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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8720#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1380 fasta sequence
[GCCCGGCCGCCACACACGCCTCTCTAGCTACCCGGCGCCCGTTCGAGTAGCCTGTAGGCGCGTGGCGTCGTAATGGCCGTGGCGCCCGTCCGGCTCGTGGCGTGCATTGTCGCCCTGGCCGCCGTGGCGCCGGGCGGAGTGGCGGGGCACACACGGGGCGTGCGGCCAGGGAGGGCGGCGGGGAAGCAGCAGCCGTCGTTCCCGGAGAACGCGACGCGGGTGGAGGCGATCGAGCGGCAGTTCATGGAGTGGGTACGGTACATGGGCGGGCTGGAGCACAGCACGGTCCACCACGCGCTCGCCCGGGCGTTCCCCTCCTACTCGCTCGTCGTCGACAAGAACCCGGCGTTCGGCGACTTCACCACCATCCAGGCCGCCGTCGACTCGCTCCCGATCATCAACCTCGTCCGCGTCGTCATCAAGGTCAACGCCGGCACCTACACGGAGAAGGTGAACATATCGCCGATGCGCGCGTTCATCACCCTCGAGGGCGCCGGCGCCGACAAGACGATCGTGCAGTGGGGTGACACCGCGGACAGTCCGTCCGGCCGGGCGGGACGGCCGCTCGGCACATACAGCTCCGCGTCGTTCGCCGTGAACGCGCAGTACTTCCTCGCCAGGAACATCACTTTCAAGAACACGTCGCCGGTGCCGAAGCCGGGGGCGTCGGGGAAGCAGGCGGTGGCGCTGCGGGTGTCGGCGGACAACGCGGCGTTCGTGGGGTGCAGGTTCCTGGGCGCGCAGGACACGCTGTACGATCACTCGGGCCGGCACTACTACAAGGAATGCTACATCGAAGGCTCCGTGGATTTCATCTTTGGCAATGCGCTCTCTCTGTTTGAGGATTGCCACGTGCATGCGATCGCGCGGGACTACGGCGCGCTGACAGCGCAGAACCGGCAGAGCATGCTGGAGGACACGGGGTTCTCGTTCGTCAACTGCCGGGTGACGGGATCCGGCGCGCTCTACCTCGGCCGCGCCTGGGGCACCTTCTCCCGCGTCGTCTTCGCCTACACCTACATGGACGACATCATCATCCCCCGTGGCTGGTACAACTGGGGCGACCCCAACCGCGAGCTGTAAGACATCTCATCGCTCTCTCCGAACTTATCTGTGAAGCTGCTAGCCTGTTACGTGCGATCAGAGTGAAGTTTGTAGAAACAGTTTTGTATGTACAGAAGCAAAGTCACTTTAATTCCCTAGCCAACCGAAAGCCGCATCGGTGTTGCACTGTTGGTCTGTTGCTGTTTGCAAAAGCTCGGTGTAGCTAGGCGCATGGCCGTGTGCGCAGAGAAGAATCGTAGACATAGCTTCCATATCAATAATTTGCCAGTGCACGGGAAAAGGGAGAGCACTCTCCCCTTCTCGGTGCATGGCGTT]
[+] EMBL AK109798 [GCCCGGCCGCCACACACGCCTCTCTAGCTACCCGGCGCCCGTTCGAGTAGCCTGTAGGCGCGTGGCGTCGTAATGGCCGTGGCGCCCGTCCGGCTCGTGGCGTGCATTGTCGCCCTGGCCGCCGTGGCGCCGGGCGGAGTGGCGGGGCACACACGGGGCGTGCGGCCAGGGAGGGCGGCGGGGAAGCAGCAGCCGTCGTTCCCGGAGAACGCGACGCGGGTGGAGGCGATCGAGCGGCAGTTCATGGAGTGGGTACGGTACATGGGCGGGCTGGAGCACAGCACGGTCCACCACGCGCTCGCCCGGGCGTTCCCCTCCTACTCGCTCGTCGTCGACAAGAACCCGGCGTTCGGCGACTTCACCACCATCCAGGCCGCCGTCGACTCGCTCCCGATCATCAACCTCGTCCGCGTCGTCATCAAGGTCAACGCCGGCACCTACACGGAGAAGGTGAACATATCGCCGATGCGCGCGTTCATCACCCTCGAGGGCGCCGGCGCCGACAAGACGATCGTGCAGTGGGGTGACACCGCGGACAGTCCGTCCGGCCGGGCGGGACGGCCGCTCGGCACATACAGCTCCGCGTCGTTCGCCGTGAACGCGCAGTACTTCCTCGCCAGGAACATCACTTTCAAGAACACGTCGCCGGTGCCGAAGCCGGGGGCGTCGGGGAAGCAGGCGGTGGCGCTGCGGGTGTCGGCGGACAACGCGGCGTTCGTGGGGTGCAGGTTCCTGGGCGCGCAGGACACGCTGTACGATCACTCGGGCCGGCACTACTACAAGGAATGCTACATCGAAGGCTCCGTGGATTTCATCTTTGGCAATGCGCTCTCTCTGTTTGAGGATTGCCACGTGCATGCGATCGCGCGGGACTACGGCGCGCTGACAGCGCAGAACCGGCAGAGCATGCTGGAGGACACGGGGTTCTCGTTCGTCAACTGCCGGGTGACGGGATCCGGCGCGCTCTACCTCGGCCGCGCCTGGGGCACCTTCTCCCGCGTCGTCTTCGCCTACACCTACATGGACGACATCATCATCCCCCGTGGCTGGTACAACTGGGGCGACCCCAACCGCGAGCTGTAAGACATCTCATCGCTCTCTCCGAACTTATCTGTGAAGCTGCTAGCCTGTTACGTGCGATCAGAGTGAAGTTTGTAGAAACAGTTTTGTATGTACAGAAGCAAAGTCACTTTAATTCCCTAGCCAACCGAAAGCCGCATCGGTGTTGCACTGTTGGTCTGTTGCTGTTTGCAAAAGCTCGGTGTAGCTAGGCGCATGGCCGTGTGCGCAGAGAAGAATCGTAGACATAGCTTCCATATCAATAATTTGCCAGTGCACGGGAAAAGGGAGAGCACTCTCCCCTTCTCGGTGCATGGCGTT]
consensusID : consensus_8720#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1342 fasta sequence
[GGCGGTGTCCGTGTCGTGGTCGTGGGCGCCGCGGTTCTTGGCCTGCGTCGCGGTGGCGGTGTTGCTTGTTACGTCGGGTTTGGGCGGTGCGGCCGCCGGCGGCGGCGGGCGACGCCATGGGCACACGAAGGGGTTGCGGCCGGGGAAGGCGGCGGCGAAGCCGTACTATCCGGTGAACGCGACGGCGGTGGAGGCGATCGAGCGGCAGTTCACGCGGTGGGTGCGGTCCATGGTCGGGCGACGCCACAGCACGTTCCAGCGCGCGCTCTACCGCGGGCTGCTGCCCACGCGCACCCTCGTCGTCGACAAGAACCCCGCCGCCGGCAACTTCACGTCCATCCAGGCCGCCGTCGACTCGATCCCGCTCATCAACCTCGCCCGCGTCGTCATCAAGGTCAATGCCGGCACATACACTGAGAAGGTGACCATCTCGCCGCTCCGCGCGTTCGTGACCATCGAGGGCGCCGGCGCGGACAAGACGGTGGTGCAGTGGGGCGACACGGCCGACACGGTCGGCCCGCTCGGGCGCCCCTTCGGCACCTTCGCCTCCGCCACGTTCGCCGTCAACGCGCAGTTCTTCGTCGCCAAGAACATCACCTTCAAGAACACGGCGCCGGTGCCGAGGCCGGGGGCGCTGGGGAAGCAGGGTGTGGCGCTGCGGATATCGGCGGACAACGCGGCGTTCTTGGGGTGCAACTTCCTCGGCGCGCAGGACACGCTGTACGACCACCTCGGCCGCCATTACTACAGAGACTGCTACATCGAGGGCTCCGTCGACTTCATATTCGGCAACGCCCTCTCTCTCTACGAGGGATGTCACGTGCACGCGATCGCGCGGAACTACGGAGCCCTGACGGCTCAGAACCGGATGAGCATCCTGGAGGACACGGGTTTCTCGTTCGTCAACTGCCGCGTGACGGGCTCCGGCGCCCTCTACCTCGGCCGCGCCTGGGGCACCTTCTCCCGCGTCGTCTTCGCCTACACCTACATGGACAACATCATCATCCCCCGCGGCTGGTACAACTGGGGCGATCCCACCCGCGAGATGACGGTGTTCTACGGGCAGTACAAGTGCACGGGGCCGGGTTCGAACTACGCCGGGAGGGTGGCGTGGTCGAGGGAGCTCACGGACCAGGAGGCCAAGCCGTTCATCTCCCTCAGCTTCATCGACGGGTTGGAGTGGGTCAAGTTGTAGCACCACGTAGGAGAGAAACACAGCTCACTCGACTATTAGTTAACTTGTGAAGAGAAAAGAATAGAACAGAAGAAGTGGCAGATAAACACTCTGATTTGATTCGATTGCAGATTTCAACTTTGCAGTTGCATTGTGAGANAAAAAAAA]
[+] EMBL AK063238 [GGCGGTGTCCGTGTCGTGGTCGTGGGCGCCGCGGTTCTTGGCCTGCGTCGCGGTGGCGGTGTTGCTTGTTACGTCGGGTTTGGGCGGTGCGGCCGCCGGCGGCGGCGGGCGACGCCATGGGCACACGAAGGGGTTGCGGCCGGGGAAGGCGGCGGCGAAGCCGTACTATCCGGTGAACGCGACGGCGGTGGAGGCGATCGAGCGGCAGTTCACGCGGTGGGTGCGGTCCATGGTCGGGCGACGCCACAGCACGTTCCAGCGCGCGCTCTACCGCGGGCTGCTGCCCACGCGCACCCTCGTCGTCGACAAGAACCCCGCCGCCGGCAACTTCACGTCCATCCAGGCCGCCGTCGACTCGATCCCGCTCATCAACCTCGCCCGCGTCGTCATCAAGGTCAATGCCGGCACATACACTGAGAAGGTGACCATCTCGCCGCTCCGCGCGTTCGTGACCATCGAGGGCGCCGGCGCGGACAAGACGGTGGTGCAGTGGGGCGACACGGCCGACACGGTCGGCCCGCTCGGGCGCCCCTTCGGCACCTTCGCCTCCGCCACGTTCGCCGTCAACGCGCAGTTCTTCGTCGCCAAGAACATCACCTTCAAGAACACGGCGCCGGTGCCGAGGCCGGGGGCGCTGGGGAAGCAGGGTGTGGCGCTGCGGATATCGGCGGACAACGCGGCGTTCTTGGGGTGCAACTTCCTCGGCGCGCAGGACACGCTGTACGACCACCTCGGCCGCCATTACTACAGAGACTGCTACATCGAGGGCTCCGTCGACTTCATATTCGGCAACGCCCTCTCTCTCTACGAGGGATGTCACGTGCACGCGATCGCGCGGAACTACGGAGCCCTGACGGCTCAGAACCGGATGAGCATCCTGGAGGACACGGGTTTCTCGTTCGTCAACTGCCGCGTGACGGGCTCCGGCGCCCTCTACCTCGGCCGCGCCTGGGGCACCTTCTCCCGCGTCGTCTTCGCCTACACCTACATGGACAACATCATCATCCCCCGCGGCTGGTACAACTGGGGCGATCCCACCCGCGAGATGACGGTGTTCTACGGGCAGTACAAGTGCACGGGGCCGGGTTCGAACTACGCCGGGAGGGTGGCGTGGTCGAGGGAGCTCACGGACCAGGAGGCCAAGCCGTTCATCTCCCTCAGCTTCATCGACGGGTTGGAGTGGGTCAAGTTGTAGCACCACGTAGGAGAGAAACACAGCTCACTCGACTATTAGTTAACTTGTGAAGAGAAAAGAATAGAACAGAAGAAGTGGCAGATAAACACTCTGATTTGATTCGATTGCAGATTTCAACTTTGCAGTTGC ]
[+] EMBL AU089732 [ GACAACATCATCANCCCCCGCGGCTGGTACAACTGGGGCGATCCCACCCGCGAGATGACGGTGTTCTACGGGCAGTACAAGTGCACGGGGCCGGGTTCGAACTACGCCGGGANGGTGGCGTGGTCGANGGANCTCACGGACCAGGAGGCCAANCCGTTCATCTCCCTCAGCTTCATCGACGGGTTGGANTGGGTCAANTTGTAGCACCACGTAGGANAGAAACACNGCTCACTCGACTATTAGTTAACTTGTGAAGAGAAAAGAATAGNACAGAANAANTGGCAGATAAACACTCTGATTTGANTCGATTGCANATTTCAACTTTGCAGTTGCATTGTGAGANAAAAAAAA]
consensusID : consensus_8720#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1332 fasta sequence
[GCCCGGCCGCCACACACGCCTCTCTAGCTACCCGGCGCCCGTTCGAGTAGCCTGTAGGCGCGTGGCGTCGTAATGGCCGTGGCGCCCGTCCGGCTCGTGGCGTGCATTGTCGCCCTGGCCGCCGTGGCGCCGGGCGGAGTGGCGGGGCACACACGGGGCGTGCGGCCAGGGAGGGCGGCGGGGAAGCAGCAGCCGTCGTTCCCGGAGAACGCGACGCGGGTGGAGGCGATCGAGCGGCAGTTCATGGAGTGGGTACGGTACATGGGCGGGCTGGAGCACAGCACGGTCCACCACGCGCTCGCCCGGGCGTTCCCCTCCTACTCGCTCGTCGTCGACAAGAACCCGGCGTTCGGCGACTTCACCACCATCCAGGCCGCCGTCGACTCGCTCCCGATCATCAACCTCGTCCGCGTCGTCATCAAGGTCAACGCCGGCACCTACACGGAGAAGGTGAACATATCGCCGATGCGCGCGTTCATCACCCTCGAGGGCGCCGGCGCCGACAAGACGATCGTGCAGTGGGGTGACACCGCGGACAGTCCGTCCGGCCGGGCGGGACGGCCGCTCGGCACATACAGCTCCGCGTCGTTCGCCGTGAACGCGCAGTACTTCCTCGCCAGGAACATCACTTTCAAGAACACGTCGCCGGTGCCGAAGCCGGGGGCGTCGGGGAAGCAGGCGGTGGCGCTGCGGGTGTCGGCGGACAACGCGGCGTTCGTGGGGTGCAGGTTCCTGGGCGCGCAGGACACGCTGTACGATCACTCGGGCCGGCACTACTACAAGGAATGCTACATCGAAGGCTCCGTGGATTTCATCTTTGGCAATGCGCTCTCTCTGTTTGAGGATTGCCACGTGCATGCGATCGCGCGGGACTACGGCGCGCTGACAGCGCAGAACCGGCAGAGCATGCTGGAGGACACGGGGTTCTCGTTCGTCAACTGCCGGGTGACGGGATCCGGCGCGCTCTACCTCGGCCGCGCCTGGGGCACCTTCTCCCGCGTCGTCTTCGCCTACACCTACATGGACGACATCATCATCCCCCGTGGCTGGTACAACTGGGGCGACCCCAACCGCGAGCTGACGGTGTTCTACGGGCAGTACAAGTGCACGGGCCCCGGCGCGAGCTTCTCCGGCAGGGTGTCGTGGTCACGCGAGCTCACCGACGAGGAGGCCAAGCCCTTCATCTCGCTCACCTTCATCGACGGCACGGAATGGGTCAGGTTGTGAGAGATCGATCCATCGGTCGATCGAGTTCATTGTAGCACACCGCACACGGCATCATAGCGTCACACGATGTAAAAAGAAAAACAGACGAATATATATACAGATTCA]
[+] EMBL AK105996 [GCCCGGCCGCCACACACGCCTCTCTAGCTACCCGGCGCCCGTTCGAGTAGCCTGTAGGCGCGTGGCGTCGTAATGGCCGTGGCGCCCGTCCGGCTCGTGGCGTGCATTGTCGCCCTGGCCGCCGTGGCGCCGGGCGGAGTGGCGGGGCACACACGGGGCGTGCGGCCAGGGAGGGCGGCGGGGAAGCAGCAGCCGTCGTTCCCGGAGAACGCGACGCGGGTGGAGGCGATCGAGCGGCAGTTCATGGAGTGGGTACGGTACATGGGCGGGCTGGAGCACAGCACGGTCCACCACGCGCTCGCCCGGGCGTTCCCCTCCTACTCGCTCGTCGTCGACAAGAACCCGGCGTTCGGCGACTTCACCACCATCCAGGCCGCCGTCGACTCGCTCCCGATCATCAACCTCGTCCGCGTCGTCATCAAGGTCAACGCCGGCACCTACACGGAGAAGGTGAACATATCGCCGATGCGCGCGTTCATCACCCTCGAGGGCGCCGGCGCCGACAAGACGATCGTGCAGTGGGGTGACACCGCGGACAGTCCGTCCGGCCGGGCGGGACGGCCGCTCGGCACATACAGCTCCGCGTCGTTCGCCGTGAACGCGCAGTACTTCCTCGCCAGGAACATCACTTTCAAGAACACGTCGCCGGTGCCGAAGCCGGGGGCGTCGGGGAAGCAGGCGGTGGCGCTGCGGGTGTCGGCGGACAACGCGGCGTTCGTGGGGTGCAGGTTCCTGGGCGCGCAGGACACGCTGTACGATCACTCGGGCCGGCACTACTACAAGGAATGCTACATCGAAGGCTCCGTGGATTTCATCTTTGGCAATGCGCTCTCTCTGTTTGAGGATTGCCACGTGCATGCGATCGCGCGGGACTACGGCGCGCTGACAGCGCAGAACCGGCAGAGCATGCTGGAGGACACGGGGTTCTCGTTCGTCAACTGCCGGGTGACGGGATCCGGCGCGCTCTACCTCGGCCGCGCCTGGGGCACCTTCTCCCGCGTCGTCTTCGCCTACACCTACATGGACGACATCATCATCCCCCGTGGCTGGTACAACTGGGGCGACCCCAACCGCGAGCTGACGGTGTTCTACGGGCAGTACAAGTGCACGGGCCCCGGCGCGAGCTTCTCCGGCAGGGTGTCGTGGTCACGCGAGCTCACCGACGAGGAGGCCAAGCCCTTCATCTCGCTCACCTTCATCGACGGCACGGAATGGGTCAGGTTGTGAGAGATCGATCCATCGGTCGATCGAGTTCATTGTAGCACACCGCACACGGCATCATAGCGTCACACGATGTAAAAAGAAAAACAGACGAATATATATACAG ]
[+] EMBL AK073604 [ GGCCGCCACACACGCCTCTCTAGCTACCCGGCGCCCGTTCGAGTAGCCTGTAGGCGCGTGGCGTCGTAATGGCCGTGGCGCCCGTCCGGCTCGTGGCGTGCATTGTCGCCCTGGCCGCCGTGGCGCCGGGCGGAGTGGCGGGGCACACACGGGGCGTGCGGCCAGGGAGGGCGGCGGGGAAGCAGCAGCCGTCGTTCCCGGAGAACGCGACGCGGGTGGAGGCGATCGAGCGGCAGTTCATGGAGTGGGTACGGTACATGGGCGGGCTGGAGCACAGCACGGTCCACCACGCGCTCGCCCGGGCGTTCCCCTCCTACTCGCTCGTCGTCGACAAGAACCCGGCGTTCGGCGACTTCACCACCATCCAGGCCGCCGTCGACTCGCTCCCGATCATCAACCTCGTCCGCGTCGTCATCAAGGTCAACGCCGGCACCTACACGGAGAAGGTGAACATATCGCCGATGCGCGCGTTCATCACCCTCGAGGGCGCCGGCGCCGACAAGACGATCGTGCAGTGGGGTGACACCGCGGACAGTCCGTCCGGCCGGGCGGGACGGCCGCTCGGCACATACAGCTCCGCGTCGTTCGCCGTGAACGCGCAGTACTTCCTCGCCAGGAACATCACTTTCAAGAACACGTCGCCGGTGCCGAAGCCGGGGGCGTCGGGGAAGCAGGCGGTGGCGCTGCGGGTGTCGGCGGACAACGCGGCGTTCGTGGGGTGCAGGTTCCTGGGCGCGCAGGACACGCTGTACGATCACTCGGGCCGGCACTACTACAAGGAATGCTACATCGAAGGCTCCGTGGATTTCATCTTTGGCAATGCGCTCTCTCTGTTTGAGGATTGCCACGTGCATGCGATCGCGCGGGACTACGGCGCGCTGACAGCGCAGAACCGGCAGAGCATGCTGGAGGACACGGGGTTCTCGTTCGTCAACTGCCGGGTGACGGGATCCGGCGCGCTCTACCTCGGCCGCGCCTGGGGCACCTTCTCCCGCGTCGTCTTCGCCTACACCTACATGGACGACATCATCATCCCCCGTGGCTGGTACAACTGGGGCGACCCCAACCGCGAGCTGACGGTGTTCTACGGGCAGTACAAGTGCACGGGCCCCGGCGCGAGCTTCTCCGGCAGGGTGTCGTGGTCACGCGAGCTCACCGACGAGGAGGCCAAGCCCTTCATCTCGCTCACCTTCATCGACGGCACGGAATGGGTCAGGTTGTGAGAGATCGATCCATCGGTCGATCGAGTTCATTGTAGCACACCGCACACGGCATCATAGCGTCACACGATGTAAAAAGAAAAACAGACGAATATATATACAGATTCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8720#0 GCCCGGCCGCCACACACGCCTCTCTAGCTACCCGGCGCCCGTTCGAGTAGCCTGTAGGCG 60
consensus_8720#2 GCCCGGCCGCCACACACGCCTCTCTAGCTACCCGGCGCCCGTTCGAGTAGCCTGTAGGCG 60
consensus_8720#1 -------------------GGCGGTGTCCGTGTCGTGGTCGTGGGCGCCGCGGTTCTTGG 41
* * * * * *** * * ** * *
consensus_8720#0 CGTGGCGTCGTAATGGCCGTGGCGCCCGTCCGGCTCGTGGCGTGCATTGTCGCCCTGGCC 120
consensus_8720#2 CGTGGCGTCGTAATGGCCGTGGCGCCCGTCCGGCTCGTGGCGTGCATTGTCGCCCTGGCC 120
consensus_8720#1 CCTG-CGTCGCGGTGGCGGTGTTGCTTGTT------ACGTCGGGTTTGGGCGGTGCGGCC 94
* ** ***** **** *** ** ** * ** * * * ** ****
consensus_8720#0 GCCG-TGGCGCCGGGCGGAGTGGCGGGGCACACACGGGGCGTGCGGCCAGGGAGGGCGGC 179
consensus_8720#2 GCCG-TGGCGCCGGGCGGAGTGGCGGGGCACACACGGGGCGTGCGGCCAGGGAGGGCGGC 179
consensus_8720#1 GCCGGCGGCGGCGGGCGACGCCATGGG-CACACGAAGGGGTTGCGGCCGGGGAAGGCGGC 153
**** **** ****** * *** ***** *** ******* **** ******
consensus_8720#0 GGGGAAGCAGCAGCCGTCGTTCCCGGAGAACGCGACGCGGGTGGAGGCGATCGAGCGGCA 239
consensus_8720#2 GGGGAAGCAGCAGCCGTCGTTCCCGGAGAACGCGACGCGGGTGGAGGCGATCGAGCGGCA 239
consensus_8720#1 GGCGAAGC------CGTACTATCCGGTGAACGCGACGGCGGTGGAGGCGATCGAGCGGCA 207
** ***** *** * **** ********** *********************
consensus_8720#0 GTTCATGGAGTGGGTACGGTACATGGGCGGGCTGGAGCACAGCACGGTCCACCACGCGCT 299
consensus_8720#2 GTTCATGGAGTGGGTACGGTACATGGGCGGGCTGGAGCACAGCACGGTCCACCACGCGCT 299
consensus_8720#1 GTTCACGCGGTGGGTGCGGTCCATGGTCGGGCGACGCCACAGCACGTTCCAGCGCGCGCT 267
***** * ****** **** ***** ***** ********* **** * ******
consensus_8720#0 CGCCCGGG---CGTTCCCCTCCTACTCGCTCGTCGTCGACAAGAACCCGGCGTTCGGCGA 356
consensus_8720#2 CGCCCGGG---CGTTCCCCTCCTACTCGCTCGTCGTCGACAAGAACCCGGCGTTCGGCGA 356
consensus_8720#1 CTACCGCGGGCTGCTGCCCACGCGCACCCTCGTCGTCGACAAGAACCCCGCCGCCGGCAA 327
* *** * * * *** * * * ******************** ** **** *
consensus_8720#0 CTTCACCACCATCCAGGCCGCCGTCGACTCGCTCCCGATCATCAACCTCGTCCGCGTCGT 416
consensus_8720#2 CTTCACCACCATCCAGGCCGCCGTCGACTCGCTCCCGATCATCAACCTCGTCCGCGTCGT 416
consensus_8720#1 CTTCACGTCCATCCAGGCCGCCGTCGACTCGATCCCGCTCATCAACCTCGCCCGCGTCGT 387
****** *********************** ***** ************ *********
consensus_8720#0 CATCAAGGTCAACGCCGGCACCTACACGGAGAAGGTGAACATATCGCCGATGCGCGCGTT 476
consensus_8720#2 CATCAAGGTCAACGCCGGCACCTACACGGAGAAGGTGAACATATCGCCGATGCGCGCGTT 476
consensus_8720#1 CATCAAGGTCAATGCCGGCACATACACTGAGAAGGTGACCATCTCGCCGCTCCGCGCGTT 447
************ ******** ***** ********** *** ****** * ********
consensus_8720#0 CATCACCCTCGAGGGCGCCGGCGCCGACAAGACGATCGTGCAGTGGGGTGACACCGCGGA 536
consensus_8720#2 CATCACCCTCGAGGGCGCCGGCGCCGACAAGACGATCGTGCAGTGGGGTGACACCGCGGA 536
consensus_8720#1 CGTGACCATCGAGGGCGCCGGCGCGGACAAGACGGTGGTGCAGTGGGGCGACACGGCCGA 507
* * *** **************** ********* * *********** ***** ** **
consensus_8720#0 CAGTCCGTCCGGCCGGGCGGGACGGCCGCTCGGCACATACAGCTCCGCGTCGTTCGCCGT 596
consensus_8720#2 CAGTCCGTCCGGCCGGGCGGGACGGCCGCTCGGCACATACAGCTCCGCGTCGTTCGCCGT 596
consensus_8720#1 CA---CGGTCGGCCCGCTCGGGCGCCCCTTCGGCACCTTCGCCTCCGCCACGTTCGCCGT 564
** ** ***** * ** ** ** ******* * * ****** **********
consensus_8720#0 GAACGCGCAGTACTTCCTCGCCAGGAACATCACTTTCAAGAACACGTCGCCGGTGCCGAA 656
consensus_8720#2 GAACGCGCAGTACTTCCTCGCCAGGAACATCACTTTCAAGAACACGTCGCCGGTGCCGAA 656
consensus_8720#1 CAACGCGCAGTTCTTCGTCGCCAAGAACATCACCTTCAAGAACACGGCGCCGGTGCCGAG 624
********** **** ****** ********* ************ ************
consensus_8720#0 GCCGGGGGCGTCGGGGAAGCAGGCGGTGGCGCTGCGGGTGTCGGCGGACAACGCGGCGTT 716
consensus_8720#2 GCCGGGGGCGTCGGGGAAGCAGGCGGTGGCGCTGCGGGTGTCGGCGGACAACGCGGCGTT 716
consensus_8720#1 GCCGGGGGCGCTGGGGAAGCAGGGTGTGGCGCTGCGGATATCGGCGGACAACGCGGCGTT 684
********** *********** ************ * ********************
consensus_8720#0 CGTGGGGTGCAGGTTCCTGGGCGCGCAGGACACGCTGTACGATCACTCGGGCCGGCACTA 776
consensus_8720#2 CGTGGGGTGCAGGTTCCTGGGCGCGCAGGACACGCTGTACGATCACTCGGGCCGGCACTA 776
consensus_8720#1 CTTGGGGTGCAACTTCCTCGGCGCGCAGGACACGCTGTACGACCACCTCGGCCGCCATTA 744
* ********* ***** *********************** *** ***** ** **
consensus_8720#0 CTACAAGGAATGCTACATCGAAGGCTCCGTGGATTTCATCTTTGGCAATGCGCTCTCTCT 836
consensus_8720#2 CTACAAGGAATGCTACATCGAAGGCTCCGTGGATTTCATCTTTGGCAATGCGCTCTCTCT 836
consensus_8720#1 CTACAGAGACTGCTACATCGAGGGCTCCGTCGACTTCATATTCGGCAACGCCCTCTCTCT 804
***** ** *********** ******** ** ***** ** ***** ** ********
consensus_8720#0 GTTTGAGGATTGCCACGTGCATGCGATCGCGCGGGACTACGGCGCGCTGACAGCGCAGAA 896
consensus_8720#2 GTTTGAGGATTGCCACGTGCATGCGATCGCGCGGGACTACGGCGCGCTGACAGCGCAGAA 896
consensus_8720#1 CTACGAGGGATGTCACGTGCACGCGATCGCGCGGAACTACGGAGCCCTGACGGCTCAGAA 864
* **** ** ******** ************ ******* ** ***** ** *****
consensus_8720#0 CCGGCAGAGCATGCTGGAGGACACGGGGTTCTCGTTCGTCAACTGCCGGGTGACGGGATC 956
consensus_8720#2 CCGGCAGAGCATGCTGGAGGACACGGGGTTCTCGTTCGTCAACTGCCGGGTGACGGGATC 956
consensus_8720#1 CCGGATGAGCATCCTGGAGGACACGGGTTTCTCGTTCGTCAACTGCCGCGTGACGGGCTC 924
**** ****** ************** ******************** ******** **
consensus_8720#0 CGGCGCGCTCTACCTCGGCCGCGCCTGGGGCACCTTCTCCCGCGTCGTCTTCGCCTACAC 1016
consensus_8720#2 CGGCGCGCTCTACCTCGGCCGCGCCTGGGGCACCTTCTCCCGCGTCGTCTTCGCCTACAC 1016
consensus_8720#1 CGGCGCCCTCTACCTCGGCCGCGCCTGGGGCACCTTCTCCCGCGTCGTCTTCGCCTACAC 984
****** *****************************************************
consensus_8720#0 CTACATGGACGACATCATCATCCCCCGTGGCTGGTACAACTGGGGCGACCCCAACCGCGA 1076
consensus_8720#2 CTACATGGACGACATCATCATCCCCCGTGGCTGGTACAACTGGGGCGACCCCAACCGCGA 1076
consensus_8720#1 CTACATGGACAACATCATCATCCCCCGCGGCTGGTACAACTGGGGCGATCCCACCCGCGA 1044
********** **************** ******************** **** ******
consensus_8720#0 GCTGTAAGACATCTCATCGCTCTCTCCGAACTTATCTGTGAAGCTGCTAGCCTGTTACGT 1136
consensus_8720#2 GCTG-ACGGTGTTCTA-CGGGCAGTACAAGTGCACGGGCCCCGGCGCGAGCTTCTCCGG- 1133
consensus_8720#1 GATG-ACGGTGTTCTA-CGGGCAGTACAAGTGCACGGGGCCGGGTTCGAACTACGCCGG- 1101
* ** * * * * ** * * * * * * * * * * *
consensus_8720#0 GCGATCAGAGTGAAGTTTGTAGAAACAGTTTTGTATGTACAGAAGCAAAGTCACTTTAAT 1196
consensus_8720#2 -----CAGGGTGTCGT--GGTCACGCGAGCTCACCGACGAGGAGGCCAAGCC-CTTCATC 1185
consensus_8720#1 -----GAGGGTGGCGT--GGTCGAGGGAGCTCACGGACCAGGAGGCCAAGCC-GTTCATC 1153
** *** ** * * ** ** *** * ** *
consensus_8720#0 TCCCTAGCCAACCGAAAGCCGCATCGGTGTTGCACTGTTGGTC----TGTTGCTGTTTGC 1252
consensus_8720#2 TCGCTCACC----------TTCATCGACGGCACGGAATGGGTC----AGGT------TGT 1225
consensus_8720#1 TCCCTCAGC----------TTCATCGACGGGTTGGAGTGGGTCAAGTTGTAGCACCACGT 1203
** ** * ***** * * **** * *
consensus_8720#0 AAAAGCTCGGTGTAGCTAGGCGCATGGCCGTGTGCGCAGAGAAGAATCGTAGACATAGCT 1312
consensus_8720#2 GAGAGATCGATCCAT-----CGGTCGATCGAGTTCATTGTAGCACACCGC--ACACGGCA 1278
consensus_8720#1 AGGAGAGAAACACAGCTCACTCGACTATTAGTTAACTTGTGAAGAGAAAAGAATAGAACA 1263
** * * * * * *
consensus_8720#0 TCCATATCAATAATTTGCCAGTGC-ACGGGAAAAGGGAGAGCACTCTCCCCTTCTCGGTG 1371
consensus_8720#2 TC-ATAGCG-TCACACGATGTAAA-AAGAAAAACAGACGAATATATATACAGATTCA--- 1332
consensus_8720#1 GAAGAAGTGGCAGATAAACACTCTGATTTGATTCGATTGCAGATTTCAACTTTGCAGTTG 1323
* * * * * *
consensus_8720#0 CATGGCGTT---------- 1380
consensus_8720#2 -------------------
consensus_8720#1 CATTGTGAGANAAAAAAAA 1342
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||