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Oryza sativa
cluster # 8642 cluster # 8642       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8642#0 length = 1631 sequences # 3  
consensus_8642#1 length = 998 sequences # 1  
consensus_8642#2 length = 872 sequences # 1  

consensusID : consensus_8642#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1631
fasta sequence
                              [TATATATATTCCTGCTCTGTTCTGTTCTTATCTTTTGCTTTGAGCCAAAAAGGTTAGAGCTTTTGTGTTCTTCCCCCACAAATATCCCCTAGTGCCTTTTGTTTGGCCGTGGTGTGGAAAAGCATATGAATGGGGGAGCATCTCAATTGGCATACTGCTGTTGCCCCCCAGCTTAGCTATCCCTTTCCATCCCTGCAAGAACCCTTCTTTATAGATCTGTGCCCTTGCTGTTCATGGAACCCTGTGATTGAGGGGTTTCCTCATTTGGTCTCTCACTCGCGGTGTAAACAAAGTATATGCTCCAAGTAAGCTGCTACTTTTAGCTGCTTCTCTGATTCTTGAGTGATCTCCAAGTGCAGAAGGAGAGGGAGGAGGAGATGGGGGAGTGCGGCGGCGGCGAGTACAGGTGCTGGGAGGAGCTTCTGCCGGACGCGCTGGGGCTCGTCTTCCGGAACCTGCCGCTCCGGGAGGTGCTGACGGTGGTGCCACGGGTGTGCAAGTCGTGGAGCCGGGTGGTGGCCGGGCCGTACTGCTGGCAGGAGATCGACATCGAGGAGTGGCGGCAGCAGCAGGGCAAGCCCGAGCAGCTCGTCCGCATGGTGGAGATGCTCGTCGCACGCAGCTGCGGCTCCTGCCGCCGCATCAGCGTCTCCGGCCTCCCCGGCGACCCGCTCTTCTCCTTCATCGGAGACCATGCACGGGCACTGAGGACGCTGGAGATTCCACGGAGCGAGATCAGCGACGCGGCGGTGGAGAGCGTGGCGCCGAGGCTGCCCAACGTGACGTTCCTGGACATCAGCAGCTGCACCAAGATCGGGGCGCGCGCGCTGGAGGCGTTCGGCAAGAACTGCAAGTCGCTGGTGGGGCTCCGGCGGGTGATGCACCCGACGGACGTCGCCGGCAAGGCGTGCCAGCGCGACGAGGCGCGCGCCATCGCCTGCACCATGCCGAGGCTCCGGCACCTGGAGATGGGCTACATGGTGATCGCGACGGATGCGGTGCTCGACATCCTCGCGCGGTGCCGCGAACTCCGGTTCCTCGACCTCCGCGGCTGCTGGGCCGTCGACGACAAGTTCCTGCAGGAGAGGCACCCGGGGCTGAGGGTGCTCGGCCCCGGCGTCGACGACTGCTTCGAGAACAGCTACCTGGAGGAGTGCTCCGACTACTCCGACGACTCCTCCATCTACTCGTGGGAGCTCATGGAGGACGACGACGACGACTACTACGCCGTCGGGAGCGACGACGAGGCCATTTGGGACGACGGCCAGGGCCTCGAGAACCTGGAGGTCAGGTTCTACGGCGGCGGCTTCAGCGAGAGCTATGCTGGCTTCGATTGGCCACCATCACCATGACCATGAGAGCAGCTCAGCTCAGCTCAGTCCCTGACCTCACTGTCCTTGCTCTTCCTCTCGAGCCGTGTACCTAAGCTTGCAGTTGCAGTCTCGCAGATGTGTTGTTGTACTCTGTGTGTGTGCGCGTGTGCCAGTGTGTCATCAGCATCACTAGCTTGCAGTGCAGATATGTGTGAGTGAACTTCTACGGCTAGTTGTTACTACTACTACATCCAGATGTAAACTTTGGTGTTTACATGAAGAAGCAATGCAAATGCAATATGTGGTGAAAAAAAAAAA]

[+] EMBL C25843               [TATATATATTCCTGCTCTGTTCTGTTCTTATCTTTTGCTTTGAGCCAAAAAGGTTAGAGCTTTTGTGTTCTTCCCCCACAAATATCCCCTAGTGCCTTTTGTTTGGCCGTGGTGTGGAAAAGCATATGAATGGGGGAGCATCTCAATTGGCATACTGCTGTTGCCCCCCAGCTTAGCTATCCCTTTCCATCCCTGCAAGAACCCTTCTTTATAGATCTGTGCCCTTGCTGTTCATGGAACCCTGTGATTGAGGGGTTTCCTCATTTGGTCTCTCACTCGCGGTGTAAACAAAGTATATGCTCCAAGTAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK103417             [                                            CCAAAAAGGTTAGAGCTTTTGTGTTCTTCCCCCACAAATATCCCCTAGTGCCTTTTGTTTGGCCGTGGTGTGGAAAAGCATATGAATGGGGGAGCATCTCAATTGGCATACTGCTGTTGCCCCCCAGCTTAGCTATCCCTTTCCATCCCTGCAAGAACCCTTCTTTATAGATCTGTGCCCTTGCTGTTCATGGAACCCTGTGATTGAGGGGTTTCCTCATTTGGTCTCTCACTCGCGGTGTAAACAAAGTATATGCTCCAAGTAAGCTGCTACTTTTAGCTGCTTCTCTGATTCTTGAGTGATCTCCAAGTGCAGAAGGAGAGGGAGGAGGAGATGGGGGAGTGCGGCGGCGGCGAGTACAGGTGCTGGGAGGAGCTTCTGCCGGACGCGCTGGGGCTCGTCTTCCGGAACCTGCCGCTCCGGGAGGTGCTGACGGTGGTGCCACGGGTGTGCAAGTCGTGGAGCCGGGTGGTGGCCGGGCCGTACTGCTGGCAGGAGATCGACATCGAGGAGTGGCGGCAGCAGCAGGGCAAGCCCGAGCAGCTCGTCCGCATGGTGGAGATGCTCGTCGCACGCAGCTGCGGCTCCTGCCGCCGCATCAGCGTCTCCGGCCTCCCCGGCGACCCGCTCTTCTCCTTCATCGGAGACCATGCACGGGCACTGAGGACGCTGGAGATTCCACGGAGCGAGATCAGCGACGCGGCGGTGGAGAGCGTGGCGCCGAGGCTGCCCAACGTGACGTTCCTGGACATCAGCAGCTGCACCAAGATCGGGGCGCGCGCGCTGGAGGCGTTCGGCAAGAACTGCAAGTCGCTGGTGGGGCTCCGGCGGGTGATGCACCCGACGGACGTCGCCGGCAAGGCGTGCCAGCGCGACGAGGCGCGCGCCATCGCCTGCACCATGCCGAGGCTCCGGCACCTGGAGATGGGCTACATGGTGATCGCGACGGATGCGGTGCTCGACATCCTCGCGCGGTGCCGCGAACTCCGGTTCCTCGACCTCCGCGGCTGCTGGGCCGTCGACGACAAGTTCCTGCAGGAGAGGCACCCGGGGCTGAGGGTGCTCGGCCCCGGCGTCGACGACTGCTTCGAGAACAGCTACCTGGAGGAGTGCTCCGACTACTCCGACGACTCCTCCATCTACTCGTGGGAGCTCATGGAGGACGACGACGACGACTACTACGCCGTCGGGAGCGACGACGAGGCCATTTGGGACGACGGCCAGGGCCTCGAGAACCTGGAGGTCAGGTTCTACGGCGGCGGCTTCAGCGAGAGCTATGCTGGCTTCGATTGGCCACCATCACCATGACCATGAGAGCAGCTCAGCTCAGCTCAGTCCCTGACCTCACTGTCCTTGCTCTTCCTCTCGAGCCGTGTACCTAAGCTTGCAGTTGCAGTCTCGCAGATGTGTTGTTGTACTCTGTGTGTGTGCGCGTGTGCCAGTGTGTCATCAGCATCACTAGCTTGCAGTGCAGATATGTGTGAGTGAACTTCTACGGCTAGTTGTTACTACTACTACATCCAGATGTAAACTTTGG                                                  ]
[+] EMBL AU172549             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       gcnACGAGGCCATTTGGGACGACGGCCAGGNCCTCGAGAACCTGNAGGTCAGGTTCTACGGCGGCGGCTTCAGCGAGANCTATGCTGGCTTCGATTGGCCACCATCNCCATGACCATGAGAGCAGCTCAGCTCAGCTCAGTCCCTGACCTCACTGTCCTTGCTCTTCCTCTCGAGCCGTGTACCTAAGCTTGCAGTTGCAGTCTCGCAGATGTGTTGTTGTACTCTGTGTGTNTGCGCGTGTGCCAGTGTGTCATCAGCATCACTAGCTTGCAGTGCAGATATGTGTGAGTGAACTTCTACGGCTAGTTGTTACTACTACTACATCCAGATGTAAACTTTGGTGTTTACATGAAGAAGCAATGCAAATGCAATATGTGGTGAAAAAAAAAAA]


>consensus_8642#0 TATATATATTCCTGCTCTGTTCTGTTCTTATCTTTTGCTTTGAGCCAAAAAGGTTAGAGC TTTTGTGTTCTTCCCCCACAAATATCCCCTAGTGCCTTTTGTTTGGCCGTGGTGTGGAAA AGCATATGAATGGGGGAGCATCTCAATTGGCATACTGCTGTTGCCCCCCAGCTTAGCTAT CCCTTTCCATCCCTGCAAGAACCCTTCTTTATAGATCTGTGCCCTTGCTGTTCATGGAAC CCTGTGATTGAGGGGTTTCCTCATTTGGTCTCTCACTCGCGGTGTAAACAAAGTATATGC TCCAAGTAAGCTGCTACTTTTAGCTGCTTCTCTGATTCTTGAGTGATCTCCAAGTGCAGA AGGAGAGGGAGGAGGAGATGGGGGAGTGCGGCGGCGGCGAGTACAGGTGCTGGGAGGAGC TTCTGCCGGACGCGCTGGGGCTCGTCTTCCGGAACCTGCCGCTCCGGGAGGTGCTGACGG TGGTGCCACGGGTGTGCAAGTCGTGGAGCCGGGTGGTGGCCGGGCCGTACTGCTGGCAGG AGATCGACATCGAGGAGTGGCGGCAGCAGCAGGGCAAGCCCGAGCAGCTCGTCCGCATGG TGGAGATGCTCGTCGCACGCAGCTGCGGCTCCTGCCGCCGCATCAGCGTCTCCGGCCTCC CCGGCGACCCGCTCTTCTCCTTCATCGGAGACCATGCACGGGCACTGAGGACGCTGGAGA TTCCACGGAGCGAGATCAGCGACGCGGCGGTGGAGAGCGTGGCGCCGAGGCTGCCCAACG TGACGTTCCTGGACATCAGCAGCTGCACCAAGATCGGGGCGCGCGCGCTGGAGGCGTTCG GCAAGAACTGCAAGTCGCTGGTGGGGCTCCGGCGGGTGATGCACCCGACGGACGTCGCCG GCAAGGCGTGCCAGCGCGACGAGGCGCGCGCCATCGCCTGCACCATGCCGAGGCTCCGGC ACCTGGAGATGGGCTACATGGTGATCGCGACGGATGCGGTGCTCGACATCCTCGCGCGGT GCCGCGAACTCCGGTTCCTCGACCTCCGCGGCTGCTGGGCCGTCGACGACAAGTTCCTGC AGGAGAGGCACCCGGGGCTGAGGGTGCTCGGCCCCGGCGTCGACGACTGCTTCGAGAACA GCTACCTGGAGGAGTGCTCCGACTACTCCGACGACTCCTCCATCTACTCGTGGGAGCTCA TGGAGGACGACGACGACGACTACTACGCCGTCGGGAGCGACGACGAGGCCATTTGGGACG ACGGCCAGGGCCTCGAGAACCTGGAGGTCAGGTTCTACGGCGGCGGCTTCAGCGAGAGCT ATGCTGGCTTCGATTGGCCACCATCACCATGACCATGAGAGCAGCTCAGCTCAGCTCAGT CCCTGACCTCACTGTCCTTGCTCTTCCTCTCGAGCCGTGTACCTAAGCTTGCAGTTGCAG TCTCGCAGATGTGTTGTTGTACTCTGTGTGTGTGCGCGTGTGCCAGTGTGTCATCAGCAT CACTAGCTTGCAGTGCAGATATGTGTGAGTGAACTTCTACGGCTAGTTGTTACTACTACT ACATCCAGATGTAAACTTTGGTGTTTACATGAAGAAGCAATGCAAATGCAATATGTGGTG AAAAAAAAAAA



consensusID : consensus_8642#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 998
fasta sequence
                              [ATACACCCATTCTCTCCAGTGGATTATTCACCGTTCTCTCCTGCTGCCATTGCACGTCTTGCTTGCTGCCAATCCCAGATTCATGCACGGGCACTGAGGACGCTGGAGATTCCACGGAGCGAGATCAGCGACGCGGCGGTGGAGAGCGTGGCGCCGAGGCTGCCCAACGTGACGTTCCTGGACATCAGCAGCTGCACCAAGATCGGGGCGCGCGCGCTGGAGGCGTTCGGCAAGAACTGCAAGTCGCTGGTGGGGCTCCGGCGGGTGATGCACCCGACGGACGTCGCCGGCAAGGCGTGCCAGCGCGACGAGGCGCGCGCCATCGCCTGCACCATGCCGAGGCTCCGGCACCTGGAGATGGGCTACATGGTGATCGCGACGGATGCGGTGCTCGACATCCTCGCGCGGTGCCGCGACCTCCGGTTCCTCGACCTCCGCGGCTGCTGGGCCGTCGACGACAAGTTCCTGCAGGAGAGGCACCCGGGGCTGAGGGTGCTCGGCCCCGGCGTCGACGACTGCTTCGAGAACAGCTACCTGGAGGAGTGCTCCGACTACTCCGACGACTCCTCCATCTACTCGTGGGAGCTCATGGAGGACGACGACGACGGCTACTACGCCGTCGGGAGCGACGACGAGGCCATTTGGGACGGCGGCCAGGCCTCGAGAACCTGGAGGTCAGGTTCTACGGCGGCGGCTTCAGCGAGAGCTATGCTGGCTTCGATTGGCCACCATCACCATGACCATGAGAGCAGCTCAGCTCAGCTCAGTCCCTGACCTCACTGTCCTTGCTCTTCCTCTCGAGCCGTGTACCTAAGCTTGCAGTTGCAGTCTCGCAGATGTGTTGTTGTACTCTGTGTGTGTGCGCGTGTGCCAGTGTGTCATCAGCATCACTAGCTTGCAGTGCAGATATGTGTGAGTGAACTTCTACGGCTAGTTGTTACTACTACTACATCCAGATGTAAACTTTGGTGTTTACATGAAGAAGCAATGCAAATGCA]

[+] EMBL AK069370             [ATACACCCATTCTCTCCAGTGGATTATTCACCGTTCTCTCCTGCTGCCATTGCACGTCTTGCTTGCTGCCAATCCCAGATTCATGCACGGGCACTGAGGACGCTGGAGATTCCACGGAGCGAGATCAGCGACGCGGCGGTGGAGAGCGTGGCGCCGAGGCTGCCCAACGTGACGTTCCTGGACATCAGCAGCTGCACCAAGATCGGGGCGCGCGCGCTGGAGGCGTTCGGCAAGAACTGCAAGTCGCTGGTGGGGCTCCGGCGGGTGATGCACCCGACGGACGTCGCCGGCAAGGCGTGCCAGCGCGACGAGGCGCGCGCCATCGCCTGCACCATGCCGAGGCTCCGGCACCTGGAGATGGGCTACATGGTGATCGCGACGGATGCGGTGCTCGACATCCTCGCGCGGTGCCGCGACCTCCGGTTCCTCGACCTCCGCGGCTGCTGGGCCGTCGACGACAAGTTCCTGCAGGAGAGGCACCCGGGGCTGAGGGTGCTCGGCCCCGGCGTCGACGACTGCTTCGAGAACAGCTACCTGGAGGAGTGCTCCGACTACTCCGACGACTCCTCCATCTACTCGTGGGAGCTCATGGAGGACGACGACGACGGCTACTACGCCGTCGGGAGCGACGACGAGGCCATTTGGGACGGCGGCCAGGCCTCGAGAACCTGGAGGTCAGGTTCTACGGCGGCGGCTTCAGCGAGAGCTATGCTGGCTTCGATTGGCCACCATCACCATGACCATGAGAGCAGCTCAGCTCAGCTCAGTCCCTGACCTCACTGTCCTTGCTCTTCCTCTCGAGCCGTGTACCTAAGCTTGCAGTTGCAGTCTCGCAGATGTGTTGTTGTACTCTGTGTGTGTGCGCGTGTGCCAGTGTGTCATCAGCATCACTAGCTTGCAGTGCAGATATGTGTGAGTGAACTTCTACGGCTAGTTGTTACTACTACTACATCCAGATGTAAACTTTGGTGTTTACATGAAGAAGCAATGCAAATGCA]


>consensus_8642#1 ATACACCCATTCTCTCCAGTGGATTATTCACCGTTCTCTCCTGCTGCCATTGCACGTCTT GCTTGCTGCCAATCCCAGATTCATGCACGGGCACTGAGGACGCTGGAGATTCCACGGAGC GAGATCAGCGACGCGGCGGTGGAGAGCGTGGCGCCGAGGCTGCCCAACGTGACGTTCCTG GACATCAGCAGCTGCACCAAGATCGGGGCGCGCGCGCTGGAGGCGTTCGGCAAGAACTGC AAGTCGCTGGTGGGGCTCCGGCGGGTGATGCACCCGACGGACGTCGCCGGCAAGGCGTGC CAGCGCGACGAGGCGCGCGCCATCGCCTGCACCATGCCGAGGCTCCGGCACCTGGAGATG GGCTACATGGTGATCGCGACGGATGCGGTGCTCGACATCCTCGCGCGGTGCCGCGACCTC CGGTTCCTCGACCTCCGCGGCTGCTGGGCCGTCGACGACAAGTTCCTGCAGGAGAGGCAC CCGGGGCTGAGGGTGCTCGGCCCCGGCGTCGACGACTGCTTCGAGAACAGCTACCTGGAG GAGTGCTCCGACTACTCCGACGACTCCTCCATCTACTCGTGGGAGCTCATGGAGGACGAC GACGACGGCTACTACGCCGTCGGGAGCGACGACGAGGCCATTTGGGACGGCGGCCAGGCC TCGAGAACCTGGAGGTCAGGTTCTACGGCGGCGGCTTCAGCGAGAGCTATGCTGGCTTCG ATTGGCCACCATCACCATGACCATGAGAGCAGCTCAGCTCAGCTCAGTCCCTGACCTCAC TGTCCTTGCTCTTCCTCTCGAGCCGTGTACCTAAGCTTGCAGTTGCAGTCTCGCAGATGT GTTGTTGTACTCTGTGTGTGTGCGCGTGTGCCAGTGTGTCATCAGCATCACTAGCTTGCA GTGCAGATATGTGTGAGTGAACTTCTACGGCTAGTTGTTACTACTACTACATCCAGATGT AAACTTTGGTGTTTACATGAAGAAGCAATGCAAATGCA



consensusID : consensus_8642#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 872
fasta sequence
                              [CGTGCTCTAATCCATTTCCAGCAATTAACTGTAACTCAATGGTTAATTATCTGGTTTATTACTAGCAGTAATTCTTGGTGCTGAATTTTGGTGGTGGTTTTGCAAGTGCACGGGCACTGAGGACGCTGGAGATTCCACGGAGCGAGATCAGCGACGCGGCGGTGGAGAGCGTGGCGCCGAGGCTGCCCAACGTGACGTTCCTGGACATCAGCAGCTGCACCAAGATCGGGGCGCGCGCGCTGGAGGCGTTCGGCAAGAACTGCAAGTCGCTGGTGGGGCTCCGGCGGGTGATGCACCCGACGGACGTCGCCGGCAAGGCGTGCCAGCGCGACGAGGCGCGCGCCATCGCCTGCACCATGCCGAGGCTCCGGCACCTGGAGATGGGCTACATGGTGATCGCGACGGATGCGGTGCTCGACATCCTCGCGCGGTGCCGCGACCTCCGGTTCCTCGACCTCCGCGGCTGCTGGGCCGTCGACGACAAGTTCCTGCAGGAGAGGCACCCGGGGCTGAGGGTGCTCGGCCCCGGCGTCGACGACTGCTTCGAGAACAGCTACCTGGAGGAGTGCTCCGACTACTCCGACGACTCCTCCATCTACTCGTGGGAGCTCATGGAGGACGACGACGACGACTACTACGCCGTCGGGAGCGACGACGAGGCCATTTGGGACGACGGCCAGGGCCTCGAGAACCTGGAGGTCAGGTTCTACGGCGGCGGCTTCAGCGAGAGCTATGCTGGCTTCGATTGGCCACCATCACCATGACCATGAGAGCAGCTCAGCTCAGCTCAGTCCCTGACCTCACTGTCCTTGCTCTTCCTCTCGAGCCGTGTACCTAAGCTTGCAGTTGCAGTCTCGCAGATGTGTTGTTGT]

[-] EMBL AK107806             [CGTGCTCTAATCCATTTCCAGCAATTAACTGTAACTCAATGGTTAATTATCTGGTTTATTACTAGCAGTAATTCTTGGTGCTGAATTTTGGTGGTGGTTTTGCAAGTGCACGGGCACTGAGGACGCTGGAGATTCCACGGAGCGAGATCAGCGACGCGGCGGTGGAGAGCGTGGCGCCGAGGCTGCCCAACGTGACGTTCCTGGACATCAGCAGCTGCACCAAGATCGGGGCGCGCGCGCTGGAGGCGTTCGGCAAGAACTGCAAGTCGCTGGTGGGGCTCCGGCGGGTGATGCACCCGACGGACGTCGCCGGCAAGGCGTGCCAGCGCGACGAGGCGCGCGCCATCGCCTGCACCATGCCGAGGCTCCGGCACCTGGAGATGGGCTACATGGTGATCGCGACGGATGCGGTGCTCGACATCCTCGCGCGGTGCCGCGACCTCCGGTTCCTCGACCTCCGCGGCTGCTGGGCCGTCGACGACAAGTTCCTGCAGGAGAGGCACCCGGGGCTGAGGGTGCTCGGCCCCGGCGTCGACGACTGCTTCGAGAACAGCTACCTGGAGGAGTGCTCCGACTACTCCGACGACTCCTCCATCTACTCGTGGGAGCTCATGGAGGACGACGACGACGACTACTACGCCGTCGGGAGCGACGACGAGGCCATTTGGGACGACGGCCAGGGCCTCGAGAACCTGGAGGTCAGGTTCTACGGCGGCGGCTTCAGCGAGAGCTATGCTGGCTTCGATTGGCCACCATCACCATGACCATGAGAGCAGCTCAGCTCAGCTCAGTCCCTGACCTCACTGTCCTTGCTCTTCCTCTCGAGCCGTGTACCTAAGCTTGCAGTTGCAGTCTCGCAGATGTGTTGTTGT]


>consensus_8642#2 CGTGCTCTAATCCATTTCCAGCAATTAACTGTAACTCAATGGTTAATTATCTGGTTTATT ACTAGCAGTAATTCTTGGTGCTGAATTTTGGTGGTGGTTTTGCAAGTGCACGGGCACTGA GGACGCTGGAGATTCCACGGAGCGAGATCAGCGACGCGGCGGTGGAGAGCGTGGCGCCGA GGCTGCCCAACGTGACGTTCCTGGACATCAGCAGCTGCACCAAGATCGGGGCGCGCGCGC TGGAGGCGTTCGGCAAGAACTGCAAGTCGCTGGTGGGGCTCCGGCGGGTGATGCACCCGA CGGACGTCGCCGGCAAGGCGTGCCAGCGCGACGAGGCGCGCGCCATCGCCTGCACCATGC CGAGGCTCCGGCACCTGGAGATGGGCTACATGGTGATCGCGACGGATGCGGTGCTCGACA TCCTCGCGCGGTGCCGCGACCTCCGGTTCCTCGACCTCCGCGGCTGCTGGGCCGTCGACG ACAAGTTCCTGCAGGAGAGGCACCCGGGGCTGAGGGTGCTCGGCCCCGGCGTCGACGACT GCTTCGAGAACAGCTACCTGGAGGAGTGCTCCGACTACTCCGACGACTCCTCCATCTACT CGTGGGAGCTCATGGAGGACGACGACGACGACTACTACGCCGTCGGGAGCGACGACGAGG CCATTTGGGACGACGGCCAGGGCCTCGAGAACCTGGAGGTCAGGTTCTACGGCGGCGGCT TCAGCGAGAGCTATGCTGGCTTCGATTGGCCACCATCACCATGACCATGAGAGCAGCTCA GCTCAGCTCAGTCCCTGACCTCACTGTCCTTGCTCTTCCTCTCGAGCCGTGTACCTAAGC TTGCAGTTGCAGTCTCGCAGATGTGTTGTTGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8642#0      TATATATATTCCTGCTCTGTTCTGTTCTTATCTTTTGCTTTGAGCCAAAAAGGTTAGAGC 60
consensus_8642#1      ------------------------------------------------------------
consensus_8642#2      ------------------------------------------------------------
                                                                                  

consensus_8642#0      TTTTGTGTTCTTCCCCCACAAATATCCCCTAGTGCCTTTTGTTTGGCCGTGGTGTGGAAA 120
consensus_8642#1      ------------------------------------------------------------
consensus_8642#2      ------------------------------------------------------------
                                                                                  

consensus_8642#0      AGCATATGAATGGGGGAGCATCTCAATTGGCATACTGCTGTTGCCCCCCAGCTTAGCTAT 180
consensus_8642#1      ------------------------------------------------------------
consensus_8642#2      ------------------------------------------------------------
                                                                                  

consensus_8642#0      CCCTTTCCATCCCTGCAAGAACCCTTCTTTATAGATCTGTGCCCTTGCTGTTCATGGAAC 240
consensus_8642#1      ------------------------------------------------------------
consensus_8642#2      ------------------------------------------------------------
                                                                                  

consensus_8642#0      CCTGTGATTGAGGGGTTTCCTCATTTGGTCTCTCACTCGCGGTGTAAACAAAGTATATGC 300
consensus_8642#1      ------------------------------------------------------------
consensus_8642#2      ------------------------------------------------------------
                                                                                  

consensus_8642#0      TCCAAGTAAGCTGCTACTTTTAGCTGCTTCTCTGATTCTTGAGTGATCTCCAAGTGCAGA 360
consensus_8642#1      ------------------------------------------------------------
consensus_8642#2      ------------------------------------------------------------
                                                                                  

consensus_8642#0      AGGAGAGGGAGGAGGAGATGGGGGAGTGCGGCGGCGGCGAGTACAGGTGCTGGGAGGAGC 420
consensus_8642#1      ------------------------------------------------------------
consensus_8642#2      ------------------------------------------------------------
                                                                                  

consensus_8642#0      TTCTGCCGGACGCGCTGGGGCTCGTCTTCCGGAACCTGCCGCTCCGGGAGGTGCTGACGG 480
consensus_8642#1      ------------------------------------------------------------
consensus_8642#2      ------------------------------------------------------------
                                                                                  

consensus_8642#0      TGGTGCCACGGGTGTGCAAGTCGTGGAGCCGGGTGGTGGCCGGGCCGTACTGCTGGCAGG 540
consensus_8642#1      ------------------------------------------------------------
consensus_8642#2      ------------------------------------------------------------
                                                                                  

consensus_8642#0      AGATCGACATCGAGGAGTGGCGGCAGCAGCAGGGCAAGCCCGAGCAGCTCGTCCGCATGG 600
consensus_8642#1      ------------------------------------------------------------
consensus_8642#2      -------------------------------------------------CGTGCTCTAAT 11
                                                                                  

consensus_8642#0      TGGAGATGCTCGTCGCACGCAGCTGCGGCTCCTGCCGCCGCA--TCAGCGTCTCCGGCCT 658
consensus_8642#1      ------------ATACACCCATTCTCTCCAGTGGATTATTCA--CCGTTCTCTCCTGCTG 46
consensus_8642#2      CCATTTCCAGCAATTAACTGTAACTCAATGGTTAATTATCTGGTTTATTACTAGCAGTAA 71
                                      **       *                            * *   

consensus_8642#0      CCCCGGCGACCCGCTCTTCTCCTTCATCGGAGAC-CATGCACGGGCACTGAGGACGCTGG 717
consensus_8642#1      CCATTGCACGTCTTGCTTGCTGCCAATCCCAGATTCATGCACGGGCACTGAGGACGCTGG 106
consensus_8642#2      TTCTTGGTGCTGAATTTTGGTGGTGGTTTTGCAA--GTGCACGGGCACTGAGGACGCTGG 129
                           *          **        *     *    ***********************

consensus_8642#0      AGATTCCACGGAGCGAGATCAGCGACGCGGCGGTGGAGAGCGTGGCGCCGAGGCTGCCCA 777
consensus_8642#1      AGATTCCACGGAGCGAGATCAGCGACGCGGCGGTGGAGAGCGTGGCGCCGAGGCTGCCCA 166
consensus_8642#2      AGATTCCACGGAGCGAGATCAGCGACGCGGCGGTGGAGAGCGTGGCGCCGAGGCTGCCCA 189
                      ************************************************************

consensus_8642#0      ACGTGACGTTCCTGGACATCAGCAGCTGCACCAAGATCGGGGCGCGCGCGCTGGAGGCGT 837
consensus_8642#1      ACGTGACGTTCCTGGACATCAGCAGCTGCACCAAGATCGGGGCGCGCGCGCTGGAGGCGT 226
consensus_8642#2      ACGTGACGTTCCTGGACATCAGCAGCTGCACCAAGATCGGGGCGCGCGCGCTGGAGGCGT 249
                      ************************************************************

consensus_8642#0      TCGGCAAGAACTGCAAGTCGCTGGTGGGGCTCCGGCGGGTGATGCACCCGACGGACGTCG 897
consensus_8642#1      TCGGCAAGAACTGCAAGTCGCTGGTGGGGCTCCGGCGGGTGATGCACCCGACGGACGTCG 286
consensus_8642#2      TCGGCAAGAACTGCAAGTCGCTGGTGGGGCTCCGGCGGGTGATGCACCCGACGGACGTCG 309
                      ************************************************************

consensus_8642#0      CCGGCAAGGCGTGCCAGCGCGACGAGGCGCGCGCCATCGCCTGCACCATGCCGAGGCTCC 957
consensus_8642#1      CCGGCAAGGCGTGCCAGCGCGACGAGGCGCGCGCCATCGCCTGCACCATGCCGAGGCTCC 346
consensus_8642#2      CCGGCAAGGCGTGCCAGCGCGACGAGGCGCGCGCCATCGCCTGCACCATGCCGAGGCTCC 369
                      ************************************************************

consensus_8642#0      GGCACCTGGAGATGGGCTACATGGTGATCGCGACGGATGCGGTGCTCGACATCCTCGCGC 1017
consensus_8642#1      GGCACCTGGAGATGGGCTACATGGTGATCGCGACGGATGCGGTGCTCGACATCCTCGCGC 406
consensus_8642#2      GGCACCTGGAGATGGGCTACATGGTGATCGCGACGGATGCGGTGCTCGACATCCTCGCGC 429
                      ************************************************************

consensus_8642#0      GGTGCCGCGAACTCCGGTTCCTCGACCTCCGCGGCTGCTGGGCCGTCGACGACAAGTTCC 1077
consensus_8642#1      GGTGCCGCGACCTCCGGTTCCTCGACCTCCGCGGCTGCTGGGCCGTCGACGACAAGTTCC 466
consensus_8642#2      GGTGCCGCGACCTCCGGTTCCTCGACCTCCGCGGCTGCTGGGCCGTCGACGACAAGTTCC 489
                      ********** *************************************************

consensus_8642#0      TGCAGGAGAGGCACCCGGGGCTGAGGGTGCTCGGCCCCGGCGTCGACGACTGCTTCGAGA 1137
consensus_8642#1      TGCAGGAGAGGCACCCGGGGCTGAGGGTGCTCGGCCCCGGCGTCGACGACTGCTTCGAGA 526
consensus_8642#2      TGCAGGAGAGGCACCCGGGGCTGAGGGTGCTCGGCCCCGGCGTCGACGACTGCTTCGAGA 549
                      ************************************************************

consensus_8642#0      ACAGCTACCTGGAGGAGTGCTCCGACTACTCCGACGACTCCTCCATCTACTCGTGGGAGC 1197
consensus_8642#1      ACAGCTACCTGGAGGAGTGCTCCGACTACTCCGACGACTCCTCCATCTACTCGTGGGAGC 586
consensus_8642#2      ACAGCTACCTGGAGGAGTGCTCCGACTACTCCGACGACTCCTCCATCTACTCGTGGGAGC 609
                      ************************************************************

consensus_8642#0      TCATGGAGGACGACGACGACGACTACTACGCCGTCGGGAGCGACGACGAGGCCATTTGGG 1257
consensus_8642#1      TCATGGAGGACGACGACGACGGCTACTACGCCGTCGGGAGCGACGACGAGGCCATTTGGG 646
consensus_8642#2      TCATGGAGGACGACGACGACGACTACTACGCCGTCGGGAGCGACGACGAGGCCATTTGGG 669
                      ********************* **************************************

consensus_8642#0      ACGACGGCCAGGGCCTCGAGAACCTGGAGGTCAGGTTCTACGGCGGCGGCTTCAGCGAGA 1317
consensus_8642#1      ACGGCGGCCAGG-CCTCGAGAACCTGGAGGTCAGGTTCTACGGCGGCGGCTTCAGCGAGA 705
consensus_8642#2      ACGACGGCCAGGGCCTCGAGAACCTGGAGGTCAGGTTCTACGGCGGCGGCTTCAGCGAGA 729
                      *** ******** ***********************************************

consensus_8642#0      GCTATGCTGGCTTCGATTGGCCACCATCACCATGACCATGAGAGCAGCTCAGCTCAGCTC 1377
consensus_8642#1      GCTATGCTGGCTTCGATTGGCCACCATCACCATGACCATGAGAGCAGCTCAGCTCAGCTC 765
consensus_8642#2      GCTATGCTGGCTTCGATTGGCCACCATCACCATGACCATGAGAGCAGCTCAGCTCAGCTC 789
                      ************************************************************

consensus_8642#0      AGTCCCTGACCTCACTGTCCTTGCTCTTCCTCTCGAGCCGTGTACCTAAGCTTGCAGTTG 1437
consensus_8642#1      AGTCCCTGACCTCACTGTCCTTGCTCTTCCTCTCGAGCCGTGTACCTAAGCTTGCAGTTG 825
consensus_8642#2      AGTCCCTGACCTCACTGTCCTTGCTCTTCCTCTCGAGCCGTGTACCTAAGCTTGCAGTTG 849
                      ************************************************************

consensus_8642#0      CAGTCTCGCAGATGTGTTGTTGTACTCTGTGTGTGTGCGCGTGTGCCAGTGTGTCATCAG 1497
consensus_8642#1      CAGTCTCGCAGATGTGTTGTTGTACTCTGTGTGTGTGCGCGTGTGCCAGTGTGTCATCAG 885
consensus_8642#2      CAGTCTCGCAGATGTGTTGTTGT------------------------------------- 872
                      ***********************                                     

consensus_8642#0      CATCACTAGCTTGCAGTGCAGATATGTGTGAGTGAACTTCTACGGCTAGTTGTTACTACT 1557
consensus_8642#1      CATCACTAGCTTGCAGTGCAGATATGTGTGAGTGAACTTCTACGGCTAGTTGTTACTACT 945
consensus_8642#2      ------------------------------------------------------------
                                                                                  

consensus_8642#0      ACTACATCCAGATGTAAACTTTGGTGTTTACATGAAGAAGCAATGCAAATGCAATATGTG 1617
consensus_8642#1      ACTACATCCAGATGTAAACTTTGGTGTTTACATGAAGAAGCAATGCAAATGCA------- 998
consensus_8642#2      ------------------------------------------------------------
                                                                                  

consensus_8642#0      GTGAAAAAAAAAAA 1631
consensus_8642#1      --------------
consensus_8642#2      --------------
                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)