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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8583#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1427 fasta sequence
[CACCGGATCAAACTTTAGTTGAGAGCAAAGGAAAGGCCTCTGGTTTTCCTGAAATGTGGAGGGCAGGATGCATGGAGCAATGGATGCCGACGGTGTCAATGGTCGCCACCAATGTTGTGATAGCCATCATGACAGCCTTGATCAAGCAAGCACTCAACCAGGGGATGAACCGCCTGGTCCTCATTACTTTCCGGCAAATGGTGGCTACTGTATTCCTTGGCCCCATAGCCTACTTCAAGGAAAGGAAGACAAGACCAAAGTTCACAACTGAAATCTTTGTCTACATGTTCTTAAGCGGAATGCTTGGGCCGGTGCTTCTTCAGTATACACTGTTTGTAGGGCTGGAGTTTACAACAGCAACATTTGCTGCAACTTTCGGCAATTTGCTTCCGGT-GGTTACTTTCTTGATTTCACTCGTTTTCA-GGTTTGAAGCACTTAATGTAAAGAGCAGATCAGGGAGTGCCAAGATCTCAGGAACATTGGTTTCTCTCAGTGGAGCAATGATGCTCACCTTCTACAAGGGCTCAGCACTGACCCATACACCATCATCTAGCAGTAGTCCAGCATCCAGCAGTAGCCACAGCCAAGCTGAAGAACATGACACGGCCCATTGGGTGCTCGGTTCCGTCTCGTTGCTCGCGAACGTAGTTGGGTTCGCATTGTGGCTGATGCTGCAGAGGAAATTCACCAGGAAGTACCCAGCAATCTACTCTGCTACTGCATTCATGTCATTGTTCAGCTGCTTGCAAGCAGGAGCACTTGCCTTGTCCATACAAAGGAGCAGCATCTCAATCTGGGCTCTCAAGGGGAAAATAGAGATAGCCACAGTTGTATATTGTGGTGTAGTGGCGTCTGGCTTTGGGTACCTGATGCTCACATATTGTGTGGAGAAGAGAGGCCCTGTTTTCACCGCTGCCTTCAGCCCTCTCTCCCAGATCTTCGTGGCCGGCATCGATCTCTTCATCCT-CCACGA-GCCGCTCTA-TCTT-GGCAGTGTGTTA-GGGTCAG-TCCTGG-TGATT-GTGGGGCTCTACCTTGTTCTGTGGGGCAAAAGGGAGGAGACCGCCGCCGTCAGCAAAGATG-CCATTGCTTCGCCGGAGAAGCCAGTGCAAGACGTAGAACAGCAG-CAAGAGAAAGTGTGATTGATATTGATTCCTCTTAGCTAGGCTGCATGCTATCTGCAAATGTGTTGCAATTAACTTAACTTGAGTGTTTATGCATTCGTGATGATGGAGTATATATGTACTAATCAGAAATCTGACAAGGCAACGTACAATTAATCCAAGCTGTAATAGCTATTGGTGTACTAGTAGAGTATTAGTAGACTCACAGGACTGTACACATGAAGGAACATATGTGCTGAAATACTGTACCATTATGCTTGAGCTAGATGTGCAAAAGAAGTGGTTTTTTCATCTCTCAAAAAAAAAAAA]
[+] EMBL AK059047 [CACCGGATCAAACTTTAGTTGAGAGCAAAGGAAAGGCCTCTGGTTTTCCTGAAATGTGGAGGGCAGGATGCATGGAGCAATGGATGCCGACGGTGTCAATGGTCGCCACCAATGTTGTGATAGCCATCATGACAGCCTTGATCAAGCAAGCACTCAACCAGGGGATGAACCGCCTGGTCCTCATTACTTTCCGGCAAATGGTGGCTACTGTATTCCTTGGCCCCATAGCCTACTTCAAGGAAAGGAAGACAAGACCAAAGTTCACAACTGAAATCTTTGTCTACATGTTCTTAAGCGGAATGCTTGGGCCGGTGCTTCTTCAGTATACACTGTTTGTAGGGCTGGAGTTTACAACAGCAACATTTGCTGCAACTTTCGGCAATTTGCTTCCGGT GGTTACTTTCTTGATTTCACTCGTTTTCA GGTTTGAAGCACTTAATGTAAAGAGCAGATCAGGGAGTGCCAAGATCTCAGGAACATTGGTTTCTCTCAGTGGAGCAATGATGCTCACCTTCTACAAGGGCTCAGCACTGACCCATACACCATCATCTAGCAGTAGTCCAGCATCCAGCAGTAGCCACAGCCAAGCTGAAGAACATGACACGGCCCATTGGGTGCTCGGTTCCGTCTCGTTGCTCGCGAACGTAGTTGGGTTCGCATTGTGGCTGATGCTGCAGAGGAAATTCACCAGGAAGTACCCAGCAATCTACTCTGCTACTGCATTCATGTCATTGTTCAGCTGCTTGCAAGCAGGAGCACTTGCCTTGTCCATACAAAGGAGCAGCATCTCAATCTGGGCTCTCAAGGGGAAAATAGAGATAGCCACAGTTGTATATTGTGGTGTAGTGGCGTCTGGCTTTGGGTACCTGATGCTCACATATTGTGTGGAGAAGAGAGGCCCTGTTTTCACCGCTGCCTTCAGCCCTCTCTCCCAGATCTTCGTGGCCGGCATCGATCTCTTCATCCT CCACGA GCCGCTCTA TCTT GGCAGTGTGTTA GGGTCAG TCCTGG TGATT GTGGGGCTCTACCTTGTTCTGTGGGGCAAAAGGGAGGAGACCGCCGCCGTCAGCAAAGATG CCATTGCTTCGCCGGAGAAGCCAGTGCAAGACGTAGAACAGCAG CAAGAGAAAGTGTGATTGATATTGATTCCTCTTAGCTAGGCTGCATGCTATCTGCAAATGTGTTGCAATTAACTTAACTTGAGTGTTTATGCATTCGTGATGATGGAGTATATATGTACTAATCAGAAATCTGACAAGGCAACGTACAATTAATCCAAGCTGTAATAGCTATTGGTGTACTAGTAGAGTATTAGTAGACTCACAGGACTGTACACATGAAGGAACATATGTGCTGAAATACTGTACCATTATGCTTGAGCTAGATGTGCAAAAGAAG ]
[+] EMBL CB672018 [ TTAGTTGAGAGCAAAGGAAAGGCCTCTGGTTTTCCTGAAATGTGGAGGGCAGGATGCATGGAGCAATGGATGCCGACGGTGTCAATGGTCGCCACCAATGTTGTGATAGCCATCATGACAGCCTTGATCAAGCAAGCACTCAACCAGGGGATGAACCGCCTGGTCCTCATTACTTTCCGGCAAATGGTGGCTACTGTATTCCTTGGCCCCATAGCCTACTTCAAGGAAAGGAAGACAAGACCAAAGTTCACAACTGAAATCTTTGTCTACATGTTCTTAAGCGGAATGCTTGGGCCGGTGCTTCTTCAGTATACACTGTTTGTAGGGCTGGAGTTTACAACAGCAACATTTGCTGCAACTTTCGGCAATTTGCTTCCGGT GGTTACTTTCTTGATTTCACTCGTTTTCA GGTTTGAAGCACTTAATGTAAAGAGCAGATCAGGGAGTGCCAAGATCTCAGGAACATTGGTTTCTCTCAGTGGAGCAATGATGCTCACCTTCTACAAGGGCTCAGCACTGACCCATACACCATCATCTAGCAGTAGTCCAGCATCCAGCAGTAGCCACAGCCAAGCTGAAGAACATGACACGGCCCATTGGGTGCTCGGTTCCGTCTCGTTGCTCGCGAACGTAGTTGGGTTCGCATTGTGGCTGATGCTGCAGAGGAAATTCACCAGGAAGTACCCAGCAATCTACTCTGCTACTGCATTCATGTCATTGTTCAGCTGCTTGCAAGCANGAGCACTTGCCTTGTCCATACAAAGGAGCAGCATCTCAATCTGGGCTCTC AGGNGAAA ]
[+] EMBL AU055729 [ AGAGCAAAGGAAAGGCCTCTGGTTTTCCTGAAATGTGGAGGGCAGGATGCATGGAGCAATGGATGCCGACGGTGTCAATGGTCGCCACCAATGTTGTGATAGCCATCATGACAGCCTTGATCAAGCAAGCACTCAACCAGGGGATGAACCGCCTGGTCCTCATTACTTTCCGGCAAATGGTGGCTACTGTATTCCTTGGCCCCATAGCCTACTTCAAGGAAAGGAAGACAAGACCAAAGTTCACAACTGAAATCTTTGTCTACATGTTCTTAAGCGGAATGCTTGGGCCGGTGCTTCTTCAGTATACACTGTTTGTAGGGCTGGAGTTTACAACAGCAACATTTGCTGCAACTTTCGGCAATTTGCTTCCGGTGGGTTACTTTCTTGATTTCACTCCGTTTCANGGTTTGAAGCACTTAATGTAAAGAGCAGATCAGGGAG ]
[+] EMBL CA766620 [ cgagaCAAGGGGAAAA NGAGAT GCCACAGTTGTATATTGTGGTGTAGTGGCGTCTGGCTTTGGGTACCTGATGCTCACATATTGTGTGGAGAAGAGAGGCCCTGTTTT ACCGCTGCCTTCAGCCCTCTCTCCCAGATCTTCGTGGCCGGCATCGATCTCTTCATCCT CCACGA GCCGCTCTA TCTT GGCAGTGTGTTA GGGTCAG TCCTGG TGATT GTGGGGCTCTACCTTGTTCTGTGGGGCAAAAGGGAGGAGACCACCGCCGTCAGCAAAGATG CCATTGCTTCGCCGGAGAAGCCAGTGCAAGACGTAGAACAGCAG CAAGAGAAAGTGTGATTGATATTGATTCCTCTTAGCTAGGCTGCATGCTATCTGCAAATGTGTTGCAATTAACTTAACTTGAGTGTTTATGCATTCGTGATGATGGAGTATATATGTACTAATCAGAAATCTGAGAAGGCAACGTACAATTAATCCAAGCTGTAATAGCTATTGGTTTACTAGNAGAGTATTAGTAGACTCACAGGACTGTACACATGAAGGAACATATGTGCTGAAATACTGTACCATTATGCATGAGC ]
[+] EMBL AU055730 [ atcCCTNCCACGAGGCCGCTCTATTCTTGGGCAGTGTNTTAGGGGTCAGTTCCTGGNTGATTGGTGGGGCTCTCCCTTGTTCTGTGGGGCAAAAGGGAGGAGACCGCCGCCGTCAGCAAAGATGCCCATTGNTTCGCCGGAGAAGCCAGTGCAAGACGTAGAACAGCAGCCAAGAGAAAGTGTGATTGATATTGATTCCTCTTAGCTAGGCTGCATGCTATCTGCAAATGTGTTGCAATTAACTTAACTTGAGTGTTTATGCATTCGTGATGATGGAGTATATATGTACTAATCAGAAATCTGACAAGGCAACGTACAATTAATCCAAGCTGTAATAGCTATTGGTGTACTAGTAGAGTATTAGTAGACTCACAGGACTGTACACATGAAGGAACATATGTGCTGAAATACTGTACCATTATGCTTGAGCTAGATGTGCAAAAGAAGTGGTTTTTTCATCTCTCAAAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||