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Oryza sativa
cluster # 86 cluster # 86       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_86#0 length = 3051 sequences # 1  
consensus_86#1 length = 1309 sequences # 1  

consensusID : consensus_86#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3051
fasta sequence
                              [AGGATTTTCAGAGGCCAACCCAACCAAACAAACAACCTCCAAAAACCATCCCCCGGGATTATCTCCGCGATCTCCTCTTCTCCCCCGCCGCCGCTGCTTTGCGGTTGCACCCGCCCATGTCCGCGCCGCCGCCGCCGCCGCCTAATGCTAGCACTCCTGCTCCTGCACCGCCGTTGCCTCCGTCTCTTGGTGCACCCGACCCGCCGCCACCACCACCACCTGTGATGCCATCTCGTCCGCCGCCGGCTGCTCCGCCTCCCTCGCCACCGGCAGCGTCTCCTCCTCCTCCTCCTGCTCCACCGGTGGCGCCGCGGCCAACTCCGTCGCCTCCTCCTCCTCCACCGGTGATGCCGTCGAAGCCAGTGAAACCTGTACCGCCTTCGTCGCCTCCTCCTCCTCCGGTGATGCAGCCGCCGTCGCCATCTCCACCACTAATACCGCCGCCGCCGCCGCCTACTCCGGTGATGCCGGTGCTACCACCGACGCCGTCCCCGCCTTCACCGGTGAATCCACCACCGCCATCGCCGTCCCCGCCGCCTTCTCCGGTGAACCCACTGCCGCCAATAACGTCACCACCTTCCCCGGTGTCACCACCTTCTCCGGCAAATCCACTGCCGCCTGCGACGTCACCACCTTCTCCGGCGAACCCACTGCCGCCTGCGACGTCACCACCTTCTCCGGCGAATCCACTGCCGCCGACGACGTCACCTCCTTCTCCAGCGCCGCCTCCAACGGTGCCTTCCCAACCACCGGAGGCTGCACCGGCGCCGACGACGAAGCCACCACCAACCCCGCTCCCACCAGCTCGATCGCCGCCAGCGCCATCTCCAGCTTCCCGCGAACCGTCTCCCTCGCCGTCGCCGTCAGTAGCACCACCGTCTCTTCCAATCTTCACCCCGTCACCCCCCGGTGGTGGCCGCGGCGCCGCCACTCCTTCGCCGCCGTCGTCGCGGCCGTCGCCTAGATCTCCGCCGCCGCCGTCCTCCGCCCCGCAAGGAGTGATGATCGCCATCGTCGCGGCCATCGTGGCGTTGCTCGTGCTCGGCGCAGTCGCCGCCGGGCTGCTGTGCTTCTGCTCGCGCCGCCGTCGCCGCCGCCGCCGCCGCCAACCAACATCGCCGGGTGATTTCCTCGGACCCTTACCGGTGACATCGCGTCATCACCAGCAATCACAATTCATCAAGCCAACAGTAACATACCCACCACAGCTGAATGCACACTCGCCGCTGCAAAGCAGCAGCAACTCCGACCCACCGTCACCGCTGCTGCAACCGTCTCCACCTCCACCGGCGGCGAGCGGCGGCACGGTGTCGTACGGTGACCTGGTGGCGGCGACGAACGGCTTCTCCGAGGGCAACCTGCTCGGGGAGGGCGGGTTCGGGCACGTGTACCGCGGCGAGCTGCTCCTGCACGACGGCCGGAGGCAGCCGGTGGCCATCAAGAAGCTCCGGCCGGGGAGCCGGCAGGGCGAGCGCGAGTTCCGCGCCGAGGTGGACATCATCAGCCGCATCCACCACCGCAACCTCGTCTCCCTCGTGGGCTACTGCATCCACGCCGACCACCGCCTCCTCGTCTACGAGTTCGTCCCCAACAAGACGCTGGACTTCCGCCTCCACGGGAGCAGCCGGCCGACGCTGGATTGGCCACAGAGGTGGATGATCGCCGTCGGGTCGGCCAAGGGGTTGGCCTACCTGCACGAAGACTGTCGTCCAAAGATTATTCACCGAGACATCAAGGCAGCCAACATCCTTCTCGATTACAAATTCGAGCCAAAGGTTGCGGACTTTGGGCTAGCCAAGATCCAACCGGGAGACGACACACACGTTTCCACCCGCGTGATGGGCACCTTCGGCTACTTGGCGCCGGAGTATGCTGCTACTGGCAAAGTAAACGACAGATCAGACGTCTTCTCCTTCGGTGTCGTTCTTCTGGAGCTGATCACCGGGAAGAGGCCTGTCATTTCGACTGAGCCCTTCAACGACGAGACTCTGGTTTCTTGGGCAAGGCCTCAGCTGACAAAAGCTCTAGAGCAGCATGTCTACGACGATCTGATCGATCCAAAGCTTGACGCCTTGTACGACGCCCACGACATGCATCGGCTGATCTCCTGCGCTGCCGCCGCGGTGCGGCACACGGCACGCTCCCGCCCTCGCATGACCCAGATTGTGAGATACTTGGAGGGGGAGCTGTCAATAGATGACCTGAACGCCGGCGTCGCACCGGGGCAGAGCTCGCTGCGCTCGCAGGAGCACTCCGGCGACATGACGGAGCTGGTGCGGCGGCGGCTCAGGAGGGTCGCGTTCCCGCCGGGCAGCGGCGTCACCGTCACCGGCACCGGCGCCGTCACCGACAGCGGCTACCTGAGCGAGGCGACGAGCGAGTACGGGGTGAACCCATCCATCAGCTCGAGCAGCGGCGGCGACGACGACGACACGGCCGGCGAGGTGGTCGGCGGCGTCACCGCCACCAGCCGGCCGCACGCCGCCGCCGCCGCGTCCAGCCCGGACACGTCCGAGGTGGCGTCACCGCACGCCGGCGAGCTCGCCGCCGACGCCGCCAAGCCGATGAGCAGACGAACACGCCTCGGCCGCTTTCCGTGAGCGCACTGGATCTCTCTTTTTCACCGGTGGTAAGTGGTATAATTGTACATGCGTAAAAGTGGCTAATAGTGGATGAATTTTTCAGCTCATTTTTTCTTCGGTTTTAGCAAGGTTTTGTCTGAATTTATTGTCGCGATTAATTTCGCACTAAGGGCCTGTTCATTTTATCAAATTTTGGCAATACTAAATTTTAACAACTTTACCAAAATTTGATAAGGTTGAAAATGACATCAAAGTGAACAGGCCCTAAACGAAAAGAGAGCAAAGTTGGATTAGCAGTCAACGTGAACCACATGGGACGGATCAGTGATGAGTGAGCTGTACAGAACTTTCATGTTTCTTCCATTTGTTAGGTTGTCAATACACCTGTCCTTGAGAAGATGCCATGTGGATAATTATCATCCACGCCTCTGCTATCAGTCACTATCATTGGTCATGCAACACAAGCGTA]

[+] EMBL AK110196             [AGGATTTTCAGAGGCCAACCCAACCAAACAAACAACCTCCAAAAACCATCCCCCGGGATTATCTCCGCGATCTCCTCTTCTCCCCCGCCGCCGCTGCTTTGCGGTTGCACCCGCCCATGTCCGCGCCGCCGCCGCCGCCGCCTAATGCTAGCACTCCTGCTCCTGCACCGCCGTTGCCTCCGTCTCTTGGTGCACCCGACCCGCCGCCACCACCACCACCTGTGATGCCATCTCGTCCGCCGCCGGCTGCTCCGCCTCCCTCGCCACCGGCAGCGTCTCCTCCTCCTCCTCCTGCTCCACCGGTGGCGCCGCGGCCAACTCCGTCGCCTCCTCCTCCTCCACCGGTGATGCCGTCGAAGCCAGTGAAACCTGTACCGCCTTCGTCGCCTCCTCCTCCTCCGGTGATGCAGCCGCCGTCGCCATCTCCACCACTAATACCGCCGCCGCCGCCGCCTACTCCGGTGATGCCGGTGCTACCACCGACGCCGTCCCCGCCTTCACCGGTGAATCCACCACCGCCATCGCCGTCCCCGCCGCCTTCTCCGGTGAACCCACTGCCGCCAATAACGTCACCACCTTCCCCGGTGTCACCACCTTCTCCGGCAAATCCACTGCCGCCTGCGACGTCACCACCTTCTCCGGCGAACCCACTGCCGCCTGCGACGTCACCACCTTCTCCGGCGAATCCACTGCCGCCGACGACGTCACCTCCTTCTCCAGCGCCGCCTCCAACGGTGCCTTCCCAACCACCGGAGGCTGCACCGGCGCCGACGACGAAGCCACCACCAACCCCGCTCCCACCAGCTCGATCGCCGCCAGCGCCATCTCCAGCTTCCCGCGAACCGTCTCCCTCGCCGTCGCCGTCAGTAGCACCACCGTCTCTTCCAATCTTCACCCCGTCACCCCCCGGTGGTGGCCGCGGCGCCGCCACTCCTTCGCCGCCGTCGTCGCGGCCGTCGCCTAGATCTCCGCCGCCGCCGTCCTCCGCCCCGCAAGGAGTGATGATCGCCATCGTCGCGGCCATCGTGGCGTTGCTCGTGCTCGGCGCAGTCGCCGCCGGGCTGCTGTGCTTCTGCTCGCGCCGCCGTCGCCGCCGCCGCCGCCGCCAACCAACATCGCCGGGTGATTTCCTCGGACCCTTACCGGTGACATCGCGTCATCACCAGCAATCACAATTCATCAAGCCAACAGTAACATACCCACCACAGCTGAATGCACACTCGCCGCTGCAAAGCAGCAGCAACTCCGACCCACCGTCACCGCTGCTGCAACCGTCTCCACCTCCACCGGCGGCGAGCGGCGGCACGGTGTCGTACGGTGACCTGGTGGCGGCGACGAACGGCTTCTCCGAGGGCAACCTGCTCGGGGAGGGCGGGTTCGGGCACGTGTACCGCGGCGAGCTGCTCCTGCACGACGGCCGGAGGCAGCCGGTGGCCATCAAGAAGCTCCGGCCGGGGAGCCGGCAGGGCGAGCGCGAGTTCCGCGCCGAGGTGGACATCATCAGCCGCATCCACCACCGCAACCTCGTCTCCCTCGTGGGCTACTGCATCCACGCCGACCACCGCCTCCTCGTCTACGAGTTCGTCCCCAACAAGACGCTGGACTTCCGCCTCCACGGGAGCAGCCGGCCGACGCTGGATTGGCCACAGAGGTGGATGATCGCCGTCGGGTCGGCCAAGGGGTTGGCCTACCTGCACGAAGACTGTCGTCCAAAGATTATTCACCGAGACATCAAGGCAGCCAACATCCTTCTCGATTACAAATTCGAGCCAAAGGTTGCGGACTTTGGGCTAGCCAAGATCCAACCGGGAGACGACACACACGTTTCCACCCGCGTGATGGGCACCTTCGGCTACTTGGCGCCGGAGTATGCTGCTACTGGCAAAGTAAACGACAGATCAGACGTCTTCTCCTTCGGTGTCGTTCTTCTGGAGCTGATCACCGGGAAGAGGCCTGTCATTTCGACTGAGCCCTTCAACGACGAGACTCTGGTTTCTTGGGCAAGGCCTCAGCTGACAAAAGCTCTAGAGCAGCATGTCTACGACGATCTGATCGATCCAAAGCTTGACGCCTTGTACGACGCCCACGACATGCATCGGCTGATCTCCTGCGCTGCCGCCGCGGTGCGGCACACGGCACGCTCCCGCCCTCGCATGACCCAGATTGTGAGATACTTGGAGGGGGAGCTGTCAATAGATGACCTGAACGCCGGCGTCGCACCGGGGCAGAGCTCGCTGCGCTCGCAGGAGCACTCCGGCGACATGACGGAGCTGGTGCGGCGGCGGCTCAGGAGGGTCGCGTTCCCGCCGGGCAGCGGCGTCACCGTCACCGGCACCGGCGCCGTCACCGACAGCGGCTACCTGAGCGAGGCGACGAGCGAGTACGGGGTGAACCCATCCATCAGCTCGAGCAGCGGCGGCGACGACGACGACACGGCCGGCGAGGTGGTCGGCGGCGTCACCGCCACCAGCCGGCCGCACGCCGCCGCCGCCGCGTCCAGCCCGGACACGTCCGAGGTGGCGTCACCGCACGCCGGCGAGCTCGCCGCCGACGCCGCCAAGCCGATGAGCAGACGAACACGCCTCGGCCGCTTTCCGTGAGCGCACTGGATCTCTCTTTTTCACCGGTGGTAAGTGGTATAATTGTACATGCGTAAAAGTGGCTAATAGTGGATGAATTTTTCAGCTCATTTTTTCTTCGGTTTTAGCAAGGTTTTGTCTGAATTTATTGTCGCGATTAATTTCGCACTAAGGGCCTGTTCATTTTATCAAATTTTGGCAATACTAAATTTTAACAACTTTACCAAAATTTGATAAGGTTGAAAATGACATCAAAGTGAACAGGCCCTAAACGAAAAGAGAGCAAAGTTGGATTAGCAGTCAACGTGAACCACATGGGACGGATCAGTGATGAGTGAGCTGTACAGAACTTTCATGTTTCTTCCATTTGTTAGGTTGTCAATACACCTGTCCTTGAGAAGATGCCATGTGGATAATTATCATCCACGCCTCTGCTATCAGTCACTATCATTGGTCATGCAACACAAGCGTA]


>consensus_86#0 AGGATTTTCAGAGGCCAACCCAACCAAACAAACAACCTCCAAAAACCATCCCCCGGGATT ATCTCCGCGATCTCCTCTTCTCCCCCGCCGCCGCTGCTTTGCGGTTGCACCCGCCCATGT CCGCGCCGCCGCCGCCGCCGCCTAATGCTAGCACTCCTGCTCCTGCACCGCCGTTGCCTC CGTCTCTTGGTGCACCCGACCCGCCGCCACCACCACCACCTGTGATGCCATCTCGTCCGC CGCCGGCTGCTCCGCCTCCCTCGCCACCGGCAGCGTCTCCTCCTCCTCCTCCTGCTCCAC CGGTGGCGCCGCGGCCAACTCCGTCGCCTCCTCCTCCTCCACCGGTGATGCCGTCGAAGC CAGTGAAACCTGTACCGCCTTCGTCGCCTCCTCCTCCTCCGGTGATGCAGCCGCCGTCGC CATCTCCACCACTAATACCGCCGCCGCCGCCGCCTACTCCGGTGATGCCGGTGCTACCAC CGACGCCGTCCCCGCCTTCACCGGTGAATCCACCACCGCCATCGCCGTCCCCGCCGCCTT CTCCGGTGAACCCACTGCCGCCAATAACGTCACCACCTTCCCCGGTGTCACCACCTTCTC CGGCAAATCCACTGCCGCCTGCGACGTCACCACCTTCTCCGGCGAACCCACTGCCGCCTG CGACGTCACCACCTTCTCCGGCGAATCCACTGCCGCCGACGACGTCACCTCCTTCTCCAG CGCCGCCTCCAACGGTGCCTTCCCAACCACCGGAGGCTGCACCGGCGCCGACGACGAAGC CACCACCAACCCCGCTCCCACCAGCTCGATCGCCGCCAGCGCCATCTCCAGCTTCCCGCG AACCGTCTCCCTCGCCGTCGCCGTCAGTAGCACCACCGTCTCTTCCAATCTTCACCCCGT CACCCCCCGGTGGTGGCCGCGGCGCCGCCACTCCTTCGCCGCCGTCGTCGCGGCCGTCGC CTAGATCTCCGCCGCCGCCGTCCTCCGCCCCGCAAGGAGTGATGATCGCCATCGTCGCGG CCATCGTGGCGTTGCTCGTGCTCGGCGCAGTCGCCGCCGGGCTGCTGTGCTTCTGCTCGC GCCGCCGTCGCCGCCGCCGCCGCCGCCAACCAACATCGCCGGGTGATTTCCTCGGACCCT TACCGGTGACATCGCGTCATCACCAGCAATCACAATTCATCAAGCCAACAGTAACATACC CACCACAGCTGAATGCACACTCGCCGCTGCAAAGCAGCAGCAACTCCGACCCACCGTCAC CGCTGCTGCAACCGTCTCCACCTCCACCGGCGGCGAGCGGCGGCACGGTGTCGTACGGTG ACCTGGTGGCGGCGACGAACGGCTTCTCCGAGGGCAACCTGCTCGGGGAGGGCGGGTTCG GGCACGTGTACCGCGGCGAGCTGCTCCTGCACGACGGCCGGAGGCAGCCGGTGGCCATCA AGAAGCTCCGGCCGGGGAGCCGGCAGGGCGAGCGCGAGTTCCGCGCCGAGGTGGACATCA TCAGCCGCATCCACCACCGCAACCTCGTCTCCCTCGTGGGCTACTGCATCCACGCCGACC ACCGCCTCCTCGTCTACGAGTTCGTCCCCAACAAGACGCTGGACTTCCGCCTCCACGGGA GCAGCCGGCCGACGCTGGATTGGCCACAGAGGTGGATGATCGCCGTCGGGTCGGCCAAGG GGTTGGCCTACCTGCACGAAGACTGTCGTCCAAAGATTATTCACCGAGACATCAAGGCAG CCAACATCCTTCTCGATTACAAATTCGAGCCAAAGGTTGCGGACTTTGGGCTAGCCAAGA TCCAACCGGGAGACGACACACACGTTTCCACCCGCGTGATGGGCACCTTCGGCTACTTGG CGCCGGAGTATGCTGCTACTGGCAAAGTAAACGACAGATCAGACGTCTTCTCCTTCGGTG TCGTTCTTCTGGAGCTGATCACCGGGAAGAGGCCTGTCATTTCGACTGAGCCCTTCAACG ACGAGACTCTGGTTTCTTGGGCAAGGCCTCAGCTGACAAAAGCTCTAGAGCAGCATGTCT ACGACGATCTGATCGATCCAAAGCTTGACGCCTTGTACGACGCCCACGACATGCATCGGC TGATCTCCTGCGCTGCCGCCGCGGTGCGGCACACGGCACGCTCCCGCCCTCGCATGACCC AGATTGTGAGATACTTGGAGGGGGAGCTGTCAATAGATGACCTGAACGCCGGCGTCGCAC CGGGGCAGAGCTCGCTGCGCTCGCAGGAGCACTCCGGCGACATGACGGAGCTGGTGCGGC GGCGGCTCAGGAGGGTCGCGTTCCCGCCGGGCAGCGGCGTCACCGTCACCGGCACCGGCG CCGTCACCGACAGCGGCTACCTGAGCGAGGCGACGAGCGAGTACGGGGTGAACCCATCCA TCAGCTCGAGCAGCGGCGGCGACGACGACGACACGGCCGGCGAGGTGGTCGGCGGCGTCA CCGCCACCAGCCGGCCGCACGCCGCCGCCGCCGCGTCCAGCCCGGACACGTCCGAGGTGG CGTCACCGCACGCCGGCGAGCTCGCCGCCGACGCCGCCAAGCCGATGAGCAGACGAACAC GCCTCGGCCGCTTTCCGTGAGCGCACTGGATCTCTCTTTTTCACCGGTGGTAAGTGGTAT AATTGTACATGCGTAAAAGTGGCTAATAGTGGATGAATTTTTCAGCTCATTTTTTCTTCG GTTTTAGCAAGGTTTTGTCTGAATTTATTGTCGCGATTAATTTCGCACTAAGGGCCTGTT CATTTTATCAAATTTTGGCAATACTAAATTTTAACAACTTTACCAAAATTTGATAAGGTT GAAAATGACATCAAAGTGAACAGGCCCTAAACGAAAAGAGAGCAAAGTTGGATTAGCAGT CAACGTGAACCACATGGGACGGATCAGTGATGAGTGAGCTGTACAGAACTTTCATGTTTC TTCCATTTGTTAGGTTGTCAATACACCTGTCCTTGAGAAGATGCCATGTGGATAATTATC ATCCACGCCTCTGCTATCAGTCACTATCATTGGTCATGCAACACAAGCGTA



consensusID : consensus_86#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1309
fasta sequence
                              [CCCCTGCAGGTCCACTTCTTGCTATCAGATTTTCAACAGACTAGTACAGTGTCATAGTACAATCCAATTCTGACTTCTGACTTCATTTTTTAAAAAATATATATATATTGTGGATTCAGTGACAGCATCGCGTTACATCTCGTTAACTAATGGCTGATTATTCTGTAACTGTAAGGACTACTAAATTTGTTCTTCTTTTATGTTTTGGACGATGCAGGCAAGGCCTCAGCTGACAAAAGCTCTAGAGCAGCATGTCTACGACGATCTGATCGATCCAAGGCTTGACGCCTTGTACGACGCCCACGACATGCATCGGCTGATCTCCTGCGCTGCCGCCGCGGTGCGGCACACGGCACGCTCCCGCCCTCGCATGACCCAGGTGAGCCTCCCTTGGAGAAGAATAAAATGTCATGGTGTTACATATCAACTAAAATGGTTATTATTTTTTTTTAAAAAAATAATTAGATAGAATTGATATATGATATATTACTTCATCAATATATAAATTAAAATTTTGACTTCTACAAGTTGTAATAAAAACAATAACTTGTGAAGTCGAATTGGATTGATATATCTCATGCCAATCTATTTTATCATTTTCTTTAATTATTTTTATATAATTATTTAGTTGATATATAATAAAAAGGTGGATATGGATATTTAATTATTAGAATTATCTCCCTGCTGTGCAATGCAACTTGCGAAACGACCAAAGAAACAAGTTTCTCTTATTGACTTTTTGCCCAAAAACCTGAGTTCTTTTTTTCTGTTCTTGCAATGGACGAGCAGATTGTGAGATACTTGGAGGGGGAGCTGTCAATAGATGACCTGAACGCCGGCGTCGCACCGGGGCAGAGCTCGCTGCGCTCGCAGGAGCACTCCGGCGACATGACGGAGCTGGTGCGGCGGCGGCTCAGGAGGGTCGCGTTCCCACCGGGCAGCGGCGTCACCGCCACCGGCACCGGCGCCGTCACCGACAGCGGCTACCTGAGCGAGGCGACGAGCGAGTACGGGGTGAACCCATCCATCAGCTCGAGCAGCGGCGGCGACGACGACGACACGGCCGGCGAGGTGGTCGGCGGCGTCACCGCCACCAGCCGGCCGCACGCCGCCGCCGCCGCGTCCAGCCCGGACACGTCCGAGGTGGCGTCACCGCACGCCGGCGAGCTCGCCGCCGACGCCGCCAAGCCGATGAGCAGACGAACACGCCTCGGCCGCTTTCCGTGAGCGCACTGGATCTCTCTTTTTCACCGGTGGTAAGTGGTATAATTGTACATGCGTAAAAGTGGCTAATAGTGGATGAATTTTT]

[-] EMBL AK068854             [CCCCTGCAGGTCCACTTCTTGCTATCAGATTTTCAACAGACTAGTACAGTGTCATAGTACAATCCAATTCTGACTTCTGACTTCATTTTTTAAAAAATATATATATATTGTGGATTCAGTGACAGCATCGCGTTACATCTCGTTAACTAATGGCTGATTATTCTGTAACTGTAAGGACTACTAAATTTGTTCTTCTTTTATGTTTTGGACGATGCAGGCAAGGCCTCAGCTGACAAAAGCTCTAGAGCAGCATGTCTACGACGATCTGATCGATCCAAGGCTTGACGCCTTGTACGACGCCCACGACATGCATCGGCTGATCTCCTGCGCTGCCGCCGCGGTGCGGCACACGGCACGCTCCCGCCCTCGCATGACCCAGGTGAGCCTCCCTTGGAGAAGAATAAAATGTCATGGTGTTACATATCAACTAAAATGGTTATTATTTTTTTTTAAAAAAATAATTAGATAGAATTGATATATGATATATTACTTCATCAATATATAAATTAAAATTTTGACTTCTACAAGTTGTAATAAAAACAATAACTTGTGAAGTCGAATTGGATTGATATATCTCATGCCAATCTATTTTATCATTTTCTTTAATTATTTTTATATAATTATTTAGTTGATATATAATAAAAAGGTGGATATGGATATTTAATTATTAGAATTATCTCCCTGCTGTGCAATGCAACTTGCGAAACGACCAAAGAAACAAGTTTCTCTTATTGACTTTTTGCCCAAAAACCTGAGTTCTTTTTTTCTGTTCTTGCAATGGACGAGCAGATTGTGAGATACTTGGAGGGGGAGCTGTCAATAGATGACCTGAACGCCGGCGTCGCACCGGGGCAGAGCTCGCTGCGCTCGCAGGAGCACTCCGGCGACATGACGGAGCTGGTGCGGCGGCGGCTCAGGAGGGTCGCGTTCCCACCGGGCAGCGGCGTCACCGCCACCGGCACCGGCGCCGTCACCGACAGCGGCTACCTGAGCGAGGCGACGAGCGAGTACGGGGTGAACCCATCCATCAGCTCGAGCAGCGGCGGCGACGACGACGACACGGCCGGCGAGGTGGTCGGCGGCGTCACCGCCACCAGCCGGCCGCACGCCGCCGCCGCCGCGTCCAGCCCGGACACGTCCGAGGTGGCGTCACCGCACGCCGGCGAGCTCGCCGCCGACGCCGCCAAGCCGATGAGCAGACGAACACGCCTCGGCCGCTTTCCGTGAGCGCACTGGATCTCTCTTTTTCACCGGTGGTAAGTGGTATAATTGTACATGCGTAAAAGTGGCTAATAGTGGATGAATTTTT]


>consensus_86#1 CCCCTGCAGGTCCACTTCTTGCTATCAGATTTTCAACAGACTAGTACAGTGTCATAGTAC AATCCAATTCTGACTTCTGACTTCATTTTTTAAAAAATATATATATATTGTGGATTCAGT GACAGCATCGCGTTACATCTCGTTAACTAATGGCTGATTATTCTGTAACTGTAAGGACTA CTAAATTTGTTCTTCTTTTATGTTTTGGACGATGCAGGCAAGGCCTCAGCTGACAAAAGC TCTAGAGCAGCATGTCTACGACGATCTGATCGATCCAAGGCTTGACGCCTTGTACGACGC CCACGACATGCATCGGCTGATCTCCTGCGCTGCCGCCGCGGTGCGGCACACGGCACGCTC CCGCCCTCGCATGACCCAGGTGAGCCTCCCTTGGAGAAGAATAAAATGTCATGGTGTTAC ATATCAACTAAAATGGTTATTATTTTTTTTTAAAAAAATAATTAGATAGAATTGATATAT GATATATTACTTCATCAATATATAAATTAAAATTTTGACTTCTACAAGTTGTAATAAAAA CAATAACTTGTGAAGTCGAATTGGATTGATATATCTCATGCCAATCTATTTTATCATTTT CTTTAATTATTTTTATATAATTATTTAGTTGATATATAATAAAAAGGTGGATATGGATAT TTAATTATTAGAATTATCTCCCTGCTGTGCAATGCAACTTGCGAAACGACCAAAGAAACA AGTTTCTCTTATTGACTTTTTGCCCAAAAACCTGAGTTCTTTTTTTCTGTTCTTGCAATG GACGAGCAGATTGTGAGATACTTGGAGGGGGAGCTGTCAATAGATGACCTGAACGCCGGC GTCGCACCGGGGCAGAGCTCGCTGCGCTCGCAGGAGCACTCCGGCGACATGACGGAGCTG GTGCGGCGGCGGCTCAGGAGGGTCGCGTTCCCACCGGGCAGCGGCGTCACCGCCACCGGC ACCGGCGCCGTCACCGACAGCGGCTACCTGAGCGAGGCGACGAGCGAGTACGGGGTGAAC CCATCCATCAGCTCGAGCAGCGGCGGCGACGACGACGACACGGCCGGCGAGGTGGTCGGC GGCGTCACCGCCACCAGCCGGCCGCACGCCGCCGCCGCCGCGTCCAGCCCGGACACGTCC GAGGTGGCGTCACCGCACGCCGGCGAGCTCGCCGCCGACGCCGCCAAGCCGATGAGCAGA CGAACACGCCTCGGCCGCTTTCCGTGAGCGCACTGGATCTCTCTTTTTCACCGGTGGTAA GTGGTATAATTGTACATGCGTAAAAGTGGCTAATAGTGGATGAATTTTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_86#0      AGGATTTTCAGAGGCCAACCCAACCAAACAAACAACCTCCAAAAACCATCCCCCGGGATT 60
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      ATCTCCGCGATCTCCTCTTCTCCCCCGCCGCCGCTGCTTTGCGGTTGCACCCGCCCATGT 120
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      CCGCGCCGCCGCCGCCGCCGCCTAATGCTAGCACTCCTGCTCCTGCACCGCCGTTGCCTC 180
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      CGTCTCTTGGTGCACCCGACCCGCCGCCACCACCACCACCTGTGATGCCATCTCGTCCGC 240
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      CGCCGGCTGCTCCGCCTCCCTCGCCACCGGCAGCGTCTCCTCCTCCTCCTCCTGCTCCAC 300
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      CGGTGGCGCCGCGGCCAACTCCGTCGCCTCCTCCTCCTCCACCGGTGATGCCGTCGAAGC 360
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      CAGTGAAACCTGTACCGCCTTCGTCGCCTCCTCCTCCTCCGGTGATGCAGCCGCCGTCGC 420
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      CATCTCCACCACTAATACCGCCGCCGCCGCCGCCTACTCCGGTGATGCCGGTGCTACCAC 480
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      CGACGCCGTCCCCGCCTTCACCGGTGAATCCACCACCGCCATCGCCGTCCCCGCCGCCTT 540
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      CTCCGGTGAACCCACTGCCGCCAATAACGTCACCACCTTCCCCGGTGTCACCACCTTCTC 600
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      CGGCAAATCCACTGCCGCCTGCGACGTCACCACCTTCTCCGGCGAACCCACTGCCGCCTG 660
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      CGACGTCACCACCTTCTCCGGCGAATCCACTGCCGCCGACGACGTCACCTCCTTCTCCAG 720
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      CGCCGCCTCCAACGGTGCCTTCCCAACCACCGGAGGCTGCACCGGCGCCGACGACGAAGC 780
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      CACCACCAACCCCGCTCCCACCAGCTCGATCGCCGCCAGCGCCATCTCCAGCTTCCCGCG 840
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      AACCGTCTCCCTCGCCGTCGCCGTCAGTAGCACCACCGTCTCTTCCAATCTTCACCCCGT 900
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      CACCCCCCGGTGGTGGCCGCGGCGCCGCCACTCCTTCGCCGCCGTCGTCGCGGCCGTCGC 960
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      CTAGATCTCCGCCGCCGCCGTCCTCCGCCCCGCAAGGAGTGATGATCGCCATCGTCGCGG 1020
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      CCATCGTGGCGTTGCTCGTGCTCGGCGCAGTCGCCGCCGGGCTGCTGTGCTTCTGCTCGC 1080
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      GCCGCCGTCGCCGCCGCCGCCGCCGCCAACCAACATCGCCGGGTGATTTCCTCGGACCCT 1140
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      TACCGGTGACATCGCGTCATCACCAGCAATCACAATTCATCAAGCCAACAGTAACATACC 1200
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      CACCACAGCTGAATGCACACTCGCCGCTGCAAAGCAGCAGCAACTCCGACCCACCGTCAC 1260
consensus_86#1      --------------------------------------------------------CCCC 4
                                                                             * *

consensus_86#0      CGCTGCTGCAACCGTCTCCACCTCCACCGGCGGCGAGCGGCGGCACGGTGTCGTACGGTG 1320
consensus_86#1      TGCAGGTCCACTTCTTGCTATCAG-ATTTTCAACAGAC--TAGTACAGTGTCATAGTACA 61
                     ** * * **    *  * * *   *    *  *   *    * ** ***** **     

consensus_86#0      ACCTGGTGGCGGCGACGAACGGCTTCTCCGAGGGCAACCTGCTCGGGGAGGGCGGGTTCG 1380
consensus_86#1      ATCCAATTCTGACTTCTGACTTCATTTTTTAA---AAAATATATATATATTGTGGATTCA 118
                    * *   *   * *  *  **  * * *   *    **  *        *  * ** *** 

consensus_86#0      GGCACGTGTACCGCGGCGAGCTGCTCCTGCACGACGGCCGGAGGCAGCCGGTGGCCATCA 1440
consensus_86#1      GTGACA------GCATCGCGTTACATCT---CGTTAACTAATGGC------TGATTATT- 162
                    *  **       **  ** * * *  **   **    *    ***      **   **  

consensus_86#0      AGAAGCTCCGGCCGGGGAGCCGGCAGGGCGAGCGCGAGTTCCGCGCCGAGGTGGACATCA 1500
consensus_86#1      -----CTGTAACTGTAAGGACTACTAAATTTGTTCTTCTTTTATGTTTTGGACGATGCAG 217
                         **    * *    * *  *       *  *   **    *    **  **     

consensus_86#0      TCAGCCGCATCCACCACCGCAACCTCGTCTCCCTCGTGGGCTACTGCATCCACGCCGACC 1560
consensus_86#1      GCAAG-GCCTCAGCTGACAAAAGCTCTAGAGCAGCATGT-CTACGACGATCTGATCGATC 275
                     **   ** **  *   *  ** ***     *  * **  ****  *   *    *** *

consensus_86#0      ACCGCCTCCTCGTCTACGAGTTCGTCCCCAACAAGACGCTGGACTTCCGCCTCCACGGGA 1620
consensus_86#1      CAAGGCTTGACGCCTTGTACGACGCCCACGACATG-CATCGGCTGATCTCCTGCGCTGCC 334
                       * **   ** **   *   ** ** * *** * *   **     * *** * * *  

consensus_86#0      GCAGCCGGCCGACGCTGGATTGGCCACAGAGGTGGATGATCGCCGTCGGGTCGGCCAAGG 1680
consensus_86#1      GCCGCGGTGCGGCACACGGCACGCTCC-------------CGCCCTCGCATGACCCA--- 378
                    ** ** *  ** * *  *    **  *             **** ***  *   ***   

consensus_86#0      GGTTGGCCTACCTGCACGAAGACTGTCGTCCAAAGATTATTCACCGAGACATCAAGGCAG 1740
consensus_86#1      GGTGAGCCTCCCTTGGAGAAGAATAAAATGTCATGGTG--TTACATATCAACTAAAATGG 436
                    ***  **** ***    ***** *    *   * * *   * **  *   *  **    *

consensus_86#0      CCAACATCCTTCTCGATTACAAATTCGAGCCAAAGGTTGCGGACTTTGGGCTAGCCAAGA 1800
consensus_86#1      TTATTATTTTTTTTTAAAAAAATAATTAGATAGAATTGATATATGATATATTACTTCA-- 494
                      *  **  ** *  *  * **     **  * *  *     *   *    **    *  

consensus_86#0      TCCAACCGGGAGACGACACACACGTTTCCACCCGC-GTGATGGGCACCTTCGGCTACTTG 1859
consensus_86#1      TCAATATATAAATTAAAATTTTGACTTCTACAAGTTGTAATAAAAAC----AATAACTTG 550
                    ** *      *    * *       *** **  *  ** **    **        *****

consensus_86#0      GCGCCGGAGTATGCTGCTACTGGCAAAGTAAACGACAGATCAGACGTCTTCTCCTTCGGT 1919
consensus_86#1      ----TGAAGTCGAATTGGATTGATATATCTCATGCCA-ATCTATTTTATCATTTTCTTTA 605
                         * ***    *   * **  * *    * * ** ***     * *  *  *     

consensus_86#0      GTCGTTCTTCTGGAGCTGATCACCGGGAAGAGGCCTGTCATTTCGACTGAGCCCTTCAAC 1979
consensus_86#1      ATTATTTTTATATAATTATTTAGTTGATATATAATAAAAAGGTGGATATGGATATTTAAT 665
                     *  ** ** *  *  *  * *   *  * *        *  * **    *   ** ** 

consensus_86#0      GACGAGACTCTGGTTTCT--TGGGCAAGGCCTCAGCTGACAAAAGCTCTAGAGCAGCATG 2037
consensus_86#1      TATTAGAATTATCTCCCTGCTGTGCAATGC---AACTTGCGAAACGACCAAAGAAACAAG 722
                     *  *** *    *  **  ** **** **   * **  * ***   * * ** * ** *

consensus_86#0      TCTACGACGATCTGATCGATCCAAAGCTTGACGCCTTGTACGACGCCCACGACATGCATC 2097
consensus_86#1      TTTC------TCTTATTGA--------------CTTTTTGC----CCAAAAACCTGAGTT 758
                    * *       *** ** **              * ** * *    ** *  ** **  * 

consensus_86#0      GGCTGATCTCCTGCGCTGCCGCCGCGGTGCGGCACACGGCACGCTCCCGCCCTCGCATGA 2157
consensus_86#1      --CTTTTTTTCTGTTCT----------TGCAATGGACGAG-------------------- 786
                      **  * * ***  **          ***     ***                      

consensus_86#0      CCCAGATTGTGAGATACTTGGAGGGGGAGCTGTCAATAGATGACCTGAACGCCGGCGTCG 2217
consensus_86#1      --CAGATTGTGAGATACTTGGAGGGGGAGCTGTCAATAGATGACCTGAACGCCGGCGTCG 844
                      **********************************************************

consensus_86#0      CACCGGGGCAGAGCTCGCTGCGCTCGCAGGAGCACTCCGGCGACATGACGGAGCTGGTGC 2277
consensus_86#1      CACCGGGGCAGAGCTCGCTGCGCTCGCAGGAGCACTCCGGCGACATGACGGAGCTGGTGC 904
                    ************************************************************

consensus_86#0      GGCGGCGGCTCAGGAGGGTCGCGTTCCCGCCGGGCAGCGGCGTCACCGTCACCGGCACCG 2337
consensus_86#1      GGCGGCGGCTCAGGAGGGTCGCGTTCCCACCGGGCAGCGGCGTCACCGCCACCGGCACCG 964
                    **************************** ******************* ***********

consensus_86#0      GCGCCGTCACCGACAGCGGCTACCTGAGCGAGGCGACGAGCGAGTACGGGGTGAACCCAT 2397
consensus_86#1      GCGCCGTCACCGACAGCGGCTACCTGAGCGAGGCGACGAGCGAGTACGGGGTGAACCCAT 1024
                    ************************************************************

consensus_86#0      CCATCAGCTCGAGCAGCGGCGGCGACGACGACGACACGGCCGGCGAGGTGGTCGGCGGCG 2457
consensus_86#1      CCATCAGCTCGAGCAGCGGCGGCGACGACGACGACACGGCCGGCGAGGTGGTCGGCGGCG 1084
                    ************************************************************

consensus_86#0      TCACCGCCACCAGCCGGCCGCACGCCGCCGCCGCCGCGTCCAGCCCGGACACGTCCGAGG 2517
consensus_86#1      TCACCGCCACCAGCCGGCCGCACGCCGCCGCCGCCGCGTCCAGCCCGGACACGTCCGAGG 1144
                    ************************************************************

consensus_86#0      TGGCGTCACCGCACGCCGGCGAGCTCGCCGCCGACGCCGCCAAGCCGATGAGCAGACGAA 2577
consensus_86#1      TGGCGTCACCGCACGCCGGCGAGCTCGCCGCCGACGCCGCCAAGCCGATGAGCAGACGAA 1204
                    ************************************************************

consensus_86#0      CACGCCTCGGCCGCTTTCCGTGAGCGCACTGGATCTCTCTTTTTCACCGGTGGTAAGTGG 2637
consensus_86#1      CACGCCTCGGCCGCTTTCCGTGAGCGCACTGGATCTCTCTTTTTCACCGGTGGTAAGTGG 1264
                    ************************************************************

consensus_86#0      TATAATTGTACATGCGTAAAAGTGGCTAATAGTGGATGAATTTTTCAGCTCATTTTTTCT 2697
consensus_86#1      TATAATTGTACATGCGTAAAAGTGGCTAATAGTGGATGAATTTTT--------------- 1309
                    *********************************************               

consensus_86#0      TCGGTTTTAGCAAGGTTTTGTCTGAATTTATTGTCGCGATTAATTTCGCACTAAGGGCCT 2757
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      GTTCATTTTATCAAATTTTGGCAATACTAAATTTTAACAACTTTACCAAAATTTGATAAG 2817
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      GTTGAAAATGACATCAAAGTGAACAGGCCCTAAACGAAAAGAGAGCAAAGTTGGATTAGC 2877
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      AGTCAACGTGAACCACATGGGACGGATCAGTGATGAGTGAGCTGTACAGAACTTTCATGT 2937
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      TTCTTCCATTTGTTAGGTTGTCAATACACCTGTCCTTGAGAAGATGCCATGTGGATAATT 2997
consensus_86#1      ------------------------------------------------------------
                                                                                

consensus_86#0      ATCATCCACGCCTCTGCTATCAGTCACTATCATTGGTCATGCAACACAAGCGTA 3051
consensus_86#1      ------------------------------------------------------
                                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)