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Oryza sativa
cluster # 8653 cluster # 8653       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8653#0 length = 1446 sequences # 5  

consensusID : consensus_8653#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1446
fasta sequence
                              [AGCTTGCATTAGTTACCATTGGAGGAGGAAAGGAACTAGAGGAAAAGCTTGTGGGCTTTGTAGGTAAGACCAACTAGTGAGACCATCGTAAACCACATGTTCACCAAATGGATACAGAGCTACCGCGATCTTCCTCTCATGATTAACCAGTGGGCTAATGTCACAAGATGGGAAATGAGGACTAAGCCATTCATCAGAACTCTTGAATTTCTATGGCAAGAAGGTCATACAGCTCATGCCACCCTTGAAGAGGCAGAAAAGGAGGCAATGCAAATGATTGATGTATATACAAAATTTGCATACGAGCAAGCTGCAATCCCTGTTATTCCGGGTCGAAAATCAAGAGTGGAAACGTTTGCTGGTGCTAATCGGACCTACACTATAGAAGCTATGATGGGTGACAGGAAGGCTTTACAGGCTGGAACCAGCCACAACCTTGGACAGAACTTCTCCCGTGCCTTTGGAACACAGTTTATGGATGAAAATAGCCAAATCGAACATGTTTGGCAGACTTCTTGGGCTATTAGCACTCGGTTTGTTGGTGGGATCATCATGACCCATGGTGATGATGCTGGCTTAATGCTTCCGCCAAATATTGCACCCATCCAGGTGGTAATAGTGCCTATATGGAAAAAGGGAGATGAAAAGAGTGCTGTTATGGAAGCTGTGTCTTCAGTTCAAAACACACTCAAAGAAGCAGGAATTAGAGTCAAAGTGGATGACTCGGAGTTGCGGACACCAGGATGGAAGTTCAATTTTTACGAGATGAAGGGAGTTCCTATAAGACTAGAAATTGGTCCCCGTGATGTCACAAACAAAAGTGTTGTTATTTCTAGGCGAGATATCCCTGGAAAACAAGGAAAGGAGTTTGGAGTGTCTATGGATCCATCAATACTGGTGGACCATATAAAAGGTCGTCTAGTGGAAATCCAAGCATCCCTTCTACAGAAGGCCATTGCA-TTCCGTGATAGTAACATAGTTGATGTAAGCTCATAT-GGAGAACT-GAAGGAGGCCATT-GCCGA-GGGTAAATGGGCGAGAGGGCCATGGTCAGCTAGCGATGCTGATGAGCTGAAGGTGAAAGAAGAGACCAGCGCCACCATCAGATGCTTCCCGTTCGAGCAGCCAGAGGGCGCTAAGAAATGCTTCATGACTGGCAATCCAGCCGAGGAAGTTGCAATTTTTGCGAAGTCGTATTAGTTCATGCTTTCTCTAATAGTCTGGTTCCAAGGATCAAAGCATTTTTTTTCCAGCTATATTTTCTCCA-TTTCCCAGATTCTCTGGGATCTTTTCTGATCATAAATTACCCATTGAATGCTTGTGCTTCTGATATTTCTAGTGTAAATTAGCGATCGAGTAGTTAAATCTCTGTCCTGCTTGTCGTATTAGGACAAAACTCACAACACGGTGCAATTGTATAATCAAAGTTTTTTAAGGGAAGTTCACAGC]

[+] EMBL AK106594             [AGCTTGCATTAGTTACCATTGGAGGAGGAAAGGAACTAGAGGAAAAGCTTGTGGGCTTTGTAGGTAAGACCAACTAGTGAGACCATCGTAAACCACATGTTCACCAAATGGATACAGAGCTACCGCGATCTTCCTCTCATGATTAACCAGTGGGCTAATGTCACAAGATGGGAAATGAGGACTAAGCCATTCATCAGAACTCTTGAATTTCTATGGCAAGAAGGTCATACAGCTCATGCCACCCTTGAAGAGGCAGAAAAGGAGGCAATGCAAATGATTGATGTATATACAAAATTTGCATACGAGCAAGCTGCAATCCCTGTTATTCCGGGTCGAAAATCAAGAGTGGAAACGTTTGCTGGTGCTAATCGGACCTACACTATAGAAGCTATGATGGGTGACAGGAAGGCTTTACAGGCTGGAACCAGCCACAACCTTGGACAGAACTTCTCCCGTGCCTTTGGAACACAGTTTATGGATGAAAATAGCCAAATCGAACATGTTTGGCAGACTTCTTGGGCTATTAGCACTCGGTTTGTTGGTGGGATCATCATGACCCATGGTGATGATGCTGGCTTAATGCTTCCGCCAAATATTGCACCCATCCAGGTGGTAATAGTGCCTATATGGAAAAAGGGAGATGAAAAGAGTGCTGTTATGGAAGCTGTGTCTTCAGTTCAAAACACACTCAAAGAAGCAGGAATTAGAGTCAAAGTGGATGACTCGGAGTTGCGGACACCAGGATGGAAGTTCAATTTTTACGAGATGAAGGGAGTTCCTATAAGACTAGAAATTGGTCCCCGTGATGTCACAAACAAAAGTGTTGTTATTTCTAGGCGAGATATCCCTGGAAAACAAGGAAAGGAGTTTGGAGTGTCTATGGATCCATCAATACTGGTGGACCATATAAAAGGTCGTCTAGTGGAAATCCAAGCATCCCTTCTACAGAAGGCCATTGCA TTCCGTGATAGTAACATAGTTGATGTAAGCTCATAT GGAGAACT GAAGGAGGCCATT GCCGA GGGTAAATGGGCGAGAGGGCCATGGTCAGCTAGCGATGCTGATGAGCTGAAGGTGAAAGAAGAGACCAGCGCCACCATCAGATGCTTCCCGTTCGAGCAGCCAGAGGGCGCTAAGAAATGCTTCATGACTGGCAATCCAGCCGAGGAAGTTGCAATTTTTGCGAAGTCGTATTAGTTCATGCTTTCTCTAATAGTCTGGTTCCAAGGATCAAAGCATTTTTTTTCCAGCTATATTTTCTCCA TTTCCCAGATTCTCTGGGATCTTTTCTGATCATAAATTACCCATTGGATGCTTGTGCTTCTGATATTTCTAGTGTAAATTAGCGATCGAGTAGTTAAATCTCTGTCCTGCTTGTCGTATTAGGACAAAACTCACAACACGGTGCAATTGTATAATCAAAGT                     ]
[+] EMBL CA763952             [                                                                                                                                                    AGTGGGCTAATGTCACAAGATGGGAAATGAGGACTAAGCCATTCATCAGAACTCTTGAATTTCTATGGCAAGAAGGTCATACAGCTCATGCCACCCTTGAAGAGGCAGAAAAGGAGGCAATGCAAATGATTGATGTATATACAAAATTTGCATACGAGCAAGCTGCAATCCCTGTTATTCCGGGTCGAAAATCAAGAGTGGAAACGTTTGCTGGTGCTAATCGGACCTACACTATAGAAGCTATGATGGGTGACAGGAAGGCTTTACAGGCTGGAACCAGCCACAACCTTGGACAGAACCTCTCCCGTGCCTTTGGAACACAGTTTATGGATGAAAATAGCCAAATCGAACATGTTTGGCAGACTTCTTGGGCTATTAGCACTCGGTTTGTCGGTGGGATCATCATGACCCATGGTGATGATGCTGGCTTAATGCTTCCGCCAAATATTGCACCCATCCAGGTGGTAATAGTGCCTATATGGAAAAAGGGAGATGAAAAGAGTGCTGTTATGGAAGCTGTGTCTTCAGTTCAAAACACACTCAAAGAAGCAGGAATTAGAGTCAAATTGGATGACTCGGAGTTGCGGACACCAGGATGGAAGNTCAATTTTTACGAGATGAANGGAGTTCCTATAAGACTAGAAATTGGTCCCCGTGATGTCACAAACAAAAGTGNTGGTATTTCTAGGCGAGATATNCCTGGAAAACAAGGAAANGAGTTTGGAGTGNCTATGGATCCATCAATACTGGNGGACCATATAAAAGGTCGNCCAGNGGNAATNCAAGCATNCCTTNTACAGAAAGNCATTGCATTTCCGGGATAGTAACATAGTTGATGNAAGCTCATATGGGAGAACTGGAAGGAGGNCATTGGCCGAGGGGTNAATGG                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB679316             [                                                                                                                                                                                                                                                                                                                                                                                                          TGGGTCTTAAGAAGGCTTTACAGGCTGGAACCAGCCACAACCTTGGACAGAACTTCTCCCGTGCCTTTGGAACACAGTTTATGGATGAAAATAGCCAAATCGAACATGTTTGGCAGACTTCTTGGGCTATTAGCACTCGGTTTGTTGGTGGGATCATCATGACCCATGGTGATGATGCTGGCTTAATGCTTCCGCCAAATATTGCACCCATCCAGGTGGTAATAGTGCCTATATGGAAAAAGGGAGATGAAAAGAGTGCTGTTATGGAAGCTGTGTCTTCAGTTCAAAACACACTCAAAGAAGCAGGAATTACAGTCAAAGTGGATGACTCGGAGTTGCGGACACCAGGATGGAAGTTCAATTTTTACGAGATGAAGGGAGTTCCTATAAGACTAGAAATTGGTCCCCGTGATGTCACAAACAAAAGTGTTGTTATTTCTAGGCGAGATATCCCTGGAAAACAAGGAAAGGAGTTTGGAGTGTCTATGGATCCATCAATACTGGTGGACCATATAAAAGGTCGTCTAGTGGAAATCCAAGCATCCCTTCTACAGAAGGCCATTGCA TTCCGTGATAGTAACATAGTTGATGTAAGCTCATAT GGAGAACT GAAGGAGGCCATT GCCGA GGGTAAATGGGCGAGAGGGCCATGGTCAGCTAGCGATGCTGATGAGCTGAAGGTGAAAGAAGAGACCAGCGCCACCATCAGATGCTTCCCGTTCGAGCAGCCAGAGGGCGCTAAGAGATGCTTCATGACTGGCAATCCAGCCGAGGAAAGTGCAATTTTTGCGAAGTCGTATTAGTTCA                                                                                                                                                                                                                                                      ]
[-] EMBL CB679317             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAATTTTTACGAGATGAAGGGAGTTCCTATAAGACTAGAAATTGGTCCCCGTGATGTCACAAACAAAAGTGTTGTTATTTCTAGGCGAGATATCCCTGGAAAACAAGGAAAGGAGTTTGGAGTGTCTATGGATCCATCAATACTGGTGGACCATATAAAAGGTCGTTTAGTGGAAATCCAAGCATCCCTTTTACAGAAGGCCATTGCA TTCCGTGATAGTAACATAGTTGATGTAAGCTCATAT GGAGAACT GAAGGAGGCCATT GCCGA GGGTAAATGGGCGAGAGGGCCATGGTCAGCTAGCGATGCTGATGAGCTGAAGGTGAAAGAAGAGACCAGCGCCCCCATCAGATGCTTCCCGTTCGAGCAGCCAGAGGGCGCTAAGAAATGCTTCATGACTGGCAATCCAGCCGAGGAAGTTGCAATTTTTGCGAAGTCGTATTAGTTCATGCTTTCTCTAATAGTCTGGTTCCAAGGATCAAAGCATTTTTTTTCCAGCTATATTTTCTCCATTTTCCCAGATTTTTTGGGATCTTTTCTGATCATAAATTACCCATTGAATGCTTGTGCTTCTGATATTTTTAGTGTAAATTAGCGATCGAGTAGTTAAATCTCTGTCCTGCTTGTCGTATTAGGACAAAACTCACAACACGGTGCAATTGTATAATCAAAGTTTTTTAAGGGAAGTTC     ]
[+] EMBL CB681062             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAAAGCCTTGTTATTTCTAGGCGAGATATCCCTGGAAAACAAGGAAAGGAGTTTGGAGTGTCTATGGATCCATCAATACTGGTGGACCATATAAAAGGTCGTCTAGTGGAAATCCAAGCATCCCTTCTACAGAAGGCCATTGCA TTCCGTGATAGTAACATAGTTGATGTAAGCTCATAT GGAGAACT GAAGGAGGCCATT GCCGA GGGTAAATGGGCGAGAGGGCCATGGTCAGCTAGCGATGCTGATGAGCTGAAGGTGAAAGAAGAGACCAGCGCCACCATCAGATGCTTCCCGTTCGAGCAGCCAGAGGGCGCTAAGAAATGCTTCATGACTGGCAATCCAGCCGAGGAAGTTGCAATTTTTGCGAAGTCGTATTAGTTCATGCTTTCTCTAATAGTCTGGTTCCAAGGATCAAAGCATTTTTTTTCCAGCTATATTTTCTCCATTTTCCCAGATTCTCTGGGATCTTTTCTGATCATAAATTACCCATTGAATGCTTGTGCTTCTGATATTTCTAGTGTAAATTAGCGATCGAGTAGTTAAATCTCTGTCCTGCTTGTCGTATTAGGACAAAACTCACAACACGGTGCAATTGTATAATCAAAGTTCTCTTACTGAAGTTCACAGC]


>consensus_8653#0 AGCTTGCATTAGTTACCATTGGAGGAGGAAAGGAACTAGAGGAAAAGCTTGTGGGCTTTG TAGGTAAGACCAACTAGTGAGACCATCGTAAACCACATGTTCACCAAATGGATACAGAGC TACCGCGATCTTCCTCTCATGATTAACCAGTGGGCTAATGTCACAAGATGGGAAATGAGG ACTAAGCCATTCATCAGAACTCTTGAATTTCTATGGCAAGAAGGTCATACAGCTCATGCC ACCCTTGAAGAGGCAGAAAAGGAGGCAATGCAAATGATTGATGTATATACAAAATTTGCA TACGAGCAAGCTGCAATCCCTGTTATTCCGGGTCGAAAATCAAGAGTGGAAACGTTTGCT GGTGCTAATCGGACCTACACTATAGAAGCTATGATGGGTGACAGGAAGGCTTTACAGGCT GGAACCAGCCACAACCTTGGACAGAACTTCTCCCGTGCCTTTGGAACACAGTTTATGGAT GAAAATAGCCAAATCGAACATGTTTGGCAGACTTCTTGGGCTATTAGCACTCGGTTTGTT GGTGGGATCATCATGACCCATGGTGATGATGCTGGCTTAATGCTTCCGCCAAATATTGCA CCCATCCAGGTGGTAATAGTGCCTATATGGAAAAAGGGAGATGAAAAGAGTGCTGTTATG GAAGCTGTGTCTTCAGTTCAAAACACACTCAAAGAAGCAGGAATTAGAGTCAAAGTGGAT GACTCGGAGTTGCGGACACCAGGATGGAAGTTCAATTTTTACGAGATGAAGGGAGTTCCT ATAAGACTAGAAATTGGTCCCCGTGATGTCACAAACAAAAGTGTTGTTATTTCTAGGCGA GATATCCCTGGAAAACAAGGAAAGGAGTTTGGAGTGTCTATGGATCCATCAATACTGGTG GACCATATAAAAGGTCGTCTAGTGGAAATCCAAGCATCCCTTCTACAGAAGGCCATTGCA TTCCGTGATAGTAACATAGTTGATGTAAGCTCATATGGAGAACTGAAGGAGGCCATTGCC GAGGGTAAATGGGCGAGAGGGCCATGGTCAGCTAGCGATGCTGATGAGCTGAAGGTGAAA GAAGAGACCAGCGCCACCATCAGATGCTTCCCGTTCGAGCAGCCAGAGGGCGCTAAGAAA TGCTTCATGACTGGCAATCCAGCCGAGGAAGTTGCAATTTTTGCGAAGTCGTATTAGTTC ATGCTTTCTCTAATAGTCTGGTTCCAAGGATCAAAGCATTTTTTTTCCAGCTATATTTTC TCCATTTCCCAGATTCTCTGGGATCTTTTCTGATCATAAATTACCCATTGAATGCTTGTG CTTCTGATATTTCTAGTGTAAATTAGCGATCGAGTAGTTAAATCTCTGTCCTGCTTGTCG TATTAGGACAAAACTCACAACACGGTGCAATTGTATAATCAAAGTTTTTTAAGGGAAGTT CACAGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)