These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8543#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 807 fasta sequence [ATCCCATCTCAGAGCAGCGTACAAGGACACGGAATCAGCGAAAAGGCACGAGCTCACGATCGAGCTAGATCAAGCTAAGCTAGCAGTAAGATCGGAAGGAGAAATCTAGTCGTTGTTGGTCATAGACAAGG-AAAAAAAAAACAAGCCAGAAACCGATGGGGAACTGCGGGGCGTCGCAGCGTGCCGTGGAGTCGTGGGCCGACGGCGACGAGTGGGAGGACGAGGCGGCGGCGTCGTCATCGTCGGAGGACGATGGCCACCGCGAGCGGATGGAGCACGTGGCAGAGGTGACCATCAGGATCACCAAGAGGCAGCTGCACGAGCTGATGGAGCGCAAGGGCGCCGGGAATGGCCACGGGAAGATCAGCCGGCGGTCCACGCAGCAGCTGCT-GGC-GGACATCATGAACTCCGGCGAGGTGCACCACCAC-GACCAGCACAGGGAGGCGCACT-GGAAGCCCGCCCTGCAGAGCATTCC-GGAGGCCGTGGAGTCATGAGTTCCATTCTACGCCTTAAGCTTGGTGGTTAAGTCGCCGCTTGATTATTTTTCCAAGAAGTTTGTCGCTTTCCTCCATGTTTCTTTTCCATGACCACATTTTCTTTACTCTGCACCAGATTTAATTTCGGTGCTTATTGATGTGCATAGCTAGAATACATTTGGGTTAATTCATCAATTGTTCAGACAGGACATGTACAAAAATCCGCGCGCTCAAAAAGAAGTCGAAGAATATGTAAATAAATGTAGGGGAAATCATTGTAAAGATATTTTACAATTGTATAAAGAAGGCTAATTTGAGGAAAAAAAAAAAA] [+] EMBL AK111091 [ATCCCATCTCAGAGCAGCGTACAAGGACACGGAATCAGCGAAAAGGCACGAGCTCACGATCGAGCTAGATCAAGCTAAGCTAGCAGTAAGATCGGAAGGAGAAATCTAGTCGTTGTTGGTCATAGACAAGGAAAAAAAAAAACAAGCCAGAAACCGATGGGGAACTGCGGGGCGTCGCAGCGTGCCGTGGAGTCGTGGGCCGACGGCGACGAGTGGGAGGACGAGGCGGCGGCGTCGTCATCGTCGGAGGACGATGGCCACCGCGAGCGGATGGAGCACGTGGCAGAGGTGACCATCAGGATCACCAAGAGGCAGCTGCACGAGCTGATGGAGCGCAAGGGCGCCGGGAATGGCCACGGGAAGATCAGCCGGCGGTCCACGCAGCAGCTGCT GGC GGACATCATGAACTCCGGCGAGGTGCACCACCAC GACCAGCACAGGGAGGCGCACT GGAAGCCCGCCCTGCAGAGCATTCC GGAGGCCGTGGAGTCATGAGTTCCATTCTACGCCTTAAGCTTGGTGGTTAAGTCGCCGCTTGATTATTTTTCCAAGAAGTTTGTCGCTTTCCTCCATGTTTCTTTTCCATGACCACATTTTCTTTACTCTG ] [+] EMBL AU101579 [ TCAGCGAAAAGGCACGAGCTCACGATCGAGCTAGATCAAGCTAAGCTAGCAGTAAGATCGGAAGGAGAAATCTAGTCGTTGTTGGTCATAGACAAGG AAAAAAAAAACAAGCCAGAAACCGATGGGGAACTGCGGGGCGTCGCAGCGTGCCGTGGAGTCGTGGGCCGACGGCGACGAGTGGGAGGACGAGGCGGCGGCGTCGTCATCGTCGGAGGACGATGGCCACCGCGAGCGGATGGAGCACGTGGCAGAGGTGACCATCAGGATCACCAAGAGGCAGCTGCACGAGCTGATGGAGCGCAAGGGCGCCGGGAATGGCCACGGGAAGATCAGCCGGCGGTCCACGCAGCAGCTGCTGGGC GGACATCATGAACTCCGGCGAGGTGCACCACCAC GACCAGCACAGGGAGGCGCACTGGGAAGCCCGCCCTGCAGAGCATTCCGGGAGGCCGTGGAGTCATGAGTTCCATTCTANGCCTTAAGCTTGGTGGTTAAGTCGCCGCTTGATTATTTTTCCAAGAAGTTTGTCGCTTTCCTCCATGTTTCTTTTCCATGACCAC ] [+] EMBL AU164968 [ TCAGCGAAAAGGCACGAGCTCACGATCGAGCTAGATCAAGCTAAGCTAGCAGTAAGATCGGAAGGAGAAATCTAGTCGTTGTTGGTCATAGACAAGG AAAAAAAAAACAAGCCAGAAACCGATGGGGAACTGCGGGGCGTCGCAGCGTGCCGTGGAGTCGTGGGCCGACGGCGACGAGTGGGAGGACGAGGCGGCGGCGTCGTCATCGTCGGAGGACGATGGCCACCGCGAGCGGATGGAGCACGTGGCAGAGGTGACCATCAGGATCACCAAGAGGCAGCTGCACGAGCTGATGGAGCGCAAGGGCGCCGGGAATGGCCACGGGAAGATCAGCCGGCGGTCCACGCAGCAGCTGCT GGCGGGACATCATGAACTCCGGCGAGGTGCACCACCACGGACCAGCACAGGGAGGCGCACT ] [+] EMBL AU101580 [ GAAGATCAGCCGGCGGTCCACGCAGCAGCTGCT GGC GGACATCATGAACTCCGGCGAGGTGCACCACCAC GACCAGCACAGGGAGGCGCANT GGAAGCCCNCCCTGCAGAGCATTCC GGAGNCCGTGGAGTCATGAGTNCCATTCTACGCCTTAAGCTTGGTGGTTAAGTCNCCGCTTGATTATTTTTCCAAGAAGTTTGTCGCTTTCCTCCATGTTTCTTTTCCATGACCACATTTTCTTTACTCTGCACCAGATTTAATTTCGGTGCTTATTGATGTGCATAGCTAGAATACATTTGGGTTAATTCATCAATTGTTCAGACAGGACATGTACAAAAATCCGCGCGCTCAAAAAGAAGTCGAAGAATATGTAAATAAATGTAGGGGAAATCATTGTAAAGATATTTTACAATTGTATAAAGAAGGCTAATTTGAGGAAAAAAAAAAAA] [+] EMBL AU031585 [ gcCATCATGAACTCCGGCGAGGTGCACCACCAC GACCAGCACAGGGAGGCGCACT GGAANCCCGCCCTGCAGAGCATTCC GGAGNCCGTGGAGTCATGAGTTCCATTCTACNCCTTAAGCTTGGTGGTTAAGTCNCCGCTTGATTATTTTTCCAAGAAGTTTGTCGCTTTCCTCCATGTTTCTTTTCCATGACCACATTTTCTTTACTCTGCACCAGATTTAATTTCGGTGCTTATTGATGTGCATAGCTAGAATACATTTGGGTTAATTCATCAATTGTTCAGACAGGACATGTACAAAAATCCGCGCGCTCAAAAAGAAGTCGAAGAATATGTAAATAAATGTAGGGGAAATCATTGTAAAGATATTTTACAATTGTATAAAGAAGGCTAATTTGAGGAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||