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Oryza sativa
cluster # 8654 cluster # 8654       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8654#0 length = 1927 sequences # 5  

consensusID : consensus_8654#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1927
fasta sequence
                              [TGATCACTCCGCACCCCCCTCAACTCTCTCTATCGATCGATCGATCGATCTGTGCCTCCATCCCCGATGCCCCCATCAAGATCTCATCATCAGGATCATCTCCCTGCCGCCGCCGCCGAGTGAAATCAACTAGTGTATGCCTCTCACTGTGGCTGAGATCAAGTGACCGAGGAAGAAGACGAAGGAGACGGCGGCCGGCGGTGTAAAGCTGTATAGCTAGCTCTCTAGCTCTGCGTGTGCTCGGTCCCCGCGCCGCAGTGCTGTGCCTGTGCCTGTGCCTGTGCGCTATCTAGCTGTGGAGATGGAGGCGCGGCTGCGGCTGCTCGTCGTCGTCGTCGTTGTTGCCGGGCACTGCGCCGCCGTCGCGTCCGCCGCCGGTAACTCGTCGGTGGTGGGGTACCACGGGGACCCGACGTTCAACGTCAGGAACTACGGCGCTAAGGGGAACGGCCAAACCGACGACAGCAAGGCGCTGATGACGGCGTGGAAGGCGGCGTGCGCGGCGACCGGGGCGGTGACGCTGGTGCTCCCGCCGGGGACCTACTACATCGGGCCGGTGCAGTTCCATGGCCCCTGCAGCAAGGCCACCACCATGACCTTCCTCATGCAGGGGACGCTCAAGGCGGCGACCGACCTGAAGAGGTTCGGCAACGACTGGGTCGAGTTCGGGTGGGTGAACCACCTCATCGTCTCCGGCCAGAACGGCGCCGCCTTCGACGGCCAGGGCGCCGCCTCCTGGCCCTTCAACAAGTGCCCCATCCGCAAGGACTGCAAAGTCCTCCCCACCAGCGTGCTGTTCGTGAACAACAAAAACATGGTGGTGCAGAACGTGGCGTCGGTGAACAGCAAGTTCTTCCACATGGCGCTGCTGCAGTGCAGCGGGGCGAAGATCAGCGGGGTGAAGATCAGCGCGCCGGAGAGCAGCCCGAACACGGACGGCATCCACATCGAGCGGAGCAACGGGGTGTCCATCGCGGACACCACCATCGCGACGGGCGACGACTGCATCTCCATCGGGCAGGGGAACGACAACATCGACGTGGCGCGCGTCCACTGCGGGCCGGGGCACGGCATGAGCGTGGGCAGCCTCGGCCGGTACGTCGGCGAGGGGGACGTCACGCGGATCCACGTCCGCGACATGACCTTCCACGGCACCATGAACGGCGTCCGCATCAAGACGTGGGAGAACTCCCCCACCAAGAGCAACGCCGCCCACATGCTGTTCGAGAACCTCGTCATGAACGACGTCCAGAACCCCATCATCATCGACCAGAAGTACTGCCCCTACTACAACTGCGAGCACAAGTTCGTGTCCGGGGTGACGATCAAGGACGTGCAGTTCAAGAACATCAAGGGGACGGCGACGACGCAGGTGGCGGTGCTGCTCAAGTGCGGGGTGCCGTGCCAGGGCGTCGTGCTGCAGGACGTCGACCTGCGGTACAAGGGGAACGGCGTCTCGTCGTCCAAGTGCGAGAACGTCAGGGCCAAGTACGCCGGCTTCCAGAACCCCAAGCCGTGCCCGTAGCCCCATGACGACGATCTGTGACGAGATCGTTAATTTTTTGCATGCTGTCTTGGCAAGCATGCACCTAGCAAGCAACAAAGACACTAGCTTAGCTAGCTCCGATTAATGTGTCGTGCACTGAGCTTAATTAATTTGTGATTCTTTTCTTTTCCCTTTATGCTACTTAGACGATTTTCTTTTCTTTTCTCCTTCATGTACGTTTCTTAGACGATTTTGTTGCTTTGA-TTTTTTTTCCCCTCTCCCTTGACGCTTAATTATAGTGGATTCTGTACGTGGTATAAGTGAGCTGCCGATTACTGGCATTAGTTTCTGAATCACTCAACTTGTGAATACCCCAATGTCATGCTTAATTAATTGGAACAAAGACTAAACTGTCTCAAAAGCCGTCTGGTTCGATCCATC]

[+] EMBL AK069803             [TGATCACTCCGCACCCCCCTCAACTCTCTCTATCGATCGATCGATCGATCTGTGCCTCCATCCCCGATGCCCCCATCAAGATCTCATCATCAGGATCATCTCCCTGCCGCCGCCGCCGAGTGAAATCAACTAGTGTATGCCTCTCACTGTGGCTGAGATCAAGTGACCGAGGAAGAAGACGAAGGAGACGGCGGCCGGCGGTGTAAAGCTGTATAGCTAGCTCTCTAGCTCTGCGTGTGCTCGGTCCCCGCGCCGCAGTGCTGTGCCTGTGCCTGTGCCTGTGCGCTATCTAGCTGTGGAGATGGAGGCGCGGCTGCGGCTGCTCGTCGTCGTCGTCGTTGTTGCCGGGCACTGCGCCGCCGTCGCGTCCGCCGCCGGTAACTCGTCGGTGGTGGGGTACCACGGGGACCCGACGTTCAACGTCAGGAACTACGGCGCTAAGGGGAACGGCCAAACCGACGACAGCAAGGCGCTGATGACGGCGTGGAAGGCGGCGTGCGCGGCGACCGGGGCGGTGACGCTGGTGCTCCCGCCGGGGACCTACTACATCGGGCCGGTGCAGTTCCATGGCCCCTGCAGCAAGGCCACCACCATGACCTTCCTCATGCAGGGGACGCTCAAGGCGGCGACCGACCTGAAGAGGTTCGGCAACGACTGGGTCGAGTTCGGGTGGGTGAACCACCTCATCGTCTCCGGCCAGAACGGCGCCGCCTTCGACGGCCAGGGCGCCGCCTCCTGGCCCTTCAACAAGTGCCCCATCCGCAAGGACTGCAAAGTCCTCCCCACCAGCGTGCTGTTCGTGAACAACAAAAACATGGTGGTGCAGAACGTGGCGTCGGTGAACAGCAAGTTCTTCCACATGGCGCTGCTGCAGTGCAGCGGGGCGAAGATCAGCGGGGTGAAGATCAGCGCGCCGGAGAGCAGCCCGAACACGGACGGCATCCACATCGAGCGGAGCAACGGGGTGTCCATCGCGGACACCACCATCGCGACGGGCGACGACTGCATCTCCATCGGGCAGGGGAACGACAACATCGACGTGGCGCGCGTCCACTGCGGGCCGGGGCACGGCATGAGCGTGGGCAGCCTCGGCCGGTACGTCGGCGAGGGGGACGTCACGCGGATCCACGTCCGCGACATGACCTTCCACGGCACCATGAACGGCGTCCGCATCAAGACGTGGGAGAACTCCCCCACCAAGAGCAACGCCGCCCACATGCTGTTCGAGAACCTCGTCATGAACGACGTCCAGAACCCCATCATCATCGACCAGAAGTACTGCCCCTACTACAACTGCGAGCACAAGTTCGTGTCCGGGGTGACGATCAAGGACGTGCAGTTCAAGAACATCAAGGGGACGGCGACGACGCAGGTGGCGGTGCTGCTCAAGTGCGGGGTGCCGTGCCAGGGCGTCGTGCTGCAGGACGTCGACCTGCGGTACAAGGGGAACGGCGTCTCGTCGTCCAAGTGCGAGAACGTCAGGGCCAAGTACGCCGGCTTCCAGAACCCCAAGCCGTGCCCGTAGCCCCATGACGACGATCTGTGACGAGATCGTTAATTTTTTGCATGCTGTCTTGGCAAGCATGCACCTAGCAAGCAACAAAGACACTAGCTTAGCTAGCTCCGATTAATGTGTCGTGCACTGAGCTTAATTAATTTGTGATTCTTTTCTTTTCCCTTTATGCTACTTAGACGATTTTCTTTTCTTTTCTCCTTCATGTACGTTTCTTAGACGATTTTGTTGCTTTGA TTTTTTTTCCCCTCTCCCTTGACGCTTAATTATAGTGGATTCTGTACGTGGTATAAGTGAGCTGCCGATTACTGGCATTAGTTTCTGAATCACTCAACTTGTGAATACCCCAATGTCATGCTTAATTAATTGGAACAAAGACTAAACTGTCTCAAAAGCCGTCTGGTTCGATCCATC]
[+] EMBL AU172573             [               CCCCTCAACTCTCTCTATCGATCGATCGATCGATCTGTGCCTCCATCCCCGATGCCCCCATCAAGATCTCATCATCAGGATCATCTCCCTGCCGCCGCCGCCGAGTGAAATCAACTAGTGTATGCCTCTCACTGTGGCTGAGATCAAGTGACCGAGGAAGAAGACGAAGGAGACGGCGGCCGGCGGTGTAAAGCTGTATAGCTAGCTCTCTAGCTCTGCGTGTGCTCGGTCCCCGCGCCGCAGTGCTGTGCCTGTGCCTGTGCCTGTGCGCTATCTAGCTGTGGAGATGGAGGCGCGGCTGCGGCTGCTCGTCGTCGTCGTCGTTGTTGCCGGGCACTGCGCCGCCGTCGCGTCCGCCGCCGGTAACTCGTCGGTGGTGGGGTACCACGGGGACCCGACGTTCAACGTCAGGAACTACGGCGCTAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL C72153               [                   TCAACTCTCTCTATCGATCGATCGATCGATCTGTGCCTCCATCCCCGATGCCCCCATCAAGATCTCATCATCAGGATCATCTCCCTGCCGCCGCCGCCGAGTGAAATCAACTAGTGTATGCCTCTCACTGTGGCTGAGATCAAGTGACCGAGGAAGAAGACGAAGGAGACGGCGGCCGGCGGTGTAAAGCTGTATAG TAGCTCTCTAGCTCTGCGTGTGCTCGGTCCCCGCGCCGCAGTGCTGTGCCTGTGCCTGTGCCTGTGCGCTATCTAGCTGTGGAGATGGAGGCGCGGCTGCGGCTGCTCGTCGTCGTCGTCGTTGTTGCCGGGNACTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU225570             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 gccgctCGCAGGTGGCGGTGCTGCTCAAGTGCGGGGTGCCGTGCCAGGGCGTCGTGCTGCAGGACGTCGACCTGCGGTACAAGGGGAACGGCGTCTCGTCGTCCAAGTGCGAGAACGTCAGGGCCAAGTACGCCGGCTTCCAGAACCCCAAGCCGTGCCCGTAGCCCCATGACGACGATCTGTGACGAGATCGTTAATTTTTTGCATGCTGTCTTGGCAAGCATGCACCTAGCAAGCAACAAAGACACTAGCTTAGCTAGCTCCGATTAATGTGTCGTGCACTGAGCTTAATTAATTTGTGATTCTTTTCTTTTCCCTTTATGCTACTTAGACGATTTTCTTTTCTTTTCTCCTTCATGTACGTTTCTTAGACGATTTTG                                                                                                                                                                                           ]
[+] EMBL AU172574             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGTGCTGCAGGACGTCGACCTGCGGTACAAGGGGAACGGCGTCTCGTCGTCCAAGTGCGAGAACGTCAGGGCCAAGTACGCCGGCTTCCAGAACCCCAANCCGTGCCCGTAGCCCCATGACGACGATCTGTGACGAGATCGTTAATTTTTTGCATGCTGTCTTGGCAAGCATGCACCTAGCAAGCAACAAAGACACTAGCTTAGCTAGCTCCGATTAATGTGTCGTGCACTGAGCTTAATTAATTTGTGATTCTTTTCTTTTCCCTTTATGCTACTTAGACGATTTTCTTTTCTTTTCTCCTTCATGTACGTTTCTTAGACGATTTTGTTGCTTTGATTTTTTTTTCCCCTCTCCCTTGACGCTTAATTATAGTGGATTCTGTACGTGGTATAAGTGAGCTGCCGATTACTGGCATTAGTTTCTGAATCAaaaa                                                                                 ]


>consensus_8654#0 TGATCACTCCGCACCCCCCTCAACTCTCTCTATCGATCGATCGATCGATCTGTGCCTCCA TCCCCGATGCCCCCATCAAGATCTCATCATCAGGATCATCTCCCTGCCGCCGCCGCCGAG TGAAATCAACTAGTGTATGCCTCTCACTGTGGCTGAGATCAAGTGACCGAGGAAGAAGAC GAAGGAGACGGCGGCCGGCGGTGTAAAGCTGTATAGCTAGCTCTCTAGCTCTGCGTGTGC TCGGTCCCCGCGCCGCAGTGCTGTGCCTGTGCCTGTGCCTGTGCGCTATCTAGCTGTGGA GATGGAGGCGCGGCTGCGGCTGCTCGTCGTCGTCGTCGTTGTTGCCGGGCACTGCGCCGC CGTCGCGTCCGCCGCCGGTAACTCGTCGGTGGTGGGGTACCACGGGGACCCGACGTTCAA CGTCAGGAACTACGGCGCTAAGGGGAACGGCCAAACCGACGACAGCAAGGCGCTGATGAC GGCGTGGAAGGCGGCGTGCGCGGCGACCGGGGCGGTGACGCTGGTGCTCCCGCCGGGGAC CTACTACATCGGGCCGGTGCAGTTCCATGGCCCCTGCAGCAAGGCCACCACCATGACCTT CCTCATGCAGGGGACGCTCAAGGCGGCGACCGACCTGAAGAGGTTCGGCAACGACTGGGT CGAGTTCGGGTGGGTGAACCACCTCATCGTCTCCGGCCAGAACGGCGCCGCCTTCGACGG CCAGGGCGCCGCCTCCTGGCCCTTCAACAAGTGCCCCATCCGCAAGGACTGCAAAGTCCT CCCCACCAGCGTGCTGTTCGTGAACAACAAAAACATGGTGGTGCAGAACGTGGCGTCGGT GAACAGCAAGTTCTTCCACATGGCGCTGCTGCAGTGCAGCGGGGCGAAGATCAGCGGGGT GAAGATCAGCGCGCCGGAGAGCAGCCCGAACACGGACGGCATCCACATCGAGCGGAGCAA CGGGGTGTCCATCGCGGACACCACCATCGCGACGGGCGACGACTGCATCTCCATCGGGCA GGGGAACGACAACATCGACGTGGCGCGCGTCCACTGCGGGCCGGGGCACGGCATGAGCGT GGGCAGCCTCGGCCGGTACGTCGGCGAGGGGGACGTCACGCGGATCCACGTCCGCGACAT GACCTTCCACGGCACCATGAACGGCGTCCGCATCAAGACGTGGGAGAACTCCCCCACCAA GAGCAACGCCGCCCACATGCTGTTCGAGAACCTCGTCATGAACGACGTCCAGAACCCCAT CATCATCGACCAGAAGTACTGCCCCTACTACAACTGCGAGCACAAGTTCGTGTCCGGGGT GACGATCAAGGACGTGCAGTTCAAGAACATCAAGGGGACGGCGACGACGCAGGTGGCGGT GCTGCTCAAGTGCGGGGTGCCGTGCCAGGGCGTCGTGCTGCAGGACGTCGACCTGCGGTA CAAGGGGAACGGCGTCTCGTCGTCCAAGTGCGAGAACGTCAGGGCCAAGTACGCCGGCTT CCAGAACCCCAAGCCGTGCCCGTAGCCCCATGACGACGATCTGTGACGAGATCGTTAATT TTTTGCATGCTGTCTTGGCAAGCATGCACCTAGCAAGCAACAAAGACACTAGCTTAGCTA GCTCCGATTAATGTGTCGTGCACTGAGCTTAATTAATTTGTGATTCTTTTCTTTTCCCTT TATGCTACTTAGACGATTTTCTTTTCTTTTCTCCTTCATGTACGTTTCTTAGACGATTTT GTTGCTTTGATTTTTTTTCCCCTCTCCCTTGACGCTTAATTATAGTGGATTCTGTACGTG GTATAAGTGAGCTGCCGATTACTGGCATTAGTTTCTGAATCACTCAACTTGTGAATACCC CAATGTCATGCTTAATTAATTGGAACAAAGACTAAACTGTCTCAAAAGCCGTCTGGTTCG ATCCATC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)