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Oryza sativa
cluster # 862 cluster # 862       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_862#0 length = 1665 sequences # 2  

consensusID : consensus_862#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1665
fasta sequence
                              [CACCCACAGCCTCTCCCCCCTCTCTGACGGCGCCGCCGCACGACACGACAACCAACCGAAGCCAGCCTCTCCCGCCGCCTTCGCCGCCGCCACCGTCGCCGCCGGACAGCAGTATAAATGGAAGTTGGTGCCAGCTCTATAATGGAGGATGCCAACGGAGTAGTCGATTTGGATGTTGACATTGTTGGCCTAGAAAGTGGTGCTGCTTGCAGCAAATTTGTCAAAACTGAAGATCCTGATGCTACAGAGTGTTCAAGTTCTTTTGGGGACACTCTGTCAGGGTCAGAAGATGATGCAAGGCCTTCAGAGATTAGTGACATTGAGGTCGACTCACCTTTCTGCCGCTATCCTGCTAATGGTGATGCTGCTGCTCTCATGGATGCAGCTGTTTCCGACAATTTGGATAGATTATTAAAGAAGAAACGGGTAACTGATCACTGGCGAAAGTATATCAGCCCATTAATGTGGAGATGCCAATGGTTGGAGCTACGTATGAAGGATTTGCAATCTCAAGTATCGAGATATGACAGACAACTTGCAGTACTAAAACATGAGAAGGAGTTGCAGACAAAAATGATTGAGTTGGATTGCTCCTCATCGAGATCAGTACCCTTCTCTTCTCATTGCTGCAGGAAGACTATGAAGAGGAGGAGGAGAAAGAGAAACGAGGAGAAAATGAATGCTTCATCGTACATCTCAAATCACACTGTATTCTCTTATTATGAGAAAACGGAAGCAGATGCCTTTTCTATTGATGACGATGAGGACACAGATGAAAACACCACAGTTAACAATGAAACTGATTGGCTACTTGGAATTAAGAGAGGTGAAGCTACTGTCGAGCAGATTCTTTTGAGCATTCAATCTGCTCAAGATAAAGTGCTTAGCCTGAGATCTAGTCTCAAGAAGGCAATGGCCAAAAAGAGTAAGGGAGCAATCCTTAAAGTCAACACACACATGAACGGTGCACAGAGCTCAAGTTGCTCACCAGGAAAGGGTAAAGTGCTTGAAAGATCACCAAGGGACATGTCGGATTGTGATATGGATGATGCCGCCATGCCCGAGAGTGCTCTTTCAAGTTATGGAGAAGCTAATGATATGGATATTTTTGAAAGCACCATGAGCTTATTGTCGGCTGAAGTTCCACATCAGATGGGAGAATTTCACCAGAGTTCTGAAGATGTATTGATTGACAATCAAGCAGCTGAGGAAGGGTATCAGAACTTTGAGGTGATCAGCCATCCATGCAAGCGCCTAAGGGTATCGGTCAAGAGAGAAAGCGGGGCGCACTCCGAGGATGAGAGTGTTGCCCCCACAGTCTCTGTGAAGAAAGAAGCTCAGGAAGAAGCCACAACCAGCTTCGGTCTCCAGGCAGCGTTTTTTAAGCCCGGCTACACAGGCAAGCGGAGAAGGAGGATGCCTAAAATTCAAAGACGAGGCGGTTCATCCGCCTCTCCTTTTTCGTCTTGGATTTCCTCTCGTATTCGTAAAAAGCGGCAATTCTAAGGGGGGACTAGCTACCTCAGACAATCGATCTTCCAGTTTAGCTTCTGATCTGAACTTTTAGTTAGATGAGATGATGACGGCAACTGCAGTTCTTTTCCCTTTCTCTTTGTACCTGATATATTAACGATGACATATGAGCAATCTGGAAATGTGGCACGA]

[+] EMBL AK101228             [CACCCACAGCCTCTCCCCCCTCTCTGACGGCGCCGCCGCACGACACGACAACCAACCGAAGCCAGCCTCTCCCGCCGCCTTCGCCGCCGCCACCGTCGCCGCCGGACAGCAGTATAAATGGAAGTTGGTGCCAGCTCTATAATGGAGGATGCCAACGGAGTAGTCGATTTGGATGTTGACATTGTTGGCCTAGAAAGTGGTGCTGCTTGCAGCAAATTTGTCAAAACTGAAGATCCTGATGCTACAGAGTGTTCAAGTTCTTTTGGGGACACTCTGTCAGGGTCAGAAGATGATGCAAGGCCTTCAGAGATTAGTGACATTGAGGTCGACTCACCTTTCTGCCGCTATCCTGCTAATGGTGATGCTGCTGCTCTCATGGATGCAGCTGTTTCCGACAATTTGGATAGATTATTAAAGAAGAAACGGGTAACTGATCACTGGCGAAAGTATATCAGCCCATTAATGTGGAGATGCCAATGGTTGGAGCTACGTATGAAGGATTTGCAATCTCAAGTATCGAGATATGACAGACAACTTGCAGTACTAAAACATGAGAAGGAGTTGCAGACAAAAATGATTGAGTTGGATTGCTCCTCATCGAGATCAGTACCCTTCTCTTCTCATTGCTGCAGGAAGACTATGAAGAGGAGGAGGAGAAAGAGAAACGAGGAGAAAATGAATGCTTCATCGTACATCTCAAATCACACTGTATTCTCTTATTATGAGAAAACGGAAGCAGATGCCTTTTCTATTGATGACGATGAGGACACAGATGAAAACACCACAGTTAACAATGAAACTGATTGGCTACTTGGAATTAAGAGAGGTGAAGCTACTGTCGAGCAGATTCTTTTGAGCATTCAATCTGCTCAAGATAAAGTGCTTAGCCTGAGATCTAGTCTCAAGAAGGCAATGGCCAAAAAGAGTAAGGGAGCAATCCTTAAAGTCAACACACACATGAACGGTGCACAGAGCTCAAGTTGCTCACCAGGAAAGGGTAAAGTGCTTGAAAGATCACCAAGGGACATGTCGGATTGTGATATGGATGATGCCGCCATGCCCGAGAGTGCTCTTTCAAGTTATGGAGAAGCTAATGATATGGATATTTTTGAAAGCACCATGAGCTTATTGTCGGCTGAAGTTCCACATCAGATGGGAGAATTTCACCAGAGTTCTGAAGATGTATTGATTGACAATCAAGCAGCTGAGGAAGGGTATCAGAACTTTGAGGTGATCAGCCATCCATGCAAGCGCCTAAGGGTATCGGTCAAGAGAGAAAGCGGGGCGCACTCCGAGGATGAGAGTGTTGCCCCCACAGTCTCTGTGAAGAAAGAAGCTCAGGAAGAAGCCACAACCAGCTTCGGTCTCCAGGCAGCGTTTTTTAAGCCCGGCTACACAGGCAAGCGGAGAAGGAGGATGCCTAAAATTCAAAGACGAGGCGGTTCATCCGCCTCTCCTTTTTCGTCTTGGATTTCCTCTCGTATTCGTAAAAAGCGGCAATTCTAAGGGGGGACTAGCTACCTCAGACAATCGATCTTCCAGTTTAGCTTCTGATCTGAACTTTTAGTTAGATGAGATGATGACGGCAACTGCAGTTCTTTTCCCTTTCTCTTTGTACCTGATATATTAACGATGACATATGAGCAATCTGGAAATGTGGCACGA]
[+] EMBL AK059530             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             aaaTCTTTTGAGCATTCAATCTGCTCAAGATAAAGTGCTTAGCCTGAGATCTAGTCTCAAGAAGGCAATGGCCAAAAAGAGTAAGGGAGCAATCCTTAAAGTCAACACACACATGAACGGTGCACAGAGCTCAAGTTGCTCACCAGGAAAGGGTAAAGTGCTTGAAAGATCACCAAGGGACATGTCGGATTGTGATATGGATGATGCCGCCATGCCCGAGAGTGCTCTTTCAAGTTATGGAGAAGCTAATGATATGGATATTTTTGAAAGCACCATGAGCTTATTGTCGGCTGAAGTTCCACATCAGATGGGAGAATTTCACCAGAGTTCTGAAGATGTATTGATTGACAATCAAGCAGCTGAGGAAGGGTATCAGAACTTTGAGGTGATCAGCCATCCATGCAAGCGCCTAAGGGTATCGGTCAAGAGAGAAAGCGGGGCGCACTCCGAGGATGAGAGTGTTGCCCCCACAGTCTCTGTGAAGAAAGAAGCTCAGGAAGAAGCCACAACCAGCTTCGGTCTCCAGGCAGCGTTTTTTAAGCCCGGCTACACAGGCAAGCGGAGAAGGAGGATGCCTAAAATTCAAAGACGAGGCGGTTCATCCGCCTCTCCTTTTTCGTCTTGGATTTCCTCTCGTATTCGTAAAAAGCGGCAATTCTAAGGGGGGACTAGCTACCTCAGACAATCGATCTTCCAGTTTAGCTTCTGATCTGAACTTTTAGTTAGATGAGATGATGACGGCAACTGCAGTTCTTTTCCCTTTCTCTTTGTACCTGATATATTAACGATGACATATGAGCAATCTGGAAATGTGGCACGA]


>consensus_862#0 CACCCACAGCCTCTCCCCCCTCTCTGACGGCGCCGCCGCACGACACGACAACCAACCGAA GCCAGCCTCTCCCGCCGCCTTCGCCGCCGCCACCGTCGCCGCCGGACAGCAGTATAAATG GAAGTTGGTGCCAGCTCTATAATGGAGGATGCCAACGGAGTAGTCGATTTGGATGTTGAC ATTGTTGGCCTAGAAAGTGGTGCTGCTTGCAGCAAATTTGTCAAAACTGAAGATCCTGAT GCTACAGAGTGTTCAAGTTCTTTTGGGGACACTCTGTCAGGGTCAGAAGATGATGCAAGG CCTTCAGAGATTAGTGACATTGAGGTCGACTCACCTTTCTGCCGCTATCCTGCTAATGGT GATGCTGCTGCTCTCATGGATGCAGCTGTTTCCGACAATTTGGATAGATTATTAAAGAAG AAACGGGTAACTGATCACTGGCGAAAGTATATCAGCCCATTAATGTGGAGATGCCAATGG TTGGAGCTACGTATGAAGGATTTGCAATCTCAAGTATCGAGATATGACAGACAACTTGCA GTACTAAAACATGAGAAGGAGTTGCAGACAAAAATGATTGAGTTGGATTGCTCCTCATCG AGATCAGTACCCTTCTCTTCTCATTGCTGCAGGAAGACTATGAAGAGGAGGAGGAGAAAG AGAAACGAGGAGAAAATGAATGCTTCATCGTACATCTCAAATCACACTGTATTCTCTTAT TATGAGAAAACGGAAGCAGATGCCTTTTCTATTGATGACGATGAGGACACAGATGAAAAC ACCACAGTTAACAATGAAACTGATTGGCTACTTGGAATTAAGAGAGGTGAAGCTACTGTC GAGCAGATTCTTTTGAGCATTCAATCTGCTCAAGATAAAGTGCTTAGCCTGAGATCTAGT CTCAAGAAGGCAATGGCCAAAAAGAGTAAGGGAGCAATCCTTAAAGTCAACACACACATG AACGGTGCACAGAGCTCAAGTTGCTCACCAGGAAAGGGTAAAGTGCTTGAAAGATCACCA AGGGACATGTCGGATTGTGATATGGATGATGCCGCCATGCCCGAGAGTGCTCTTTCAAGT TATGGAGAAGCTAATGATATGGATATTTTTGAAAGCACCATGAGCTTATTGTCGGCTGAA GTTCCACATCAGATGGGAGAATTTCACCAGAGTTCTGAAGATGTATTGATTGACAATCAA GCAGCTGAGGAAGGGTATCAGAACTTTGAGGTGATCAGCCATCCATGCAAGCGCCTAAGG GTATCGGTCAAGAGAGAAAGCGGGGCGCACTCCGAGGATGAGAGTGTTGCCCCCACAGTC TCTGTGAAGAAAGAAGCTCAGGAAGAAGCCACAACCAGCTTCGGTCTCCAGGCAGCGTTT TTTAAGCCCGGCTACACAGGCAAGCGGAGAAGGAGGATGCCTAAAATTCAAAGACGAGGC GGTTCATCCGCCTCTCCTTTTTCGTCTTGGATTTCCTCTCGTATTCGTAAAAAGCGGCAA TTCTAAGGGGGGACTAGCTACCTCAGACAATCGATCTTCCAGTTTAGCTTCTGATCTGAA CTTTTAGTTAGATGAGATGATGACGGCAACTGCAGTTCTTTTCCCTTTCTCTTTGTACCT GATATATTAACGATGACATATGAGCAATCTGGAAATGTGGCACGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)