These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8558#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2623 fasta sequence [GCTAGGTGCGGTGCAGACGGTGTCGGGGGGTGCAGGGCAGGCGCAAAAGGAATTACGGAATTGCCCCAACCAAGGAGGAGACGGAGGGGAGGGCAAGAAGAAGAAGGACGGTGCAGAGGAAAGGAAAGGATTGGAATTCCAGGGGCGACGACATGGCCGCCGTGCAGGGGCAGGGGCAGGGGAAGCTCCTGTACATTGTGGTGGTCGACGACGATGGCGCCACCTTCCGCTACACGCGCTCCCTCCTCCACAGCACTCTGCAGCTGATGGGATGCAAGCCGCGCCATGCCTTCGAGATCAGCGGCAGGGTGTTCGACGAGATCCGAGGTCACATGGGCGGTGACATGGCCATGGGCGGCGGCGGTGGCGTGCAGCGCTACGAGCTGGCCGCCGACGCGGAAGCCGCCAGCCCCAGGCAGTTCCAGTTCGAGCTCTACAAGCGCCGCACCACCCTTCTCATCCCTCGCCCGCTCTTCCTCCGCCTCGTCTGCCACGCCCTCGCCCTCTACAAGTATGTCGCCCCCGACCAGCGCTCTGATCTCCACCGAGCCTGCAGGATCCGGGAAAGGAAGGAATCAGTCACCATTCTTCTCTGCGGAACCAGCGGCTGCGGCAAGTCTACTCTTTCCACCTTGCTGGGGAGCAGATTAGGAATCACTACTGTAGTCTCCACCGATTCCATTCGCCACATGATGCGGAGCTTTGTTGAAGAGAAACCAAATCCCCTTCTCTGGGCATCTACCTATCATGCAGGCGAATGGCCTCGACCCAGTAGCGGTCGCTGATGCTAAAGCTAGGCGCAAAGCAAAAAAACGCTCAGGCATCTCAACGACCTCAACCATTGATTTTGATAAAACCAGGCCTCTCAATGACAAACCTGACGGCAAACCAATTGGGAAGAAGCAGATGGCCATAGAAGGCTACAAAG-CACAAAGTGAGATGGTCATTGATAGTTTGGATCGGTTGATTACTGCCTGGGAGGATCGCAAGGAATCAGTTGTTGTTGAGGGTGTTCACCTAAGCCTTAATTTTGTGATGGGGCTAATGA-GGAAACATCCTTCTATAATACCTTTTATGATCTACATATCCGATGAGGGCAAGCACACCGAGAGGTTTGCCGTACGTGCAAAGTACATGACACTTGACCCAACAAAAAATAAGTACGTCAAATACATCAGCAACATTAGAACTATCCAAGAGTACCTCTGCAGCCGAGCCGACAAGTACCTAGTTCCCAAGGTGAACAACACTAATGTTGATCGGAGTGTGGCTTCTATCCATGCCACTGTCTTTAGCTGCCTCCGTAGGAGAGCTGCTGGTGATCAGTTATATGACCCTGCTACAAACACAGTGGCAGTTGTAAACGAGGAATACAAAAACCAATGTGTGGCCAACTCCATGAGTTCCAAGGGGATGTTCAAATTGATTCAAAGGTTAGGATCCTCAAGAAAGCTCATGGCCATTGTCAATGTGGATGGATCTGTTTCAAAGGCTTGGCCGGTTGAGTCCAGCAGCGGGGATGGAAAAGGCGGTTCGGAAAATGGCAGTAAGAAATATGTAGGCGATCCAATATACGGGCCTCTAAATATTGGAAGGGCAGAGTCAGTCAATCTCCAGTTTGGCGCTTTCGGAATAAGTGCCTGGCCTACTGATGCAGGCTGTACAAGTCAAGCTGGAAGTGTCAACGAGTCATGGGACAATGCTAATGAAGGCACTGGAAGCCATGTTCCTTCTTCTTCTGGTTCTCCTAAGAAGTTGGATGGACATTGTAAAGAGATTAAAGAATCAGCAGCGGCATCTGGAAGTGATGATGACGAAGAAGAAGAAGAAGAAGCGGCTGATGTTCCACCTAATTCAGGGAGTGAGGAGGACCTAAGTGAAGAAGACATAAGGGCGATCCATGAGGAGATGGAAGGTTCCGTCGATGAAGATTGCAATAGGTCTGATGAGGAATATGATGACCTGGCCATGCGTGATTGCATGGAGAATGGTTTTTTGACCGACGATGGTGTTGTTCACACCGTATTTGATGGCAACGGACAGAAGCACAGCACATTGAGAAAGCGTCAAGTTAATTTGCGTACCCTATCAAAGATCGACTTAGACTCTCCTGACACTGCACGCTCTTCTTCTGCTCTTCCTATTAGCGCAAGCAGCAAGCGAAATGGCACAAGGAGGTGGAAGCGGTCCTTGAGTGAATCATTTCGTTCACGGCCACGGAGTGCTCCATCTTTAGTGGAATTGACGCCAAAGCACAAGGGCTCAGCCGTTCCAGAGGTGGCTCCCGACAAGTAGAACTGCATATAACCAGGGTATATCTGCCTAAC--TAGTGTTTTGCAGGAGGCCTAGACTTAACAGATGAATAACCGA-TTTTTTTTTCTTTCTTTCTGGTCTTTAACCCTCATGCC-TTTTTTTTCCTGGACTTGGAGAGGATGCAGATAAAAATTCACACAGCGTGATTCTTTTGGGAGTTATGTTTTCTGTTTGCATATGCCTAAGCTGTAAATGATGAAAATACAGTATATGTACTGTCTGAACCCTCCGAGATGTAGAGAAGTTTGAGGCAATGTGTTGTTCTTATCAATGCTGCACATCACCAATTTACCTTGACAGGCAAAAAAAA] [+] EMBL AK072621 [GCTAGGTGCGGTGCAGACGGTGTCGGGGGGTGCAGGGCAGGCGCAAAAGGAATTACGGAATTGCCCCAACCAAGGAGGAGACGGAGGGGAGGGCAAGAAGAAGAAGGACGGTGCAGAGGAAAGGAAAGGATTGGAATTCCAGGGGCGACGACATGGCCGCCGTGCAGGGGCAGGGGCAGGGGAAGCTCCTGTACATTGTGGTGGTCGACGACGATGGCGCCACCTTCCGCTACACGCGCTCCCTCCTCCACAGCACTCTGCAGCTGATGGGATGCAAGCCGCGCCATGCCTTCGAGATCAGCGGCAGGGTGTTCGACGAGATCCGAGGTCACATGGGCGGTGACATGGCCATGGGCGGCGGCGGTGGCGTGCAGCGCTACGAGCTGGCCGCCGACGCGGAAGCCGCCAGCCCCAGGCAGTTCCAGTTCGAGCTCTACAAGCGCCGCACCACCCTTCTCATCCCTCGCCCGCTCTTCCTCCGCCTCGTCTGCCACGCCCTCGCCCTCTACAAGTATGTCGCCCCCGACCAGCGCTCTGATCTCCACCGAGCCTGCAGGATCCGGGAAAGGAAGGAATCAGTCACCATTCTTCTCTGCGGAACCAGCGGCTGCGGCAAGTCTACTCTTTCCACCTTGCTGGGGAGCAGATTAGGAATCACTACTGTAGTCTCCACCGATTCCATTCGCCACATGATGCGGAGCTTTGTTGAAGAGAAACCAAATCCCCTTCTCTGGGCATTTACCTATCATGCAGGCGAATGGCCTCGACCCAGTAGCGGTCGCTGATGGTAAAGGTAGGCGCAAGGCAAAAAAACGCTCAGGCATCTCAACGACCTCAACCATTGATTTTGATAAAACCAGGCCTCTCAATGACCAACCTGACGGCAAACCAATTGGGAAGAAGCAGATGGCCATAGAAGGCTACAAAGCCACAAAGTGAGATGGTCATTGATAGTTTGGATCGGTTGATTACTGCCTGGGAGGATCGCAAGGAATCAGTTGTTGTTGAGGGTGTTCACCTAAGCCTTAATTTTGTGATGGGGCTAATGA GGAAACATCCTTCTATAATACCTTTTATGATCTACATATCCGATGAGGGCAAGCACACCGAGAGGTTTGCCGTACGTGCAAAGTACATGACACTTGACCCAACAAAAAATAAGTACGTCAAATACATCAGCAACATTAGAACTATCCAAGAGTACCTCTGCAGCCGAGCCGACAAGTACCTAGTTCCCAAGGTGAACAACACTAATGTTGATCGGAGTGTGGCTTCTATCCATGCCACTGTCTTTAGCTGCCTCCGTAGGAGAGCTGCTGGTGATCAGTTATATGACCCTGCTACAAACACAGTGGCAGTTGTAAACGAGGAATACAAAAACCAATGTGTGGCCAACTCCATGAGTTCCAAGGGGATGTTCAAATTGATTCAAAGGTTAGGATCCTCAAGAAAGCTCATGGCCATTGTCAATGTGGATGGATCTGTTTCAAAGGCTTGGCCGGTTGAGTCCAGCAGCGGGGATGGAAAAGGCGGTTCGGAAAATGGCAGTAAGAAATATGTAGGCGATCCAATATACGGGCCTCTAAATATTGGAAGGGCAGAGTCAGTCAATCTCCAGTTTGGCGCTTTCGGAATAAGTGCCTGGCCTACTGATGCAGGCTGTACAAGTCAAGCTGGAAGTGTCAACGAGTCATGGGACAATGCTAATGAAGGCACTGGAAGCCATGTTCCTTCTTCTTCTGGTTCTCCTAAGAAGTTGGATGGACATTGTAAAGAGATTAAAGAATCAGCAGCGGCATCTGGAAGTGATGATGACGAAGAAGAAGAAGAAGAAGCGGCTGATGTTCCACCTAATTCAGGGAGTGAGGAGGACCTAAGTGAAGAAGACATAAGGGCGATCCATGAGGAGATGGAAGGTTCCGTCGATGAAGATTGCAATAGGTCTGATGAGGAATATGATGACCTGGCCATGCGTGATTGCATGGAGAATGGTTTTTTGACCGACGATGGTGTTGTTCACACCGTATTTGATGGCAACGGACAGAAGCACAGCACATTGAGAAAGCGTCAAGTTAATTTGCGTACCCTATCAAAGATCGACTTAGACTCTCCTGACACTGCACGCTCTTCTTCTGCTCTTCCTATTAGCGCAAGCAGCAAGCGAAATGGCACAAGGAGGTGGAAGCGGTCCTTGAGTGAATCATTTCGTTCACGGCCACGGAGTGCTCCATCTTTAGTGGAATTGACGCCAAAGCACAAGGGCTCAGCCGTTCCAGAGGTGGCTCCCGACAAGTAGAACTGCATATAACCAGGGTATATCTGCCTAAC TAGTGTTTTGCAGGAGGCCTAGACTTAACAGATGAATAACCGA TTTTTTTTTCTTTCTTTCTGGTCTTTAACCCTCATGCC TTTTTTTTCCTGGACTTGGAGAGGATGCAGATAAAAATTCACACAGCGTGATTCTTTTGGGAGTTATGTTTTCTGTTTGCATATGCCTAAGCTGTAAATGATGAAAATACAGTATATGTACTGTCTGAACCCTCCGAGATGTAGAGAAGTTTGAGGCAATGTGTTGTTCTTA ] [+] EMBL AK109639 [ GGGGCGACGACATGGCCGCCGTGCAGGGGCAGGGGCAGGGGAAGCTCCTGTACATTGTGGTGGTCGACGACGATGGCGCCACCTTCCGCTACACGCGCTCCCTCCTCCACAGCACTCTGCAGCTGATGGGATGCAAGCCGCGCCATGCCTTCGAGATCAGCGGCAGGGTGTTCGACGAGATCCGAGGTCACATGGGCGGTGACATGGCCATGGGCGGCGGCGGTGGCGTGCAGCGCTACGAGCTGGCCGCCGACGCGGAAGCCGCCAGCCCCAGGCAGTTCCAGTTCGAGCTCTACAAGCGCCGCACCACCCTTCTCATCCCTCGCCCGCTCTTCCTCCGCCTCGTCTGCCACGCCCTCGCCCTCTACAAGTATGTCGCCCCCGACCAGCGCTCTGATCTCCACCGAGCCTGCAGGATCCGGGAAAGGAAGGAATCAGTCACCATTCTTCTCTGCGGAACCAGCGGCTGCGGCAAGTCTACTCTTTCCACCTTGCTGGGGAGCAGATTAGGAATCACTACTGTAGTCTCCACCGATTCCATTCGCCACATGATGCGGAGCTTTGTTGAAGAGAAACAAAATCCCCTTCTCTGGGCATCTACCTATCATGCAGGCGAAT GCCTCGACCCAGTAGCGGTCGCTGATGCTAAAGCTAGGCGCAAAGCCAAAAAACGCTCAGGCATCTCAACGACCTCAACCATTGATTTTGATAAAACCAGGCCTCTCAATGACAAACCTGACGGCAAACCAATTGGGAAGAAGCAGATGGCCATAGAAGGCTACAAAG CACAAAGTGAGATGGTCATTGATAGTTTGGATCGGTTGATTACTGCCTGGGAGGATCGCAAGGAATCAGTTGTTGTTGAGGGTGTTCACCTAAGCCTTAATTTTGTGATGGGGCTAATGA GGAAACATCCTTCTATAATACCTTTTATGATCTACATATCCGATGAGGGCAAGCACACCGAGAGGTTTGCCGTACGTGCAAAGTACATGACACTTGACCCAACAAAAAATAAGTACGTCAAATACATCAGCAACATTAGAACTATCCAAGAGTACCTCTGCAGCCGAGCCGACAAGTACCTAGTTCCCAAGGTGAACAACACTAATGTTGATCGGAGTGTGGCTTCTATCCATGCCACTGTCTTTAGCTGCCTCCGTAGGAGAGCTGCTGGTGATCAGTTATATGACCCTGCTACAAACACAGTGGCAGTTGTAAACGAGGAATACAAAAACCAATGTGTGGCCAACTCCATGAGTTCCAAGGGGATGTTCAAATTGATTCAAAGGTTAGGATCCTCAAGAAAGCTCATGGCCATTGTCAATGTGGATGGATCTGTTTCAAAGGCTTGGCCGGTTGAGTCCAGCAGCGGGGATGGAAAAGGCGGTTCGGAAAATGGCAGTAAGAAATATGTAGGCGATCCAATATACGGGCCTCTAAATATTGGAAGGGCAGAGTCAGTCAATCTCCAGTTTGGCGCTTTCGGAATAAGTGCCTGGCCTACTGATGCAGGCTGTACAAGTCAAGCTGGAAGTGTCAACGAGTCATGGGACAATGCTAATGAAGGCACTGGAAGCCATGTTCCTTCTTCTTCTGGTTCTCCTAAGAAGTTGGATGGACATTGTAAAGAGATTAAAGAATCAGCAGCGGCATCTGGAAGT ] [+] EMBL C28183 [ CCTTCTCTGGGCATCTACCTATCATGCAGGCGAATG CTCGACCCAGTAGCGGTCGCTGATGCTAAAGCTAGGCGCAAAGC AAAAAACGCTCAGGCATCTCAACGACCTCAACCATTGATTTTGATAAAACCAGGCCTCTCAATGACAAACCTGACGGCAAACCAATTGGGAAGAAGCAGATGGCCATAGAAGGCTACAAAG CACAAAGTGAGATGGTCATTGATAGTTTGGATCGGTTGATTACTGCCTGGGAGGATCGCAAGGAATCAGTTGTTGTTGAGGGTGTTCACCTAAGCCTTAATTTTGTGATGGGGCTAATGAGGGAAACATCCTTCTATAATACCTTTTATGATCTACATATCCGATGAGGGCAAGCACACCGNGAGGTTTNCCGTACGTGCAAAGTACATGACACTTGNCCC ACAAAAAt ] [+] EMBL CA765693 [ CGTGATTGCATGGAGAATGGTTTTTTGACCGACGATGGTGTTGTTCACACCGTATTTGATGGCAACGGACAGAAGCACAGCACATTGAGAAAGCGTCAAGTTAATTTGCGTACCCTATCAAAGATCGACTTAGACTCTCCTGACACTGCACGCTCTTCTTCTGCTCTTCCTATTAGCGCAAGCAGCAAGCGAAATGGCACAAGGAGGTGGAAGCGGTCCTTGAGTGAATCATTTCGTTCACGGCCACGGAGTGCTCCATCTTTAGTGGAATTGACGCCAAAGCACAAGGGCTCAGCCGTTCCAGAGGTGGCTCCCGACAAGTAGAACTGCATATAACCAGGGTATATCTGCCTAACTATAGTGTTTTGCATGAGGCCTAGACTTGACAGATGAATAACCGATTTTTTTTTTCTTTCTTTCTGGTCTTTAACCCTCATGCC TTTTTTTTCCTGGACTTGGAGAGGATGCAGATAAAAATTCACACAGCGTGATTCTTTTGGGAGTTATGTTTTCTGTTTGCATATGCCTAAGCTGTAAATGATGAAAATACAGTATATGTACTGTCTGAACCCTCCGAGATGTAGAGAAGTTTGAGGCAATGTGTTGCTCTTATCAATGCTGCACATCACCAATTTACC ] [+] EMBL AU166957 [ GTCCTTGAGTGAATCATTTCGTTCNCGGCCACGGAGTGCTCCATCTTTAGTGGAATTGACGCCAAAGCACAAGGGCTCAGCCGTTCCAGAGGTGGCTCCCGACAAGTAGAACTGCATATAACCAGGGTATATCTGCCTAAC TAGTGTTTTGCAGGAGGCCTAGACTTAACAGATGAATAACCGA TTTTTTTTTCTTTCTTTCTGGTCTTTAACCCTCATGCCTTTTTTTTTCCTGGACTTGGAGAGGATGCAGATAAAAATTCACACAGCGTGATTCTTTTGGGAGTTATGTTTTCTGTTTGCATATGCCTAAGCTGTAAATGATGAAAATACAGTATATGTACTGTCTGAACCCTCCGAGATGTAGAGAAGTTTGAGGCAATGTGTTGTTCTTATCAATGCTGCACATCACCAATTTACCTTGACAGGCAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||