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Oryza sativa
cluster # 854 cluster # 854       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_854#0 length = 1477 sequences # 2  

consensusID : consensus_854#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1477
fasta sequence
                              [AGAAACCGCTCTTGCTGTGGCTCAACGGAGGTCCCGGATGCTCATCCGTCGCCTATGGCGCCGCCCAGGAGCTGGGCCCGTTTCTGGTCAGGAGCTACGGCGAAAATCTCACTCTCAATGCCTACTCATGGAACAAAGCTGTGAATCTGCTGTTCCTTGAAGCGCCCGTCGGCGTGGGGTTCTCCTACACGAACCGGACATCTGATCTCCGACGCCTCGGCGATCGTGTGACGGCGCAGGACTCGTACAGCTTCCTCCTAAACTGGCTGAACAAGTTCCCAGAGTTCAAGAATCGGGACTTCTATATTGCCGGAGAGAGCTATGCTGGGCACTATGTCCCACAGCTCGCAGAGCTAATCTACGACGGGAACAAAGGAGCCAGCAGAGACAGAGTCATCAACATCAAAGGTTTCATGATCGGCAACGCGGTGCTGAACGACGCGACGGACCAGATGGGCATGGTGGAGTACGCGTGGAGCCACGCCATCATCTCCGACGAGCTCTACTCCGCGGTGCGCCGGGAGTGCGACTCGTTCAAGGAGGAGGAGGACGGCGGCAAGCCAAGCAAGGGCTGCTCCCCGGCCGTCCGCGCCTTCCTCAGGGCCTACGACGACATCGACATCTACAGCATCTACACCCCGACGTGCCTCTCCTCCTCCTCCTCCTCCCCCGCGTCCGCATCGCCGCGCCGCTCGTCTCCCGGGCTCGTCGCCGCGCCCCGCCTCTTCTCCAAGCACGTAAAAGAGGCGTGGCGCAGGATGCAGCGCGTGCCGGCGGGGTACGACCCGTGCACGGAGGAGTACGTGAAGGGGTATTTCAACCGCGAGGACGTGCAGCGCGCGCTGCACGCGAACAGGACGGGCCTGAGCTACCCGTACTCCCCCTGCAGTGAGGCCATAAGTAAATGGAACGACTCGCCGTCGACCGTGCTCCCCATCCTGAAGAAGCTCATGGGCGCCGGGCTGCGCATCTGGGTTTACAGCGGTGACACGGACGGGAGGGTGCCGGTGACGTCGACGCGGTACAGCCTGAACACGATGAAGCTGCGGCCGCGGCTGATGCGGAAGACCGCCGGCGATGGCGCCGGCGAAGAGTCGGAGTGGGGCGGGTGGCGCGCGTGGTACGACAGGCAGCAGGTGGGCGGGTGGGCGGTGGAGTACGAGGAAGGCCTGACGCTGGTGACGGTGCGCGGCGCCGGGCACCAGGTGCCGCTCTTCGCGCCCCGGCGGTCGCTCGCCATGCTCTACCACTTCCTCCGCGGCAGCTCGCTGCCCGCTTCGCGCTCCCGCTGATGAGCACTGCTGCCCAAGTGCAGCCATAGCTTTGCTAACTTTGCTCGATTGGATAGGGAAGGCAATGGTTTTAAGTGTGTAGCATTCCGTGAACAATTGGGAATTGTTGTTCTCGGCTGGTACAAGCACCCTCTGTAACCCGCATGCTACTACGGTTATCATACGCAGCAGTTGGAACCTTTACG]

[+] EMBL AK105830             [AGAAACCGCTCTTGCTGTGGCTCAACGGAGGTCCCGGATGCTCATCCGTCGCCTATGGCGCCGCCCAGGAGCTGGGCCCGTTTCTGGTCAGGAGCTACGGCGAAAATCTCACTCTCAATGCCTACTCATGGAACAAAGCTGTGAATCTGCTGTTCCTTGAAGCGCCCGTCGGCGTGGGGTTCTCCTACACGAACCGGACATCTGATCTCCGACGCCTCGGCGATCGTGTGACGGCGCAGGACTCGTACAGCTTCCTCCTAAACTGGCTGAACAAGTTCCCAGAGTTCAAGAATCGGGACTTCTATATTGCCGGAGAGAGCTATGCTGGGCACTATGTCCCACAGCTCGCAGAGCTAATCTACGACGGGAACAAAGGAGCCAGCAGAGACAGAGTCATCAACATCAAAGGTTTCATGATCGGCAACGCGGTGCTGAACGACGCGACGGACCAGATGGGCATGGTGGAGTACGCGTGGAGCCACGCCATCATCTCCGACGAGCTCTACTCCGCGGTGCGCCGGGAGTGCGACTCGTTCAAGGAGGAGGAGGACGGCGGCAAGCCAAGCAAGGGCTGCTCCCCGGCCGTCCGCGCCTTCCTCAGGGCCTACGACGACATCGACATCTACAGCATCTACACCCCGACGTGCCTCTCCTCCTCCTCCTCCTCCCCCGCGTCCGCATCGCCGCGCCGCTCGTCTCCCGGGCTCGTCGCCGCGCCCCGCCTCTTCTCCAAGCACGTAAAAGAGGCGTGGCGCAGGATGCAGCGCGTGCCGGCGGGGTACGACCCGTGCACGGAGGAGTACGTGAAGGGGTATTTCAACCGCGAGGACGTGCAGCGCGCGCTGCACGCGAACAGGACGGGCCTGAGCTACCCGTACTCCCCCTGCAGTGAGGCCATAAGTAAATGGAACGACTCGCCGTCGACCGTGCTCCCCATCCTGAAGAAGCTCATGGGCGCCGGGCTGCGCATCTGGGTTTACAGCGGTGACACGGACGGGAGGGTGCCGGTGACGTCGACGCGGTACAGCCTGAACACGATGAAGCTGCGGCCGCGGCTGATGCGGAAGACCGCCGGCGATGGCGCCGGCGAAGAGTCGGAGTGGGGCGGGTGGCGCGCGTGGTACGACAGGCAGCAGGTGGGCGGGTGGGCGGTGGAGTACGAGGAAGGCCTGACGCTGGTGACGGTGCGCGGCGCCGGGCACCAGGTGCCGCTCTTCGCGCCCCGGCGGTCGCTCGCCATGCTCTACCACTTCCTCCGCGGCAGCTCGCTGCCCGCTTCGCGCTCCCGCTGATGAGCACTGCTGCCCAAGTGCAGCCATAGCTTTGCTAACTTTGCTCGATTGGATAGGGAAGGCAATGGTTTTAAGTGTGTAGCATTCCGTGAACAATTGGGAATTGTTGTTCTCGGCTGGTACAAGCACCCTCTGTAACCCGCATGCTACTACGGTTATCATACGCAGCAGTTGGAACCTTTACG]
[+] EMBL CA758868             [                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGCGACGGACCAGATGGGCATGGTGGAGTACGCGTGGAGCCACGCCATCATCTCCGACGAGCTCTACTCCGCGGTGCGCCGGGAGTGCGACTCGTTCAAGGAGGAGGAGGACGGCGGCAAGCCAAGCAAGGGCTGCTCCCCGGCCGTCCGCGCCTTCCTCAGGGCCTACGACGACATCGACATCTACAGCATCTACACCCCGACGTGCCTCTCCTCCTCCTCCTCCTCCCCCGCGTCCGCATCGCCGCGCCGCTCGTCTCCCGGGCTCGTCGCCGCGCCCCGCCTCTTCTCCAAGCAC      GAGGCGTGGCGCAGGATGCAGCGCGTGCCGGCGGGGTACGACCCGTGCACGGAGGAGTACGTGAAGGGGTATTTCAACCGCGAGGACGTGCAGCGCGCGCTGCACGCGAACAGGACGGGCCTGAGCTACCCGTACTCCCCCTGCAGTGAGGCCATAAGTAAATGGAACGACTCGCCGTCGACCGTGCTCCCCATCCTGAAGAAGCTCATGGGCGCCGGGCTGCGCATCTGGGTTTACAGCGGTGACACGGACGGGAGGGTGCCGGTGACGTC AAGCGGTACAGCCTGAACACGATGAAct                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_854#0 AGAAACCGCTCTTGCTGTGGCTCAACGGAGGTCCCGGATGCTCATCCGTCGCCTATGGCG CCGCCCAGGAGCTGGGCCCGTTTCTGGTCAGGAGCTACGGCGAAAATCTCACTCTCAATG CCTACTCATGGAACAAAGCTGTGAATCTGCTGTTCCTTGAAGCGCCCGTCGGCGTGGGGT TCTCCTACACGAACCGGACATCTGATCTCCGACGCCTCGGCGATCGTGTGACGGCGCAGG ACTCGTACAGCTTCCTCCTAAACTGGCTGAACAAGTTCCCAGAGTTCAAGAATCGGGACT TCTATATTGCCGGAGAGAGCTATGCTGGGCACTATGTCCCACAGCTCGCAGAGCTAATCT ACGACGGGAACAAAGGAGCCAGCAGAGACAGAGTCATCAACATCAAAGGTTTCATGATCG GCAACGCGGTGCTGAACGACGCGACGGACCAGATGGGCATGGTGGAGTACGCGTGGAGCC ACGCCATCATCTCCGACGAGCTCTACTCCGCGGTGCGCCGGGAGTGCGACTCGTTCAAGG AGGAGGAGGACGGCGGCAAGCCAAGCAAGGGCTGCTCCCCGGCCGTCCGCGCCTTCCTCA GGGCCTACGACGACATCGACATCTACAGCATCTACACCCCGACGTGCCTCTCCTCCTCCT CCTCCTCCCCCGCGTCCGCATCGCCGCGCCGCTCGTCTCCCGGGCTCGTCGCCGCGCCCC GCCTCTTCTCCAAGCACGTAAAAGAGGCGTGGCGCAGGATGCAGCGCGTGCCGGCGGGGT ACGACCCGTGCACGGAGGAGTACGTGAAGGGGTATTTCAACCGCGAGGACGTGCAGCGCG CGCTGCACGCGAACAGGACGGGCCTGAGCTACCCGTACTCCCCCTGCAGTGAGGCCATAA GTAAATGGAACGACTCGCCGTCGACCGTGCTCCCCATCCTGAAGAAGCTCATGGGCGCCG GGCTGCGCATCTGGGTTTACAGCGGTGACACGGACGGGAGGGTGCCGGTGACGTCGACGC GGTACAGCCTGAACACGATGAAGCTGCGGCCGCGGCTGATGCGGAAGACCGCCGGCGATG GCGCCGGCGAAGAGTCGGAGTGGGGCGGGTGGCGCGCGTGGTACGACAGGCAGCAGGTGG GCGGGTGGGCGGTGGAGTACGAGGAAGGCCTGACGCTGGTGACGGTGCGCGGCGCCGGGC ACCAGGTGCCGCTCTTCGCGCCCCGGCGGTCGCTCGCCATGCTCTACCACTTCCTCCGCG GCAGCTCGCTGCCCGCTTCGCGCTCCCGCTGATGAGCACTGCTGCCCAAGTGCAGCCATA GCTTTGCTAACTTTGCTCGATTGGATAGGGAAGGCAATGGTTTTAAGTGTGTAGCATTCC GTGAACAATTGGGAATTGTTGTTCTCGGCTGGTACAAGCACCCTCTGTAACCCGCATGCT ACTACGGTTATCATACGCAGCAGTTGGAACCTTTACG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)