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Oryza sativa
cluster # 8640 cluster # 8640       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8640#0 length = 1074 sequences # 5  
consensusID : consensus_8640#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1074
fasta sequence 
                              [ATAAACCCGGCGCCGACGACGACGCCACAATGATGGCCGGCCGGCGAAGCGCCCACGTCGACGCCGCCGTCATCGCCGCCGCCGCCCTCCTCCTCCTCGCCGCGACGGCGGCGGA-GGGCGCCGTGTCCAGCTGGGAGTCCAACTCCGACGAGGACTACCACATCTTCGTGGACAACCGCATGTCGGACAACATGCACCTGAGCTGCTACGCCGTGCAGGGCGGCGGCCGGAGCGAGTTCTACCACAGCTTCCGCGCCGACCCCGGGAGGGAGGTGCAGCTGCCGTACCTGCAGCCGGCGCCCAACGCCCGCCTCGTCTGCAAGTGGGCGTGCGCGGGGAACTACCTGAAGGGCGTCACCCTCTTCAGCTCGTCGTGGCGGGAGGCCACCTCCGGCGAGTGCCGCCGCCGCGGCGGCGGC-TGCAACATGGTGTTCGACTGGCACGAGATGTTCGTCGACGGCCGC-TCGGGCGGCGGCGGGAGGAGGCTGC-TCGGCGACCTGCCGCAGC-ACGAGTGCCAGAAGATGCTGCTGGTGTTCAACCGCCGCTG-CTGGTTCAAGTCGCACCGCCACCCCTACGTCGGCCGCGCCATGAACGGCCTCACCGACTACCTCATGGC-GTAGCACCCATGCATGCACACA-CAATTACTCCCTCCGTTTCATATCAAACTAGCCATCTTAATTTTGATCAAATTT-ATGAAAAAACATAG-CAACATTTTTCATAT-CAAAATATATTTACGGTTAGATTT-AACAAAACTAATTTGAT-GTTTTAGATGTTGCTATTGTTTTCTATAAACTCAATAAAAAATTTTAAAAAATTAATTAGGAAAAAGATCAAGCATCTTATATAATATGAAACGGAGGGAGTAACTAATACGTATACGTGTATTCTTACACATGTACGTACGTATATATGGCAGCGGACGGTTTCGATGATGTGTATGTATGTTGATTGATTCCTGTCAAATTAATTTCTAGAGGATTAAGCCTTAGAAGGTGATCACGGTCGATGTACTTTGAATTTTGACGAATTAATTAATTTAAATTGTAAAGGTGGTGAAATTTTTTGAAAAAAAAA]

[+] EMBL AK106991             [ATAAACCCGGCGCCGACGACGACGCCACAATGATGGCCGGCCGGCGAAGCGCCCACGTCGACGCCGCCGTCATCGCCGCCGCCGCCCTCCTCCTCCTCGCCGCGACGGCGGCGGA GGGCGCCGTGTCCAGCTGGGAGTCCAACTCCGACGAGGACTACCACATCTTCGTGGACAACCGCATGTCGGACAACATGCACCTGAGCTGCTACGCCGTGCAGGGCGGCGGCCGGAGCGAGTTCTACCACAGCTTCCGCGCCGACCCCGGGAGGGAGGTGCAGCTGCCGTACCTGCAGCCGGCGCCCAACGCCCGCCTCGTCTGCAAGTGGGCGTGCGCGGGGAACTACCTGAAGGGCGTCACCCTCTTCAGCTCGTCGTGGCGGGAGGCCACCTCCGGCGAGTGCCGCCGCCGCGGCGGCGGC TGCAACATGGTGTTCGACTGGCACGAGATGTTCGTCGACGGCCGC TCGGGCGGCGGCGGGAGGAGGCTGC TCGGCGACCTGCCGCAGC ACGAGTGCCAGAAGATGCTGCTGGTGTTCAACCGCCGCTG CTGGTTCAAGTCGCACCGCCACCCCTACGTCGGCCGCGCCATGAACGGCCTCACCGACTACCTCATGGC GTAGCACCCATGCATGCACACA CAATTACTCCCTCCGTTTCATATCAAACTAGCCATCTTAATTTTGATCAAATTT ATGAAAAAACATAG CAACATTTTTCATAT CAAAATATATTTACGGTTAGATTT AACAAAACTAATTTGAT GTTTTAGATGTTGCTATTGTTTTCTATAAACTCAATAAAAAATTTTAAAAAATTAATTAGGAAAAAGATCAAGCATCTTATATAATATGAAACGGAGGGAGTAACTAATACGTATACGTGTATTCTTACACATGTACGTACGTATATATGGCAGCGGACGGTTTCGATGATGTGTATGTATGTTGATTGATTCCTGTCAAATTAATTTCTAGAGGATTAAGCCTTAGAAGGTGATCACGGTCGATGTACTTTGAATTTTGACGAATTAATTAATTTAAATTGTAAAGGTGGTG                   ]
[+] EMBL AU075648             [ggAAACCCGGCGCCGACGACGACGCCACAATGATGGCCGGCCGGCGAA CGCCCACGTCGACGCCGCCGTCATCGCCGCCGCCGCCCTCCTCCTCCTCGCCGCGACGGCGGCGGA GGGCGCCGTGTCCAGCTGGGAGTCCAACTCCGACGAGGACTACCACATCTTCGTGGACAACCGCATGTCGGACAACATGCACCTGAGCTGCTACGCCGTGCAGGGCGGCGGCCGGAGCGAGTTCTACCACAGCTTCCGCGCCGACCCCGGGAGGGAGGTGCAGCTGCCGTACCTGCAGCCGGCGCCCAACGCCCGCCTCGTCTGCAAGTGGGCGTGCGCGGGGAACTACCTGAAGGGCGTCACCCTCTTCAGCTCGTCGTGGCGGGAGGCCACCTCCGGCGAGTGCCGCCGCCGCGGCGGCGGCTTGCAACATGGTGTTCGACGGGCACGAGATGTTCGTCGACGGCCGCTTCGGGCGGCGGCGGGAGGAGGCTGCTTCGGCGAACTGCCGCAGCAACGAGTGCCAGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL C71692               [                     ACGCCACAATNATGGCCGGCCGGCGAAG GCCCACGTCGACGCCGCCGTCATCGCCGCCGCCGCCCTCCTCCTCCTCGCCGCGACGG GGGGNANGGGCGCCGTGTCCAGCTGGGAGTCCAACTCCNACGAGGACTACCACATCTTCNTGGACAACCGCATGTNGGACAACATGCACCTNAGCTGCTACGCCGTGCAGGGCGGCGGCCGGAGCGAGTTCTACCACAGCTTCCGCGCCGACCCCGGGAGGAGGGTGCAGCTGCCGTACCTGCAGCCGGCGCCCAACGCCCGCTTCGTCTGCAAGTGGGCGTNCGCGGGGAACTACCTGAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU075647             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  nACCTGCCGCAGN ACGAGTGCCAGAAGCTGNTGCTGGTGTTCAACCGCCGCTGCCTGGTTCAAGTCGCACCGCCACCCCTACGTCGGCCGCGCCATGAACGGCCTCACCGACTACCTCATGGC GTAGCACCCATGCATGCACACA CAATTACTCCCTCCGTTTCATATCAAACTAGCCATCTTAATTTTGATCAAATTT ATGAAAAAACATAG CAACATTTTTCATAT CAAAATATATTTACGGTTAGATTT AACAAAACTAATTTGAT GTTTTAGATGTTGCTATTGTTTTCTATAAACTCAATAAAAAATTTTAAAAAATTAATTAGGAAAAAGATCAAGCATCTTATATAATATGAAACGGAGGGAGTAACTAATACGTATACGTGTATTCTTACACATGTACGTACGTATATATGGCAGCGGACGGTTTCGATGATGTGTATGTATGTTGATTGATTCCTGTCAAATTAATTTCTAGAGGATTAAGCCTTAGAAGGTGATCACGGTCGATGTACTTTGAATTTTGACGAATTAATTAATTTAAATTGTAAAGGTGGTGAAATTTTTTGAAAAAAAAA]
[+] EMBL AU093741             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACTACCTCATGGCGGTAGCACCCATGCATGCACACACCAATTACTCCCTCCGTTTCATATCAAACTAGCCATCTTAATTTTGATCAAATTTCATGAAAAAACATAGCCAACATTTTTCATATCCAAAATATATTTACGGTTAGATTTCAACAAAACTAATTTGATCGTTTTAGATGTTGCTATTGTTTTCTATAAACTCAATAAAAAATTTTAAAAAATTAATTAGGAAAAAGATCAAGCATCTTATATAATATGAAACGGAGGGAGTAACTAATACGTATACGTGTATTCTTACACATGTACGTACGTATATATGGCAGCGGACGGTTTCGATGATGTGTATGTATGTTGATTGATTCCTGTCAAATTAATTTCTAGAGGATTAAGCCTTAGAAGGTGATCACGGTCGATGTACTTTGAATTTTGACGAATTAATTAATTTAAATTGTAAAGGTGGTGAAATTTTTTGAAA      ]




>consensus_8640#0
ATAAACCCGGCGCCGACGACGACGCCACAATGATGGCCGGCCGGCGAAGCGCCCACGTCG
ACGCCGCCGTCATCGCCGCCGCCGCCCTCCTCCTCCTCGCCGCGACGGCGGCGGAGGGCG
CCGTGTCCAGCTGGGAGTCCAACTCCGACGAGGACTACCACATCTTCGTGGACAACCGCA
TGTCGGACAACATGCACCTGAGCTGCTACGCCGTGCAGGGCGGCGGCCGGAGCGAGTTCT
ACCACAGCTTCCGCGCCGACCCCGGGAGGGAGGTGCAGCTGCCGTACCTGCAGCCGGCGC
CCAACGCCCGCCTCGTCTGCAAGTGGGCGTGCGCGGGGAACTACCTGAAGGGCGTCACCC
TCTTCAGCTCGTCGTGGCGGGAGGCCACCTCCGGCGAGTGCCGCCGCCGCGGCGGCGGCT
GCAACATGGTGTTCGACTGGCACGAGATGTTCGTCGACGGCCGCTCGGGCGGCGGCGGGA
GGAGGCTGCTCGGCGACCTGCCGCAGCACGAGTGCCAGAAGATGCTGCTGGTGTTCAACC
GCCGCTGCTGGTTCAAGTCGCACCGCCACCCCTACGTCGGCCGCGCCATGAACGGCCTCA
CCGACTACCTCATGGCGTAGCACCCATGCATGCACACACAATTACTCCCTCCGTTTCATA
TCAAACTAGCCATCTTAATTTTGATCAAATTTATGAAAAAACATAGCAACATTTTTCATA
TCAAAATATATTTACGGTTAGATTTAACAAAACTAATTTGATGTTTTAGATGTTGCTATT
GTTTTCTATAAACTCAATAAAAAATTTTAAAAAATTAATTAGGAAAAAGATCAAGCATCT
TATATAATATGAAACGGAGGGAGTAACTAATACGTATACGTGTATTCTTACACATGTACG
TACGTATATATGGCAGCGGACGGTTTCGATGATGTGTATGTATGTTGATTGATTCCTGTC
AAATTAATTTCTAGAGGATTAAGCCTTAGAAGGTGATCACGGTCGATGTACTTTGAATTT
TGACGAATTAATTAATTTAAATTGTAAAGGTGGTGAAATTTTTTGAAAAAAAAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)