These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8709#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1342 fasta sequence [CAAGCTGTTCGGCCGCCGGCGCGAAGAACATGGAGTCCGTGGTGGTGGCCGGAGATCTGGCCGCTGCACCGGCGCCGGCGACGCCGAT-GTGGTTCGTGGCGCTGGTCGCCGTCGGCCTGCACGCGGCGGTCGTGTGGGCGGGGACGTTCCTCGCGTGGCTCCGCCGCGCGT-TCCTCCGGCCCGGGAAGGGCCTGTGCCGGCGGTACGGCGAGTGGGCGGTGGTCACCGGCGCCACCGACGGCATCGGACGCGCGGTGGCGCTGGAGCTGGCTCGCCGCGGGCTCCACCTCGTGCTCGTGGGGCGGAACCCCGGGAAGCTGTCGGGCGTCT-GCAAGGAGGTCCGCGCAGCGGCGCCGGCGTGCAAGGTGAGGACCGTGGTGTTCGACCTCGCCGCCCCAGGGGACGACGACGTCGGGGGCGGCGAGCTGTCCCGCGGCGTGGCGAGGGTGGCGGCGGCCGTGGAGGGGCTCGACGTGGGGCTGCTCGTGAACAACGCCGGCGCGACGTACCCGTGCGCGGCGTACTTCCACGAGGTGCCCGACGCGGTCTGGGGGGCGGTGCTGCGGGTGAACGTGGTGGCGGCGACGAGGATCGCGCGCGCCCTCGTGCCGGCCATGGCGGCGAAGGGGAGGGGTGCCGTCGTCAACGTCGGCTCCGGCTCCTCCGTCGTCGTGCCGGCGTTCCCGCTCTACGCCGTGTACGCAGCGACCAAAGCGTATGTTGACCAATTGTCTCGAAGTCTACATGTTGAATACAAGCATCACGGAGTGGATGTGCAATGCCAGATACCATTATATGTCGCCACAAAGATGTCACCTGTCCAGGGTAACTCGCCGTTTATACCATCACCCGAGGAGTACGCCAAGGCTGCTGTCCGCTGCATCGGTTATGAGCCAAGATGTGTCCCCTACTGGCGCCACTCGATCCAGTGGTTCTTTGCATCTCTACTGCCAGATTCTGTTCTGAATCTATGGCGTCTCCAGGTTGGAATCCGGAAGAGAAATCAGATGAAGGTTCTGCTTGGTGAGAGC-GAT-CA-TGGATTCAGTT--A-AAC-TG-CCAT-AAATG-TTGGTTTTG-TG-AAGTG-TG-TGTTAATCTATT-CGAACAAA-ATAGTATATACATCAATCTGGGATTTGGGTAGTAGTATATACTTCGATGAGTTATGTGCTGAATATAATGGAATGGCATTTAGTGTTTGTTTTGAACTTTGGGTAGTGGTTTTGTTTGCACCTCTAGCACTATTTTTTATTGGTTTGTGCGAGTTGGAATTATTAGTACTTTTCCATTCAGTGTAATCGAGAAATAAACAATGTAAAATATGATGATGAATCTTAGTATTCCCTCCAAAAAA] [+] EMBL AK059916 [CAAGCTGTTCGGCCGCCGGCGCGAAGAACATGGAGTCCGTGGTGGTGGCCGGAGATCTGGCCGCTGCACCGGCGCCGGCGACGCCGAT GTGGTTCGTGGCGCTGGTCGCCGTCGGCCTGCACGCGGCGGTCGTGTGGGCGGGGACGTTCCTCGCGTGGCTCCGCCGCGCGT TCCTCCGGCCCGGGAAGGGCCTGTGCCGGCGGTACGGCGAGTGGGCGGTGGTCACCGGCGCCACCGACGGCATCGGACGCGCGGTGGCGCTGGAGCTGGCTCGCCGCGGGCTCCACCTCGTGCTCGTGGGGCGGAACCCCGGGAAGCTGTCGGGCGTCT GCAAGGAGGTCCGCGCAGCGGCGCCGGCGTGCAAGGTGAGGACCGTGGTGTTCGACCTCGCCGCCCCAGGGGACGACGACGTCGGGGGCGGCGAGCTGTCCCGCGGCGTGGCGAGGGTGGCGGCGGCCGTGGAGGGGCTCGACGTGGGGCTGCTCGTGAACAACGCCGGCGCGACGTACCCGTGCGCGGCGTACTTCCACGAGGTGCCCGACGCGGTCTGGGGGGCGGTGCTGCGGGTGAACGTGGTGGCGGCGACGAGGATCGCGCGCGCCCTCGTGCCGGCCATGGCGGCGAAGGGGAGGGGTGCCGTCGTCAACGTCGGCTCCGGCTCCTCCGTCGTCGTGCCGGCGTTCCCGCTCTACGCCGTGTACGCAGCGACCAAAGCGTATGTTGACCAATTGTCTCGAAGTCTACATGTTGAATACAAGCATCACGGAGTGGATGTGCAATGCCAGATACCATTATATGTCGCCACAAAGATGTCACCTGTCCAGGGTAACTCGCCGTTTATACCATCACCCGAGGAGTACGCCAAGGCTGCTGTCCGCTGCATCGGTTATGAGCCAAGATGTGTCCCCTACTGGCGCCACTCGATCCAGTGGTTCTTTGCATCTCTACTGCCAGATTCTGTTCTGAATCTATGGCGTCTCCAGGTTGGAATCCGGAAGAGAAATCAGATGAAGGTTCTGCTTGGTGAGAGC GAT CA TGGATTCAGTT A AAC TG CCAT AAATG TTGGTTTTG TG AAGTG TG TGTTAATCTATT CGAACAAA ATAGTATATACATCAATCTGGGATTTGGGTAGTAGTATATACTTCGATGAGTTATGTGCTGAATATAATGGAATGGCATTTAGTGTTTGTTTTGAACTTTGGGTAGTGGTTTTGTTTGCACCTCTAGCACTATTTTTTATTGGTTTGTGCGAGTTGGAATTATTAGTACTTTTCCATTCAGTGTAATCGAGAAATAAACAATGTAAAATATGAT ] [+] EMBL OSS3960A [ TCGGCCGCCGGCGCGAAGAACATGGAGTCCGTGGTGGTGGCCGGAGATCTGGCCGCTGCACCGGCGCCTGCGACGCCANTNGTGGTTCGTGGCGCTGGTCGCCGTCGGCCTGCACGCGGCGGTCGTNTGGGCGGGGACGTTCCTCGCGTGGCTCCGCCGCG GTNTCCTCCGGCCCGGGAAGGG CTGTCCCGGCGGTACGGCGAGTGGGCGGTGGTCANCGGNGCCACCGACGGCATCGGACGCGCGNTGGCNCTGGAGCTGGCTCNCCGCGGGCTCCACCTCGTGCTCGTNGGGCGGAACCCCGGNAAGCTGTCGGGCGTCTNGAAAAAAGGTCCGCGCA ] [+] EMBL OSS3390A [ TCGGCCGCCGGCGCGAAGAACATGGAGTCCGTGGTGGTGGCCGGAGATCTGGCCGCTGCACCGGCGCCGGCGACGCCGAT GTGGTTCGTGGCGCTGGTCGNCGTCGGCCTGCACGCGGCGGTCGTGTGGGCGGGGACGTTCCTCGCGTGGCTCCGNCGCGCGT TCCTCCGGCCCGGGAAGGGCCTGTGCCGGCGGTACGGCGAGTGGGCGGTGGTCACCGGCGTCACCGACGGCATCGGACGCGCGGTGGCGCTGGAGCTGGCTCGNCGCGGGCTCCACCTCGTGCTCGTGGGG ] [+] EMBL AU174309 [ CCCTACTGGCGCCACTCGATCCAGTGGTTCTTTGCATCTCTACTGCCAGATTCTGTTCTGAATCTATGGCGTCTCCAGGTTGGAATCCGGAAGAGAAATCAGATGAAGGTTCTGCTTGGTGAGAGC GAT CA TGGATTCAGTT A AAC TG CCAT AAATG TTGGTTTTG TG AAGTG TG TGTTAATCTATT CGAACAAA ATAGTATATACATCAATCTGGGATTTGGGTAGTAGTATATACTTCGATGAGTTATGTGCTGAATATAATGGAATGGCATTTAGTGTTTGTTTTGAACTTTGGGTAGTGGTTTTGTTTGCACCTCTAGCACTATTTTTTATTGGTTTGTGCGAGTTGGAATTATTAGTACTTTTCCATTCAGTGTAATCGAGAAATAAACAATGTAAAATATGATGATGAATCTTAGTATTCCCTCCAAAAAA] [+] EMBL AU097285 [ cgGAGCTGATCCATTGGATTCAGTTTCAGAACTTGCCCATAAAATGNTGGGTTTNGTTGAAAGTGCTGTTGTTAATCTATTCCGAACAAANATAGTATATACATCAATCTGGGATTTGGGTAGTAGTATATACTTCGATGAGTTATGTGCTGAATATAATGGAATGGCATTTAGTGTTTGTTTTGAACTTTGGGTAGTGGTTTTGTTTGCACCTCTAGCACTATTTTTTATTGGTTTGTGCGAGTTGGAATTATTAGTACTTTTCCATTCAGTGTAATCGAGAAATAAACAATGTAAAATATGATGATGAATCTTAGTATTCCCTCCAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||