGCGCTGGCGGCGTGGAACCTCGCCGCCGTGTGGGTCCAGTACTGGCTCTTCGTCTCCGTCTACGCCGGCTTCCCGGCGCTCAGCGAGACCAGCCAGATCTCAAGACGGCGCGCCGACGATGACGAGGCAGCGGCGGCGGCGCAGCCGCAGAAGGTGGAGCGGCTGTGGATGACGATGCTGCCGTGCTGGGAGTCGTGGGCGGTGTACGCGCGGCAGGAGGTGGTGCTCCCCGGCGTGGCGCTCGCGTTCCTCTACTTCACCGTGCTGAGCTTCGGGACGCTGATGACGGCGACGCTGGACTGGGAGGGGATCCCGGCATACGTGATCAGCCTCGCCCGCGGCGTCAGCGCCGCCGTCGGCATCGCCGCGACGTGGGTGTACCCGGCGGCGCACGCCCGCGTGTCCACGCTCCGCGCGGGCCTCTGGTCCATCTGGGCGCAGTGGTGCTGCCTCCTCGTCTGCGTCGCCTCCGTCTGGGCCGGCGGCGCCGCGCCATTGGCGTCGGCGTGGATGCTGATGGGCGGCGTGGCGGCGTCGCGGCTGGGGCTGTGGATGTTCGACCTAGCCGTGATGCAGCTGATGCAGGACGGCGTCCCGGAGAGCGACCGGTGCGTCGTCGGCGGCGTGCAGAACTCGCTGCAGTCCATGTTCGACCTGCTCACCTACGTCATGGGCATCATCGTCTCCGACCCCAGGGATTTCGGCGAGCTGATCGTGCTGTCCTTCTTTCTCGTGACCTGCGCGGCGGCAATGTACACGATGCATGTGTACCGGGTGAGGAAGCATCTGTTCCATCTCGACAGGATCCTGCCCAAGATGAACTGGATCAAAGCTTCTTGATATGGCATCCCGTGATCGATAATGATGATTCATCAGTGATTTTCTCCAGCAAATTAGTACTGATCAATGCTGGATACTGTACAATTATCTGCTTTGGTTTACTTCAATTTTAGACCTGTTCACTGGAACTTTTGCTCAAAAGATTTGTGGCATCTGGAGAAATGCCACATGTTCCATCCAACTGGGGCTTGAAGAATCTCCATGTAATTAACCTTACAATAATATATAAGTACTCGCT                                ]
[+] EMBL AU184199             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGGGATTTCGGCGAGCTGATCGTGCTGTCCTTTTTTNTCGTGACCTGCGCGGCGGCAATGTACNCGATGCATGTGTACCGGGTGAGGAAGCATNTGTTCCATCTCGACAGGATCCTGCCCAAGATGAACTGGATCAAAGCTTCTTGATATGGCATCCCGTGATCGATAATGATGATTCATCAGTGATTTTCTCCAGCAAATTAGTACTGATCAATGCTGGATACTGTACAATTATCTGCTTTGGTTTACTTCAATTTTAGACCTGTTCACTGGAACTTTTGCTCAAAANATTTGTGGCATNTGGAGAAATGCCACATGTTCCATCCAACTGGGGCTTGAANAATNTCCATGTAATTAACCTTACAATAATATATAAGTACTCGCTTGATCCCATGATTAAAAAAAAAAAAAAAAAAA]


>consensus_8530#0 GATGCAGACGTGTTCTTGTCTCACCCTTCACCTGCATGATCCTCTCTTTTTCAATCCCTC GATCCACTCATCTCTCCTGGCTAAGAATCAATCTCTTCTTCACATCAATATCGGAGTGAT CGATCAGTCTCGTCGCGGTTCGATCGATTGGCCTCTGATCCGTACATCTTCTTGTGTGAT CGATCAAGAATCATTCAAGATTGCAAGGTGAGTAAGTATGGCGAGTGATGGCCACCTCGC GGCGCCGCTCCTCGACGGCGGCGGCGGGGTGGACGACGCGGCGCTTCTCCGGCGGCTCTA CGTGGGGCACTTCCTGGCGAGGTGGGGCGCGAGGATGTGGGAGTTCTCGGTGGGGCTCTA CATGATCCGAATCTGGCCGGGCTCGCTGTTGCTCACGGCGGTGTACGGCGTCGTGGAGGC CTCCGCCGTGGCGGCGCTGGGCCCCATCGTCGGCGCCGTCGTCGACAGGCTCGCATACCT GCAGGTGCTCAGGCTGTGGCTGCTGCTGCAGGGCGCGTCTTTCGTCGCCGCCGGCGTCTC CGTCACGGCGCTGCTCGTCTACGGCGCCCGGCTCGCCGCCGCGGGGTTCCCGGCGTTCGT GGCGCTCGTCGTCGTCACCAACGTCTCCGGCGCGCTCGCCGCGCTCTCCACCCTCGCTGG CACCATACTGATCGAGAGAGAATGGGTGGTGGTGATCGCCGGCGGGCAACCGGCGGCGGT GCTGACGGGGATCAACTCGGTGATCCGGCGGATCGACCTGAGCTGCAAGCTGCTGGCGCC GGTGCTGTCCGGGTTCTTCATCAGCTTCGTGTCCATGGAGGCCTCCGCGGCGGCGCTGGC GGCGTGGAACCTCGCCGCCGTGTGGGTCCAGTACTGGCTCTTCGTCTCCGTCTACGCCGG CTTCCCGGCGCTCAGCGAGACCAGCCAGATCTCAAGACGGCGCGCCGACGATGACGAGGC AGCGGCGGCGGCGCAGCCGCAGAAGGTGGAGCGGCTGTGGATGACGATGCTGCCGTGCTG GGAGTCGTGGGCGGTGTACGCGCGGCAGGAGGTGGTGCTCCCCGGCGTGGCGCTCGCGTT CCTCTACTTCACCGTGCTGAGCTTCGGGACGCTGATGACGGCGACGCTGGACTGGGAGGG GATCCCGGCATACGTGATCAGCCTCGCCCGCGGCGTCAGCGCCGCCGTCGGCATCGCCGC GACGTGGGTGTACCCGGCGGCGCACGCCCGCGTGTCCACGCTCCGCGCGGGCCTCTGGTC CATCTGGGCGCAGTGGTGCTGCCTCCTCGTCTGCGTCGCCTCCGTCTGGGCCGGCGGCGC CGCGCCATTGGCGTCGGCGTGGATGCTGATGGGCGGCGTGGCGGCGTCGCGGCTGGGGCT GTGGATGTTCGACCTAGCCGTGATGCAGCTGATGCAGGACGGCGTCCCGGAGAGCGACCG GTGCGTCGTCGGCGGCGTGCAGAACTCGCTGCAGTCCATGTTCGACCTGCTCACCTACGT CATGGGCATCATCGTCTCCGACCCCAGGGATTTCGGCGAGCTGATCGTGCTGTCCTTCTT TCTCGTGACCTGCGCGGCGGCAATGTACACGATGCATGTGTACCGGGTGAGGAAGCATCT GTTCCATCTCGACAGGATCCTGCCCAAGATGAACTGGATCAAAGCTTCTTGATATGGCAT CCCGTGATCGATAATGATGATTCATCAGTGATTTTCTCCAGCAAATTAGTACTGATCAAT GCTGGATACTGTACAATTATCTGCTTTGGTTTACTTCAATTTTAGACCTGTTCACTGGAA CTTTTGCTCAAAAGATTTGTGGCATCTGGAGAAATGCCACATGTTCCATCCAACTGGGGC TTGAAGAATCTCCATGTAATTAACCTTACAATAATATATAAGTACTCGCTTGATCCCATG ATTAAAAAAAAAAAAAAAAAAA



consensusID : consensus_8530#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1903
fasta sequence
                              [CTTCTTATTTTTTTTATAACTATTTAGGTGACATGCAAATAATAAAAGAGGACATCCCTCCAGAGTTTAAAATTCTCTCTCGATATTTACTACTATTTGAGAGACAGAGTAGGTTAGCTGCTGCCTCTGTCAGGTAGTAAACCGGAGGTAGCACAAGAGCAGCGTCTCCCTGACTGCTCAGATGCAGACGTGTTCTTGTCTCACCCTTCACCTGCATGATCCTCTCTTTTTCAATCCCTCGATCCACTCATCTCTCCTGGCTAAGAATCAATCTCTTCTTCACATCAATATCGGAGTGATCGATCAGTCTCGTCGCGGTTCGATCGATTGGCCTCTGATCCGTACATCTTCTTGTGTGATCGATCAAGAATCATTCAAGATTGCAAGGTGAGTAAGTATGGCGAGTGATGGCCACCTCGCGGCGCCGCTCCTCGACGGCGGCGGCGGGGTGGACGACGCGGCGCTTCTCCGGCGGCTCTACGTGGGGCACTTCCTGGCGAGGTGGGGCGCGAGGATGTGGGAGTTCTCGGTGGGGCTCTACATGATCCGAATCTGGCCGGGCTCGCTGTTGCTCACGGCGGTGTACGGCGTCGTGGAGGCCTCCGCCGTGGCGGCGCTGGGCCCCATCGTCGGCGCCGTCGTCGACAGGCTCGCATACCTGCAGGTGCTCAGGCTGTGGCTGCTGCTGCAGGGCGCGTCTTTCGTCGCCGCCGGCGTCTCCGTCACGGCGCTGCTCGTCTACGGCGCCCGGCTCGCCGCCGCGGGGTTCCCGGCGTTCGTGGCGCTCGTCGTCGTCACCAACGTCTCCGGCGCGCTCGCCGCGCTCTCCACCCTCGCTGGCACCATACTGATCGAGAGAGAATGGTAGTGTTCGGTGTTCGCATCTATCGATTGATAGATCGAGAAAATTGCTGAGAATTTGCTGCGTGCAGGGTGGTGGTGATCGCCGGCGGGCAACCGGCGGCGGTGCTGACGGGGATCAACTCGGTGATCCGGCGGATCGACCTGAGCTGCAAGCTGCTGGCGCCGGTGCTGTCCGGGTTCTTCATCAGCTTCGTGTCCATGGAGGCCTCCGCGGCGGCGCTGGCGGCGTGGAACCTCGCCGCCGTGTGGGTCCAGTACTGGCTCTTCGTCTCCGTCTACGCCGGCTTCCCGGCGCTCAGCGAGACCAGCCAGATCTCAAGACGGCGCGCCGACGATGACGAGGCAGCGGCGGCGGCGCAGCCGCAGAAG-GTGGAGCGGCTGTGGATGACGATGCTGCCGTGCTGGGAGTCGTGGGCGGTGTACGCGCGGCAGGAGGTGGTGCTCCCCGGCGTGGCGCTCGCGTTCCTCTACTTCACCGTGCTGAGCTTCGGGACGCTGATGACGGCGACGCTGGACTGGGAGGGGATCCCGGCATACGTGATCAGCCTCGCCCGCGGCGTCAGCGCCGCCGTCGGCATCGCCGCGACGTGGGTGTACCCGGCGGCGCACGCCCGCGTGTCCACGCTCCGCGCGGGCCTCTGGTCCATCTGGGCGCAGTGGTGCTGCCTCCTCGTCTGCGTCGCCTCCGTCTGGGCCGGCGGCGCCGCGCCATTGGCGTCGGCGTGGATGCTGATGGGCGGCGTGGCGGCGTCGCGGCTGGGGCTGTGGATGTTCGACCTAGCCGTGATGCAGCTGATGCAGGACGGCGTCCCGGAGAGCGACCGGTGCGTCGTCGGCGGCGTGCAGAACTCGCTGCAGTCCATGTTCGACCTGCTCACCTACGTCATGGGCATCACCGTCTCCGACCCCAGGGTACCAACACCATATCCCCCATGCTGCACATGGAAATTAATTGCCACAATAAAAATTTTTTACATAAAAACCCGACCTCTACATCCAACGAGGATATATACACGGCTTATTGCGATATTGGAAAGAA]

[-] EMBL AK106943             [CTTCTTATTTTTTTTATAACTATTTAGGTGACATGCAAATAATAAAAGAGGACATCCCTCCAGAGTTTAAAATTCTCTCTCGATATTTACTACTATTTGAGAGACAGAGTAGGTTAGCTGCTGCCTCTGTCAGGTAGTAAACCGGAGGTAGCACAAGAGCAGCGTCTCCCTGACTGCTCAGATGCAGACGTGTTCTTGTCTCACCCTTCACCTGCATGATCCTCTCTTTTTCAATCCCTCGATCCACTCATCTCTCCTGGCTAAGAATCAATCTCTTCTTCACATCAATATCGGAGTGATCGATCAGTCTCGTCGCGGTTCGATCGATTGGCCTCTGATCCGTACATCTTCTTGTGTGATCGATCAAGAATCATTCAAGATTGCAAGGTGAGTAAGTATGGCGAGTGATGGCCACCTCGCGGCGCCGCTCCTCGACGGCGGCGGCGGGGTGGACGACGCGGCGCTTCTCCGGCGGCTCTACGTGGGGCACTTCCTGGCGAGGTGGGGCGCGAGGATGTGGGAGTTCTCGGTGGGGCTCTACATGATCCGAATCTGGCCGGGCTCGCTGTTGCTCACGGCGGTGTACGGCGTCGTGGAGGCCTCCGCCGTGGCGGCGCTGGGCCCCATCGTCGGCGCCGTCGTCGACAGGCTCGCATACCTGCAGGTGCTCAGGCTGTGGCTGCTGCTGCAGGGCGCGTCTTTCGTCGCCGCCGGCGTCTCCGTCACGGCGCTGCTCGTCTACGGCGCCCGGCTCGCCGCCGCGGGGTTCCCGGCGTTCGTGGCGCTCGTCGTCGTCACCAACGTCTCCGGCGCGCTCGCCGCGCTCTCCACCCTCGCTGGCACCATACTGATCGAGAGAGAATGGTAGTGTTCGGTGTTCGCATCTATCGATTGATAGATCGAGAAAATTGCTGAGAATTTGCTGCGTGCAGGGTGGTGGTGATCGCCGGCGGGCAACCGGCGGCGGTGCTGACGGGGATCAACTCGGTGATCCGGCGGATCGACCTGAGCTGCAAGCTGCTGGCGCCGGTGCTGTCCGGGTTCTTCATCAGCTTCGTGTCCATGGAGGCCTCCGCGGCGGCGCTGGCGGCGTGGAACCTCGCCGCCGTGTGGGTCCAGTACTGGCTCTTCGTCTCCGTCTACGCCGGCTTCCCGGCGCTCAGCGAGACCAGCCAGATCTCAAGACGGCGCGCCGACGATGACGAGGCAGCGGCGGCGGCGCAGCCGCAGAAG GTGGAGCGGCTGTGGATGACGATGCTGCCGTGCTGGGAGTCGTGGGCGGTGTACGCGCGGCAGGAGGTGGTGCTCCCCGGCGTGGCGCTCGCGTTCCTCTACTTCACCGTGCTGAGCTTCGGGACGCTGATGACGGCGACGCTGGACTGGGAGGGGATCCCGGCATACGTGATCAGCCTCGCCCGCGGCGTCAGCGCCGCCGTCGGCATCGCCGCGACGTGGGTGTACCCGGCGGCGCACGCCCGCGTGTCCACGCTCCGCGCGGGCCTCTGGTCCATCTGGGCGCAGTGGTGCTGCCTCCTCGTCTGCGTCGCCTCCGTCTGGGCCGGCGGCGCCGCGCCATTGGCGTCGGCGTGGATGCTGATGGGCGGCGTGGCGGCGTCGCGGCTGGGGCTGTGGATGTTCGACCTAGCCGTGATGCAGCTGATGCAGGACGGCGTCCCGGAGAGCGACCGGTGCGTCGTCGGCGGCGTGCAGAACTCGCTGCAGTCCATGTTCGACCTGCTCACCTACGTCATGGGCATCACCGTCTCCGACCCCAGGGTACCAACACCATATCCCCCATGCTGCACATGGAAATTAATTGCCACAATAAAAATTTTTTACATAAAAACCCGACCTCTACATCCAACGAGGATATATACACGGCTTATTGCGATATTGGAAAGAA]
[+] EMBL OSR15681B            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCCAGATCTCAAGACGGCGCGCCGACGATGACGAGGCAGCGGCGNCGGCGCA CAG ATANGTGTGGAGCGGCTGTGGATGACGATGCTGCCGTGCTGGGAGTCGTGGGCGNTGTACGCGCGGCAGGAGGTGGTGCTCCCCGNCGTGGCGCTCGCGTTCCTCTACTTCACCGTNCTGAGCTTCGNGACGCTGATGACGNCGACGCTGGACTGNGAGGGGATCCCGGCATACGTGATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_8530#1 CTTCTTATTTTTTTTATAACTATTTAGGTGACATGCAAATAATAAAAGAGGACATCCCTC CAGAGTTTAAAATTCTCTCTCGATATTTACTACTATTTGAGAGACAGAGTAGGTTAGCTG CTGCCTCTGTCAGGTAGTAAACCGGAGGTAGCACAAGAGCAGCGTCTCCCTGACTGCTCA GATGCAGACGTGTTCTTGTCTCACCCTTCACCTGCATGATCCTCTCTTTTTCAATCCCTC GATCCACTCATCTCTCCTGGCTAAGAATCAATCTCTTCTTCACATCAATATCGGAGTGAT CGATCAGTCTCGTCGCGGTTCGATCGATTGGCCTCTGATCCGTACATCTTCTTGTGTGAT CGATCAAGAATCATTCAAGATTGCAAGGTGAGTAAGTATGGCGAGTGATGGCCACCTCGC GGCGCCGCTCCTCGACGGCGGCGGCGGGGTGGACGACGCGGCGCTTCTCCGGCGGCTCTA CGTGGGGCACTTCCTGGCGAGGTGGGGCGCGAGGATGTGGGAGTTCTCGGTGGGGCTCTA CATGATCCGAATCTGGCCGGGCTCGCTGTTGCTCACGGCGGTGTACGGCGTCGTGGAGGC CTCCGCCGTGGCGGCGCTGGGCCCCATCGTCGGCGCCGTCGTCGACAGGCTCGCATACCT GCAGGTGCTCAGGCTGTGGCTGCTGCTGCAGGGCGCGTCTTTCGTCGCCGCCGGCGTCTC CGTCACGGCGCTGCTCGTCTACGGCGCCCGGCTCGCCGCCGCGGGGTTCCCGGCGTTCGT GGCGCTCGTCGTCGTCACCAACGTCTCCGGCGCGCTCGCCGCGCTCTCCACCCTCGCTGG CACCATACTGATCGAGAGAGAATGGTAGTGTTCGGTGTTCGCATCTATCGATTGATAGAT CGAGAAAATTGCTGAGAATTTGCTGCGTGCAGGGTGGTGGTGATCGCCGGCGGGCAACCG GCGGCGGTGCTGACGGGGATCAACTCGGTGATCCGGCGGATCGACCTGAGCTGCAAGCTG CTGGCGCCGGTGCTGTCCGGGTTCTTCATCAGCTTCGTGTCCATGGAGGCCTCCGCGGCG GCGCTGGCGGCGTGGAACCTCGCCGCCGTGTGGGTCCAGTACTGGCTCTTCGTCTCCGTC TACGCCGGCTTCCCGGCGCTCAGCGAGACCAGCCAGATCTCAAGACGGCGCGCCGACGAT GACGAGGCAGCGGCGGCGGCGCAGCCGCAGAAGGTGGAGCGGCTGTGGATGACGATGCTG CCGTGCTGGGAGTCGTGGGCGGTGTACGCGCGGCAGGAGGTGGTGCTCCCCGGCGTGGCG CTCGCGTTCCTCTACTTCACCGTGCTGAGCTTCGGGACGCTGATGACGGCGACGCTGGAC TGGGAGGGGATCCCGGCATACGTGATCAGCCTCGCCCGCGGCGTCAGCGCCGCCGTCGGC ATCGCCGCGACGTGGGTGTACCCGGCGGCGCACGCCCGCGTGTCCACGCTCCGCGCGGGC CTCTGGTCCATCTGGGCGCAGTGGTGCTGCCTCCTCGTCTGCGTCGCCTCCGTCTGGGCC GGCGGCGCCGCGCCATTGGCGTCGGCGTGGATGCTGATGGGCGGCGTGGCGGCGTCGCGG CTGGGGCTGTGGATGTTCGACCTAGCCGTGATGCAGCTGATGCAGGACGGCGTCCCGGAG AGCGACCGGTGCGTCGTCGGCGGCGTGCAGAACTCGCTGCAGTCCATGTTCGACCTGCTC ACCTACGTCATGGGCATCACCGTCTCCGACCCCAGGGTACCAACACCATATCCCCCATGC TGCACATGGAAATTAATTGCCACAATAAAAATTTTTTACATAAAAACCCGACCTCTACAT CCAACGAGGATATATACACGGCTTATTGCGATATTGGAAAGAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8530#0      ------------------------------------------------------------
consensus_8530#1      CTTCTTATTTTTTTTATAACTATTTAGGTGACATGCAAATAATAAAAGAGGACATCCCTC 60
                                                                                  

consensus_8530#0      ------------------------------------------------------------
consensus_8530#1      CAGAGTTTAAAATTCTCTCTCGATATTTACTACTATTTGAGAGACAGAGTAGGTTAGCTG 120
                                                                                  

consensus_8530#0      ------------------------------------------------------------
consensus_8530#1      CTGCCTCTGTCAGGTAGTAAACCGGAGGTAGCACAAGAGCAGCGTCTCCCTGACTGCTCA 180
                                                                                  

consensus_8530#0      GATGCAGACGTGTTCTTGTCTCACCCTTCACCTGCATGATCCTCTCTTTTTCAATCCCTC 60
consensus_8530#1      GATGCAGACGTGTTCTTGTCTCACCCTTCACCTGCATGATCCTCTCTTTTTCAATCCCTC 240
                      ************************************************************

consensus_8530#0      GATCCACTCATCTCTCCTGGCTAAGAATCAATCTCTTCTTCACATCAATATCGGAGTGAT 120
consensus_8530#1      GATCCACTCATCTCTCCTGGCTAAGAATCAATCTCTTCTTCACATCAATATCGGAGTGAT 300
                      ************************************************************

consensus_8530#0      CGATCAGTCTCGTCGCGGTTCGATCGATTGGCCTCTGATCCGTACATCTTCTTGTGTGAT 180
consensus_8530#1      CGATCAGTCTCGTCGCGGTTCGATCGATTGGCCTCTGATCCGTACATCTTCTTGTGTGAT 360
                      ************************************************************

consensus_8530#0      CGATCAAGAATCATTCAAGATTGCAAGGTGAGTAAGTATGGCGAGTGATGGCCACCTCGC 240
consensus_8530#1      CGATCAAGAATCATTCAAGATTGCAAGGTGAGTAAGTATGGCGAGTGATGGCCACCTCGC 420
                      ************************************************************

consensus_8530#0      GGCGCCGCTCCTCGACGGCGGCGGCGGGGTGGACGACGCGGCGCTTCTCCGGCGGCTCTA 300
consensus_8530#1      GGCGCCGCTCCTCGACGGCGGCGGCGGGGTGGACGACGCGGCGCTTCTCCGGCGGCTCTA 480
                      ************************************************************

consensus_8530#0      CGTGGGGCACTTCCTGGCGAGGTGGGGCGCGAGGATGTGGGAGTTCTCGGTGGGGCTCTA 360
consensus_8530#1      CGTGGGGCACTTCCTGGCGAGGTGGGGCGCGAGGATGTGGGAGTTCTCGGTGGGGCTCTA 540
                      ************************************************************

consensus_8530#0      CATGATCCGAATCTGGCCGGGCTCGCTGTTGCTCACGGCGGTGTACGGCGTCGTGGAGGC 420
consensus_8530#1      CATGATCCGAATCTGGCCGGGCTCGCTGTTGCTCACGGCGGTGTACGGCGTCGTGGAGGC 600
                      ************************************************************

consensus_8530#0      CTCCGCCGTGGCGGCGCTGGGCCCCATCGTCGGCGCCGTCGTCGACAGGCTCGCATACCT 480
consensus_8530#1      CTCCGCCGTGGCGGCGCTGGGCCCCATCGTCGGCGCCGTCGTCGACAGGCTCGCATACCT 660
                      ************************************************************

consensus_8530#0      GCAGGTGCTCAGGCTGTGGCTGCTGCTGCAGGGCGCGTCTTTCGTCGCCGCCGGCGTCTC 540
consensus_8530#1      GCAGGTGCTCAGGCTGTGGCTGCTGCTGCAGGGCGCGTCTTTCGTCGCCGCCGGCGTCTC 720
                      ************************************************************

consensus_8530#0      CGTCACGGCGCTGCTCGTCTACGGCGCCCGGCTCGCCGCCGCGGGGTTCCCGGCGTTCGT 600
consensus_8530#1      CGTCACGGCGCTGCTCGTCTACGGCGCCCGGCTCGCCGCCGCGGGGTTCCCGGCGTTCGT 780
                      ************************************************************

consensus_8530#0      GGCGCTCGTCGTCGTCACCAACGTCTCCGGCGCGCTCGCCGCGCTCTCCACCCTCGCTGG 660
consensus_8530#1      GGCGCTCGTCGTCGTCACCAACGTCTCCGGCGCGCTCGCCGCGCTCTCCACCCTCGCTGG 840
                      ************************************************************

consensus_8530#0      CACCATACTGATCGAGAGAGAATGG----------------------------------- 685
consensus_8530#1      CACCATACTGATCGAGAGAGAATGGTAGTGTTCGGTGTTCGCATCTATCGATTGATAGAT 900
                      *************************                                   

consensus_8530#0      ---------------------------------GTGGTGGTGATCGCCGGCGGGCAACCG 712
consensus_8530#1      CGAGAAAATTGCTGAGAATTTGCTGCGTGCAGGGTGGTGGTGATCGCCGGCGGGCAACCG 960
                                                       ***************************

consensus_8530#0      GCGGCGGTGCTGACGGGGATCAACTCGGTGATCCGGCGGATCGACCTGAGCTGCAAGCTG 772
consensus_8530#1      GCGGCGGTGCTGACGGGGATCAACTCGGTGATCCGGCGGATCGACCTGAGCTGCAAGCTG 1020
                      ************************************************************

consensus_8530#0      CTGGCGCCGGTGCTGTCCGGGTTCTTCATCAGCTTCGTGTCCATGGAGGCCTCCGCGGCG 832
consensus_8530#1      CTGGCGCCGGTGCTGTCCGGGTTCTTCATCAGCTTCGTGTCCATGGAGGCCTCCGCGGCG 1080
                      ************************************************************

consensus_8530#0      GCGCTGGCGGCGTGGAACCTCGCCGCCGTGTGGGTCCAGTACTGGCTCTTCGTCTCCGTC 892
consensus_8530#1      GCGCTGGCGGCGTGGAACCTCGCCGCCGTGTGGGTCCAGTACTGGCTCTTCGTCTCCGTC 1140
                      ************************************************************

consensus_8530#0      TACGCCGGCTTCCCGGCGCTCAGCGAGACCAGCCAGATCTCAAGACGGCGCGCCGACGAT 952
consensus_8530#1      TACGCCGGCTTCCCGGCGCTCAGCGAGACCAGCCAGATCTCAAGACGGCGCGCCGACGAT 1200
                      ************************************************************

consensus_8530#0      GACGAGGCAGCGGCGGCGGCGCAGCCGCAGAAGGTGGAGCGGCTGTGGATGACGATGCTG 1012
consensus_8530#1      GACGAGGCAGCGGCGGCGGCGCAGCCGCAGAAGGTGGAGCGGCTGTGGATGACGATGCTG 1260
                      ************************************************************

consensus_8530#0      CCGTGCTGGGAGTCGTGGGCGGTGTACGCGCGGCAGGAGGTGGTGCTCCCCGGCGTGGCG 1072
consensus_8530#1      CCGTGCTGGGAGTCGTGGGCGGTGTACGCGCGGCAGGAGGTGGTGCTCCCCGGCGTGGCG 1320
                      ************************************************************

consensus_8530#0      CTCGCGTTCCTCTACTTCACCGTGCTGAGCTTCGGGACGCTGATGACGGCGACGCTGGAC 1132
consensus_8530#1      CTCGCGTTCCTCTACTTCACCGTGCTGAGCTTCGGGACGCTGATGACGGCGACGCTGGAC 1380
                      ************************************************************

consensus_8530#0      TGGGAGGGGATCCCGGCATACGTGATCAGCCTCGCCCGCGGCGTCAGCGCCGCCGTCGGC 1192
consensus_8530#1      TGGGAGGGGATCCCGGCATACGTGATCAGCCTCGCCCGCGGCGTCAGCGCCGCCGTCGGC 1440
                      ************************************************************

consensus_8530#0      ATCGCCGCGACGTGGGTGTACCCGGCGGCGCACGCCCGCGTGTCCACGCTCCGCGCGGGC 1252
consensus_8530#1      ATCGCCGCGACGTGGGTGTACCCGGCGGCGCACGCCCGCGTGTCCACGCTCCGCGCGGGC 1500
                      ************************************************************

consensus_8530#0      CTCTGGTCCATCTGGGCGCAGTGGTGCTGCCTCCTCGTCTGCGTCGCCTCCGTCTGGGCC 1312
consensus_8530#1      CTCTGGTCCATCTGGGCGCAGTGGTGCTGCCTCCTCGTCTGCGTCGCCTCCGTCTGGGCC 1560
                      ************************************************************

consensus_8530#0      GGCGGCGCCGCGCCATTGGCGTCGGCGTGGATGCTGATGGGCGGCGTGGCGGCGTCGCGG 1372
consensus_8530#1      GGCGGCGCCGCGCCATTGGCGTCGGCGTGGATGCTGATGGGCGGCGTGGCGGCGTCGCGG 1620
                      ************************************************************

consensus_8530#0      CTGGGGCTGTGGATGTTCGACCTAGCCGTGATGCAGCTGATGCAGGACGGCGTCCCGGAG 1432
consensus_8530#1      CTGGGGCTGTGGATGTTCGACCTAGCCGTGATGCAGCTGATGCAGGACGGCGTCCCGGAG 1680
                      ************************************************************

consensus_8530#0      AGCGACCGGTGCGTCGTCGGCGGCGTGCAGAACTCGCTGCAGTCCATGTTCGACCTGCTC 1492
consensus_8530#1      AGCGACCGGTGCGTCGTCGGCGGCGTGCAGAACTCGCTGCAGTCCATGTTCGACCTGCTC 1740
                      ************************************************************

consensus_8530#0      ACCTACGTCATGGGCATCATCGTCTCCGACCCCAGGGATTTCGGCGAGCTGATCGTGCTG 1552
consensus_8530#1      ACCTACGTCATGGGCATCACCGTCTCCGACCCCAGGG-TACCAAC------ACCATATCC 1793
                      ******************* ***************** *  *  *      * * *    

consensus_8530#0      TCCTTCTTTCTCGTGACCTGCGCGGCGGCAATGTACACGATGCATGTGTACCGGGTGAGG 1612
consensus_8530#1      CCCATGCTGCACATG--------GAAATTAATTGCCACAATAAAAATTTTTTACATAAAA 1845
                       ** *  * * * **        *     ***   *** **  *  * *      * *  

consensus_8530#0      AAGCATCTGTTCCATCTCGACAGGATCCTGCCCAAGATGAACTGGATCAAAGCTTCTTGA 1672
consensus_8530#1      ACCCGACCTCTACATC-CAACGAGGATATATACACGGCTTATTGCGATA-------TTGG 1897
                      *  *  *   * **** * **  *    *   ** *    * **    *       *** 

consensus_8530#0      TATGGCATCCCGTGATCGATAATGATGATTCATCAGTGATTTTCTCCAGCAAATTAGTAC 1732
consensus_8530#1      AAAGAA------------------------------------------------------ 1903
                       * *                                                        

consensus_8530#0      TGATCAATGCTGGATACTGTACAATTATCTGCTTTGGTTTACTTCAATTTTAGACCTGTT 1792
consensus_8530#1      ------------------------------------------------------------
                                                                                  

consensus_8530#0      CACTGGAACTTTTGCTCAAAAGATTTGTGGCATCTGGAGAAATGCCACATGTTCCATCCA 1852
consensus_8530#1      ------------------------------------------------------------
                                                                                  

consensus_8530#0      ACTGGGGCTTGAAGAATCTCCATGTAATTAACCTTACAATAATATATAAGTACTCGCTTG 1912
consensus_8530#1      ------------------------------------------------------------
                                                                                  

consensus_8530#0      ATCCCATGATTAAAAAAAAAAAAAAAAAAA 1942
consensus_8530#1      ------------------------------
                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)