These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8632#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1327 fasta sequence [TTTTTTTTTCATCCATACGCACACTATGATTTTATTTTTCAAAACTATGTAAAAATTACATATAAATTATATTGTAATTACATATAAGTTACAATATAACTAAACTATATTTGCATTTGATAAATATTTAGGAGAAAATCGGATATATTGCAAAACCATTTATTCGTGTGTTTTGGTTTGTGATTCGTCGGGTGCAGCCTGATGTCACCGCTCCCGGCGTGAACATCCTGGCGGCGTGGCCACCCATGTCGTCGCCGACGGTGATCCCGCTGGACAAGCGCTCCGTGACGTGGAACTTCGACTCGGGCACGTCCATGTCGTGCCCGCACGTCTCCGGCATCGTCGCCGTCGTCAGGGCCGTGCACCCGACGTGGTCGCCGGCAGCCATCAAGTCGGCGCTGATGACCACGGCATACATGTACGACGACACGTCCGACGTGATGCTGGCCGGCGGGACGCTGAAGGCGGCGGACGCGTTCGACGTCGGCGCCGGCCACGTCGACCCGCTGCGCGCGCTGGACCCGGGCCTCGTCTACGACGCCGGCGTGCGCGACCACGTCCTCTTCCTCTGCGGCCTCGGCTACACCAGGTACCAGATACGCCAGATGGTGCTCCCC-TCGCCGTCGCTCGACACGAGCTGCGGCGGCGAGGGCGGCGGCGCGGCGCCGCCGGAGTACGACCTCAACTACCCGGCCATCGTGCTCCCGCGGCTCAACGCGACGGTGACCGTGAAGCGGACGGTGACGAACATGGGGCCCCGGAGGGACGCCGTGTACCGCGCCGCCGTCGTCAGCCCGCACGGCGCGCGCGCCGCCGTGTGGCCGCCGGCGCTGTCCTTCTCCCCGTACCGCGACACGGCCTCCTACTACGTGACCGTCGCGCCGGCGAAGCTGTCGCGCGGCCGGTACGACTTCGGCGAGATCGTCTGGTCCGACGGCTACCACCGCGTCCGCACGCCGCTCGTCGTCAGGGTCACCACCATGCCCGACACCGA-CACCGGCGTCGACGTCGACGTCGCCGCCGCGCGCGCCATGGACACGGCTACTGCCACCCAGCTGCAGGATTCCTAGCTCAGCTTGTTCAGAAACCTGGTTTCATCTGGTCATCAAATCATCAGACTACAAAAATTGAGATCTTTTTGGGTGTGGATTTCTCGAGCTTGGAGTTAAAATTTCTTCGGACAAGTAGCCACTAGGTGTCAGTGTGTCACTGGTCAAGTACTACTAAATGAGCAAATTTCTGGATGCTACTATTACTGTCATTTCTATGGCGGCTAATGATGCAAGAATTATTTATATGTATGATGATGTGAGTAATTAAAAATTTG] [-] EMBL AU172547 [TTTTTTTTTCATCCATACGCACACTATGATTTTATTTTTCAAAACTATGTAAAAATTACATATAAATTATATTGTAATTACATATAAGTTACAATATAACTAAACTATATTTGCATTTGATAAATATTTAGGAGAAAATCGGATATATTGCAAAACCATTTATTCGTGTGTTTTGGTTTGTGATTCGTCGGGTGCAGCCTGATGTCACCGCTCCCGGCGTGAACATCCTGGCGGCGTGGCCACCCATGTCGTCGCCGACGGTGATCCCGCTGGACAAGCGCTCCGTGACGTGGAACTTCGACTCGGGCACGTCCATGTCGTGCCCGCACGTCTCCGGCATCGTCGCCGTCGTCAGGGCCGTGCACCCGACGTGGTCGCCGGCAGCCATCAAGTCGGCGCTGATGACCACGGCATACATGTACGACGACACGTCCGACGTGAT ] [-] EMBL AK108516 [ ATCCATACGCACACTATGATTTTATTTTTCAAAACTATGTAAAAATTACATATAAATTATATTGTAATTACATATAAGTTACAATATAACTAAACTATATTTGCATTTGATAAATATTTAGGAGAAAATCGGATATATTGCAAAACCATTTATTCGTGTGTTTTGGTTTGTGATTCGTCGGGTGCAGCCTGATGTCACCGCTCCCGGCGTGAACATCCTGGCGGCGTGGCCACCCATGTCGTCGCCGACGGTGATCCCGCTGGACAAGCGCTCCGTGACGTGGAACTTCGACTCGGGCACGTCCATGTCGTGCCCGCACGTCTCCGGCATCGTCGCCGTCGTCAGGGCCGTGCACCCGACGTGGTCGCCGGCAGCCATCAAGTCGGCGCTGATGACCACGGCATACATGTACGACGACACGTCCGACGTGATGCTGGCCGGCGGGACGCTGAAGGCGGCGGACGCGTTCGACGTCGGCGCCGGCCACGTCGACCCGCTGCGCGCGCTGGACCCGGGCCTCGTCTACGACGCCGGCGTGCGCGACCACGTCCTCTTCCTCTGCGGCCTCGGCTACACCAGGTACCAGATACGCCAGATGGTGCTCCCC TCGCCGTCGCTCGACACGAGCTGCGGCGGCGAGGGCGGCGGCGCGGCGCCGCCGGAGTACGACCTCAACTACCCGGCCATCGTGCTCCCGCGGCTCAACGCGACGGTGACCGTGAAGCGGACGGTGACGAACATGGGGCCCCGGAGGGACGCCGTGTACCGCGCCGCCGTCGTCAGCCCGCACGGCGCGCGCGCCGCCGTGTGGCCGCCGGCGCTGTCCTTCTCCCCGTACCGCGACACGGCCTCCTACTACGTGACCGTCGCGCCGGCGAAGCTGTCGCGCGGCCGGTACGACTTCGGCGAGATCGTCTGGTCCGACGGCTACCACCGCGTCCGCACGCCGCTCGTCGTCAGGGTCACCACCATGCCCGACACCGA CACCGGCGTCGACGTCGACGTCGCCGCCGCGCGCGCCATGGACACGGCTACTGCCACCCAGCTGCAGGATTCCTA ] [+] EMBL AK071242 [ GCAGCCTGATGTCACCGCTCCCGGCGTGAACATCCTGGCGGCGTGGCCACCCATGTCGTCGCCGACGGTGATCCCGCTGGACAAGCGCTCCGTGACGTGGAACTTCGACTCGGGCACGTCCATGTCGTGCCCGCACGTCTCCGGCATCGTCGCCGTCGTCAGGGCCGTGCACCCGACGTGGTCGCCGGCAGCCATCAAGTCGGCGCTGATGACCACGGCATACATGTACGACGACACGTCCGACGTGATGCTGGCCGGCGGGACGCTGAAGGCGGCGGACGCGTTCGACGTCGGCGCCGGCCACGTCGACCCGCTGCGCGCGCTGGACCCGGGCCTCGTCTACGACGCCGGCGTGCGCGACCACGTCCTCTTCCTCTGCGGCCTCGGCTACACCAGGTACCAGATACGCCAGATGGTGCTCCCC TCGCCGTCGCTCGACACGAGCTGCGGCGGCGAGGGCGGCGGCGCGGCGCCGCCGGAGTACGACCTCAACTACCCGGCCATCGTGCTCCCGCGGCTCAACGCGACGGTGACCGTGAAGCGGACGGTGACGAACATGGGGCCCCGGAGGGACGCCGTGTACCGCGCCGCCGTCGTCAGCCCGCACGGCGCGCGCGCCGCCGTGTGGCCGCCGGCGCTGTCCTTCTCCCCGTACCGCGACACGGCCTCCTACTACGTGACCGTCGCGCCGGCGAAGCTGTCGCGCGGCCGGTACGACTTCGGCGAGATCGTCTGGTCCGACGGCTACCACCGCGTCCGCACGCCGCTCGTCGTCAGGGTCACCACCATGCCCGACACCGA CACCGGCGTCGACGTCGACGTCGCCGCCGCGCGCGCCATGGACACGGCTACTGCCACCCAGCTGCAGGATTCCTAGCTCAGCTTGTTCAGAAACCTGGTTTCATCTGGTCATCAAATCATCAGACTACAAAAATTGAGATCTTTTTGGGTGTGGATTTCTCGAGCTTGGAGTTAAAATTTCTTCGGACAAGTAGCCACTAGGTGTCAGTGTGTCACTGGTCAAGTACTACTAAATGAGCAAATTTCTGGATGCTACTATTACTGTCATTTCTATGGCGGCTAATGATGCAAGAATTATTTATATGTATGATGATGTGAGTAATTAAAAATTTG] [-] EMBL CA758770 [ ATGGTGCTCCCCTTGGCCGTCGCTCGACACGAGTGGCGGCGGCGAGGGCGGCGGCGCGGCGCCGCCGGAGTACGACCTCAACTACCCGGCCATCGTGCTCCCGGGGCTCAACGCGACGGTGACCGTGAAGCGGACGGTGACGAACATGGGGCCCCGGAGGGACGCCGTGTACCGCGCCGCCGTCGTCAGCCCGCACGGCGCGCGCGCCGCCGTGTGGCCGCCGGCGCTGGCCTTCTCCCCGTACCGCGACACGGCCTCCTTCTACGTGACCGTCGCGCCGGCGAAGCTGTCGCGCGGCCGGTACGACTTCGGCGAGATCGTCTGGTCCGACGGCTACCACCGCGTCCGCACGCCGCTCGTCGTCAGGGTCACCACCATGCCATACACCGA CACCGGCGTCGACGTTGACGTCGCCGCCGCGCGCACCATGGACACGGCTACTGCCACCCAGCTGCAGGATTCCTAGCTCAGCTTGTTCAGAAACCTGGTTTCATCTGGTCATCAAATCATCAGACTACAAAAATTGAGATCTTTTTGGGTGTGGATTTCTCGAGCTNGGAGTTAAAATTTCTTCGGACAAGTAGCCA ] [-] EMBL C72916 [ tttACGAACATGGGG CCCGGAGGAACGCCGTGTACCGCGCCGCCGTCGTNAGCCCGCAC GCGCGCGCGCCGCCGTGTGGCCGCCGGCGCTGTCCTTCTCCCCGTACCGCGACACGGCCTCCTACTACGTGACCGTCGCGCCGGCGAAACTGTCGCGCGGCCGGTACGACTTCGGCGAGATCGTCTGGTCCGACGGCTACCACCGCGTCCGCACGCCGCTCGTCGTCAGGGTCACCACCATGCCCGACACCGACCANCCGCGTCGACGTCGACGTCGCCGCCGCGCGCGCCATGGACACGGCTACTGCCACCCAGCTGCAGGATTCCTAGCTCAGCTTGTTCAGAAACCTGGTT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||