These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8640#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1074 fasta sequence [ATAAACCCGGCGCCGACGACGACGCCACAATGATGGCCGGCCGGCGAAGCGCCCACGTCGACGCCGCCGTCATCGCCGCCGCCGCCCTCCTCCTCCTCGCCGCGACGGCGGCGGA-GGGCGCCGTGTCCAGCTGGGAGTCCAACTCCGACGAGGACTACCACATCTTCGTGGACAACCGCATGTCGGACAACATGCACCTGAGCTGCTACGCCGTGCAGGGCGGCGGCCGGAGCGAGTTCTACCACAGCTTCCGCGCCGACCCCGGGAGGGAGGTGCAGCTGCCGTACCTGCAGCCGGCGCCCAACGCCCGCCTCGTCTGCAAGTGGGCGTGCGCGGGGAACTACCTGAAGGGCGTCACCCTCTTCAGCTCGTCGTGGCGGGAGGCCACCTCCGGCGAGTGCCGCCGCCGCGGCGGCGGC-TGCAACATGGTGTTCGACTGGCACGAGATGTTCGTCGACGGCCGC-TCGGGCGGCGGCGGGAGGAGGCTGC-TCGGCGACCTGCCGCAGC-ACGAGTGCCAGAAGATGCTGCTGGTGTTCAACCGCCGCTG-CTGGTTCAAGTCGCACCGCCACCCCTACGTCGGCCGCGCCATGAACGGCCTCACCGACTACCTCATGGC-GTAGCACCCATGCATGCACACA-CAATTACTCCCTCCGTTTCATATCAAACTAGCCATCTTAATTTTGATCAAATTT-ATGAAAAAACATAG-CAACATTTTTCATAT-CAAAATATATTTACGGTTAGATTT-AACAAAACTAATTTGAT-GTTTTAGATGTTGCTATTGTTTTCTATAAACTCAATAAAAAATTTTAAAAAATTAATTAGGAAAAAGATCAAGCATCTTATATAATATGAAACGGAGGGAGTAACTAATACGTATACGTGTATTCTTACACATGTACGTACGTATATATGGCAGCGGACGGTTTCGATGATGTGTATGTATGTTGATTGATTCCTGTCAAATTAATTTCTAGAGGATTAAGCCTTAGAAGGTGATCACGGTCGATGTACTTTGAATTTTGACGAATTAATTAATTTAAATTGTAAAGGTGGTGAAATTTTTTGAAAAAAAAA] [+] EMBL AK106991 [ATAAACCCGGCGCCGACGACGACGCCACAATGATGGCCGGCCGGCGAAGCGCCCACGTCGACGCCGCCGTCATCGCCGCCGCCGCCCTCCTCCTCCTCGCCGCGACGGCGGCGGA GGGCGCCGTGTCCAGCTGGGAGTCCAACTCCGACGAGGACTACCACATCTTCGTGGACAACCGCATGTCGGACAACATGCACCTGAGCTGCTACGCCGTGCAGGGCGGCGGCCGGAGCGAGTTCTACCACAGCTTCCGCGCCGACCCCGGGAGGGAGGTGCAGCTGCCGTACCTGCAGCCGGCGCCCAACGCCCGCCTCGTCTGCAAGTGGGCGTGCGCGGGGAACTACCTGAAGGGCGTCACCCTCTTCAGCTCGTCGTGGCGGGAGGCCACCTCCGGCGAGTGCCGCCGCCGCGGCGGCGGC TGCAACATGGTGTTCGACTGGCACGAGATGTTCGTCGACGGCCGC TCGGGCGGCGGCGGGAGGAGGCTGC TCGGCGACCTGCCGCAGC ACGAGTGCCAGAAGATGCTGCTGGTGTTCAACCGCCGCTG CTGGTTCAAGTCGCACCGCCACCCCTACGTCGGCCGCGCCATGAACGGCCTCACCGACTACCTCATGGC GTAGCACCCATGCATGCACACA CAATTACTCCCTCCGTTTCATATCAAACTAGCCATCTTAATTTTGATCAAATTT ATGAAAAAACATAG CAACATTTTTCATAT CAAAATATATTTACGGTTAGATTT AACAAAACTAATTTGAT GTTTTAGATGTTGCTATTGTTTTCTATAAACTCAATAAAAAATTTTAAAAAATTAATTAGGAAAAAGATCAAGCATCTTATATAATATGAAACGGAGGGAGTAACTAATACGTATACGTGTATTCTTACACATGTACGTACGTATATATGGCAGCGGACGGTTTCGATGATGTGTATGTATGTTGATTGATTCCTGTCAAATTAATTTCTAGAGGATTAAGCCTTAGAAGGTGATCACGGTCGATGTACTTTGAATTTTGACGAATTAATTAATTTAAATTGTAAAGGTGGTG ] [+] EMBL AU075648 [ggAAACCCGGCGCCGACGACGACGCCACAATGATGGCCGGCCGGCGAA CGCCCACGTCGACGCCGCCGTCATCGCCGCCGCCGCCCTCCTCCTCCTCGCCGCGACGGCGGCGGA GGGCGCCGTGTCCAGCTGGGAGTCCAACTCCGACGAGGACTACCACATCTTCGTGGACAACCGCATGTCGGACAACATGCACCTGAGCTGCTACGCCGTGCAGGGCGGCGGCCGGAGCGAGTTCTACCACAGCTTCCGCGCCGACCCCGGGAGGGAGGTGCAGCTGCCGTACCTGCAGCCGGCGCCCAACGCCCGCCTCGTCTGCAAGTGGGCGTGCGCGGGGAACTACCTGAAGGGCGTCACCCTCTTCAGCTCGTCGTGGCGGGAGGCCACCTCCGGCGAGTGCCGCCGCCGCGGCGGCGGCTTGCAACATGGTGTTCGACGGGCACGAGATGTTCGTCGACGGCCGCTTCGGGCGGCGGCGGGAGGAGGCTGCTTCGGCGAACTGCCGCAGCAACGAGTGCCAGAAGA ] [+] EMBL C71692 [ ACGCCACAATNATGGCCGGCCGGCGAAG GCCCACGTCGACGCCGCCGTCATCGCCGCCGCCGCCCTCCTCCTCCTCGCCGCGACGG GGGGNANGGGCGCCGTGTCCAGCTGGGAGTCCAACTCCNACGAGGACTACCACATCTTCNTGGACAACCGCATGTNGGACAACATGCACCTNAGCTGCTACGCCGTGCAGGGCGGCGGCCGGAGCGAGTTCTACCACAGCTTCCGCGCCGACCCCGGGAGGAGGGTGCAGCTGCCGTACCTGCAGCCGGCGCCCAACGCCCGCTTCGTCTGCAAGTGGGCGTNCGCGGGGAACTACCTGAAGG ] [+] EMBL AU075647 [ nACCTGCCGCAGN ACGAGTGCCAGAAGCTGNTGCTGGTGTTCAACCGCCGCTGCCTGGTTCAAGTCGCACCGCCACCCCTACGTCGGCCGCGCCATGAACGGCCTCACCGACTACCTCATGGC GTAGCACCCATGCATGCACACA CAATTACTCCCTCCGTTTCATATCAAACTAGCCATCTTAATTTTGATCAAATTT ATGAAAAAACATAG CAACATTTTTCATAT CAAAATATATTTACGGTTAGATTT AACAAAACTAATTTGAT GTTTTAGATGTTGCTATTGTTTTCTATAAACTCAATAAAAAATTTTAAAAAATTAATTAGGAAAAAGATCAAGCATCTTATATAATATGAAACGGAGGGAGTAACTAATACGTATACGTGTATTCTTACACATGTACGTACGTATATATGGCAGCGGACGGTTTCGATGATGTGTATGTATGTTGATTGATTCCTGTCAAATTAATTTCTAGAGGATTAAGCCTTAGAAGGTGATCACGGTCGATGTACTTTGAATTTTGACGAATTAATTAATTTAAATTGTAAAGGTGGTGAAATTTTTTGAAAAAAAAA] [+] EMBL AU093741 [ ACTACCTCATGGCGGTAGCACCCATGCATGCACACACCAATTACTCCCTCCGTTTCATATCAAACTAGCCATCTTAATTTTGATCAAATTTCATGAAAAAACATAGCCAACATTTTTCATATCCAAAATATATTTACGGTTAGATTTCAACAAAACTAATTTGATCGTTTTAGATGTTGCTATTGTTTTCTATAAACTCAATAAAAAATTTTAAAAAATTAATTAGGAAAAAGATCAAGCATCTTATATAATATGAAACGGAGGGAGTAACTAATACGTATACGTGTATTCTTACACATGTACGTACGTATATATGGCAGCGGACGGTTTCGATGATGTGTATGTATGTTGATTGATTCCTGTCAAATTAATTTCTAGAGGATTAAGCCTTAGAAGGTGATCACGGTCGATGTACTTTGAATTTTGACGAATTAATTAATTTAAATTGTAAAGGTGGTGAAATTTTTTGAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||