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Oryza sativa
cluster # 8707 cluster # 8707       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8707#0 length = 2434 sequences # 3  
consensus_8707#1 length = 613 sequences # 1  
consensus_8707#2 length = 325 sequences # 1  

consensusID : consensus_8707#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2434
fasta sequence
                              [TCGAGAGCAAGAGCAAACCACCTTCTTCTTCTTCTTCTCTTCTTCCTCTGCACTGCAGCTAGCTCTCTGCTCCGCCATGTGCCGCGGATCAGTCCTCCTCCTCCGTGTCCATGCCGCGCTGCTTCTCCTCGCGGCGCTCCCGGCGCTGATCGCCGGCCAGCCGTGGGAGATATGCGGGGAGAACGGCAACTACACGGCGAACAGCACCTACCAAGCCAACCTCAAGCAGCTCGCCGCGGCGCTCCACAAGAACGTCTCCTCCGGCACCGGCGGCGGCCGCCTCTTCGCCTCGGGCGCCGTCGGCGCCGTGCCGGACGCCGTCTACGCGCTCGCGCTCTGCCGCGGCGACATCAACGCCTCGGCCTGCGCCGACTGCGTCGGCACCATCTTCCAGGACGCGCAGCAGCTGTGCCCCTACCGCAAGGAGGTGTCCATCGTCTACGACAGCTGCTACCTCCGCTTCTCCAACCTCGACTTCCTCTCCTCCGCCGACAACTCCGGCGTCGTCGACCTCTACAACACCGGGACCGTCTCCGGCGACGTCGGCCGCTACGACCGCGCGGTGACGGGCCTCCTCAACGCCACGGCCAGGTACGCGGCGGGCAACACCAACGCGTCGTCCAGGCTGTTCGCGACGGGGGTGATGGTCGGGTTCGACGCCCAGTTCCCCAAGATCTACGCCATGGCGCAGTGCTCGCCGGACCTGTCGCCGGCGCAGTGCGGGCTGTGCCTCGGCGCCATGGTGGCGCGGTGGTGGCAGACGTTCGAGCCCAACACGCAGGGCGCCAGGAGCGTCGGCGCGCGCTGCAACATGCGGGTCGAGCTGTACTCGTTCTACAACGTCCCTTCCATGCTGCAGCTGCAAGCCGAGGCCGTCGCGCCGTCGCCATCGCCGGCGCCGGCGCCGGCAGGGAAGCCACCTGCTGTGCCGGGCACTACAGGAGGGAAAAGGAGAAACGGAGCAGGTAAAGTTCTTGCAATTGTAATGCCTATAGTTGCTGCCATACTGGCAGTCACTGTAATTGGCTTTTGTTTCTGGAGGAGGAGAAGACCAGAAAAAACACCTCCACCAGGACCGCTCCGATCCGCATCTCGTTCGGAGGACTTTGAGAGTATTGAGTCACTTTTTCTTGATCTATCAACACTCCGAATCGCAACAGATAACTTCTCCGAAAATAACAAACTTGGTGAAGGAGGATTTGGTGTTGTTTATAAGGGATCCCTACCACATGGTGAAGAGATAGCAGTAAAGAGGCTC-TCACAAAGC-TCTGTGCAAGGAATGGGTGAGCTGAAAAATGAGCTGGTTTTGGTTGCCAAGCTCCAGCACAAGAATCTTGTCCGTTTGGTCGGTGTTTGTCTAGAAGAGCATGAGAGGATGCTTGTCTATGAATACATGCCCAATAGAAGCTTGGATACCATTCTTTTTGATGCTGAGAAAAGCAGTCTGCTAGACTGGGGAAGAAGGCTGAAAATAATAAACGGAGTCGCTCGAGGAATGCAGTATCTCCATGAAGATTCCCAGCTGAAGATCGTTCATCGGGACCTTAAGGCAAGCAATGTTCTTCTAGACTCTGATTACAACCCCAAGATTTCAGACTTCGGCTTGGCAAGGCTCTTCGGAGGCGACCAAACACAGGACGTCACAAATCGCGTTGTCGGGACATATGGATACATGGCGCCAGAGTACGCGATGCGTGGGCACTACTCCGTTAAGTCAGACGTGTTCAGCTTCGGCGTCCTGGTCCTGGAGATCGTCACGGGGAGGAGGAACAGCGGCTCCTACTACAGCGAGCAATCCGGCGATCTCCTAAGCATTATATGGGAGCACTGGACCATGGGAACCATCATGGAGATGGTGGACCGGTCCATGGGCGAGCGCGCGGCGGGCGGCGAGATCG-CGAGGTGCATCCACGTCGGGCTGCTCTGCGTGCAGGAGAACCCGGCGAGCAGGCCGGCCATG-TCGGCGGTGAACGTGATGCTGAGCAGCGGCACGGTGTCGCTCAAGGCACCGTCCAGGCCGGCGTTCTACATCCGGAAGGGCGGCGGCGACGACGGCGGCGG-CA-CGGGGTCGTACTCGGGG-TCGTTCGTCGGCACCTTGCCGTCGTCCGGCAGGTCGGCGCCCATGTCGCCCAACGAGGTGTCCATCA-CTGAGCTCGAGCCGAGATAAGGAAGAAAAA-TGTAGCAGAGCCATGTCATGTCACA-GGAGTGAAGGGCTCCGGGGATGCCTAATTTGTGATTTTGTGT-GCTGTGATGGTGTCCTCAAGATGCTACAATGTATAGAAACAGGCA-GTAATCGTTGG-CA-AGAACAAAATGCCAGCAAAACAGTATAGCACTTTAGTGTTGTCTTTTAACTCTTATGGCGAATTATGCTGAGATAATTGCATGATTTGCAGGTGT-T-CATTACAAATATATTACCCTCGTTTCATATTAAAAA]

[+] EMBL AK101714             [TCGAGAGCAAGAGCAAACCACCTTCTTCTTCTTCTTCTCTTCTTCCTCTGCACTGCAGCTAGCTCTCTGCTCCGCCATGTGCCGCGGATCAGTCCTCCTCCTCCGTGTCCATGCCGCGCTGCTTCTCCTCGCGGCGCTCCCGGCGCTGATCGCCGGCCAGCCGTGGGAGATATGCGGGGAGAACGGCAACTACACGGCGAACAGCACCTACCAAGCCAACCTCAAGCAGCTCGCCGCGGCGCTCCACAAGAACGTCTCCTCCGGCACCGGCGGCGGCCGCCTCTTCGCCTCGGGCGCCGTCGGCGCCGTGCCGGACGCCGTCTACGCGCTCGCGCTCTGCCGCGGCGACATCAACGCCTCGGCCTGCGCCGACTGCGTCGGCACCATCTTCCAGGACGCGCAGCAGCTGTGCCCCTACCGCAAGGAGGTGTCCATCGTCTACGACAGCTGCTACCTCCGCTTCTCCAACCTCGACTTCCTCTCCTCCGCCGACAACTCCGGCGTCGTCGACCTCTACAACACCGGGACCGTCTCCGGCGACGTCGGCCGCTACGACCGCGCGGTGACGGGCCTCCTCAACGCCACGGCCAGGTACGCGGCGGGCAACACCAACGCGTCGTCCAGGCTGTTCGCGACGGGGGTGATGGTCGGGTTCGACGCCCAGTTCCCCAAGATCTACGCCATGGCGCAGTGCTCGCCGGACCTGTCGCCGGCGCAGTGCGGGCTGTGCCTCGGCGCCATGGTGGCGCGGTGGTGGCAGACGTTCGAGCCCAACACGCAGGGCGCCAGGAGCGTCGGCGCGCGCTGCAACATGCGGGTCGAGCTGTACTCGTTCTACAACGTCCCTTCCATGCTGCAGCTGCAAGCCGAGGCCGTCGCGCCGTCGCCATCGCCGGCGCCGGCGCCGGCAGGGAAGCCACCTGCTGTGCCGGGCACTACAGGAGGGAAAAGGAGAAACGGAGCAGGTAAAGTTCTTGCAATTGTAATGCCTATAGTTGCTGCCATACTGGCAGTCACTGTAATTGGCTTTTGTTTCTGGAGGAGGAGAAGACCAGAAAAAACACCTCCACCAGGACCGCTCCGATCCGCATCTCGTTCGGAGGACTTTGAGAGTATTGAGTCACTTTTTCTTGATCTATCAACACTCCGAATCGCAACAGATAACTTCTCCGAAAATAACAAACTTGGTGAAGGAGGATTTGGTGTTGTTTATAAGGGATCCCTACCACATGGTGAAGAGATAGCAGTAAAGAGGCTC TCACAAAGC TCTGTGCAAGGAATGGGTGAGCTGAAAAATGAGCTGGTTTTGGTTGCCAAGCTCCAGCACAAGAATCTTGTCCGTTTGGTCGGTGTTTGTCTAGAAGAGCATGAGAGGATGCTTGTCTATGAATACATGCCCAATAGAAGCTTGGATACCATTCTTTTTGATGCTGAGAAAAGCAGTCTGCTAGACTGGGGAAGAAGGCTGAAAATAATAAACGGAGTCGCTCGAGGAATGCAGTATCTCCATGAAGATTCCCAGCTGAAGATCGTTCATCGGGACCTTAAGGCAAGCAATGTTCTTCTAGACTCTGATTACAACCCCAAGATTTCAGACTTCGGCTTGGCAAGGCTCTTCGGAGGCGACCAAACACAGGACGTCACAAATCGCGTTGTCGGGACATATGGATACATGGCGCCAGAGTACGCGATGCGTGGGCACTACTCCGTTAAGTCAGACGTGTTCAGCTTCGGCGTCCTGGTCCTGGAGATCGTCACGGGGAGGAGGAACAGCGGCTCCTACTACAGCGAGCAATCCGGCGATCTCCTAAGCATTATATGGGAGCACTGGACCATGGGAACCATCATGGAGATGGTGGACCGGTCCATGGGCGAGCGCGCGGCGGGCGGCGAGATCG CGAGGTGCATCCACGTCGGGCTGCTCTGCGTGCAGGAGAACCCGGCGAGCAGGCCGGCCATG TCGGCGGTGAACGTGATGCTGAGCAGCGGCACGGTGTCGCTCAAGGCACCGTCCAGGCCGGCGTTCTACATCCGGAAGGGCGGCGGCGACGACGGCGGCGG CA CGGGGTCGTACTCGGGG TCGTTCGTCGGCACCTTGCCGTCGTCCGGCAGGTCGGCGCCCATGTCGCCCAACGAGGTGTCCATCA CTGAGCTCGAGCCGAGATAAGGAAGAAAAA TGTAGCAGAGCCATGTCATGTCACA GGAGTGAAGGGCTCCGGGGATGCCTAATTTGTGATTTTGTGT GCTGTGATGGTGTCCTCAAGATGCTACAATGTATAGAAACAGGCA GTAATCGTTGG CA AGAACAAAATGCCAGCAAAACAGTATAGCACTTTAGTGTTGTCTTTTAACTCTTATGGCGAATTATGCTGAGATAATTGCATGATTTGCAGGTGT T CATTACAAATATATTACCCTC               ]
[+] EMBL D43320               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCAGTCACTGTAATTGGCTTTTGTTTCTGGAGGAGGAGAAGACCAGAAAAAACACCTCCACCAGGACCGCTCCGATCCGCATCTCGTTCGGAGGACTTTGAGAGTATTGAGTCACTTTTTCTTGATCTATCAACACTCCGAATCGCAACAGATAACTTCTCCGAAAATAACAAACTTGGTGAAGGNGGATTTGGTGTTGTTTATAAGGGATCCCTACCACATGGTGAAGNGATAGCAGTAAAGAGGCTCTTCACAAAGCTTCTGTGCAAGGAATTGGGGAGCTNNAAAATNAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BI801942             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   tGACCGGTCCATGGGCGAGCGCGC GC GGCGGCGAGATCGCCGAGGTGCATCCACGTCGGGCTGCTCTGCGTGCAGGAGAACCCGGCGAGCAGGCCGGCCATGCTCGACGGTGAACGTGATGCTGAGCA CGGCACGGTGTCGCTCAAGGCACCGTCCAGCCCGGCGTTCTACATCCGGAAGGGCGGCGGCGACGACGGCGGCGGCCACCGGGGTCGTACTCGGGGCTCGTTCGTCGGCACCTTGCCGTCGTCCGGCAGGTCGGCGCCCATGTCGCCCAACGAGGTGTCCATCACCTGAGCTCGAGCCGAGATAAGGAAGAAAAACTGTAGCAGAGCCATGTCATGTCACACGGAGTGAAGGGCTCCGGGGATGCCTAATTTGTGATTTTGTGTCCCTGTGATGGTGTCCTCAAGATGCTACCATGTATAGAAACA GCACGTAATCGTTGGCCACAGAACAAACTGCCA CCAAACAGTATAGCACTTTAGTGTTGTCTTTTAACTCTTATGGCGAATTATGCTGAGATAATTGCATGATTT CAGGTCTCTCCCTTAC AATATATTACCCTCGTTTCATATTAAAAA]


>consensus_8707#0 TCGAGAGCAAGAGCAAACCACCTTCTTCTTCTTCTTCTCTTCTTCCTCTGCACTGCAGCT AGCTCTCTGCTCCGCCATGTGCCGCGGATCAGTCCTCCTCCTCCGTGTCCATGCCGCGCT GCTTCTCCTCGCGGCGCTCCCGGCGCTGATCGCCGGCCAGCCGTGGGAGATATGCGGGGA GAACGGCAACTACACGGCGAACAGCACCTACCAAGCCAACCTCAAGCAGCTCGCCGCGGC GCTCCACAAGAACGTCTCCTCCGGCACCGGCGGCGGCCGCCTCTTCGCCTCGGGCGCCGT CGGCGCCGTGCCGGACGCCGTCTACGCGCTCGCGCTCTGCCGCGGCGACATCAACGCCTC GGCCTGCGCCGACTGCGTCGGCACCATCTTCCAGGACGCGCAGCAGCTGTGCCCCTACCG CAAGGAGGTGTCCATCGTCTACGACAGCTGCTACCTCCGCTTCTCCAACCTCGACTTCCT CTCCTCCGCCGACAACTCCGGCGTCGTCGACCTCTACAACACCGGGACCGTCTCCGGCGA CGTCGGCCGCTACGACCGCGCGGTGACGGGCCTCCTCAACGCCACGGCCAGGTACGCGGC GGGCAACACCAACGCGTCGTCCAGGCTGTTCGCGACGGGGGTGATGGTCGGGTTCGACGC CCAGTTCCCCAAGATCTACGCCATGGCGCAGTGCTCGCCGGACCTGTCGCCGGCGCAGTG CGGGCTGTGCCTCGGCGCCATGGTGGCGCGGTGGTGGCAGACGTTCGAGCCCAACACGCA GGGCGCCAGGAGCGTCGGCGCGCGCTGCAACATGCGGGTCGAGCTGTACTCGTTCTACAA CGTCCCTTCCATGCTGCAGCTGCAAGCCGAGGCCGTCGCGCCGTCGCCATCGCCGGCGCC GGCGCCGGCAGGGAAGCCACCTGCTGTGCCGGGCACTACAGGAGGGAAAAGGAGAAACGG AGCAGGTAAAGTTCTTGCAATTGTAATGCCTATAGTTGCTGCCATACTGGCAGTCACTGT AATTGGCTTTTGTTTCTGGAGGAGGAGAAGACCAGAAAAAACACCTCCACCAGGACCGCT CCGATCCGCATCTCGTTCGGAGGACTTTGAGAGTATTGAGTCACTTTTTCTTGATCTATC AACACTCCGAATCGCAACAGATAACTTCTCCGAAAATAACAAACTTGGTGAAGGAGGATT TGGTGTTGTTTATAAGGGATCCCTACCACATGGTGAAGAGATAGCAGTAAAGAGGCTCTC ACAAAGCTCTGTGCAAGGAATGGGTGAGCTGAAAAATGAGCTGGTTTTGGTTGCCAAGCT CCAGCACAAGAATCTTGTCCGTTTGGTCGGTGTTTGTCTAGAAGAGCATGAGAGGATGCT TGTCTATGAATACATGCCCAATAGAAGCTTGGATACCATTCTTTTTGATGCTGAGAAAAG CAGTCTGCTAGACTGGGGAAGAAGGCTGAAAATAATAAACGGAGTCGCTCGAGGAATGCA GTATCTCCATGAAGATTCCCAGCTGAAGATCGTTCATCGGGACCTTAAGGCAAGCAATGT TCTTCTAGACTCTGATTACAACCCCAAGATTTCAGACTTCGGCTTGGCAAGGCTCTTCGG AGGCGACCAAACACAGGACGTCACAAATCGCGTTGTCGGGACATATGGATACATGGCGCC AGAGTACGCGATGCGTGGGCACTACTCCGTTAAGTCAGACGTGTTCAGCTTCGGCGTCCT GGTCCTGGAGATCGTCACGGGGAGGAGGAACAGCGGCTCCTACTACAGCGAGCAATCCGG CGATCTCCTAAGCATTATATGGGAGCACTGGACCATGGGAACCATCATGGAGATGGTGGA CCGGTCCATGGGCGAGCGCGCGGCGGGCGGCGAGATCGCGAGGTGCATCCACGTCGGGCT GCTCTGCGTGCAGGAGAACCCGGCGAGCAGGCCGGCCATGTCGGCGGTGAACGTGATGCT GAGCAGCGGCACGGTGTCGCTCAAGGCACCGTCCAGGCCGGCGTTCTACATCCGGAAGGG CGGCGGCGACGACGGCGGCGGCACGGGGTCGTACTCGGGGTCGTTCGTCGGCACCTTGCC GTCGTCCGGCAGGTCGGCGCCCATGTCGCCCAACGAGGTGTCCATCACTGAGCTCGAGCC GAGATAAGGAAGAAAAATGTAGCAGAGCCATGTCATGTCACAGGAGTGAAGGGCTCCGGG GATGCCTAATTTGTGATTTTGTGTGCTGTGATGGTGTCCTCAAGATGCTACAATGTATAG AAACAGGCAGTAATCGTTGGCAAGAACAAAATGCCAGCAAAACAGTATAGCACTTTAGTG TTGTCTTTTAACTCTTATGGCGAATTATGCTGAGATAATTGCATGATTTGCAGGTGTTCA TTACAAATATATTACCCTCGTTTCATATTAAAAA



consensusID : consensus_8707#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 613
fasta sequence
                              [TCGTCACGGGGAGGAGGAACAGCGGCTCCTACTACAGCGAGCAATCCGGCGATCTCCTAAGCATTATATGGGAGCACTGGACCATGGGAACCATCATGGAGATGGTGGACCGGTCCATGGGCGAGCGCGCGGCGGGCGGCGAGATCGCGAGGTGCATCCACGTCGGGCTGCTCTGCGTGCAGGAGAACCCGGCGAGCAGGCCGGCCATGTCGGCGGTGAACGTGATGCTGAGCAGCGGCACGGTGTCGCTCAAGGCACCGTCCAGGCCGGCGTCCTACATCCGGAAGGGCGGCGGCGACGACGGCGGCGGCACGGGGTCGTACTCGGGGTCGTTCGTCGGCACCTTGCCCTCCTCCGGCAGGTCGGCGCCCATGTCCCCCAACGAGGTGTCCATCACTGACCCCGACCCCAGATAACGAACAAAAATGTACCAGAGCCATGTCATGTTCCAGGAGTGAAGGGCTCCCGGGATGCCTAATTTGTGATTCCGTGTGCCGTGATCGGTGTCCCCCCCATGCTACAATGTATAGAAAACCCGCACTAATCGTGGGCAAACCACAATGCCCCCAACCGTATACACTTTACTGTTGTCTCTACCCCTATGCAATTATCC]

[+] EMBL CA753139             [TCGTCACGGGGAGGAGGAACAGCGGCTCCTACTACAGCGAGCAATCCGGCGATCTCCTAAGCATTATATGGGAGCACTGGACCATGGGAACCATCATGGAGATGGTGGACCGGTCCATGGGCGAGCGCGCGGCGGGCGGCGAGATCGCGAGGTGCATCCACGTCGGGCTGCTCTGCGTGCAGGAGAACCCGGCGAGCAGGCCGGCCATGTCGGCGGTGAACGTGATGCTGAGCAGCGGCACGGTGTCGCTCAAGGCACCGTCCAGGCCGGCGTCCTACATCCGGAAGGGCGGCGGCGACGACGGCGGCGGCACGGGGTCGTACTCGGGGTCGTTCGTCGGCACCTTGCCCTCCTCCGGCAGGTCGGCGCCCATGTCCCCCAACGAGGTGTCCATCACTGACCCCGACCCCAGATAACGAACAAAAATGTACCAGAGCCATGTCATGTTCCAGGAGTGAAGGGCTCCCGGGATGCCTAATTTGTGATTCCGTGTGCCGTGATCGGTGTCCCCCCCATGCTACAATGTATAGAAAACCCGCACTAATCGTGGGCAAACCACAATGCCCCCAACCGTATACACTTTACTGTTGTCTCTACCCCTATGCAATTATCC]


>consensus_8707#1 TCGTCACGGGGAGGAGGAACAGCGGCTCCTACTACAGCGAGCAATCCGGCGATCTCCTAA GCATTATATGGGAGCACTGGACCATGGGAACCATCATGGAGATGGTGGACCGGTCCATGG GCGAGCGCGCGGCGGGCGGCGAGATCGCGAGGTGCATCCACGTCGGGCTGCTCTGCGTGC AGGAGAACCCGGCGAGCAGGCCGGCCATGTCGGCGGTGAACGTGATGCTGAGCAGCGGCA CGGTGTCGCTCAAGGCACCGTCCAGGCCGGCGTCCTACATCCGGAAGGGCGGCGGCGACG ACGGCGGCGGCACGGGGTCGTACTCGGGGTCGTTCGTCGGCACCTTGCCCTCCTCCGGCA GGTCGGCGCCCATGTCCCCCAACGAGGTGTCCATCACTGACCCCGACCCCAGATAACGAA CAAAAATGTACCAGAGCCATGTCATGTTCCAGGAGTGAAGGGCTCCCGGGATGCCTAATT TGTGATTCCGTGTGCCGTGATCGGTGTCCCCCCCATGCTACAATGTATAGAAAACCCGCA CTAATCGTGGGCAAACCACAATGCCCCCAACCGTATACACTTTACTGTTGTCTCTACCCC TATGCAATTATCC



consensusID : consensus_8707#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 325
fasta sequence
                              [ATGTCGCCCAACGAGGTGTCCATCACTGAGCTCGAGCCGAGATAAGGAAGAAAAATGTAGCAGAGCCATGTCATGTCACAGGAGTGAAGGGCTCCGGGGATGCCTAATTTGTGATTTTGTGTGCTGTGATGGTGTCCTCAAGATGCTACAATGTATAGAAACAGGCAGTAATCGTTGGCAAGAACAAAATGCCAGCAAAACAGTATAGCACTTTAGTGTTGTCTTTTAACTCTTATGGCGAATTATGCTGAGATAATTGCATGATTTGCAGGTGTTCNTTNNNNAANANANNNNNNNNNNNNNNNNNNAAAAGCTTGACCTCGGC]

[+] EMBL AW069983             [ATGTCGCCCAACGAGGTGTCCATCACTGAGCTCGAGCCGAGATAAGGAAGAAAAATGTAGCAGAGCCATGTCATGTCACAGGAGTGAAGGGCTCCGGGGATGCCTAATTTGTGATTTTGTGTGCTGTGATGGTGTCCTCAAGATGCTACAATGTATAGAAACAGGCAGTAATCGTTGGCAAGAACAAAATGCCAGCAAAACAGTATAGCACTTTAGTGTTGTCTTTTAACTCTTATGGCGAATTATGCTGAGATAATTGCATGATTTGCAGGTGTTCNTTNNNNAANANANNNNNNNNNNNNNNNNNNAAAAGCTTGACCTCGGC]


>consensus_8707#2 ATGTCGCCCAACGAGGTGTCCATCACTGAGCTCGAGCCGAGATAAGGAAGAAAAATGTAG CAGAGCCATGTCATGTCACAGGAGTGAAGGGCTCCGGGGATGCCTAATTTGTGATTTTGT GTGCTGTGATGGTGTCCTCAAGATGCTACAATGTATAGAAACAGGCAGTAATCGTTGGCA AGAACAAAATGCCAGCAAAACAGTATAGCACTTTAGTGTTGTCTTTTAACTCTTATGGCG AATTATGCTGAGATAATTGCATGATTTGCAGGTGTTCNTTNNNNAANANANNNNNNNNNN NNNNNNNNAAAAGCTTGACCTCGGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8707#0      TCGAGAGCAAGAGCAAACCACCTTCTTCTTCTTCTTCTCTTCTTCCTCTGCACTGCAGCT 60
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      AGCTCTCTGCTCCGCCATGTGCCGCGGATCAGTCCTCCTCCTCCGTGTCCATGCCGCGCT 120
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      GCTTCTCCTCGCGGCGCTCCCGGCGCTGATCGCCGGCCAGCCGTGGGAGATATGCGGGGA 180
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      GAACGGCAACTACACGGCGAACAGCACCTACCAAGCCAACCTCAAGCAGCTCGCCGCGGC 240
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      GCTCCACAAGAACGTCTCCTCCGGCACCGGCGGCGGCCGCCTCTTCGCCTCGGGCGCCGT 300
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      CGGCGCCGTGCCGGACGCCGTCTACGCGCTCGCGCTCTGCCGCGGCGACATCAACGCCTC 360
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      GGCCTGCGCCGACTGCGTCGGCACCATCTTCCAGGACGCGCAGCAGCTGTGCCCCTACCG 420
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      CAAGGAGGTGTCCATCGTCTACGACAGCTGCTACCTCCGCTTCTCCAACCTCGACTTCCT 480
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      CTCCTCCGCCGACAACTCCGGCGTCGTCGACCTCTACAACACCGGGACCGTCTCCGGCGA 540
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      CGTCGGCCGCTACGACCGCGCGGTGACGGGCCTCCTCAACGCCACGGCCAGGTACGCGGC 600
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      GGGCAACACCAACGCGTCGTCCAGGCTGTTCGCGACGGGGGTGATGGTCGGGTTCGACGC 660
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      CCAGTTCCCCAAGATCTACGCCATGGCGCAGTGCTCGCCGGACCTGTCGCCGGCGCAGTG 720
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      CGGGCTGTGCCTCGGCGCCATGGTGGCGCGGTGGTGGCAGACGTTCGAGCCCAACACGCA 780
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      GGGCGCCAGGAGCGTCGGCGCGCGCTGCAACATGCGGGTCGAGCTGTACTCGTTCTACAA 840
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      CGTCCCTTCCATGCTGCAGCTGCAAGCCGAGGCCGTCGCGCCGTCGCCATCGCCGGCGCC 900
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      GGCGCCGGCAGGGAAGCCACCTGCTGTGCCGGGCACTACAGGAGGGAAAAGGAGAAACGG 960
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      AGCAGGTAAAGTTCTTGCAATTGTAATGCCTATAGTTGCTGCCATACTGGCAGTCACTGT 1020
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      AATTGGCTTTTGTTTCTGGAGGAGGAGAAGACCAGAAAAAACACCTCCACCAGGACCGCT 1080
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      CCGATCCGCATCTCGTTCGGAGGACTTTGAGAGTATTGAGTCACTTTTTCTTGATCTATC 1140
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      AACACTCCGAATCGCAACAGATAACTTCTCCGAAAATAACAAACTTGGTGAAGGAGGATT 1200
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      TGGTGTTGTTTATAAGGGATCCCTACCACATGGTGAAGAGATAGCAGTAAAGAGGCTCTC 1260
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      ACAAAGCTCTGTGCAAGGAATGGGTGAGCTGAAAAATGAGCTGGTTTTGGTTGCCAAGCT 1320
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      CCAGCACAAGAATCTTGTCCGTTTGGTCGGTGTTTGTCTAGAAGAGCATGAGAGGATGCT 1380
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      TGTCTATGAATACATGCCCAATAGAAGCTTGGATACCATTCTTTTTGATGCTGAGAAAAG 1440
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      CAGTCTGCTAGACTGGGGAAGAAGGCTGAAAATAATAAACGGAGTCGCTCGAGGAATGCA 1500
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      GTATCTCCATGAAGATTCCCAGCTGAAGATCGTTCATCGGGACCTTAAGGCAAGCAATGT 1560
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      TCTTCTAGACTCTGATTACAACCCCAAGATTTCAGACTTCGGCTTGGCAAGGCTCTTCGG 1620
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      AGGCGACCAAACACAGGACGTCACAAATCGCGTTGTCGGGACATATGGATACATGGCGCC 1680
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      AGAGTACGCGATGCGTGGGCACTACTCCGTTAAGTCAGACGTGTTCAGCTTCGGCGTCCT 1740
consensus_8707#1      ------------------------------------------------------------
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      GGTCCTGGAGATCGTCACGGGGAGGAGGAACAGCGGCTCCTACTACAGCGAGCAATCCGG 1800
consensus_8707#1      -----------TCGTCACGGGGAGGAGGAACAGCGGCTCCTACTACAGCGAGCAATCCGG 49
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      CGATCTCCTAAGCATTATATGGGAGCACTGGACCATGGGAACCATCATGGAGATGGTGGA 1860
consensus_8707#1      CGATCTCCTAAGCATTATATGGGAGCACTGGACCATGGGAACCATCATGGAGATGGTGGA 109
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      CCGGTCCATGGGCGAGCGCGCGGCGGGCGGCGAGATCGCGAGGTGCATCCACGTCGGGCT 1920
consensus_8707#1      CCGGTCCATGGGCGAGCGCGCGGCGGGCGGCGAGATCGCGAGGTGCATCCACGTCGGGCT 169
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      GCTCTGCGTGCAGGAGAACCCGGCGAGCAGGCCGGCCATGTCGGCGGTGAACGTGATGCT 1980
consensus_8707#1      GCTCTGCGTGCAGGAGAACCCGGCGAGCAGGCCGGCCATGTCGGCGGTGAACGTGATGCT 229
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      GAGCAGCGGCACGGTGTCGCTCAAGGCACCGTCCAGGCCGGCGTTCTACATCCGGAAGGG 2040
consensus_8707#1      GAGCAGCGGCACGGTGTCGCTCAAGGCACCGTCCAGGCCGGCGTCCTACATCCGGAAGGG 289
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      CGGCGGCGACGACGGCGGCGGCACGGGGTCGTACTCGGGGTCGTTCGTCGGCACCTTGCC 2100
consensus_8707#1      CGGCGGCGACGACGGCGGCGGCACGGGGTCGTACTCGGGGTCGTTCGTCGGCACCTTGCC 349
consensus_8707#2      ------------------------------------------------------------
                                                                                  

consensus_8707#0      GTCGTCCGGCAGGTCGGCGCCCATGTCGCCCAACGAGGTGTCCATCACTGAGCTCGAGCC 2160
consensus_8707#1      CTCCTCCGGCAGGTCGGCGCCCATGTCCCCCAACGAGGTGTCCATCACTGACCCCGACCC 409
consensus_8707#2      ----------------------ATGTCGCCCAACGAGGTGTCCATCACTGAGCTCGAGCC 38
                                            ***** *********************** * *** **

consensus_8707#0      GAGATAAGGAAGAAAAATGTAGCAGAGCCATGTCATGTCACAGGAGTGAAGGGCTCCGGG 2220
consensus_8707#1      CAGATAACGAACAAAAATGTACCAGAGCCATGTCATGTTCCAGGAGTGAAGGGCTCCCGG 469
consensus_8707#2      GAGATAAGGAAGAAAAATGTAGCAGAGCCATGTCATGTCACAGGAGTGAAGGGCTCCGGG 98
                       ****** *** ********* ****************  ***************** **

consensus_8707#0      GATGCCTAATTTGTGATTTTGTGTGCTGTGAT-GGTGTCCTCAAGATGCTACAATGTATA 2279
consensus_8707#1      GATGCCTAATTTGTGATTCCGTGTGCCGTGATCGGTGTCCCCCCCATGCTACAATGTATA 529
consensus_8707#2      GATGCCTAATTTGTGATTTTGTGTGCTGTGAT-GGTGTCCTCAAGATGCTACAATGTATA 157
                      ******************  ****** ***** ******* *   ***************

consensus_8707#0      GAAA-CAGGCAGTAATCGTTGGCAAGAACAAAATGCCAGCAAAACAGTATAGCACTTTAG 2338
consensus_8707#1      GAAAACCCGCACTAATCGTGGGCAA-ACCACAATGCCCCCA--ACCGTATA-CACTTTAC 585
consensus_8707#2      GAAA-CAGGCAGTAATCGTTGGCAAGAACAAAATGCCAGCAAAACAGTATAGCACTTTAG 216
                      **** *  *** ******* ***** * ** ******  **  ** ***** ******* 

consensus_8707#0      TGTTGTCTTTTAACTCTTATGGCGAATTATGCTGAGATAATTGCATGATTTGCAGGTGTT 2398
consensus_8707#1      TGTTGTCTCT--ACCCCTATG--CAATTATCC---------------------------- 613
consensus_8707#2      TGTTGTCTTTTAACTCTTATGGCGAATTATGCTGAGATAATTGCATGATTTGCAGGTGTT 276
                      ******** *  ** * ****   ****** *                            

consensus_8707#0      CATTACAAATATATTACCCTCGTTTCATATTAAAAA------------- 2434
consensus_8707#1      -------------------------------------------------
consensus_8707#2      CNTTNNNNAANANANNNNNNNNNNNNNNNNNNAAAAGCTTGACCTCGGC 325
                                                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)