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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8615#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1448 fasta sequence
[CCAGGGCCCTCCTGCCCGTCGGCGGCGCCGCCGCCGTCGCCGTTCCTCGACGGCTGCGCTCCGGGGAAGCCTCGTCGACGTCGCTCAGCGGCCCCGTATCGGATGGCGCCCGCCTCGTCCGCCGGATGCAGCTCCGCCCTGCTCCCCTCCTCGGTTCGTCAACTTGCGCGCTGCCTTCCCTGCGGGGTAAGCGGCTCATCCGCACCCCGGCTGCTTCCTCCTCCTCCTCCTCGTTGGACTCCACCGGGGAAGCAAAGCCTGTGGGATTTGCAGAGAGATACCCTGCTCTTGTCACCGGTTTCTTTTTCTTCATGTGGTATGCTTACTCACCTGAGCGCACTTTAGAATTTACAATTGCAGGTATTTTCTGAACGTGATATTTAACATCCTTAACAAGAAGATCTTCGACTACTTCCCCTATCCATACCGATCAACTCAACGGTTCTGAAGCTACTGTTCCCAGTTGCTGTCTGCCATGCTATTGGTCATGTAACAAGCACCGTGTCCTTTGCTGCTGTAGCTGTCTCATTTGCCCACACCATTAAAGCTCTTGAACCATTTTTCAATGCGGCTGCTTCACAGTTTATCCTTGGCCAGCAAGTTCCGTTGACGCTGTGGTTATCTCTTGCTCCGGTTGTGATAGGTGTTTCAATGGCATCTCTCACTGAACTTTCATTCAATTGGACTGGTTTCGTTAATGCCATGATTTCTAATATCTCCTTCACATTACGGAGCGTTTATTCCAAGAAGGTTATGACTGACATGGATAGCACCAACCTGTATGCGTACATCTCAATAATTGCTCTCCTTGTCTGCATCCCTCCTGCAATTATTATTGAAGGACCTCAACTAGTGCAGCATGGATTCAAAGATGCTATTGCTAAAGTTGGATTAGCAAAGTTGGTTTCTAATCTCCTTGTGGTGGGCTTGTTCTATCACCTTTATAACCAGGTTGCTACAAACACATTAGAAAGGGTGACCCCTCTAACACATGCTGTTGGCAATGTGTTAAAACGTGTCTTCGTCATTGGCTTCTCAATCATTGCATTCGGCAACAAGATCACCACACAAACAGGAATTGGCACTTGCATTGCCATAGCTGGTGTTGCACTCTATTCTTATATCAAGGCTAAGATTGAAGAAGAGAAAACGCAAATGAAGAGCGCATAAGGAGTTGAATCTGTGGATATAGTTGGGTAGCTGCTTTGATCGATCTGTATTGCCTCCGAGAAATAAAATGAGCTGTAAGATTTATAACAATCTAGGTGCCTGCTGTATCTCATCTTGTTTGTTATTGTCGATTTCGCTTTGAACAGCAAAAGCTACCGATGCATTTTTTTTTTTTTGTAAATTATAACTGCTAAAAACCCGCAGAAACAAAGCCTCCATCATCCCATTTTCCCCTTCCTTGGCTATTTGGACTTTTGATGATGCTCTTAAGTTTGAGC]
[+] EMBL AK073395 [CCAGGGCCCTCCTGCCCGTCGGCGGCGCCGCCGCCGTCGCCGTTCCTCGACGGCTGCGCTCCGGGGAAGCCTCGTCGACGTCGCTCAGCGGCCCCGTATCGGATGGCGCCCGCCTCGTCCGCCGGATGCAGCTCCGCCCTGCTCCCCTCCTCGGTTCGTCAACTTGCGCGCTGCCTTCCCTGCGGGGTAAGCGGCTCATCCGCACCCCGGCTGCTTCCTCCTCCTCCTCCTCGTTGGACTCCACCGGGGAAGCAAAGCCTGTGGGATTTGCAGAGAGATACCCTGCTCTTGTCACCGGTTTCTTTTTCTTCATGTGGTATGCTTACTCACCTGAGCGCACTTTAGAATTTACAATTGCAGGTATTTTCTGAACGTGATATTTAACATCCTTAACAAGAAGATCTTCGACTACTTCCCCTATCCATACCGATCAACTCAACGGTTCTGAAGCTACTGTTCCCAGTTGCTGTCTGCCATGCTATTGGTCATGTAACAAGCACCGTGTCCTTTGCTGCTGTAGCTGTCTCATTTGCCCACACCATTAAAGCTCTTGAACCATTTTTCAATGCGGCTGCTTCACAGTTTATCCTTGGCCAGCAAGTTCCGTTGACGCTGTGGTTATCTCTTGCTCCGGTTGTGATAGGTGTTTCAATGGCATCTCTCACTGAACTTTCATTCAATTGGACTGGTTTCGTTAATGCCATGATTTCTAATATCTCCTTCACATTACGGAGCGTTTATTCCAAGAAGGTTATGACTGACATGGATAGCACCAACCTGTATGCGTACATCTCAATAATTGCTCTCCTTGTCTGCATCCCTCCTGCAATTATTATTGAAGGACCTCAACTAGTGCAGCATGGATTCAAAGATGCTATTGCTAAAGTTGGATTAGCAAAGTTGGTTTCTAATCTCCTTGTGGTGGGCTTGTTCTATCACCTTTATAACCAGGTTGCTACAAACACATTAGAAAGGGTGACCCCTCTAACACATGCTGTTGGCAATGTGTTAAAACGTGTCTTCGTCATTGGCTTCTCAATCATTGCATTCGGCAACAAGATCACCACACAAACAGGAATTGGCACTTGCATTGCCATAGCTGGTGTTGCACTCTATTCTTATATCAAGGCTAAGATTGAAGAAGAGAAAACGCAAATGAAGAGCGCATAAGGAGTTGAATCTGTGGATATAGTTGGGTAGCTGCTTTGATCGATCTGTATTGCCTCCGAGAAATAAAATGAGCTGTAAGATTTATAACAATCTAGGTGCCTGCTGTATCTCATCTTGTTTGTTATTGTCGATTTCGCTTTGAACAGCAAAAGCTACCGATGCATTTTTTTTTTTTTGTAAATTATAACTGCTAAAAACCCGCAGAAACAAAGCCTCCATCATCCCATTTTCCCCTTCCTTGGCTATTTGGACTTTTGATGATGCTCTTAAGTTTGAGC]
consensusID : consensus_8615#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1445 fasta sequence
[CGGCGGCCAGGGCCCTCCTGCCCGTCGGCGGCGCCGCCGCCGTCGCCGTTCCTCGACGGCTGCGCTCCGGGGAAGCCTCGTCGACGTCGCTCAGCGGCCCCGTATCGGATGGCGCCCGCCTCGTCCGCCGGATGCAGCTCCGCCCTGCTCCCCTCCTCGGTTCGTCAACTTGCGCGCTGCCTTCCCTGCGGGGTAAGCGGCTCATCCGCACCCCGGCTGCTTCCTCCTCCTCCTCCTCGTTGGACTCCACCGGGGAAGCAAAGCCTGTGGGATTTGCAGAGAGATACCCTGCTCTTGTCACCGGTTTCTTTTTCTTCATGTGGTATTTTCTGAACGTGATATTTAACATCCTTAACAAGAAGATCTTCGACTACTTCCCCTATCCATATTTTGTGTCGGTGAGCCATCTTTTGGTAGGAGTCTTGTACTGCCTTGTCGGCTGGAGTTTTGGTCTCCCAAAGCGCGCGCCGATCAACTCAACGGTTCTGAAGCTACTGTTCCCAGTTGCTGTCTGCCATGCTATTGGTCATGTAACAAGCACCGTGTCCTTTGCTGCTGTAGCTGTCTCATTTGCCCACACCATTAAAGCTCTTGAACCATTTTTCAATGCGGCTGCTTCACAGTTTATCCTTGGCCAGCAAGTTCCATTGACGCTGTGGTTATCTCTTGCTCCGGTTGTGATAGGTGTTTCAATGGCATCTCTCACTGAACTTTCATTCAATTGGACTGGTTTCGTTAATGCCATGATTTCTAATATCTCCTTCACATTACGGAGCGTTTATTCCAAGAAGGCTATGACTGACATGGATAGCACCAACCTGTATGCGTACATCTCAATAATTGCTCTCCTTGTCTGCATCCCTCCTGCAATTATTATTGAAGGACCTCAACTAGTGCAGCATGGATTCAAAGATGCTATTGCTAAAGTTGGATTAGCAAAGTTGGTTTCTAATCTCCTTGTGGTGGGCTTGTTCTATCACCTTTATAACCAGGTTGCTACAAACACATTAGAAAGGGTGACCCCTCTAACACATGCTGTTGGCAATGTGTTAAAACGTGTCTTCGTCATTGGCTTCTCAATCATTGCATTCGGCAACAAGATCACCACACAAACAGGAATTGGCACTTGCATTGCCATAGCTGGTGTTGCACTCTATTCTTATATCAAGGCTAAGATTGAAGAAGAGAAAACGCAAATGAAGAGCGCATAAGGAGTTGAATCTGTGGATATAGTTGGGTAGCTGCTTTGATCGATCTGTATTGCCTCCGAGAAATAAAATGAGCTGTAAGATTTATAACAATCTAGGTGCCTGCTGTATCTCATCTTGTTTGTTATTGTCGATTTCGCTTTGAACAGCAAAAGCTACCGATGCATTTTTTTTTTTTTGTAAATTATAACTGCTAAAAACCCGCAGAAACAAAGCCTCCATCATCCCATTTTCCCC]
[+] EMBL AK059788 [CGGCGGCCAGGGCCCTCCTGCCCGTCGGCGGCGCCGCCGCCGTCGCCGTTCCTCGACGGCTGCGCTCCGGGGAAGCCTCGTCGACGTCGCTCAGCGGCCCCGTATCGGATGGCGCCCGCCTCGTCCGCCGGATGCAGCTCCGCCCTGCTCCCCTCCTCGGTTCGTCAACTTGCGCGCTGCCTTCCCTGCGGGGTAAGCGGCTCATCCGCACCCCGGCTGCTTCCTCCTCCTCCTCCTCGTTGGACTCCACCGGGGAAGCAAAGCCTGTGGGATTTGCAGAGAGATACCCTGCTCTTGTCACCGGTTTCTTTTTCTTCATGTGGTATTTTCTGAACGTGATATTTAACATCCTTAACAAGAAGATCTTCGACTACTTCCCCTATCCATATTTTGTGTCGGTGAGCCATCTTTTGGTAGGAGTCTTGTACTGCCTTGTCGGCTGGAGTTTTGGTCTCCCAAAGCGCGCGCCGATCAACTCAACGGTTCTGAAGCTACTGTTCCCAGTTGCTGTCTGCCATGCTATTGGTCATGTAACAAGCACCGTGTCCTTTGCTGCTGTAGCTGTCTCATTTGCCCACACCATTAAAGCTCTTGAACCATTTTTCAATGCGGCTGCTTCACAGTTTATCCTTGGCCAGCAAGTTCCATTGACGCTGTGGTTATCTCTTGCTCCGGTTGTGATAGGTGTTTCAATGGCATCTCTCACTGAACTTTCATTCAATTGGACTGGTTTCGTTAATGCCATGATTTCTAATATCTCCTTCACATTACGGAGCGTTTATTCCAAGAAGGCTATGACTGACATGGATAGCACCAACCTGTATGCGTACATCTCAATAATTGCTCTCCTTGTCTGCATCCCTCCTGCAATTATTATTGAAGGACCTCAACTAGTGCAGCATGGATTCAAAGATGCTATTGCTAAAGTTGGATTAGCAAAGTTGGTTTCTAATCTCCTTGTGGTGGGCTTGTTCTATCACCTTTATAACCAGGTTGCTACAAACACATTAGAAAGGGTGACCCCTCTAACACATGCTGTTGGCAATGTGTTAAAACGTGTCTTCGTCATTGGCTTCTCAATCATTGCATTCGGCAACAAGATCACCACACAAACAGGAATTGGCACTTGCATTGCCATAGCTGGTGTTGCACTCTATTCTTATATCAAGGCTAAGATTGAAGAAGAGAAAACGCAAATGAAGAGCGCATAAGGAGTTGAATCTGTGGATATAGTTGGGTAGCTGCTTTGATCGATCTGTATTGCCTCCGAGAAATAAAATGAGCTGTAAGATTTATAACAATCTAGGTGCCTGCTGTATCTCATCTTGTTTGTTATTGTCGATTTCGCTTTGAACAGCAAAAGCTACCGATGCATTTTTTTTTTTTTGTAAATTATAACTGCTAAAAACCCGCAGAAACAAAGCCTCCATCATCCCATTTTCCCC]
consensusID : consensus_8615#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1337 fasta sequence
[CCGTCGGCGGCGCCGCCGCCGTCGCCGTTCCTCGACGGCTGCGCTCCGGGGAAGCCTCGTCGACGTCGCTCAGCGGCCCCGTATCGGATGGCGCCCGCCTCGTCCGCCGGATGCAGCTCCGCCCTGCTCCCCTCCTCGGTTCGTCAACTTGCGCGCTGCCTTCCCTGCGGGGTAAGCGGCTCATCCGCACCCCGGCTGCTTCCTCCTCCTCCTCCTCGTTGGACTCCACCGGGGAAGCAAAGCCTGTAGGATTTGCAGAGAGATACCCTGCTCTTGTCACCGGTTTCTTTTTCTTCATGTGGTATGCTTACTCACCTGAGCGCACTTTAGAATTTACAATTGCAGATCTTCGACTACTTCCCCTATCCATATTTTGTGTCGGTGAGCCATCTTTTGGTAGGAGTCTTGTACTGCCTTGTCGGCTGGAGTTTTGGTCTCCCAAAGCGCGCGCCGATCAACTCAACGGTTCTGAAGCTACTGTTCCCAGTTGCTGTCTGCCATGCTATTGGTCATGTAACAAGCACCGTGTCCTTTGCTGCTGTAGCTGTCTCATTTGCCCACACCATTAAAGCTCTTGAACCATTTTTCAATGCGGCTGCTTCACAGTTTATCCTTGGCCAGCAAGTTCCATTGACGCTGTGGTTATCTCTTGCTCCGGTTGTGATAGACTGACATGGATAGCACCGACCTGTATGCGTACATCTCAATAATTGCTCTCCTTGTCTGCATCCCTCCTGCGATTATTATTGAAGGACCTCAACTAGTGCAGCATGGATTCGAAGATGCTATTGCTAAAGTTGGATTAGCAAAGTTGGTTTCTAATCTCCTTGTGGTGGGCTTGTTCTATCACCTTTATAACCAGGTTGCTACAAACACATTAGAAAGGGTGACCCCTCTAACACATGCTGTTGGCAATGTGTTAAAACGTGTCTTCGTCATTGGCTTCTCAATCATTGCATTCGGCAACAAGATCACCACACAAACAGGAATTGGCACTTGCATTGCCATAGCTGGTGTTGCACTCTATTCTTATATCAAGGCTAAGATTGAAGAAGAGAAAACGCAAATGAAGAGCGCATAAGGAGTTGAATCTGTGGATATAGTTGGGTAGCTGCTTTGATCGATCTGTATTGCCTCCGAGAAATAAAATGAGCTGTAAGATTTATAACAATCTAGGTGCCTGCTGTATCTCATCTTGTTTGTTATTGTCGATTTCGCTTTGAACAGCAAAAGCTACCGATGCATTTTTTTTTTTTTTGTAAATTATAACTGCTAAAAACCCGCAGAAACAAAGCCTCCATCATCCCATTTTCCCCTTCCTTGGCTGAAAAAAAGGA]
[+] EMBL CB654467 [CCGTCGGCGGCGCCGCCGCCGTCGCCGTTCCTCGACGGCTGCGCTCCGGGGAAGCCTCGTCGACGTCGCTCAGCGGCCCCGTATCGGATGGCGCCCGCCTCGTCCGCCGGATGCAGCTCCGCCCTGCTCCCCTCCTCGGTTCGTCAACTTGCGCGCTGCCTTCCCTGCGGGGTAAGCGGCTCATCCGCACCCCGGCTGCTTCCTCCTCCTCCTCCTCGTTGGACTCCACCGGGGAAGCAAAGCCTGTAGGATTTGCAGAGAGATACCCTGCTCTTGTCACCGGTTTCTTTTTCTTCATGTGGTATGCTTACTCACCTGAGCGCACTTTAGAATTTACAATTGCAGATCTTCGACTACTTCCCCTATCCATATTTTGTGTCGGTGAGCCATCTTTTGGTAGGAGTCTTGTACTGCCTTGTCGGCTGGAGTTTTGGTCTCCCAAAGCGCGCGCCGATCAACTCAACGGTTCTGAAGCTACTGTTCCCAGTTGCTGTCTGCCATGCTATTGGTCATGTAACAAGCACCGTGTCCTTTGCTGCTGTAGCTGTCTCATTTGCCCACACCATTAAAGCTCTTGAACCATTTTTCAATGCGGCTGCTTCACAGTTTATCCTTGGCCAGCAAGTTCCATTGACGCTGTGGTTATCTCTTGCTCCGGTTGTGATAGACTGACATGGATAGCACCGACCTGTATGCGTACATCTCAATAATTGCTCTCCTTGTCTGCATCCCTCCTGCGATTATTATTGAAGGACCTCAACTAGTGCAGCATGGATTCGAAGA ]
[-] EMBL CB654468 [ CTGTAGCTGTCTCATTTGCCCACACCATTAAAGCTCTTGAACCATTTTTCAATGCGGCTGCTTCACAGTTTATCCTTGGCCAGCAAGTTCCATTGACGCTGTGGTTATCTCTTGCTCCGGTTGTGATAGACTGACATGGATAGCACCAACCTGTATGCGTACATCTCAATAATTGCTCTCCTTGTCTGCATCCCTCCTGCAATTATTATTGAAGGACCTCAACTAGTGCAGCATGGATTCAAAGATGCTATTGCTAAAGTTGGATTAGCAAAGTTGGTTTCTAATCTCCTTGTGGTGGGCTTGTTCTATCACCTTTATAACCAGGTTGCTACAAACACATTAGAAAGGGTGACCCCTCTAACACATGCTGTTGGCAATGTGTTAAAACGTGTCTTCGTCATTGGCTTCTCAATCATTGCATTCGGCAACAAGATCACCACACAAACAGGAATTGGCACTTGCATTGCCATAGCTGGTGTTGCACTCTATTCTTATATCAAGGCTAAGATTGAAGAAGAGAAAACGCAAATGAAGAGCGCATAAGGAGTTGAATCTGTGGATATAGTTGGGTAGCTGCTTTGATCGATCTGTATTGCCTCCGAGAAATAAAATGAGCTGTAAGATTTATAACAATCTAGGTGCCTGCTGTATCTCATCTTGTTTGTTATTGTCGATTTCGCTTTGAACAGCAAAAGCTACCGATGCATTTTTTTTTTTTTTGTAAATTATAACTGCTAAAAACCCGCAGAAACAAAGCCTCCATCATCCCATTTTCCCCTTCCTTGGCTGAAAAAAAGGA]
consensusID : consensus_8615#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 436 fasta sequence
[TGACCCCTCTAACACATGCTGTTGGGCNATGTGTTAAAACCGTGTCTTCGTCATTGGCTTCTCNATCACTTGCACTTCGGCNACCCAGATCACCCACACCCAACCCGGAATTGGCANCTTGCCCTTGCCATAGCCTGGTGTTGCNCTCTATTCTTATATCCAGGCTAAGATTGAAGAAGAGAAAACCCCAATGAAGAGCGCATAAGGAGTTGAATCTGTGGATATAGTTGGGTACTGCTTTGATCGATCTGTATTGCCTCCGAGAAATATAAATGAGCTGTAAGATTTATACACCATCTAGGNGCCTGCTGTATCTCATCTTGTTTGTTATTGTCGATTTCGCTTTGACCAGCCAAAGCTACCGATCCCNTTTTTTTTTGTTGTGTAAATTATAACTGGCTAAAGACCCCAGGAAACCCAANCCTCCATGCATCCA]
[+] EMBL BM420541 [TGACCCCTCTAACACATGCTGTTGGGCNATGTGTTAAAACCGTGTCTTCGTCATTGGCTTCTCNATCACTTGCACTTCGGCNACCCAGATCACCCACACCCAACCCGGAATTGGCANCTTGCCCTTGCCATAGCCTGGTGTTGCNCTCTATTCTTATATCCAGGCTAAGATTGAAGAAGAGAAAACCCCAATGAAGAGCGCATAAGGAGTTGAATCTGTGGATATAGTTGGGTACTGCTTTGATCGATCTGTATTGCCTCCGAGAAATATAAATGAGCTGTAAGATTTATACACCATCTAGGNGCCTGCTGTATCTCATCTTGTTTGTTATTGTCGATTTCGCTTTGACCAGCCAAAGCTACCGATCCCNTTTTTTTTTGTTGTGTAAATTATAACTGGCTAAAGACCCCAGGAAACCCAANCCTCCATGCATCCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8615#1 CGGCGGCCAGGGCCCTCCTGCCCGTCGGCGGCGCCGCCGCCGTCGCCGTTCCTCGACGGC 60
consensus_8615#2 ---------------------CCGTCGGCGGCGCCGCCGCCGTCGCCGTTCCTCGACGGC 39
consensus_8615#0 ------CCAGGGCCCTCCTGCCCGTCGGCGGCGCCGCCGCCGTCGCCGTTCCTCGACGGC 54
consensus_8615#3 ------------------------------------------------------------
consensus_8615#1 TGCGCTCCGGGGAAGCCTCGTCGACGTCGCTCAGCGGCCCCGTATCGGATGGCGCCCGCC 120
consensus_8615#2 TGCGCTCCGGGGAAGCCTCGTCGACGTCGCTCAGCGGCCCCGTATCGGATGGCGCCCGCC 99
consensus_8615#0 TGCGCTCCGGGGAAGCCTCGTCGACGTCGCTCAGCGGCCCCGTATCGGATGGCGCCCGCC 114
consensus_8615#3 ------------------------------------------------------------
consensus_8615#1 TCGTCCGCCGGATGCAGCTCCGCCCTGCTCCCCTCCTCGGTTCGTCAACTTGCGCGCTGC 180
consensus_8615#2 TCGTCCGCCGGATGCAGCTCCGCCCTGCTCCCCTCCTCGGTTCGTCAACTTGCGCGCTGC 159
consensus_8615#0 TCGTCCGCCGGATGCAGCTCCGCCCTGCTCCCCTCCTCGGTTCGTCAACTTGCGCGCTGC 174
consensus_8615#3 ------------------------------------------------------------
consensus_8615#1 CTTCCCTGCGGGGTAAGCGGCTCATCCGCACCCCGGCTGCTTCCTCCTCCTCCTCCTCGT 240
consensus_8615#2 CTTCCCTGCGGGGTAAGCGGCTCATCCGCACCCCGGCTGCTTCCTCCTCCTCCTCCTCGT 219
consensus_8615#0 CTTCCCTGCGGGGTAAGCGGCTCATCCGCACCCCGGCTGCTTCCTCCTCCTCCTCCTCGT 234
consensus_8615#3 ------------------------------------------------------------
consensus_8615#1 TGGACTCCACCGGGGAAGCAAAGCCTGTGGGATTTGCAGAGAGATACCCTGCTCTTGTCA 300
consensus_8615#2 TGGACTCCACCGGGGAAGCAAAGCCTGTAGGATTTGCAGAGAGATACCCTGCTCTTGTCA 279
consensus_8615#0 TGGACTCCACCGGGGAAGCAAAGCCTGTGGGATTTGCAGAGAGATACCCTGCTCTTGTCA 294
consensus_8615#3 ------------------------------------------------------------
consensus_8615#1 CCGGTTTCTTTTTCTTCATGTGGTAT-TTTCTGAACGTGA---TATTTAACATCCTTAAC 356
consensus_8615#2 CCGGTTTCTTTTTCTTCATGTGGTATGCTTACTCACCTGAGCGCACTTTAGAATTTACAA 339
consensus_8615#0 CCGGTTTCTTTTTCTTCATGTGGTATGCTTACTCACCTGAGCGCACTTTAGAATTTACAA 354
consensus_8615#3 ------------------------------------------------------------
consensus_8615#1 AAGAAGATCTTCGACTACTTCCCCTATCCATATTTTGTGTCGGTGAGCCATCTTTTGGTA 416
consensus_8615#2 TTGCAGATCTTCGACTACTTCCCCTATCCATATTTTGTGTCGGTGAGCCATCTTTTGGTA 399
consensus_8615#0 TTGCAGGTATT-------TTCTGAACGTGATATTTAA-----------CATCCTTAACAA 396
consensus_8615#3 ------------------------------------------------------------
consensus_8615#1 GGAGTCTTGTACTGCCTTGTCGGCTGGAGTTTTGGTCTCCCAAAGCGCGCGCCGATCAAC 476
consensus_8615#2 GGAGTCTTGTACTGCCTTGTCGGCTGGAGTTTTGGTCTCCCAAAGCGCGCGCCGATCAAC 459
consensus_8615#0 GAAGATCT-----------TCGACTA----------CTTCCCCTATCCATACCGATCAAC 435
consensus_8615#3 ------------------------------------------------------------
consensus_8615#1 TCAACGGTTCTGAAGCTACTGTTCCCAGTTGCTGTCTGCCATGCTATTGGTCATGTAACA 536
consensus_8615#2 TCAACGGTTCTGAAGCTACTGTTCCCAGTTGCTGTCTGCCATGCTATTGGTCATGTAACA 519
consensus_8615#0 TCAACGGTTCTGAAGCTACTGTTCCCAGTTGCTGTCTGCCATGCTATTGGTCATGTAACA 495
consensus_8615#3 ------------------------------------------------------------
consensus_8615#1 AGCACCGTGTCCTTTGCTGCTGTAGCTGTCTCATTTGCCCACACCATTAAAGCTCTTGAA 596
consensus_8615#2 AGCACCGTGTCCTTTGCTGCTGTAGCTGTCTCATTTGCCCACACCATTAAAGCTCTTGAA 579
consensus_8615#0 AGCACCGTGTCCTTTGCTGCTGTAGCTGTCTCATTTGCCCACACCATTAAAGCTCTTGAA 555
consensus_8615#3 ------------------------------------------------------------
consensus_8615#1 CCATTTTTCAATGCGGCTGCTTCACAGTTTATCCTTGGCCAGCAAGTTCCATTGACGCTG 656
consensus_8615#2 CCATTTTTCAATGCGGCTGCTTCACAGTTTATCCTTGGCCAGCAAGTTCCATTGACGCTG 639
consensus_8615#0 CCATTTTTCAATGCGGCTGCTTCACAGTTTATCCTTGGCCAGCAAGTTCCGTTGACGCTG 615
consensus_8615#3 ------------------------------------------------------------
consensus_8615#1 TGGTTATCTCTTGCTCCGGTTGTGATAGGTGTTTCAATGGCATCTCTCACTGAACTTTCA 716
consensus_8615#2 TGGTTATCTCTTGCTCCGGTTGTGATAG-------------------------------- 667
consensus_8615#0 TGGTTATCTCTTGCTCCGGTTGTGATAGGTGTTTCAATGGCATCTCTCACTGAACTTTCA 675
consensus_8615#3 ------------------------------------------------------------
consensus_8615#1 TTCAATTGGACTGGTTTCGTTAATGCCATGATTTCTAATATCTCCTTCACATTACGGAGC 776
consensus_8615#2 ------------------------------------------------------------
consensus_8615#0 TTCAATTGGACTGGTTTCGTTAATGCCATGATTTCTAATATCTCCTTCACATTACGGAGC 735
consensus_8615#3 ------------------------------------------------------------
consensus_8615#1 GTTTATTCCAAGAAGGCTATGACTGACATGGATAGCACCAACCTGTATGCGTACATCTCA 836
consensus_8615#2 ---------------------ACTGACATGGATAGCACCGACCTGTATGCGTACATCTCA 706
consensus_8615#0 GTTTATTCCAAGAAGGTTATGACTGACATGGATAGCACCAACCTGTATGCGTACATCTCA 795
consensus_8615#3 ------------------------------------------------------------
consensus_8615#1 ATAATTGCTCTCCTTGTCTGCATCCCTCCTGCAATTATTATTGAAGGACCTCAACTAGTG 896
consensus_8615#2 ATAATTGCTCTCCTTGTCTGCATCCCTCCTGCGATTATTATTGAAGGACCTCAACTAGTG 766
consensus_8615#0 ATAATTGCTCTCCTTGTCTGCATCCCTCCTGCAATTATTATTGAAGGACCTCAACTAGTG 855
consensus_8615#3 ------------------------------------------------------------
consensus_8615#1 CAGCATGGATTCAAAGATGCTATTGCTAAAGTTGGATTAGCAAAGTTGGTTTCTAATCTC 956
consensus_8615#2 CAGCATGGATTCGAAGATGCTATTGCTAAAGTTGGATTAGCAAAGTTGGTTTCTAATCTC 826
consensus_8615#0 CAGCATGGATTCAAAGATGCTATTGCTAAAGTTGGATTAGCAAAGTTGGTTTCTAATCTC 915
consensus_8615#3 ------------------------------------------------------------
consensus_8615#1 CTTGTGGTGGGCTTGTTCTATCACCTTTATAACCAGGTTGCTACAAACACATTAGAAAGG 1016
consensus_8615#2 CTTGTGGTGGGCTTGTTCTATCACCTTTATAACCAGGTTGCTACAAACACATTAGAAAGG 886
consensus_8615#0 CTTGTGGTGGGCTTGTTCTATCACCTTTATAACCAGGTTGCTACAAACACATTAGAAAGG 975
consensus_8615#3 ------------------------------------------------------------
consensus_8615#1 GTGACCCCTCTAACACATGCTGTTGG-CAATGTGTTAAAAC-GTGTCTTCGTCATTGGCT 1074
consensus_8615#2 GTGACCCCTCTAACACATGCTGTTGG-CAATGTGTTAAAAC-GTGTCTTCGTCATTGGCT 944
consensus_8615#0 GTGACCCCTCTAACACATGCTGTTGG-CAATGTGTTAAAAC-GTGTCTTCGTCATTGGCT 1033
consensus_8615#3 -TGACCCCTCTAACACATGCTGTTGGGCNATGTGTTAAAACCGTGTCTTCGTCATTGGCT 59
************************* * ************ ******************
consensus_8615#1 TCTCAATCA-TTGCA-TTCGGCAACA-AGATCACC---ACACAAACAGGAATTGGCACTT 1128
consensus_8615#2 TCTCAATCA-TTGCA-TTCGGCAACA-AGATCACC---ACACAAACAGGAATTGGCACTT 998
consensus_8615#0 TCTCAATCA-TTGCA-TTCGGCAACA-AGATCACC---ACACAAACAGGAATTGGCACTT 1087
consensus_8615#3 TCTCNATCACTTGCACTTCGGCNACCCAGATCACCCACACCCAACCCGGAATTGGCANCT 119
**** **** ***** ****** ** ******** ** *** * ********** *
consensus_8615#1 G--CATTGCCATAGC-TGGTGTTGCACTCTATTCTTATATCAAGGCTAAGATTGAAGAAG 1185
consensus_8615#2 G--CATTGCCATAGC-TGGTGTTGCACTCTATTCTTATATCAAGGCTAAGATTGAAGAAG 1055
consensus_8615#0 G--CATTGCCATAGC-TGGTGTTGCACTCTATTCTTATATCAAGGCTAAGATTGAAGAAG 1144
consensus_8615#3 TGCCCTTGCCATAGCCTGGTGTTGCNCTCTATTCTTATATCCAGGCTAAGATTGAAGAAG 179
* ********** ********* *************** ******************
consensus_8615#1 AGAAAACGCAAATGAAGAGCGCATAAGGAGTTGAATCTGTGGATATAGTTGGGTAGCTGC 1245
consensus_8615#2 AGAAAACGCAAATGAAGAGCGCATAAGGAGTTGAATCTGTGGATATAGTTGGGTAGCTGC 1115
consensus_8615#0 AGAAAACGCAAATGAAGAGCGCATAAGGAGTTGAATCTGTGGATATAGTTGGGTAGCTGC 1204
consensus_8615#3 AGAAAACCCCAATGAAGAGCGCATAAGGAGTTGAATCTGTGGATATAGTTGGGTA-CTGC 238
******* * ********************************************* ****
consensus_8615#1 TTTGATCGATCTGTATTGCCTCCGAGAAATA-AAATGAGCTGTAAGATTTATA-ACAATC 1303
consensus_8615#2 TTTGATCGATCTGTATTGCCTCCGAGAAATA-AAATGAGCTGTAAGATTTATA-ACAATC 1173
consensus_8615#0 TTTGATCGATCTGTATTGCCTCCGAGAAATA-AAATGAGCTGTAAGATTTATA-ACAATC 1262
consensus_8615#3 TTTGATCGATCTGTATTGCCTCCGAGAAATATAAATGAGCTGTAAGATTTATACACCATC 298
******************************* ********************* ** ***
consensus_8615#1 TAGGTGCCTGCTGTATCTCATCTTGTTTGTTATTGTCGATTTCGCTTTGAACAGCAAAAG 1363
consensus_8615#2 TAGGTGCCTGCTGTATCTCATCTTGTTTGTTATTGTCGATTTCGCTTTGAACAGCAAAAG 1233
consensus_8615#0 TAGGTGCCTGCTGTATCTCATCTTGTTTGTTATTGTCGATTTCGCTTTGAACAGCAAAAG 1322
consensus_8615#3 TAGGNGCCTGCTGTATCTCATCTTGTTTGTTATTGTCGATTTCGCTTTGACCAGCCAAAG 358
**** ********************************************* **** ****
consensus_8615#1 CTACCGATGCATTTTTTTTTTTTT--GTAAATTATAACTG-CTAAAAACCCGCAGAAACA 1420
consensus_8615#2 CTACCGATGCATTTTTTTTTTTTTT-GTAAATTATAACTG-CTAAAAACCCGCAGAAACA 1291
consensus_8615#0 CTACCGATGCATTTTTTTTTTTTT--GTAAATTATAACTG-CTAAAAACCCGCAGAAACA 1379
consensus_8615#3 CTACCGATCCCNTTTTTTTTTGTTGTGTAAATTATAACTGGCTAAAGACCCCAGGAAACC 418
******** * ********* ** ************** ***** **** *****
consensus_8615#1 -AAGCCTCCATCATCCCATTTTCCCC---------------------------------- 1445
consensus_8615#2 -AAGCCTCCATCATCCCATTTTCCCCTTCCTTGGCTGAAAAAAAGGA------------- 1337
consensus_8615#0 -AAGCCTCCATCATCCCATTTTCCCCTTCCTTGGCTATTTGGACTTTTGATGATGCTCTT 1438
consensus_8615#3 CAANCCTCCATGCATCCA------------------------------------------ 436
** ******* ***
consensus_8615#1 ----------
consensus_8615#2 ----------
consensus_8615#0 AAGTTTGAGC 1448
consensus_8615#3 ----------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||