Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 87 cluster # 87       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_87#0 length = 693 sequences # 2  

consensusID : consensus_87#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 693
fasta sequence
                              [GTGCCCGGCTCGCGGGGCGCCACCCGCGCCGCACGACTGCCCACCCGGTCC-CTTCCCCTGCCGGCCGGCCCAACCAATCCCCCGTGCCCGCGCGCACCAAACCGACCATCCCGACGGCGAATCGCGTGGTGTGT--CGCGCGCGCGGGGTCTTAGCTCTCGGACGATCGCGCTCGCGGAGTCGCGGGGGTTCGGCCAGTTTCCGCGAACGTTCGCTCGGCGGAGGGCGGAGAGTAGATCCTGTCCACCGTTGCGTGGACCGGAGGCGGGCCGNGGGGGAGGCAGGCGGAATCTTGGGGCGG-CAGTCGGAACGTACGTCTCAACGTGGCCCAGATGCGATCCGGGGGGGAGGACTAGTTTACTTGCGGCCGTACGGTGCCG-AACTGTAAGGTTGTAATTGTANGTGACTGAACGACCAGGAAACGGAATGTGTTGTTGGCCTTTGGTTCTGAGGAGAGAACGGCCGGGGAAGCTGCAGAGATCGAGTCGATTTGGATCGCCGACGCCCGTTGATCCGTAGAGAACGATCGGTTGAAATTGGTAGAGGAAGAAGCACGGAAATTACAACAGCACATGTACAGCTAGAGGAGAGTAGGAGACAGGGTTTTTTTTCTTGGTTGACCCTTCATACAAATGCCGTGCAAAATATTCACAAAACCCAACCCTGCATCAAGCTAGAGTATTTAAAAAAAAAAA]

[+] EMBL OS0703A              [GTGCCCGGCTCGCGGGGCGCCACCCGCGCCGCACGACTGCCCACCCGGTCC CTTCCCCTGCCGGCCGGCCCAACCAATCCCCCGTGCCCGCGCGCACCAAACCGACCATCCCGACGGCGAATCGCGTGGTGTGT  CGCGCGCGCGGGGTCTTAGCTCTCGGACGATCGCGCTCGCGGAGTCGCGGGGGTTCGGCCAGTTTCCGCGAACGTTCGCTCGGCGGAGGGCGGAGAGTAGATCCTGTCCACCGTTGCGTGGACCGGAGGCGGGCCGNGGGGGAGGCAGGCGGAATCTTGGGGCGG CAGTCGGAACGTACGTCTCAACGTGGCCCAGATGCGATCCGGGGGGGAGGACTAGTTTACTTGCGGCCGTACGGTGCCG AACTGTAAGGTTGTAATTGTANGTGA                                                                                                                                                                                                                                                                                                 ]
[+] EMBL C98101               [                                         CAACCGGTCCNTTTCCCTTGCCGGCCGGCCCAACCAATCCCCCGTGCCCGCGCGCACCAAACCGACCATCCCGACGGCGAATCGCGTGGTGTGTTCCGCGCGCGCGCGG C TA CTCTCGGACGATCGCGCTCGCGGAGTCGCGGGGGTTCGGCCAGTTTCCGCGAACGTTCGCTCGGCGGAGGGCGGAGAGTAGATCCTGTCCACCGTTGCGTGGACCGGAGGCGGGCCGCGGGGGAGGCAGGCGGAATCTTGGGGCGGCCAGTCGGCACGCACGTCTCAACGTGGCCCAGATGCGATCCGGGGGGGAGGACTAGTTTACTCGCGGCCGTACGGTGCCGCACCTGTACGCTTGTACTCCTACGTGACTGAACGACCAGGAAACGGAATGTGTTGTTGGCCTTTGGTTCTGAGGAGAGAACGGCCGGGGAAGCTGCAGAGATCGAGTCGATTTGGATCGCCGACGCCCGTTGATCCGTAGAGAACGATCGGTTGAAATTGGTAGAGGAAGAAGCACGGAAATTACAACAGCACATGTACAGCTAGAGGAGAGTAGGAGACAGGGTTTTTTTTCTTGGTTGACCCTTCATACAAATGCCGTGCAAAATATTCACAAAACCCAACCCTGCATCAAGCTAGAGTATTTAAAAAAAAAAA]


>consensus_87#0 GTGCCCGGCTCGCGGGGCGCCACCCGCGCCGCACGACTGCCCACCCGGTCCCTTCCCCTG CCGGCCGGCCCAACCAATCCCCCGTGCCCGCGCGCACCAAACCGACCATCCCGACGGCGA ATCGCGTGGTGTGTCGCGCGCGCGGGGTCTTAGCTCTCGGACGATCGCGCTCGCGGAGTC GCGGGGGTTCGGCCAGTTTCCGCGAACGTTCGCTCGGCGGAGGGCGGAGAGTAGATCCTG TCCACCGTTGCGTGGACCGGAGGCGGGCCGNGGGGGAGGCAGGCGGAATCTTGGGGCGGC AGTCGGAACGTACGTCTCAACGTGGCCCAGATGCGATCCGGGGGGGAGGACTAGTTTACT TGCGGCCGTACGGTGCCGAACTGTAAGGTTGTAATTGTANGTGACTGAACGACCAGGAAA CGGAATGTGTTGTTGGCCTTTGGTTCTGAGGAGAGAACGGCCGGGGAAGCTGCAGAGATC GAGTCGATTTGGATCGCCGACGCCCGTTGATCCGTAGAGAACGATCGGTTGAAATTGGTA GAGGAAGAAGCACGGAAATTACAACAGCACATGTACAGCTAGAGGAGAGTAGGAGACAGG GTTTTTTTTCTTGGTTGACCCTTCATACAAATGCCGTGCAAAATATTCACAAAACCCAAC CCTGCATCAAGCTAGAGTATTTAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)