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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8635#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2446 fasta sequence
[CTCCGGGCTTCTGGTAGAGTACGATTTGATACTATCTGCGATTCCGCCTCCCCTCCCCCTCGCCGCCGCCGCCGCCGCGGGGAAATCTGGGCGAGACTCCACTACTACCGCACGTGTCGTAATGGCTCGGAACAAGAAGAAGGTAGCCGTGGCGGCGCCCAAAGCCCGGAAGCCGAAGCGTGATGCAGAGGAGAAGAAGTTCGCGAAGAAGGCCGACATGACGGAGTTCCGGGCGCAGCTGGACTCGCTGGGGTTGAAGATTATCGAAGTTAGTGCGGATGGCAACTGCTTCTTTAGTCTGCAGGGCAATGGGCGACCAGCTCGAAGGCAACGAGGAAGAGCACATGAAGTACCGTGCAATGATTGTGCAATACATTAAGGAGCACCGTGTGGATTTTGAGCCATTCATTGAGGACGAGGAACCGTTTGAGAAATATTGTGACTCTATGCTTGAGGATGGGACTTGGGCTGGTCATATGGAGTTGCAAGCAGCTTCTATTCTCAAGAGAAAAAACATATGCATCCACATGCTTAACTCACCACGATGGTACATAAGAAACTTTTCTGATCGTGAAGCTACCAGTATGATTCATTTATCGTATCATCAGGGTGAGCACTACAATAGTGTCAGACTGAGGGAAGATCCATGTCAAGGTCCTGCAATGCCAGTTATTATCAAGGCAGATGCCAATGTAGCTAGCACAAGCAATAATGCTCAAACAAAAGCAAAGGACCTGAAGAAATCTTCAGACAGATCAAAGTATGATCATATATCGGTTAAATTGGTGATGGCTGGAACTGGATGTTCTAATATCGCTGCAGTTGAACAGGTTTTGAAAGACATGGATGGTGACATTGATGCTGCTATAGAGTACATGTTAGCTGAGCAACTAATACTGGGTTCTGATGGTGCGGATGGAGATCCTTATCTGGACTATGCATGTGATGAGTATGTACAGACCATAGAGGATGAGCTTAGCATGAAGCAGGATGAGAGTCAACTGGATGAACACGAGAAAGAAGAAAAGGACTGTTCTAGCAAAGGCGAAACAGCTCAGAAACACAACAGTTCACATTCTAAAAAGGGAAAGTCAAAAACCAAGGAATGCTCTTGTGGATCTGCTAGGAAGCACAAGCCTTCTTGTAATTTAGCCACAACTGTAGCATCGAGAGAACCTCCAAAAACAACTGCACCATCGAGAGAACCTCCAAAGTATGGCTTTATAATGGTTTTGCTAAAAATATGGCGCCACATTTTTGACTTGATTTCAGTCATTTTTTTCCCATTCGGATTGCTACCATTCTTTTATACTCCTATGTAAGTATGTTTCGCTCTACTATCTCCTCTTTCAAGTAGGTAATTAATTGTTTTCATCCTAATTCTCTTATATAGTGTGTGCTGCAAAAAATATGGTGTAAGTATTGAGATTTGGTTTTAATTTTTTTTTGTTTTTTGGTGGAAAATGTGGTGTCTTAAATATAGCTAATCCCCTTTATAATGTTTCTGTCCTTTTGTTTGTCTTTTACCATATTCTATTCTACAACTGAACTTATGTCCTGCTGTTCGCATTGTAAGCATTCTTTCAAATGGAATTTTTGGGGGGTGAAATCAATATTTCCAGCGTATTTGCATAGTGCATTGCTGCTGTTGTATCTGGCCTATGAAACCTTAACAGTATTGCTGCAAAATATGCACTTATCCCATATGCCTTAAAGTCACCGACCTGATTACTATTTCCTTTTTCACTAGGGAGGTTAGTTGCATTGCATGTTTAACACAATGCTGGAAGTGTTATGTACTAATACTATCTGCTTAATGTGCTTTACTATCAGGACCAAAGGTGGCCAAGGGAAAGGCCAGAAGGGGAAGAAGCAAAAGAAGAAAGAACAAGATGAAACACCAGCCATCCGGGATCACGATTCTAAAGTTGCACCAGATCTAGGAGCTCTTTGCATATGAACATGGTCGACGAGGGTGATGTTCTCCTCAGTGTGTAGCCGCCAGGAATGTGCGGGGCATCAGTTTTGAAGAGAGATGTCTGCGGTCTACCTTGCTTGGACGCCATGATCTAGATGGTGATTTTTCTCTTGCCCAGTTGACGGCTTCACGTCACTGCCTTCTGCTGACTGACTGTTGTTAAGCCTGTCCAAGTTTCAGGATGGGATCATGGGACTGACGGTGAGGTGGTGATCTCAGTGGGCACAGAAACATGAATGAGCTGTTGATACATAGCTTCTTTTCTTCATACATACTTTACCTGTGGATCAATGCCATGTAAAACAATGATCAGTCGTGCAAAGCATATTAATTTTGTGAGAATTATATCATAATAGAGTATTCCCTGTCCTAACAAAACAAAAATACGCTCTATTGTTTGAGATGGAGGGATAGTATAATGGGTTCATCCTGGAGTGTATATAGCCAGGGAGTCACAATTGCCTTCAT]
[+] EMBL AK103099 [CTCCGGGCTTCTGGTAGAGTACGATTTGATACTATCTGCGATTCCGCCTCCCCTCCCCCTCGCCGCCGCCGCCGCCGCGGGGAAATCTGGGCGAGACTCCACTACTACCGCACGTGTCGTAATGGCTCGGAACAAGAAGAAGGTAGCCGTGGCGGCGCCCAAAGCCCGGAAGCCGAAGCGTGATGCAGAGGAGAAGAAGTTCGCGAAGAAGGCCGACATGACGGAGTTCCGGGCGCAGCTGGACTCGCTGGGGTTGAAGATTATCGAAGTTAGTGCGGATGGCAACTGCTTCTTTAGTCTGCAGGGCAATGGGCGACCAGCTCGAAGGCAACGAGGAAGAGCACATGAAGTACCGTGCAATGATTGTGCAATACATTAAGGAGCACCGTGTGGATTTTGAGCCATTCATTGAGGACGAGGAACCGTTTGAGAAATATTGTGACTCTATGCTTGAGGATGGGACTTGGGCTGGTCATATGGAGTTGCAAGCAGCTTCTATTCTCAAGAGAAAAAACATATGCATCCACATGCTTAACTCACCACGATGGTACATAAGAAACTTTTCTGATCGTGAAGCTACCAGTATGATTCATTTATCGTATCATCAGGGTGAGCACTACAATAGTGTCAGACTGAGGGAAGATCCATGTCAAGGTCCTGCAATGCCAGTTATTATCAAGGCAGATGCCAATGTAGCTAGCACAAGCAATAATGCTCAAACAAAAGCAAAGGACCTGAAGAAATCTTCAGACAGATCAAAGTATGATCATATATCGGTTAAATTGGTGATGGCTGGAACTGGATGTTCTAATATCGCTGCAGTTGAACAGGTTTTGAAAGACATGGATGGTGACATTGATGCTGCTATAGAGTACATGTTAGCTGAGCAACTAATACTGGGTTCTGATGGTGCGGATGGAGATCCTTATCTGGACTATGCATGTGATGAGTATGTACAGACCATAGAGGATGAGCTTAGCATGAAGCAGGATGAGAGTCAACTGGATGAACACGAGAAAGAAGAAAAGGACTGTTCTAGCAAAGGCGAAACAGCTCAGAAACACAACAGTTCACATTCTAAAAAGGGAAAGTCAAAAACCAAGGAATGCTCTTGTGGATCTGCTAGGAAGCACAAGCCTTCTTGTAATTTAGCCACAACTGTAGCATCGAGAGAACCTCCAAAAACAACTGCACCATCGAGAGAACCTCCAAAGTATGGCTTTATAATGGTTTTGCTAAAAATATGGCGCCACATTTTTGACTTGATTTCAGTCATTTTTTTCCCATTCGGATTGCTACCATTCTTTTATACTCCTATGTAAGTATGTTTCGCTCTACTATCTCCTCTTTCAAGTAGGTAATTAATTGTTTTCATCCTAATTCTCTTATATAGTGTGTGCTGCAAAAAATATGGTGTAAGTATTGAGATTTGGTTTTAATTTTTTTTTGTTTTTTGGTGGAAAATGTGGTGTCTTAAATATAGCTAATCCCCTTTATAATGTTTCTGTCCTTTTGTTTGTCTTTTACCATATTCTATTCTACAACTGAACTTATGTCCTGCTGTTCGCATTGTAAGCATTCTTTCAAATGGAATTTTTGGGGGGTGAAATCAATATTTCCAGCGTATTTGCATAGTGCATTGCTGCTGTTGTATCTGGCCTATGAAACCTTAACAGTATTGCTGCAAAATATGCACTTATCCCATATGCCTTAAAGTCACCGACCTGATTACTATTTCCTTTTTCACTAGGGAGGTTAGTTGCATTGCATGTTTAACACAATGCTGGAAGTGTTATGTACTAATACTATCTGCTTAATGTGCTTTACTATCAGGACCAAAGGTGGCCAAGGGAAAGGCCAGAAGGGGAAGAAGCAAAAGAAGAAAGAACAAGATGAAACACCAGCCATCCGGGATCACGATTCTAAAGTTGCACCAGATCTAGGAGCTCTTTGCATATGAACATGGTCGACGAGGGTGATGTTCTCCTCAGTGTGTAGCCGCCAGGAATGTGCGGGGCATCAGTTTTGAAGAGGGATGTCTGCGGTCTACCTTGCTTGGACGCCATGATCTAGATGGTGATTTTTCTCTTGCCCAGTTGACGGCTTCACGTCACTGCCTTCTGCTGACTGACTGTTGTTAAGCCTGTCCAAGTTTCAGGATGGGATCATGGGACTGACGGTGAGGTGGTGATCTCAGTGGGCACAGAAACATGAATGAGCTGTTGATACATAGCTTCTTTTCTTCATACATACTTTACCTGTGGATCAATGCCATGTAAAACAATGATCAGTCGTGCAAAGCATATTAATTTTGTGAGAATTATATCATAATAGAGTAT ]
[-] EMBL CB644474 [ CTTAACAGTATTGCTGCAAAATATGCACTTATCCCATATGCCTTAAAGTCACCGACCTGATTACTATTTCCTTTTTCACTAGGGAGGTTAGTTGCATTGCATGTTTAACACAATGCTGGAAGTGTTATGTACTAATACTATCTGCTTAATGTGCTTTACTATCAGGACCAAAGGTGGCCAAGGGAAAGGCCAGAAGGGGAAGAAGCAAAAGAAGAAAGAACAAGATGAAACACCAGCCATCCGGGATCACGATTCTAAAGTTGCACCAGATCTAGGAGCTCTTTGCATATGAACATGGTCGACGAGGGTGATGTTCTCCTCAGTGTGTAGCCGCCAGGAATGTGCGGGGCATCAGTTTTGAAGAGAGATGTCTGCGGTCTACCTTGCTTGGACGCCATGATCTAGATGGTGATTTTTCTCTTGCCCAGTTGACGGCTTCACGTCACTGCCTTCTGCTGACTGACTGTTGTTAAGCCTGTCCAAGTTTCAGGATGGGATCATGGGACTGACGGTGAGGTGGTGATCTCAGTGGGCACAGAAACATGAATGAGCTGTTGATACATAGCTTCTTTTCTTCATACATACTTTACCTGTGGATCAATGCCATGTAAAACAATGATCAGTCGTGCAAAGCATATTAATTTTGTGAGAATTATATCATAATAGAGTATTCCCTGTCCTAACAAAACAAAAATACGCTCTATTGTTTGAGATGGAGGGATAGTATAATGGGTTCATCCTGGAGTGTATATAGCCAGGGAGTCACAATTGCCTTCAT]
[+] EMBL AA750559 [ AAACACCAGCCATCCGGGATCACGATTCTAAAGTTGCACCAGATCTAGGAGCTCTTTGCATATGAACATGGTCGACGAGGGTGATGTTCTCCTCAGTGTGTAGCCGCCAGGAATGTGCGGGGCATCAGTTTTGAAGAGAGATGTCTGCGGTCTACCTTGCTTGGACGCCATGATCTAGATGGTGATTTTTCTCTTGCCCAGTTGACGGCTTCACGTCACTGCCT ]
consensusID : consensus_8635#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2089 fasta sequence
[TTTGATACTATCTGCGATTCCGCCTCCCCTCCCCCTCGCCGCCGCCGCCGCCGCGGGGAAATCTAGGCGAGACTCCACTACTACCGCACGTGTCGTAATGGCTCGGAACAAGAAGAAGGTAGCCGTGGCGGCGCCCAAAGCCCGGAAGCCGAAGCGTGATGCAGAGGAGAAGAAGTTCGCGAAGAAGGCCGACATGACGGAGTTCCGGGCGCAGCTGGACTCGCTGGGGTTGAAGATTATCGAAGTTAGTGCGGATGGCAACTGCTTCTTTAGGGCAATGGGCGACCAGCTCGAAGGCAACGAGGAAGAGCACATGAAGTACCGTGCAATGATTGTGCAATACATTAAGGAGCACCGTGTGGATTTTGAGCCATTCATTGAGGACGAGGAACCGTTTGAGAAATATTGTGACTCTATGCTTGAGGATGGGACTTGGGCTGGTCATATGGAGTTGCAAGCAGCTTCTATTCTCAAGAGAAAAAACATATGCATCCACATGCTTAACTCACCACGATGGTACATAAGAAACTTTTCTGATCGTGAAGCTACCAGTATGATTCATTTATCGTATCATCAGGGTGAGCACTACAATAGTGTCAGACTGAGGGAAGATCCATGTCAAGGTCCTGCAATGCCAGTTATTATCAAGGCAGATGCCAATGTAGCTAGCACAAGCAATAATGCTCAAACAAAAGCAAAGGCGAAACAGCTCAGAAACACAACAGTTCACATTCTAAAAAGGGAAAGTCAAAAACCAAGGAATGCTCTTGTGGATCTGCTAGGAAGCACAAGCCTTCTTGTAATTTAGCCACAACTGTAGCATCGAGAGAACCTCCAAAAACAACTGCACCATCGAGAGAACCTCCAAAGTATGGCTTTATAATGGTTTTGCTAAAAATATGGCGCCACATTTTTGACTTGATTTCAGTCATTTTTTTCCCATTCGGATTGCTACCATTCTTTTATACTCCTATGTAAGTATGTTTCGCTCTACTATCTCCTCTTTCAAGTAGGTAATTAATTGTTTTCATCCTAATTCTCTTATATAGTGTGTGCTGCAAAAAATATGGTGTAAGTATTGAGATTTGGTTTTAATTTTTTTTGTTTTTTGGTGGAAAATGTGGTGTCTTAAATATAGCTAATCCCCTTTATAATGTTTCTGTCCTTTTGTTTGTCTTTTACCATATTCTATTCTACAACTGAACTTATGTCCTGCTGTTCGCATTGTAAGCATTCTTTCAAATGGAATTTTTGGGGGGTGAAATCAATATTTCCAGCGTATTTGCATAGTGCATTGCTGCTGTTGTATCTGGCCTATGAAACCTTAACAGTATTGCTGCAAAATATGCACTTATCCCATATGCCTTAAAGTCACCGACCTGATTACTATTTCCTTTTTCACTAGGGAGGTTAGTTGCATTGCATGTTTAACACAATGCTGGAAGTGTTATGTACTAATACTATCTGCTTAATGTGCTTTACTATCAGGACCAAAGGTGGCCAAGGGAAAGGCCAGAAGGGGAAGAAGCAAAAGAAGAAAGAACAAGATGAAACACCAGCCATCCGGAATCACGATTCTAAAGTTGCACCAGATCTAGGAGCTCTTTGCATATGAACATGGTCGACGAGGGTGATGTTCTCCTCAGTGTGTAGCCGCCAGGAATGTGCGGGGCATCAGTTTTGAAGAGAGATGTCTGCGGTCTACCTTGCTTGGACGCCATGATCTAGATGGTGATTTTTCTCTTGCCCAGTTGACGGCTTCACGTCACTGCCTTCTGCTGACTGACTGTTGTTAAGCCTGTCCAAGTTTCAGGATGGGATCATGGGACTGACGGTGAGGTGGTGATCTCAGTGGGCACAGAAACATGAATGAGCTGTTGATACATAGCTTCTTTTCTTCATACATACTTTACCTGTGGATCAATGCCATGTAAAACAATGATCAGTCGTGCAAAGCATATTAATTTTGTGAGAATTATATCATAATAGAGTATTCCCTGTCCTAACAAAACAAAAATACGCTCTATTGTTTGAGATGGAGGGATAGTATAATGGGTTCATCCTGGAGTATATATAGCCAGTCAGTCAC]
[+] EMBL AK064003 [TTTGATACTATCTGCGATTCCGCCTCCCCTCCCCCTCGCCGCCGCCGCCGCCGCGGGGAAATCTAGGCGAGACTCCACTACTACCGCACGTGTCGTAATGGCTCGGAACAAGAAGAAGGTAGCCGTGGCGGCGCCCAAAGCCCGGAAGCCGAAGCGTGATGCAGAGGAGAAGAAGTTCGCGAAGAAGGCCGACATGACGGAGTTCCGGGCGCAGCTGGACTCGCTGGGGTTGAAGATTATCGAAGTTAGTGCGGATGGCAACTGCTTCTTTAGGGCAATGGGCGACCAGCTCGAAGGCAACGAGGAAGAGCACATGAAGTACCGTGCAATGATTGTGCAATACATTAAGGAGCACCGTGTGGATTTTGAGCCATTCATTGAGGACGAGGAACCGTTTGAGAAATATTGTGACTCTATGCTTGAGGATGGGACTTGGGCTGGTCATATGGAGTTGCAAGCAGCTTCTATTCTCAAGAGAAAAAACATATGCATCCACATGCTTAACTCACCACGATGGTACATAAGAAACTTTTCTGATCGTGAAGCTACCAGTATGATTCATTTATCGTATCATCAGGGTGAGCACTACAATAGTGTCAGACTGAGGGAAGATCCATGTCAAGGTCCTGCAATGCCAGTTATTATCAAGGCAGATGCCAATGTAGCTAGCACAAGCAATAATGCTCAAACAAAAGCAAAGGCGAAACAGCTCAGAAACACAACAGTTCACATTCTAAAAAGGGAAAGTCAAAAACCAAGGAATGCTCTTGTGGATCTGCTAGGAAGCACAAGCCTTCTTGTAATTTAGCCACAACTGTAGCATCGAGAGAACCTCCAAAAACAACTGCACCATCGAGAGAACCTCCAAAGTATGGCTTTATAATGGTTTTGCTAAAAATATGGCGCCACATTTTTGACTTGATTTCAGTCATTTTTTTCCCATTCGGATTGCTACCATTCTTTTATACTCCTATGTAAGTATGTTTCGCTCTACTATCTCCTCTTTCAAGTAGGTAATTAATTGTTTTCATCCTAATTCTCTTATATAGTGTGTGCTGCAAAAAATATGGTGTAAGTATTGAGATTTGGTTTTAATTTTTTTTGTTTTTTGGTGGAAAATGTGGTGTCTTAAATATAGCTAATCCCCTTTATAATGTTTCTGTCCTTTTGTTTGTCTTTTACCATATTCTATTCTACAACTGAACTTATGTCCTGCTGTTCGCATTGTAAGCATTCTTTCAAATGGAATTTTTGGGGGGTGAAATCAATATTTCCAGCGTATTTGCATAGTGCATTGCTGCTGTTGTATCTGGCCTATGAAACCTTAACAGTATTGCTGCAAAATATGCACTTATCCCATATGCCTTAAAGTCACCGACCTGATTACTATTTCCTTTTTCACTAGGGAGGTTAGTTGCATTGCATGTTTAACACAATGCTGGAAGTGTTATGTACTAATACTATCTGCTTAATGTGCTTTACTATCAGGACCAAAGGTGGCCAAGGGAAAGGCCAGAAGGGGAAGAAGCAAAAGAAGAAAGAACAAGATGAAACACCAGCCATCCGGAATCACGATTCTAAAGTTGCACCAGATCTAGGAGCTCTTTGCATATGAACATGGTCGACGAGGGTGATGTTCTCCTCAGTGTGTAGCCGCCAGGAATGTGCGGGGCATCAGTTTTGAAGAGAGATGTCTGCGGTCTACCTTGCTTGGACGCCATGATCTAGATGGTGATTTTTCTCTTGCCCAGTTGACGGCTTCACGTCACTGCCTTCTGCTGACTGACTGTTGTTAAGCCTGTCCAAGTTTCAGGATGGGATCATGGGACTGACGGTGAGGTGGTGATCTCAGTGGGCACAGAAACATGAATGAGCTGTTGATACATAGCTTCTTTTCTTCATACATACTTTACCTGTGGATCAATGCCATGTAAAACAATGATCAGTCGTGCAAAGCATATTAATTTTGTGAGAATTATATCATAATAGAGTATTCCCTGTCCTAACAAAACAAAAATACGCTCTATTGTTTGAGATGGAGGGATAGTATAATGGGTTCATCCTGGAGTATATATAGCCAGTCAGTCAC]
consensusID : consensus_8635#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 803 fasta sequence
[GCCGCCGCCGCCGCCGCGGGGAAATCTAGGCGAGACTCCACTACTACCGCACGTGTCGTAATGGCTCGGAACAAGAAGAAGGTAGCCGTGGCGGCGCCCAAAGCCCGGAAGCCGAAGCGTGATGCAGAGGAGAAGAAGTTCGCGAAGAAGGCCGACATGACGGAGTTCCGGGCGCAGCTGGACTCGCTGGGGTTGAAGATTATCGAAGGCAATGGGCGACCAGCTCGAAGGCAACGAGGAAGAGCACATGAAGTACCGTGCAATGATTGTGCAATACATTAAGGAGCACCGTGTGGATTTTGAGCCATTCATTGAGGACGAGGAACCGTTTGAGAAATATTGTGACTCTATGCTTGAGGATGGGACTTGGGCTGGTCATATGGAGTTGCAAGCAGCTTCTATTCTCAAGAGAAAAAACATATGCATCCACATGCTTAACTCACCACGATGGTACATAAGAAACTTTTCTGATCGTGAAGCTACCAGTATGATTCATTTATCGTATCATCAGGGTGAGCACTACAATAGTGTCAGACTGAGGGAAGATCCATGTCAAGGTCCTGCAATGCCAGTTATTATCAAGGCAGATGCCAATGTAGCTAGCACAAGCAATAATGCTCAAACAAAAGCAAAGGACCTGAAGAAATCTTCAGACAGATCAAAGTATGATCATATATCGGTTAAATTGGTGATGGCTGGAACTGGATGTTCTAATATCGCTGCAGTTGAACAGGTTTTGAAAGACATGGATGGTGACATTGATGCTGCTATAGAGTACATGTTAGCTGAGCAACTAATACTGG]
[+] EMBL CB645575 [GCCGCCGCCGCCGCCGCGGGGAAATCTAGGCGAGACTCCACTACTACCGCACGTGTCGTAATGGCTCGGAACAAGAAGAAGGTAGCCGTGGCGGCGCCCAAAGCCCGGAAGCCGAAGCGTGATGCAGAGGAGAAGAAGTTCGCGAAGAAGGCCGACATGACGGAGTTCCGGGCGCAGCTGGACTCGCTGGGGTTGAAGATTATCGAAGGCAATGGGCGACCAGCTCGAAGGCAACGAGGAAGAGCACATGAAGTACCGTGCAATGATTGTGCAATACATTAAGGAGCACCGTGTGGATTTTGAGCCATTCATTGAGGACGAGGAACCGTTTGAGAAATATTGTGACTCTATGCTTGAGGATGGGACTTGGGCTGGTCATATGGAGTTGCAAGCAGCTTCTATTCTCAAGAGAAAAAACATATGCATCCACATGCTTAACTCACCACGATGGTACATAAGAAACTTTTCTGATCGTGAAGCTACCAGTATGATTCATTTATCGTATCATCAGGGTGAGCACTACAATAGTGTCAGACTGAGGGAAGATCCATGTCAAGGTCCTGCAATGCCAGTTATTATCAAGGCAGATGCCAATGTAGCTAGCACAAGCAATAATGCTCAAACAAAAGCAAAGGACCTGAAGAAATCTTCAGACAGATCAAAGTATGATCATATATCGGTTAAATTGGTGATGGCTGGAACTGGATGTTCTAATATCGCTGCAGTTGAACAGGTTTTGAAAGACATGGATGGTGACATTGATGCTGCTATAGAGTACATGTTAGCTGAGCAACTAATACTGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8635#0 CTCCGGGCTTCTGGTAGAGTACGATTTGATACTATCTGCGATTCCGCCTCCCCTCCCCCT 60
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 ------------------------TTTGATACTATCTGCGATTCCGCCTCCCCTCCCCCT 36
consensus_8635#0 CGCCGCCGCCGCCGCCGCGGGGAAATCTGGGCGAGACTCCACTACTACCGCACGTGTCGT 120
consensus_8635#2 -GCCGCCGCCGCCGCCGCGGGGAAATCTAGGCGAGACTCCACTACTACCGCACGTGTCGT 59
consensus_8635#1 CGCCGCCGCCGCCGCCGCGGGGAAATCTAGGCGAGACTCCACTACTACCGCACGTGTCGT 96
*************************** *******************************
consensus_8635#0 AATGGCTCGGAACAAGAAGAAGGTAGCCGTGGCGGCGCCCAAAGCCCGGAAGCCGAAGCG 180
consensus_8635#2 AATGGCTCGGAACAAGAAGAAGGTAGCCGTGGCGGCGCCCAAAGCCCGGAAGCCGAAGCG 119
consensus_8635#1 AATGGCTCGGAACAAGAAGAAGGTAGCCGTGGCGGCGCCCAAAGCCCGGAAGCCGAAGCG 156
************************************************************
consensus_8635#0 TGATGCAGAGGAGAAGAAGTTCGCGAAGAAGGCCGACATGACGGAGTTCCGGGCGCAGCT 240
consensus_8635#2 TGATGCAGAGGAGAAGAAGTTCGCGAAGAAGGCCGACATGACGGAGTTCCGGGCGCAGCT 179
consensus_8635#1 TGATGCAGAGGAGAAGAAGTTCGCGAAGAAGGCCGACATGACGGAGTTCCGGGCGCAGCT 216
************************************************************
consensus_8635#0 GGACTCGCTGGGGTTGAAGATTATCGAAGTTAGTGCGGATGGCAACTGCTTCTTTAGTCT 300
consensus_8635#2 GGACTCGCTGGGGTTGAAGATTATCGAAG------------------------------- 208
consensus_8635#1 GGACTCGCTGGGGTTGAAGATTATCGAAGTTAGTGCGGATGGCAACTGCTTCTTTAGG-- 274
*****************************
consensus_8635#0 GCAGGGCAATGGGCGACCAGCTCGAAGGCAACGAGGAAGAGCACATGAAGTACCGTGCAA 360
consensus_8635#2 -----GCAATGGGCGACCAGCTCGAAGGCAACGAGGAAGAGCACATGAAGTACCGTGCAA 263
consensus_8635#1 -----GCAATGGGCGACCAGCTCGAAGGCAACGAGGAAGAGCACATGAAGTACCGTGCAA 329
*******************************************************
consensus_8635#0 TGATTGTGCAATACATTAAGGAGCACCGTGTGGATTTTGAGCCATTCATTGAGGACGAGG 420
consensus_8635#2 TGATTGTGCAATACATTAAGGAGCACCGTGTGGATTTTGAGCCATTCATTGAGGACGAGG 323
consensus_8635#1 TGATTGTGCAATACATTAAGGAGCACCGTGTGGATTTTGAGCCATTCATTGAGGACGAGG 389
************************************************************
consensus_8635#0 AACCGTTTGAGAAATATTGTGACTCTATGCTTGAGGATGGGACTTGGGCTGGTCATATGG 480
consensus_8635#2 AACCGTTTGAGAAATATTGTGACTCTATGCTTGAGGATGGGACTTGGGCTGGTCATATGG 383
consensus_8635#1 AACCGTTTGAGAAATATTGTGACTCTATGCTTGAGGATGGGACTTGGGCTGGTCATATGG 449
************************************************************
consensus_8635#0 AGTTGCAAGCAGCTTCTATTCTCAAGAGAAAAAACATATGCATCCACATGCTTAACTCAC 540
consensus_8635#2 AGTTGCAAGCAGCTTCTATTCTCAAGAGAAAAAACATATGCATCCACATGCTTAACTCAC 443
consensus_8635#1 AGTTGCAAGCAGCTTCTATTCTCAAGAGAAAAAACATATGCATCCACATGCTTAACTCAC 509
************************************************************
consensus_8635#0 CACGATGGTACATAAGAAACTTTTCTGATCGTGAAGCTACCAGTATGATTCATTTATCGT 600
consensus_8635#2 CACGATGGTACATAAGAAACTTTTCTGATCGTGAAGCTACCAGTATGATTCATTTATCGT 503
consensus_8635#1 CACGATGGTACATAAGAAACTTTTCTGATCGTGAAGCTACCAGTATGATTCATTTATCGT 569
************************************************************
consensus_8635#0 ATCATCAGGGTGAGCACTACAATAGTGTCAGACTGAGGGAAGATCCATGTCAAGGTCCTG 660
consensus_8635#2 ATCATCAGGGTGAGCACTACAATAGTGTCAGACTGAGGGAAGATCCATGTCAAGGTCCTG 563
consensus_8635#1 ATCATCAGGGTGAGCACTACAATAGTGTCAGACTGAGGGAAGATCCATGTCAAGGTCCTG 629
************************************************************
consensus_8635#0 CAATGCCAGTTATTATCAAGGCAGATGCCAATGTAGCTAGCACAAGCAATAATGCTCAAA 720
consensus_8635#2 CAATGCCAGTTATTATCAAGGCAGATGCCAATGTAGCTAGCACAAGCAATAATGCTCAAA 623
consensus_8635#1 CAATGCCAGTTATTATCAAGGCAGATGCCAATGTAGCTAGCACAAGCAATAATGCTCAAA 689
************************************************************
consensus_8635#0 CAAAAGCAAAGG------ACCTGAAGAAATCTTCAG---ACAGATCAAAGTATGA---TC 768
consensus_8635#2 CAAAAGCAAAGG------ACCTGAAGAAATCTTCAG---ACAGATCAAAGTATGA---TC 671
consensus_8635#1 CAAAAGCAAAGGCGAAACAGCTCAGAAACACAACAGTTCACATTCTAAAAAGGGAAAGTC 749
************ * ** * ** * *** *** *** ** **
consensus_8635#0 ATATATCGGTTAAATTGGTGATGGCTGGAACTGGATGTTCTAATATCGCTGCAGTTGAAC 828
consensus_8635#2 ATATATCGGTTAAATTGGTGATGGCTGGAACTGGATGTTCTAATATCGCTGCAGTTGAAC 731
consensus_8635#1 AAAAACCAAGGAATGCTCTTGTGGATCTGCTAGGAAGCACAAGCCTTCTTGTAATTTAGC 809
* * * * ** * *** * *** * * * * ** * ** * *
consensus_8635#0 AGGTTTTGAAAGACATGGATGGT----GACATTGATGCTGCTATAGAGTACATGTTAGCT 884
consensus_8635#2 AGGTTTTGAAAGACATGGATGGT----GACATTGATGCTGCTATAGAGTACATGTTAGCT 787
consensus_8635#1 CACAACTGTAGCATCGAGAGAACCTCCAAAAACAACTGCACCATCGAGAGAACCTCCAAA 869
** * * ** * * * * ** *** * *
consensus_8635#0 GAGCAACTA-ATACTGGGTTCTGATGGTGCGGATGGAGATCCTTATCTGGACTATGCATG 943
consensus_8635#2 GAGCAACTA-ATACTGG------------------------------------------- 803
consensus_8635#1 GTATGGCTTTATAATGGTTTTGCTAAAAATATGGCGCCACATTTTTGACTTGATTTCAGT 929
* ** *** ***
consensus_8635#0 TGATGAGTATGTACAGACCATAGAGGATGAGCTTAGCATGAAGCAGGATGAGAGTCAACT 1003
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 CATTTTTTTCCCATTCGGATTGCTACCATTCTTTTATACTCCTATGTAAGTATGTTTCGC 989
consensus_8635#0 GGATGAACACGAGAAAGAAGAAAAGGACTGTTCTAGCAAAGGCGAAACAGCTCAGAAACA 1063
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 TCTACTATCTCCTCTTTCAAGTAGGTAATTAATTGTTTTCATCCTAATTCTCTTATATAG 1049
consensus_8635#0 CAACAGTTCACATTCTAAAAAGGGAAAGTCAAAAACCAAGGAATGCTCTTGTGGATCTGC 1123
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 TGTGTGCTGCAAAAAATATGGTGTAAGTATTGAGATTTGGTTTTAATTTTTTTTGTTTTT 1109
consensus_8635#0 TAGGAAGCACAAGCCTTCTTGTAATTTAGCCACAACTGTAGCATCGAGAGAACCTCCAAA 1183
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 TGGTGGAAAATGTGGTGTCTTAAATATAGCTAATCCCCTTTATAATGTTTCTGTCCTTTT 1169
consensus_8635#0 AACAACTGCACCATCGAGAGAACCTCCAAAGTATGGCTTTATAATGGTTTTGCTAAAAAT 1243
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 GTTTGTCTTTTACCATATTCTATTCTACAACTGAACTTATGTCCTGCTGTTCGCATTGTA 1229
consensus_8635#0 ATGGCGCCACATTTTTGACTTGATTTCAGTCATTTTTTTCCCATTCGGATTGCTACCATT 1303
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 AGCATTCTTTCAAATGGAATTTTTGGGGGGTGAAATCAATATTTCCAGCGTATTTGCATA 1289
consensus_8635#0 CTTTTATACTCCTATGTAAGTATGTTTCGCTCTACTATCTCCTCTTTCAAGTAGGTAATT 1363
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 GTGCATTGCTGCTGTTGTATCTGGCCTATGAAACCTTAACAGTATTGCTGCAAAATATGC 1349
consensus_8635#0 AATTGTTTTCATCCTAATTCTCTTATATAGTGTGTGCTGCAAAAAATATGGTGTAAGTAT 1423
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 ACTTATCCCATATGCCTTAAAGTCACCGACCTGATTACTATTTCCTTTTTCACTAGGGAG 1409
consensus_8635#0 TGAGATTTGGTTTTAATTTTTTTTTGTTTTTTGGTGGAAAATGTGGTGTCTTAAATATAG 1483
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 GTTAGTTGCATTGCATGTTTAACACAATGCTGGAAGTGTTATGTACTAATACTATCTGCT 1469
consensus_8635#0 CTAATCCCCTTTATAATGTTTCTGTCCTTTTGTTTGTCTTTTACCATATTCTATTCTACA 1543
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 TAATGTGCTTTACTATCAGGACCAAAGGTGGCCAAGGGAAAGGCCAGAAGGGGAAGAAGC 1529
consensus_8635#0 ACTGAACTTATGTCCTGCTGTTCGCATTGTAAGCATTCTTTCAAATGGAATTTTTGGGGG 1603
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 AAAAGAAGAAAGAACAAGATGAAACACCAGCCATCCGGAATCACGATTCTAAAGTTGCAC 1589
consensus_8635#0 GTGAAATCAATATTTCCAGCGTATTTGCATAGTGCATTGCTGCTGTTGTATCTGGCCTAT 1663
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 CAGATCTAGGAGCTCTTTGCATATGAACATGGTCGACGAGGGTGATGTTCTCCTCAGTGT 1649
consensus_8635#0 GAAACCTTAACAGTATTGCTGCAAAATATGCACTTATCCCATATGCCTTAAAGTCACCGA 1723
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 GTAGCCGCCAGGAATGTGCGGGGCATCAGTTTTGAAGAGAGATGTCTGCGGTCTACCTTG 1709
consensus_8635#0 CCTGATTACTATTTCCTTTTTCACTAGGGAGGTTAGTTGCATTGCATGTTTAACACAATG 1783
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 CTTGGACGCCATGATCTAGATGGTGATTTTTCTCTTGCCCAGTTGACGGCTTCACGTCAC 1769
consensus_8635#0 CTGGAAGTGTTATGTACTAATACTATCTGCTTAATGTGCTTTACTATCAGGACCAAAGGT 1843
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 TGCCTTCTGCTGACTGACTGTTGTTAAGCCTGTCCAAGTTTCAGGATGGGATCATGGGAC 1829
consensus_8635#0 GGCCAAGGGAAAGGCCAGAAGGGGAAGAAGCAAAAGAAGAAAGAACAAGATGAAACACCA 1903
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 TGACGGTGAGGTGGTGATCTCAGTGGGCACAGAAACATGAATGAGCTGTTGATACATAGC 1889
consensus_8635#0 GCCATCCGGGATCACGATTCTAAAGTTGCACCAGATCTAGGAGCTCTTTGCATATGAACA 1963
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 TTCTTTTCTTCATACATACTTTACCTGTGGATCAATGCCATGTAAAACAATGATCAGTCG 1949
consensus_8635#0 TGGTCGACGAGGGTGATGTTCTCCTCAGTGTGTAGCCGCCAGGAATGTGCGGGGCATCAG 2023
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 TGCAAAGCATATTAATTTTGTGAGAATTATATCATAATAGAGTATTCCCTGTCCTAACAA 2009
consensus_8635#0 TTTTGAAGAGAGATGTCTGCGGTCTACCTTGCTTGGACGCCATGATCTAGATGGTGATTT 2083
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 AACAAAAATACGCTCTATTGTTTGAGATGGAGGGATAGTATAATGGGTTCATCCTGGAGT 2069
consensus_8635#0 TTCTCTTGCCCAGTTGACGGCTTCACGTCACTGCCTTCTGCTGACTGACTGTTGTTAAGC 2143
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 ATATATAGCCAGTCAGTCAC---------------------------------------- 2089
consensus_8635#0 CTGTCCAAGTTTCAGGATGGGATCATGGGACTGACGGTGAGGTGGTGATCTCAGTGGGCA 2203
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 ------------------------------------------------------------
consensus_8635#0 CAGAAACATGAATGAGCTGTTGATACATAGCTTCTTTTCTTCATACATACTTTACCTGTG 2263
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 ------------------------------------------------------------
consensus_8635#0 GATCAATGCCATGTAAAACAATGATCAGTCGTGCAAAGCATATTAATTTTGTGAGAATTA 2323
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 ------------------------------------------------------------
consensus_8635#0 TATCATAATAGAGTATTCCCTGTCCTAACAAAACAAAAATACGCTCTATTGTTTGAGATG 2383
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 ------------------------------------------------------------
consensus_8635#0 GAGGGATAGTATAATGGGTTCATCCTGGAGTGTATATAGCCAGGGAGTCACAATTGCCTT 2443
consensus_8635#2 ------------------------------------------------------------
consensus_8635#1 ------------------------------------------------------------
consensus_8635#0 CAT 2446
consensus_8635#2 ---
consensus_8635#1 ---
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||