These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8679#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1753 fasta sequence [AAGCTTCAGTTTTCAGTGCCATCTTGCGTTGCATCTCCTCCTCGCTTTGCCGCTTGTTTCGCCAAGTATAAAGCCTGGTCCAGTGACCCTTTTTGTTTCGATGTGCAGGGTCAAAACAAACACACACACACACATCTGTCTCTTCTTCAGGTTTCAGGTCTCCTGGCTGCTTTGCTTCTGCTGCCTCTGTGTGGGGCTCCAGCCTTGCTCAGATTGATGATTGGTGATCCAACCATCTTCATCACTTACAGAGATGGGGTGTGGTGCATCAATCCCTAAGAAATGCAAGGTAGGAGGGAAGGGGAAGAAGCGCCGGAGCGTCATACAGGAGGTTGCCATATTCGTGCCGACAATTCGCATTCCGGTGGACAGTGATGTTGCCCATCCACTCAGAGGACTAGTATCCAAGGAGCTCGTCGACCGCCTCTCAAAGTTCAGAGACCGCGTTGTCGCGCTCTCTGAAGATATCTATTGCGCGGATGTTTCGGATGTTTCAGAGTTACAGCATGCCCTTGAGGAGTACTTGCCAGTTGTTCTTGGTTTAACAATGAAAGAAAGCCGTCTTGAATCATCGGTGGAATTCAGATGGAGGACCTTGGATGATGACGAAGAGTGTTGTCTTTCAAGTGCATGGTATGAAGTTCTGTCAGTCATCCACATGATGGCGATGCTTGCATTGTTTGAAGCCAACCTGATACTTATTCCGAAGAACGGTCAAGTTGGAGGTGAAAGGAAGGTATCAGAAGATGCAAAGAAGGATGTCGTCGATTCGTTGCTCAGAGCATCAGGATGTTTAGATTACTGCGTGCACCGTATACTTGTACAGATGCCGGCACAAGTCAAGAAAAGTTTTCCTAGTTATTTTCAGGAAGGTATGCTTGAGGCCATTTCAATTCAAGCATTGGCTCAGTGTGTAGAAATACAACTTGGATTGGCTTCAGAGTGTGAGAAGGCAACTCTGTCAGTAAAGAGGAGGCTAGCCTGTGAGCTAGTCAGTTATTTCTCACAGGCTCACTATTGCTTATCGGGATGCGACACGAGCGACTCGTTTGGGAAGAAGCTCCTGCTGTTTCTGAAGTGGAAATGCATGGAAGCCAAGGCAGTAGCATACTACTACCATGGCCTTGTGCTTGACAAAGGCAATGAAGCCAGCAGCCACATCAGTGCAGTGTGCTGCCTCTCTGCAGCTGATGAT-CTAGTTGCAGATAG-CAAGAGGGCTTGTTTGAGCTTCTGCTTGGCAAACCCCATCACAAGGGTACCTCCTCCTTGGGGTATCATGAGGAATATGCACAAG-AAAATCCCAGATTCTGCGTGCAAGAGATTCCAAATGTATGGATATCTTTTTGAACAAGACAATAACAGTGCACTTCAATCCTTACCAGATCTACCAGAATTT-GCGCTGTCGCTGAGACCCGAAGGGTATGAACTGCCTAGCACTGATTCAATCTGGGATAATGTTGATAGCCAGCCTCAGATTCAGAGCCTCAAGGAGCATCTGGATGATGAAGACGAAGTGGAAACAAAATGATACTTCAGACATCCAAAACGCTTCATTTCATTGTGCCATGAAAAGTAGCATTAGTACTAGCAAAGACATCGGAATGCTCAATTCAGAAGTGTTTGGATTCAGCATATGGCATTGAGCCAAAAAGAAATCAGAATATGTACCTTCTGTGTAGTTGAAAGTATCTATCACTGATTATAAACAGAATCAACAATAATAGGAAAGAAGGGTGTTTCTTAAAAAAAAAAN] [+] EMBL AU031015 [AAGCTTCAGTTTTCAGTGCCATCTTGCGTTGCATCTCCTCCTCGCTTTGCCGCTTGTTTCGCCAAGTATAAAGCCTGGTCCAGTGACCCTTTTTGTTTCGATGTGCAGGGTCAAAACAAACACACACACACACATCTGTCTCTTCTTCAGGTTTCAGGTCTCCTGGCTGCTTTGCTTCTGCTGCCTCTGTGTGGGGCTCCAGCCTTGCTCAGATTGATGATTGGTGATCCAACCATCTTCATCACTTACAGAGATGGGGTGTGGTGCATCAATCCCTAAGAAATGCAAGGTAGGANGGAAGGGGAAGAAGCGNCGGAGCGTC ] [+] EMBL AK064017 [ GGTCAAAACAAACACACACACACACATCTGTCTCTTCTTCAGGTTTCAGGTCTCCTGGCTGCTTTGCTTCTGCTGCCTCTGTGTGGGGCTCCAGCCTTGCTCAGATTGATGATTGGTGATCCAACCATCTTCATCACTTACAGAGATGGGGTGTGGTGCATCAATCCCTAAGAAATGCAAGGTAGGAGGGAAGGGGAAGAAGCGCCGGAGCGTCATACAGGAGGTTGCCATATTCGTGCCGACAATTCGCATTCCGGTGGACAGTGATGTTGCCCATCCACTCAGAGGACTAGTATCCAAGGAGCTCGTCGACCGCCTCTCAAAGTTCAGAGACCGCGTTGTCGCGCTCTCTGAAGATATCTATTGCGCGGATGTTTCGGATGTTTCAGAGTTACAGCATGCCCTTGAGGAGTACTTGCCAGTTGTTCTTGGTTTAACAATGAAAGAAAGCCGTCTTGAATCATCGGTGGAATTCAGATGGAGGACCTTGGATGATGACGAAGAGTGTTGTCTTTCAAGTGCATGGTATGAAGTTCTGTCAGTCATCCACATGATGGCGATGCTTGCATTGTTTGAAGCCAACCTGATACTTATTCCGAAGAACGGTCAAGTTGGAGGTGAAAGGAAGGTATCAGAAGATGCAAAGAAGGATGTCGTCGATTCGTTGCTCAGAGCATCAGGATGTTTAGATTACTGCGTGCACCGTATACTTGTACAGATGCCGGCACAAGTCAAGAAAAGTTTTCCTAGTTATTTTCAGGAAGGTATGCTTGAGGCCATTTCAATTCAAGCATTGGCTCAGTGTGTAGAAATACAACTTGGATTGGCTTCAGAGTGTGAGAAGGCAACTCTGTCAGTAAAGAGGAGGCTAGCCTGTGAGCTAGTCAGTTATTTCTCACAGGCTCACTATTGCTTATCGGGATGCGACACGAGCGACTCGTTTGGGAAGAAGCTCCTGCTGTTTCTGAAGTGGAAATGCATGGAAGCCAAGGCAGTAGCATACTACTACCATGGCCTTGTGCTTGACAAAGGCAATGAAGCCAGCAGCCACATCAGTGCAGTGTGCTGCCTCTCTGCAGCTGATGAT CTAGTTGCAGATAG CAAGAGGGCTTGTTTGAGCTTCTGCTTGGCAAACCCCATCACAAGGGTACCTCCTCCTTGGGGTATCATGAGGAATATGCACAAG AAAATCCCAGATTCTGCGTGCAAGAGATTCCAAATGTATGGATATCTTTTTGAACAAGACAATAACAGTGCACTTCAATCCTTACCAGATCTACCAGAATTT GCGCTGTCGCTGAGACCCGAAGGGTATGAACTGCCTAGCACTGATTCAATCTGGGATAATGTTGATAGCCAGCCTCAGATTCAGAGCCTCAAGGAGCATCTGGATGATGAAGACGAAGTGGAAACAAAATGATACTTCAGACATCCAAAACGCTTCATTTCATTGTGCCATGAAAAGTAGCATTAGTACTAGCAAAGACATCGGAATGCTCAATTCAGAAGTGTTTGGATTCAGCATATGGCATTGAGCCAAAAAGAAATCAGAATATGTACCTTCTGTGTAGTTGAAAGTATCTATCACTGATTATAAACAGAATCAACAATAATAGGAAAGAAGGGTGTTT ] [+] EMBL AK099379 [ AAAACAAACACACACACACACATCTGTCTCTTCTTCAGGTTTCAGGTCTCCTGGCTGCTTTGCTTCTGCTGCCTCTGTGTGGGGCTCCAGCCTTGCTCAGATTGATGATTGGTGATCCAACCATCTTCATCACTTACAGAGATGGGGTGTGGTGCATCAATCCCTAAGAAATGCAAGGTAGGAGGGAAGGGGAAGAAGCGCCGGAGCGTCATACAGGAGGTTGCCATATTCGTGCCGACAATTCGCATTCCGGTGGACAGTGATGTTGCCCATCCACTCAGAGGACTAGTATCCAAGGAGCTCGTCGACCGCCTCTCAAAGTTCAGAGACCGCGTTGTCGCGCTCTCTGAAGATATCTATTGCGCGGATGTTTCGGATGTTTCAGAGTTACAGCATGCCCTTGAGGAGTACTTGCCAGTTGTTCTTGGTTTAACAATGAAAGAAAGCCGTCTTGAATCATCGGTGGAATTCAGATGGAGGACCTTGGATGATGACGAAGAGTGTTGTCTTTCAAGTGCATGGTATGAAGTTCTGTCAGTCATCCACATGATGGCGATGCTTGCATTGTTTGAAGCCAACCTGATACTTATTCCGAAGAACGGTCAAGTTGGAGGTGAAAGGAAGGTATCAGAAGATGCAAAGAAGGATGTCGTCGATTCGTTGCTCAGAGCATCAGGATGTTTAGATTACTGCGTGCACCGTATACTTGTACAGATGCCGGCACAAGTCAAGAAAAGTTTTCCTAGTTATTTTCAGGAAGGTATGCTTGAGGCCATTTCAATTCAAGCATTGGCTCAGTGTGTAGAAATACAACTTGGATTGGCTTCAGAGTGTGAGAAGGCAACTCTGTCAGTAAAGAGGAGGCTAGCCTGTGAGCTAGTCAGTTATTTCTCACAGGCTCACTATTGCTTATCGGGATGCGACACGAGCGACTCGTTTGGGAAGAAGCTCCTGCTGTTTCTGAAGTGGAAATGCATGGAAGCCAAGGCAGTAGCATACTACTACCATGGCCTTGTGCTTGACAAAGGCAATGAAGCCAGCAGCCACATCAGTGCAGTGTGCTGCCTCTCTGCAGCTGATGAT CTAGTTGCAGATAG CAAGAGGGCTTGTTTGAGCTTCTGCTTGGCAAACCCCATCACAAGGGTACCTCCTCCTTGGGGTATCATGAGGAATATGCACAAG AAAATCCCAGATTCTGCGTGCAAGAGATTCCAAATGTATGGATATCTTTTTGAACAAGACAATAACAGTGCACTTCAATCCTTACCAGATCTACCAGAATTT GCGCTGTCGCTGAGACCCGAAGGGTATGAACTGCCTAGCACTGATTCAATCTGGGATAATGTTGATAGCCAGCCTCAGATTCAGAGCCTCAAGGAGCATCTGGATGATGAAGACGAAGTGGAAACAAAATGATACTTCAGACATCCAAAACGCTTCATTTCATTGTGCCATGAAAAGTAGCATTAGTACTAGCAAAGACATCGGAATGCTCAATTCAGAAGTGTTTGGATTCAGCATATGGCATTGAGCCAAAAAGAAATCAGAATATGTACCTTCTGTGTAGTTGAAAGTATCTATCACTGATTATAAACAGAATCAA ] [+] EMBL AU031016 [ cnGCTGATGATNCTAGTTGCAGATNGCCAAGAGGGCTTGTTTGAGCTTCTGCTTGGCAAACCCCATCACAAGGGTACCTCCTCCTTGGGGTATCATGAGGAATATGCACAAGAAAAATCCCAGATTCTGCGTGCAAGAGATNCCAAATGTATGGATATCTTTTTGAACAAGACAATAACAGTGCACTTCAATCCTTACCAGATCTACCAGAATTTNGC CTGTCGCTGAGACCCGAAGGGTATGAACTGCCTAGCACTGATTCAATCTGGGATAATGTTGATAGCCAGCCTCAGATTCAGAGCCTCAAGGAGCATCTGGATGATGAAGACGAAGTGGAAACAAAATGATACTTCAGACATCCAAAACGCTTCATTTCATTGTGCCATGAAAAGTAGCATTAGTACTAGCAAAGACATCGGAATGCTCAATTCAGAAGTGTTTGGATTCAGCATATGGCATTGAGCCAAAAAGAAATCAGAATATGTACCTTCTGTGTAGTTGAAAGTATCTATCACTGATTATAAACAGAATCAACAATAATAGGAAAGAAGGGTGTTTCTTAAAAAAAAAAN] [+] EMBL BE607400 [ AGCACTGATTCAATCTGGGATAATGTTGATAGCCAGCCTCAGATTCAGAGCCTCAAGGAGCATCTGGATGATGAAGACGAAGTGGAAACAAAATGATACTTCAGACATCCAAAACGCTTCATTTCATTGTGCCATGAAAAGTAGCATTAGTACTAGCAAAGACATCGGAATGCTCAATTCAGAAGTGTTTGGATTCAGCATATGGCATTGAGCCAAAAAGAAATCAGAATATGTACCTTCTGTGTAGTTGAAAGTATCTATCACTGATTATAAACAGAATCAACAATAATAGGAAAGAAGGGTGTTTCTTA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||