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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8684#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2642 fasta sequence
[TGCAGGAATGGCTGCACGACTGTGCACGTATTACCAGAAGACTTCACCTTCTGACCAAACAGCTACATCCCTGCGAAGCAACAGTGATGGACTGGGTACAATGCTTGCTATTGATCCCGCTGACAAATCTCCTTTTCTGGGGAACATTCGTTCTGGCTCCCACCAATCATGTCTTGAGACAAATATGTACAGAGCACCTGTATTTCCTCATAAGGTTGCGACGACAGATTATCTTTTAGTTCGTTCACCCAAAGGGATGCTTTCTCTTCGTCGCATTGACAAGTTGTATGCTGTTGGCCAACAGGAACCTCATATGGAAGTATTTTCACCTGGGACAAAAAATATGCAGAATTATATTCTGAATCGGATTCTTGTGTATGTATATCGTGAGTTCCGTGCTAGGGAGAAGCCTGGTATTATTCCTCAGATTCGAGCTGATGAATTACCTATTCAGCCTCCTATAACAGAGGCTATTGTGAGGAAACGGTTAAAGCATTGCGCGGATTTAAGGAAAGGACCAAAGGGACATTTGTTCTATATTCAGAGACCTGATTTTCGGATTCCATCGGAGGAAGAACTGAGAAGATTATTGACACCTGAAATGTCTGCTGTTATGAGAGTATGCAAGCTGGCCAGTATCGTCTCAAGCACTTAGGAATTGAGAAGCTTACTCAGCCTGTGGGACTTGCATCTGCCATGAATCAGCTTCCTGATGAAGCTATTGAGCTTGCTGCTGCAGCTCATATTGAGAGGGAATTGCAAATCACTAGCTGGAATCTTACCAGCAATTTTGTTGCTTGTACAAACCAGGACAAGGAAAATATAGAGAGATTAGAAATTACTGGTGTTGGTGATCCATCTGGCCGTGGGCTAGGATTTAGCTATGTACGAGTAACTCCAAAAGCACCTGTATCCAATTCAACACATAAGAAGAAGTCAGCTGCTGCAAAAGGCACCACTGTGACTGGAACAGATGCTGATCTCCGCAGGTTGAGCATGGATGCAGCTCGAGAGTTGCTACTCAAATTTGGCGTTCCAGAAGAGCAAATTGACAAGTTAACAAGGTGGCATCGGATCGCGATGGTGAGGAAGCTTTCAAGTGAACAAGCTGCATCGGGTGTTACAATGGATGAAATTCCAGTTAGTAAGTTTGCACGGGGACAAAGGATGTCTTTTCTGCAGCTTCAGCAGCAAACTAAAGAGAAATGTCAGGAAATTTGGGACAGACAAATTCAGTCACTTTCAGCTATGGACGGCAATGAAAATGGCAGTGACACAGAAGCTAACAGTGATCTTGACTCATTTGCTGGGGATCTTGAAAATTTGCTAGACGCAGAAGAATTTGATGATGAAGATGTTGGTAATACAGACATAAGAAGCGATAAAATGGATGGAATGAGAGGGCTTAAAATGAGAAGGTGTCATACTCAATCCCAAATTAATGAGGAAATTCAAGATGATGTAGCAGAGGCTGCTCTAGTAGAAAAACTGCTTGAAGAGAGTGATAGTGATATGAAGAGGAAGAAGCAGCCTGTGGAAACTACAAATTATAGCACTCCTATGTATAATCAGGGCAATAAAATGAAGCAGGGTAAGGCTGGCCAAATGATTAAATCGTCTGTATATGCCGGTGCATTAACCCCAAAAGAGAGCATACCAAGAGAAGCCAAGGAGGTTGAAAATTTTGCTGAAGGAAGTTTACCCTCAAAACTAAGAACAAAGACAGGATTTGATGCAAATGATGATATTATTCTAGTAAAAAGGAAAAATATCCCAGGAAAGGATGGGTTCAAGGAAAAGAGACAGGGTGCAAGGGGAGACACTCTTGTATGTGGAGCTTGTGGTCAGCTCGGGCACATGCGGACCAACAAACTGTGCCCCAAGTACGGGGAGGACCCTGAAACATCCGAAATGGATGTCAATTCCATCAGGTCTCATCCTCCTGATATTGTGAGTAATGCTCAAATAAAAACATCAAACAAGAGGTTGGTAGCAAAAGTTTCATCTGAAGCTTTTGAAACTGAAGGACCTGAAAGTATTGAAAAGGCTAAACCTGTCCCTGTAAAATTCAAATGTGGAGCACCTGAGAAGTCATTGGATAGGAACATGTCAATCTCAGCTTCTTTGGTTTCTGATAAACGTATGATGGATGCTACAGATTCGAAATCAACTGGAAAGGTTAATAAGATTAAAATATCTAACAAGATAAAATATGATGATTATCCTCCTGATACTCCTAAGCCATCTGTTGTAATAAGGCCTCCTGCTGAAGTGGAGAAGGATCTACCTCGTAAGAAAATTATTATCAAGCAGCCCAAGGTGCTTGGAGATCAGCAAAGACCTACTGAACTTAGGAGTGGTCAGGAGCCCAGAAAGACAAGGAAAATTGTTGAATTGTCAAGCTTTGAGAAGAGAGACAGAGAGGATGATAATGGTTTTTCTGGACAACCTATTCAGATCAATTCCTCACATGATAGGGGGT-GGGGTCTGGTGGG-AAAAAGAAGCAAAGGAATAATGGAAAGTAGTGAATCCTGGAGAGCTTTTGAGGAGCAACGAGAGAGACAAGAACAGAGACTAATTGAAGCTAGGATATATGATGCAAGGAGAGAGGATGA-GCTCCANAAGGCAAAGAAAAAAAAAAA]
[+] EMBL AK064421 [TGCAGGAATGGCTGCACGACTGTGCACGTATTACCAGAAGACTTCACCTTCTGACCAAACAGCTACATCCCTGCGAAGCAACAGTGATGGACTGGGTACAATGCTTGCTATTGATCCCGCTGACAAATCTCCTTTTCTGGGGAACATTCGTTCTGGCTCCCACCAATCATGTCTTGAGACAAATATGTACAGAGCACCTGTATTTCCTCATAAGGTTGCGACGACAGATTATCTTTTAGTTCGTTCACCCAAAGGGATGCTTTCTCTTCGTCGCATTGACAAGTTGTATGCTGTTGGCCAACAGGAACCTCATATGGAAGTATTTTCACCTGGGACAAAAAATATGCAGAATTATATTCTGAATCGGATTCTTGTGTATGTATATCGTGAGTTCCGTGCTAGGGAGAAGCCTGGTATTATTCCTCAGATTCGAGCTGATGAATTACCTATTCAGCCTCCTATAACAGAGGCTATTGTGAGGAAACGGTTAAAGCATTGCGCGGATTTAAGGAAAGGACCAAAGGGACATTTGTTCTATATTCAGAGACCTGATTTTCGGATTCCATCGGAGGAAGAACTGAGAAGATTATTGACACCTGAAATGTCTGCTGTTATGAGAGTATGCAAGCTGGCCAGTATCGTCTCAAGCACTTAGGAATTGAGAAGCTTACTCAGCCTGTGGGACTTGCATCTGCCATGAATCAGCTTCCTGATGAAGCTATTGAGCTTGCTGCTGCAGCTCATATTGAGAGGGAATTGCAAATCACTAGCTGGAATCTTACCAGCAATTTTGTTGCTTGTACAAACCAGGACAAGGAAAATATAGAGAGATTAGAAATTACTGGTGTTGGTGATCCATCTGGCCGTGGGCTAGGATTTAGCTATGTACGAGTAACTCCAAAAGCACCTGTATCCAATTCAACACATAAGAAGAAGTCAGCTGCTGCAAAAGGCACCACTGTGACTGGAACAGATGCTGATCTCCGCAGGTTGAGCATGGATGCAGCTCGAGAGTTGCTACTCAAATTTGGCGTTCCAGAAGAGCAAATTGACAAGTTAACAAGGTGGCATCGGATCGCGATGGTGAGGAAGCTTTCAAGTGAACAAGCTGCATCGGGTGTTACAATGGATGAAATTCCAGTTAGTAAGTTTGCACGGGGACAAAGGATGTCTTTTCTGCAGCTTCAGCAGCAAACTAAAGAGAAATGTCAGGAAATTTGGGACAGACAAATTCAGTCACTTTCAGCTATGGACGGCAATGAAAATGGCAGTGACACAGAAGCTAACAGTGATCTTGACTCATTTGCTGGGGATCTTGAAAATTTGCTAGACGCAGAAGAATTTGATGATGAAGATGTTGGTAATACAGACATAAGAAGCGATAAAATGGATGGAATGAGAGGGCTTAAAATGAGAAGGTGTCATACTCAATCCCAAATTAATGAGGAAATTCAAGATGATGTAGCAGAGGCTGCTCTAGTAGAAAAACTGCTTGAAGAGAGTGATAGTGATATGAAGAGGAAGAAGCAGCCTGTGGAAACTACAAATTATAGCACTCCTATGTATAATCAGGGCAATAAAATGAAGCAGGGTAAGGCTGGCCAAATGATTAAATCGTCTGTATATGCCGGTGCATTAACCCCAAAAGAGAGCATACCAAGAGAAGCCAAGGAGGTTGAAAATTTTGCTGAAGGAAGTTTACCCTCAAAACTAAGAACAAAGACAGGATTTGATGCAAATGATGATATTATTCTAGTAAAAAGGAAAAATATCCCAGGAAAGGATGGGTTCAAGGAAAAGAGACAGGGTGCAAGGGGAGACACTCTTGTATGTGGAGCTTGTGGTCAGCTCGGGCACATGCGGACCAACAAACTGTGCCCCAAGTACGGGGAGGACCCTGAAACATCCGAAATGGATGTCAATTCCATCAGGTCTCATCCTCCTGATATTGTGAGTAATGCTCAAATAAAAACATCAAACAAGAGGTTGGTAGCAAAAGTTTCGTCTGAAGCTTTTGAAACTGAAGGACCTGAAAGTATTGAAAAGGCTAAACCTGTCCCTGTAAAATTCAAATGTGGAGCACCTGAGAAGTCATTGGATAGGAACATGTCAATCTCAGCTTCTTTGGTTTCTGATAAACGTATGATGGATGCTACAGATTCGAAATCAACTGGAAAGGTTAATAAGATTAAAATATCTAACAAGATAAAATATGATGATTATCCTCCTGATACTCCTAAGCCATCTGTTGTAATAAGGCCTCCTGCTGAAGTGGAGAAGGATCTACCTCGTAAGAAAATTATTATCAAGCAGCCCAAGGTGCTTGGAGATCAGCAAAGACCTACTGAACTTAGGAGTGGTCAGGAGCCCAGAAAGACAAGGAAAATTGTTGAATTGTCAAGCTTTGAGAAGAGAGACAGAGAGGATGATAATGGTTTTTCTGGACAACCTATTCAGATCAATTCCTCACATGATAGGGGGT GGGGTCTGGTGGG AAAAAGAAGCAAAGGAATAATGGAAAGTAGTGAATCCTGGAGAGCTTTTGAGGAGCAACGGGAGAGACAAGAACAGAGACTAATTGAAGCTAGGATATATGATGCAAGGAGAGAGGATGA GCTCCA ]
[+] EMBL CB629947 [ GGCTTAAAATGATAAGGTGTCATACTCAAGCCCAAATTAATGAGGAAATTCAAGATGATGTAGCAGAGGCTGCTCTAGTAGAAAAACTGCTTGAAGAGAGTGATAGTGATATGAAGAGGAAGAAGCAGCCTGTGGAAACTACAAATTATAGCACTCCTATGTATAATCAGGGCAATAAAATGAAGCAGGGTAAGGCTGGCCAAATGATTAAATCGTCTGCATATGCCGGTGCATTAACCCCAAAAGAGAGCACACCAAGAGAAGCCAAGGAGGTTGAAAATTTTGCTGAAGGAAGTTTACCCTCAAAACTAAGAACAAAGACAGGATTTGATGCAAATGATGATATTATTCTAGTAAAAAGGAAAAATATCCCAGGAAAGGATGGGTTCAAGGAAAAGAGACAGGGTGCAAGGGGAGACACTCTTGTATGTGGAGCTTGTGGTCAGCTCGGGCACATGCGGACCAACAAACTGTGCCCCAAGTACGGGGAGGACCCTGAAACATCCGAAATGGATGTCAATTCCATCAGGTCTCATCCTCCTGATATTGTGAGTAATGCTCAAATAAAAACATCAAACAAGAGGTTGGTAGCAAAAGTTTCATCTGAAGCTTTTGAAACTGAAGGACCTGAAAGTATTGAAAAGGCTAAACCTGTCCCTGTAAAATTCAAATGTGGAGCACCTGAGAAGTCATTGGATAGGAACATGTCAATCTCAGCTTCTTTGGTTTCTGATAAACGTATGATGGATGCTACAGATTCGAAATCAACTGGAAAGGTCTATAAGATTAAAATATCTAACCAGATAAAAT ]
[+] EMBL CA764919 [ TTGTATGTGGAGCTTGTGGTCAGCTCGGGCACATGCGGACCAACAAACTGTGCCCCAAGTACGGGGAGGACCCTGAAACATCCGAAATAGATGTCAATTCCATCAGGTCTCATCCTCCTGATATTGTGAGTAATGCTCAAATAAAAACATCAAACAAGAGGTTGGTAGCAAAAGTTTCATCTGAAGCTTTTGAAACTGAAGGACCTGAAAGTATTGAAAAGGCTAAACCTGTCCCTGTAAAATTCAAATGTGGAGCACCTGAGAAGTCATTGGATAGGAACATGTCAATCTCAGCTTCTTTGGTTTCTGATAAACGTATGATGGATGCTACAGATTCGAAATCAACTGGAAAGGTTAATAAGATTAAAATATCTAACAAGATAAAATATGATGATTATCCTCCTGATACTCCTAAGCCATCTGTTGTAATAAGGCCTCCTGCTGAAGTGGAGAAGGATCTACCTCGTAAGAAAATTATTATCAAGCAGCCCAAGGTGCTTGGAGATCAGCAAAGACCTACTGAACTTAGGAGTGGTCAGGAGCCCAGAAAGACAAGGAAAATTGTTGAATTGTCAAGCTTTGAGAAGAGAGACAGAGAGGATGATAATGGTTTTTCTGGACAACCTATTCAGATCAATTCCTCACATGATAGGGGGTGGGGGTCTGGTGGGAAAAAAGAAGCAAAGG ATAATGGNAAGTAGTGAATCCTGGAGAGCTTTTGGNGGGCCACGAGAGAGACAAGAACAGGGACTAATTGAAGCTAGGATATATGATGCAAGGANAAAGGATGANCCTCCAN ]
[+] EMBL CB096485 [ TTGTATGTGGAGCTTGTGGTCNGCTCGGGCACATGCGGACCAACAAACTGTGCCCCAAGTACGGGGAGGACCCTGAAACATCCGAAATGGATGTCAATTCCATCAGGTCTCATCCTCCTGATATTGTGAGTAATGCTCAAATAAAAACATCAAACAAGAGGTTGGTAGCAAAAGTTTCATCTGAAGCTTTTGAAACTGAAGGACCTGAAAGTATTGAAAAGGCTAAACCTGTCCCTGTAAAATTCAAATGTGGAGCACCTGAGAAGTCATTGGATAGGAACATGTCAATCTCAGCTTCTTTGGTTTCTGATAAACGTATGATGGATGCTACAGATTCGAAATCAACTGGAAAGGTTAATAAGATTATAATATCTAACAAGATAAAATATGATGATTATCCTCCTGATACTCCTAAGCCATCTGTTGTAATAAGGCCTCCTGCTGAAGTGGAGAAGGATCTACCTCGTAAGAAAATTATTATCAAGCAGCCCAAGGTGCTTGGAGATCAGCAAAGACCTACTGAACTTAGGAGTGGTCAGGAGCCCAGAAAGACAAGGAAAATTGNTGAATTGTCAAGCTTTGAGAAGAGAGACAGAGAGGATGATAATGGTTTTTCTGGACAACCTATTCAGATCAATTNCTCACATGATAGGGGGT GGGGTCTGGTGGG NAAAAGAAGCCAAGGNATAATGGGAAGTAGTGAATCCTGGAGAGCTTTTGGNGGGCCACGNGAGAGNC AGGACAGAGACTAATTGGAGCTAGGA NTNTGATGCAAGGAGAGAGGATGA GCTnc ]
[-] EMBL CA762065 [ AGTTTCATCTGAAGCTTTTGAAACTGAAGGACCTGAAAGTATT AAAAGGCTAAACCTGTCCCTGTAAAATTCAAATGTGGAGCACCTGAGAAGTCATTGGATAGGAACATGTCAATCTCAGCTTCTTTGGTTTCTGATAAACGTCTGATGGATGCCACAGATTCGAAATCAACTGGAAAGGTTAATAAGATTAAAATATCTAACAAGATAAAATATGATGATTATCCTCCTGATACTCCTAAGCCATCTGTTGTAATAAGGCCTCCTGCTGAAGTGGAGAAGGATCTACCTCGTAAGAAAATTATTATCAAGCAGCCCAAGGTGCTTGGAGATCAGCAAAGACCTACTGAACTTAGGAGTGGTCAGGAGCCCAGAAAGCCAAGGAAAATTGTTGAATTGTCAAGCTTTGAGAAGAGAGACAGAGAGGATGATAATGGTTTTTCTGGACAACCTATTCAGATCAATTCCTCACATGATAGGGGGT GGGGTCTGGTGGG AAAAAGAAGCAAAGGAATAATGGAAAGTAGTGAATCCTGGAGAGCTTTTGAGGAGCAACGAGAGAGACAAGAACAGAGACTAATTGAAGCTAGGATATATGATGCAAGGAGAGAGGATGA GCTCCAGAAGGCAAAGAAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||