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Oryza sativa
cluster # 8725 cluster # 8725       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8725#0 length = 2251 sequences # 4  
consensus_8725#1 length = 800 sequences # 1  

consensusID : consensus_8725#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2251
fasta sequence
                              [CTCCCTCTTCCGCCGCCGCCTCCTCCTCCTCCGCATCGCCCATGGCGGGGGAAACCCTCTCCTCGTCGCCGCGGAAACCCTAAACCCTAGCTCGATTCCGGCGCCCATCGCGCTGCCGCGGAGGCAGAAGGACGGCGGAGGGGGTGGAGGGGGAGAGGAGCGGGTGCTGATCAGCGAGGTGGCGGTGAGGGGGAAGGACGGGGAGCCCCTGGAGCGGCCCGAGCTGGAGGCGGCCGCGGCGGCGGCGCTCCGGGCGTGCCGCCCCAACGCGGCGCTCACGGTGCGGGAGGTGCAGGAGGACGTGCACCGCGTCGTCGAGAGCGGCCTCTTCCGCTCCTGCATGCCCGTCGCCGTCGACACCCGTGACGGCATTCGTCTCGTCTTTGAGGTGGAGCCGAACCAGGACTTCCATGGGTTGGTCTGTGAGGGTGCCAACATGCTGCCATCTAAGTTCCTAGAGGACGCATTTCATGATCGCCATGGGAAAATAATCAATATAAGACATTTGGATCAAGTGATCAAGTCTGTTAATGGATGGTATCAGGAACGTGGTCTAACTGGCTTGGTTTCATATGCTGAGATTCTTTCTGGAGGAATTCTGAGGCTACAAGTTTCTGAAGCTGAGGTTAATAATATCAATATTCGCTTTCTGGATAGAAGAACTGGTGAACCAACTGTTGGGAAGACGCAACCAGAGACAATACTCCGTCACCTTACCACCAAGAAGGGTCAGGCTTACAATAGAGCACAAGTGAAAAGGGATGTTGAAACAATCCTTACTATGGGAATCATGGAGGATGTTACTATAATTCCACAGCCAGTTGGAGATTCTAATAAAGTTGATCTTGTCATGAATCTTGTTGAACGACCTTCGGGTGGTTTTTCTGCTGGTGGTGGCATTTCAAGTGGGATAACAAATGGACCACTTTCTGGGCTTATTGGCAGTTTTGCATATTCTCATCGAAATGTTTTTGGGAGGAACAAGAAGCTGAATCTCTCACTGGAGAGGGGGCAAATAGATTCTATATTTCGATTAAACTATACTGATCCTTGGATTGATGGTGACAATAAGAGGACCTCCAGAACTATCATGGTTCAGAACTCTAGGACTCCCGGAACACTTATCCATGGTGGGGACCATCCTGACCATGGGCCCATTACAATTGGACGAGTTACTGCTGGCATTGAATACAGTCGACCATTCAGACCTAAATGGAGTGGCACACTTGGATTAATATTTCAGCATGCTGGTGCTCGTGATGACAAAGGCAATCCTATCATCAGAGATTTCTATAACAGCCAATTAACTGCCAGCGGAAATGCTTATGATGATACACTACTAGCTAAGCTTGAAAGTGTCTACACAGACTCTGGAGATCGTAGCTCAACAATGTTCGTTTTCAACATTGAGCAAGGTCTTCCTATTCTTCCTGAGTGGCTCAGTTTTAACAGAGTGACAGCGCGTTTGAGGCAGGGCTATGAAATTGGCCCTGCTCGACTTCTTCTAAGTGCTTCTGGAGGTCATGTAGAGGGAAACTTTTCGCCTCATGAAGCATTTGCAATTGGTGGGACAAATAGTGTAAGAGGATATGAAGAAGGTGCTGTTGGTTCTGGCCGCTCATATGCTGTTGGTAGTGGAGAAGTCTCTTGCCGCATGTTTGGGCCATTGGAAGGTGTGGTGTTTGGTGACTATGGTAGTGATCTTAGTTCTGGTCCCAAAGTTCCTGGTGACCCAGCCGGAGCTCGTGGGAAGCCAGGAAGTGGTTACGGTTACGGTGTTGGCGTCCGTGTGGACTCCCCACTGGGACCTTTGCGTCTTGAGTATGCTTTCAATGATAAACAAGCAAGGCGATTTCATTTTGGGGTTGGCTACAGAAATTAACCAGAGTATCATTGTGTTTGTCGGCGTGATCCTTCATTTGATTAGCTGCTGTTAGGAGATAGTACCATTACTTCCATTTCTTTGCGGTATCAATATGTGAAAGCCTTTTGCAAAGCAAATTTTGTCTGTCCCAATTCCCTTATTGTAACATATTTGTACATTTTTTTCAATCCTCCCTCTTCTCATGTAGATGTTCTTGAAACTGAGGAGAAAATGATCCCACCAGGTAATTACTCATGACTTATGGTTGGGTGAAGTTCCCTGGGATAATTTAAACAAGTTTTGTCGTTGTCGTAGGACAAAATTTTGGATTTGTATCAATGTCACCATTTGTATTGTAATGTTAGCTGGAGAAATCTGAGCCTCTGC]

[+] EMBL AK066028             [CTCCCTCTTCCGCCGCCGCCTCCTCCTCCTCCGCATCGCCCATGGCGGGGGAAACCCTCTCCTCGTCGCCGCGGAAACCCTAAACCCTAGCTCGATTCCGGCGCCCATCGCGCTGCCGCGGAGGCAGAAGGACGGCGGAGGGGGTGGAGGGGGAGAGGAGCGGGTGCTGATCAGCGAGGTGGCGGTGAGGGGGAAGGACGGGGAGCCCCTGGAGCGGCCCGAGCTGGAGGCGGCCGCGGCGGCGGCGCTCCGGGCGTGCCGCCCCAACGCGGCGCTCACGGTGCGGGAGGTGCAGGAGGACGTGCACCGCGTCGTCGAGAGCGGCCTCTTCCGCTCCTGCATGCCCGTCGCCGTCGACACCCGTGACGGCATTCGTCTCGTCTTTGAGGTGGAGCCGAACCAGGACTTCCATGGGTTGGTCTGTGAGGGTGCCAACATGCTGCCATCTAAGTTCCTAGAGGACGCATTTCATGATCGCCATGGGAAAATAATCAATATAAGACATTTGGATCAAGTGATCAAGTCTGTTAATGGATGGTATCAGGAACGTGGTCTAACTGGCTTGGTTTCATATGCTGAGATTCTTTCTGGAGGAATTCTGAGGCTACAAGTTTCTGAAGCTGAGGTTAATAATATCAATATTCGCTTTCTGGATAGAAGAACTGGTGAACCAACTGTTGGGAAGACGCAACCAGAGACAATACTCCGTCACCTTACCACCAAGAAGGGTCAGGCTTACAATAGAGCACAAGTGAAAAGGGATGTTGAAACAATCCTTACTATGGGAATCATGGAGGATGTTACTATAATTCCACAGCCAGTTGGAGATTCTAATAAAGTTGATCTTGTCATGAATCTTGTTGAACGACCTTCGGGTGGTTTTTCTGCTGGTGGTGGCATTTCAAGTGGGATAACAAATGGACCACTTTCTGGGCTTATTGGCAGTTTTGCATATTCTCATCGAAATGTTTTTGGGAGGAACAAGAAGCTGAATCTCTCACTGGAGAGGGGGCAAATAGATTCTATATTTCGATTAAACTATACTGATCCTTGGATTGATGGTGACAATAAGAGGACCTCCAGAACTATCATGGTTCAGAACTCTAGGACTCCCGGAACACTTATCCATGGTGGGGACCATCCTGACCATGGGCCCATTACAATTGGACGAGTTACTGCTGGCATTGAATACAGTCGACCATTCAGACCTAAATGGAGTGGCACACTTGGATTAATATTTCAGCATGCTGGTGCTCGTGATGACAAAGGCAATCCTATCATCAGAGATTTCTATAACAGCCAATTAACTGCCAGCGGAAATGCTTATGATGATACACTACTAGCTAAGCTTGAAAGTGTCTACACAGACTCTGGAGATCGTAGCTCAACAATGTTCGTTTTCAACATTGAGCAAGGTCTTCCTATTCTTCCTGAGTGGCTCAGTTTTAACAGAGTGACAGCGCGTTTGAGGCAGGGCTATGAAATTGGCCCTGCTCGACTTCTTCTAAGTGCTTCTGGAGGTCATGTAGAGGGAAACTTTTCGCCTCATGAAGCATTTGCAATTGGTGGGACAAATAGTGTAAGAGGATATGAAGAAGGTGCTGTTGGTTCTGGCCGCTCATATGCTGTTGGTAGTGGAGAAGTCTCTTGCCGCATGTTTGGGCCATTGGAAGGTGTGGTGTTTGGTGACTATGGTAGTGATCTTAGTTCTGGTCCCAAAGTTCCTGGTGACCCAGCCGGAGCTCGTGGGAAGCCAGGAAGTGGTTACGGTTACGGTGTTGGCGTCCGTGTGGACTCCCCACTGGGACCTTTGCGTCTTGAGTATGCTTTCAATGATAAACAAGCAAGGCGATTTCATTTTGGGGTTGGCTACAGAAATTAACCAGAGTATCATTGTGTTTGTCGGCGTGATCCTTCATTTGATTAGCTGCTGTTAGGAGATAGTACCATTACTTCCATTTCTTTGCGGTATCAATATGTGAAAGCCTTTTGCAAAGCAAATTTTGTCTGTCCCAATTCCCTTATTGTAACATATTTGTACATTTTTTTCAATCCTCCCTCTTCTCATGTAGATGTTCTTGAAACTGAGGAGAAAATGATCCCACCAGGTAATTACTCATGACTTATGGTTGGGTGAAGTTCCCTGGGATAATTTAAACAAGTTTTGTCGTTGTCGTAGGACAAAATTTTGGATTTGTATCAATGTCACCATTTGTATTGTAATGTTAGCTGGAGAAATCTGAGCCTCTGC]
[+] EMBL CB658664             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTCGGGAAGACGCAACCAGAGACAATACTCCGTCACCTTACCACCAAGAAGGGTCAGGCTTACAATAGAGCACAAGTGAAAAGGGATGTTGAAACAATCCTTACTATGGGAATCATGGAGGATGTTACTATAATTCCACAGCCAGTTGGAGATTCTAATAAAGTTGATCTTGTCATGAATCTTGTTGAACGACCTTCGGGTGGTTTTTCTGCTGGTGGTGGCATTTCAAGTGGGATAACAAATGGACCACTTTCTGGGCTTATTGGCAGTTTTGCATATTCTCATCGAAATGTTTTTGGGAGGAACAAGAAGCTGAATCTCTCACTGGAGAGGGGGCAAATAGATTCTATATTTCGATTAAACTATACTGATCCTTGGATTGATGGTGACAATAAGAGGACCTCCAGAACTATCATGGTTCAGAACTCTAGGACTCCCGGAACACTTATCCATGGTGGGGACCATCCTGACCATGGGCCCATTACAATTGGACGAGTTACTGCTGGCATTGAATACAGTCGACCATTCAGACCTAAATGGAGTGGCACACTTGGATTAATATTTCAGCATGCTGGTGCTCGTGATGACAAAGGCAATCCTATCATCAGAGATTTCTATAACAGCCAATTAACTGCCAGCGGAAATGCTTATGATGATACACTACTAGCTAAGCTTGAAAGTGTCTACACAGACTCTGGAGAT  TAGCTCAACAATGTTCGTTTTCAACATTGAGCAAGGTCTTCCTATTCTTCCTGAGTGGCTCAGTTTTAACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB658665             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCACAAGTGAAACGGGATGTTGAAACAATCCTTACTATGGGAATCATGGAGGATGTTACTATAATTCCACAGCCAGTTGGAGATTCTAATAAAGTTGATCTTGTCATGAATCTTGTTGAACGACCTTCGGGTGGTTTTTCTGCTGGTGGTGGCATTTCAAGTGGGATAACAAATGGACCACTTTCTGGGCTTATTGGCAGTTTTGCATATTCTCATCGAAATGTTTTTGGGAGGAACAAGAAGCTGAATCTCTCACTGGAGAGGGGGCAAATAGATTCTATATTTCGATTAAACTATACTGATCCTTGGATTGATGGTGACAATAAGAGGACCTCCAGAACTATCATGGTTCAGAACTCTAGGACTCCCGGAACACTTATCCATGGTGGGGACCATCCTGACCATGGGCCCATTACAATTGGACGAGTTACTGCTGGCATTGAATACAGTCGACCATTCAGACCTAAATGGAGTGGCACACTTGGATTAATATTTCAGCATGCTGGTGCTCGTGATGACAAAGGCAATCCTATCATCAGAGATTTCTATAACAGCCAATTAACTGCCAGCGGAAATGCTTATGATGATACACTACTAGCTAAGCTTGAAAGTGTCTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB685698             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTGAGCAAGGTCTTCCTATTCTTCCTGAGTGGCTCAGTTTTAACAGAGTGACAGCGCGTTTGAGGCAGGGCTATGAAATTGGCCCTGCTCGACTTCTTCTAAGTGCTTCTGGAGGTCATGTAGAGGGAAACTTTTCGCCTCATGAAGCATTTGCAATTGGTGGGACAAATAGTGTAAGAGGATATGAAGAAGGTGCTGTTGGTTCTGGCCGCTCATATGCTGTTGGTAGTGGAGAAGTCTCTTGCCGCATGTTTGGGCCATTGGAAGGTGTGGTGTTTGGTGACTATGGTAGTGATCTTAGTTCTGGTCCCAAAGTTCCTGGTGACCCAGCCGGAGCTCGTGGGAAGCCAGGAAGTGGTTACGGTTACGGTGTTGGCGTCCGTGTGGACTCCCCACTGGGACCTTTGCGTCTTGAGTATGCTTTCAATGATAAACAAGCAAGGCGATTTCATTTTGGGGTTGGCTACAGAAATTAACCAGAGTATCATTGTGTTTGTCGGCGTGATCCTTCATTTGATTAGCTGCTGTTAGGAGATAGTACCATTACTTCCATTTCTTTGCGGTATCAATATGTGAAAGCCTTTTGCAAAGCAAATTTTGTCTGTCCCAATTCCCTTATTGTAACATATTTGTACATTTTTTTCAATCCTCCCTCTTCTCATGTAGATGTTCTTGAAACTGAGGAGAAAATGATCCCACCAGGTAATTACTCATGACTTATGGTTGGGTGAAGTTCCCTGGGATAATTTAAACAAGTTTTGTCGTTGTCGTAGGACAAAATTTTGGATTTGTA                                                    ]


>consensus_8725#0 CTCCCTCTTCCGCCGCCGCCTCCTCCTCCTCCGCATCGCCCATGGCGGGGGAAACCCTCT CCTCGTCGCCGCGGAAACCCTAAACCCTAGCTCGATTCCGGCGCCCATCGCGCTGCCGCG GAGGCAGAAGGACGGCGGAGGGGGTGGAGGGGGAGAGGAGCGGGTGCTGATCAGCGAGGT GGCGGTGAGGGGGAAGGACGGGGAGCCCCTGGAGCGGCCCGAGCTGGAGGCGGCCGCGGC GGCGGCGCTCCGGGCGTGCCGCCCCAACGCGGCGCTCACGGTGCGGGAGGTGCAGGAGGA CGTGCACCGCGTCGTCGAGAGCGGCCTCTTCCGCTCCTGCATGCCCGTCGCCGTCGACAC CCGTGACGGCATTCGTCTCGTCTTTGAGGTGGAGCCGAACCAGGACTTCCATGGGTTGGT CTGTGAGGGTGCCAACATGCTGCCATCTAAGTTCCTAGAGGACGCATTTCATGATCGCCA TGGGAAAATAATCAATATAAGACATTTGGATCAAGTGATCAAGTCTGTTAATGGATGGTA TCAGGAACGTGGTCTAACTGGCTTGGTTTCATATGCTGAGATTCTTTCTGGAGGAATTCT GAGGCTACAAGTTTCTGAAGCTGAGGTTAATAATATCAATATTCGCTTTCTGGATAGAAG AACTGGTGAACCAACTGTTGGGAAGACGCAACCAGAGACAATACTCCGTCACCTTACCAC CAAGAAGGGTCAGGCTTACAATAGAGCACAAGTGAAAAGGGATGTTGAAACAATCCTTAC TATGGGAATCATGGAGGATGTTACTATAATTCCACAGCCAGTTGGAGATTCTAATAAAGT TGATCTTGTCATGAATCTTGTTGAACGACCTTCGGGTGGTTTTTCTGCTGGTGGTGGCAT TTCAAGTGGGATAACAAATGGACCACTTTCTGGGCTTATTGGCAGTTTTGCATATTCTCA TCGAAATGTTTTTGGGAGGAACAAGAAGCTGAATCTCTCACTGGAGAGGGGGCAAATAGA TTCTATATTTCGATTAAACTATACTGATCCTTGGATTGATGGTGACAATAAGAGGACCTC CAGAACTATCATGGTTCAGAACTCTAGGACTCCCGGAACACTTATCCATGGTGGGGACCA TCCTGACCATGGGCCCATTACAATTGGACGAGTTACTGCTGGCATTGAATACAGTCGACC ATTCAGACCTAAATGGAGTGGCACACTTGGATTAATATTTCAGCATGCTGGTGCTCGTGA TGACAAAGGCAATCCTATCATCAGAGATTTCTATAACAGCCAATTAACTGCCAGCGGAAA TGCTTATGATGATACACTACTAGCTAAGCTTGAAAGTGTCTACACAGACTCTGGAGATCG TAGCTCAACAATGTTCGTTTTCAACATTGAGCAAGGTCTTCCTATTCTTCCTGAGTGGCT CAGTTTTAACAGAGTGACAGCGCGTTTGAGGCAGGGCTATGAAATTGGCCCTGCTCGACT TCTTCTAAGTGCTTCTGGAGGTCATGTAGAGGGAAACTTTTCGCCTCATGAAGCATTTGC AATTGGTGGGACAAATAGTGTAAGAGGATATGAAGAAGGTGCTGTTGGTTCTGGCCGCTC ATATGCTGTTGGTAGTGGAGAAGTCTCTTGCCGCATGTTTGGGCCATTGGAAGGTGTGGT GTTTGGTGACTATGGTAGTGATCTTAGTTCTGGTCCCAAAGTTCCTGGTGACCCAGCCGG AGCTCGTGGGAAGCCAGGAAGTGGTTACGGTTACGGTGTTGGCGTCCGTGTGGACTCCCC ACTGGGACCTTTGCGTCTTGAGTATGCTTTCAATGATAAACAAGCAAGGCGATTTCATTT TGGGGTTGGCTACAGAAATTAACCAGAGTATCATTGTGTTTGTCGGCGTGATCCTTCATT TGATTAGCTGCTGTTAGGAGATAGTACCATTACTTCCATTTCTTTGCGGTATCAATATGT GAAAGCCTTTTGCAAAGCAAATTTTGTCTGTCCCAATTCCCTTATTGTAACATATTTGTA CATTTTTTTCAATCCTCCCTCTTCTCATGTAGATGTTCTTGAAACTGAGGAGAAAATGAT CCCACCAGGTAATTACTCATGACTTATGGTTGGGTGAAGTTCCCTGGGATAATTTAAACA AGTTTTGTCGTTGTCGTAGGACAAAATTTTGGATTTGTATCAATGTCACCATTTGTATTG TAATGTTAGCTGGAGAAATCTGAGCCTCTGC



consensusID : consensus_8725#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 800
fasta sequence
                              [ACGACCTTCGGGTGGTTTTTCTGCTGGTGGTGGCATTTCAAGTGGGATAACAAATGGACCACTTTCTGGGCTTATTGGCAGAAGCTGAATCTCTCACTGGAGAGGGGGCAAATAGATTCTATATTTCGATTAAACTATACTGATCCTTGGATTGATGGTGACAATAAGAGGACCTCCAGAACTATCATGGTTCAGAACTCTAGGACTCCCGGAACACTTATCCATGGTGGGGACCATCCTGACCATGGGCCCATTACAATTGGACGAGTTACTGCTGGCATTGAATACAGTCGACCATTCAGACCTAAATGGAGTGGCACACTTGGATTAATATTTCAGCATGCTGGTGCTCGTGATGACAAAGGCAATCCTATCATCAGAGATTTCTATAACAGCCAATTAACTGCCAGCGGAAATGCTTATGATGATACACTACTAGCTAAGCTTGAAAGTGTCTACACAGACTCTGGAGATCGTAGCTCAACAATGTTCGTTTTCAACATTGAGCAAGGTCTTCCTATTCTTCCTGAGTGGCTCAGTTTTAACAGAGTGACAGCGCGTTTGAGGCAGGGCTATGAAATTGGCCCTGCTCGACTTCTTCTAAGTGCTTCTGGAGGTCATGTAGAGGGAAACTTTTCGCCTCATGAAGCATTTGCAATTGGTGGGACAAATAGTGTAAGAGGATATGAAGAAGGTGCTGTTGGTTCTGGCCGCTCATATGCTGTTGGTAGTGGAGAAGTCTCTTGCCGCATGTTTGGGCCATTGGAAGGTGTGGTGTTTGGTGACTATGGTAGTGATCT]

[+] EMBL CB685697             [ACGACCTTCGGGTGGTTTTTCTGCTGGTGGTGGCATTTCAAGTGGGATAACAAATGGACCACTTTCTGGGCTTATTGGCAGAAGCTGAATCTCTCACTGGAGAGGGGGCAAATAGATTCTATATTTCGATTAAACTATACTGATCCTTGGATTGATGGTGACAATAAGAGGACCTCCAGAACTATCATGGTTCAGAACTCTAGGACTCCCGGAACACTTATCCATGGTGGGGACCATCCTGACCATGGGCCCATTACAATTGGACGAGTTACTGCTGGCATTGAATACAGTCGACCATTCAGACCTAAATGGAGTGGCACACTTGGATTAATATTTCAGCATGCTGGTGCTCGTGATGACAAAGGCAATCCTATCATCAGAGATTTCTATAACAGCCAATTAACTGCCAGCGGAAATGCTTATGATGATACACTACTAGCTAAGCTTGAAAGTGTCTACACAGACTCTGGAGATCGTAGCTCAACAATGTTCGTTTTCAACATTGAGCAAGGTCTTCCTATTCTTCCTGAGTGGCTCAGTTTTAACAGAGTGACAGCGCGTTTGAGGCAGGGCTATGAAATTGGCCCTGCTCGACTTCTTCTAAGTGCTTCTGGAGGTCATGTAGAGGGAAACTTTTCGCCTCATGAAGCATTTGCAATTGGTGGGACAAATAGTGTAAGAGGATATGAAGAAGGTGCTGTTGGTTCTGGCCGCTCATATGCTGTTGGTAGTGGAGAAGTCTCTTGCCGCATGTTTGGGCCATTGGAAGGTGTGGTGTTTGGTGACTATGGTAGTGATCT]


>consensus_8725#1 ACGACCTTCGGGTGGTTTTTCTGCTGGTGGTGGCATTTCAAGTGGGATAACAAATGGACC ACTTTCTGGGCTTATTGGCAGAAGCTGAATCTCTCACTGGAGAGGGGGCAAATAGATTCT ATATTTCGATTAAACTATACTGATCCTTGGATTGATGGTGACAATAAGAGGACCTCCAGA ACTATCATGGTTCAGAACTCTAGGACTCCCGGAACACTTATCCATGGTGGGGACCATCCT GACCATGGGCCCATTACAATTGGACGAGTTACTGCTGGCATTGAATACAGTCGACCATTC AGACCTAAATGGAGTGGCACACTTGGATTAATATTTCAGCATGCTGGTGCTCGTGATGAC AAAGGCAATCCTATCATCAGAGATTTCTATAACAGCCAATTAACTGCCAGCGGAAATGCT TATGATGATACACTACTAGCTAAGCTTGAAAGTGTCTACACAGACTCTGGAGATCGTAGC TCAACAATGTTCGTTTTCAACATTGAGCAAGGTCTTCCTATTCTTCCTGAGTGGCTCAGT TTTAACAGAGTGACAGCGCGTTTGAGGCAGGGCTATGAAATTGGCCCTGCTCGACTTCTT CTAAGTGCTTCTGGAGGTCATGTAGAGGGAAACTTTTCGCCTCATGAAGCATTTGCAATT GGTGGGACAAATAGTGTAAGAGGATATGAAGAAGGTGCTGTTGGTTCTGGCCGCTCATAT GCTGTTGGTAGTGGAGAAGTCTCTTGCCGCATGTTTGGGCCATTGGAAGGTGTGGTGTTT GGTGACTATGGTAGTGATCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8725#0      CTCCCTCTTCCGCCGCCGCCTCCTCCTCCTCCGCATCGCCCATGGCGGGGGAAACCCTCT 60
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      CCTCGTCGCCGCGGAAACCCTAAACCCTAGCTCGATTCCGGCGCCCATCGCGCTGCCGCG 120
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      GAGGCAGAAGGACGGCGGAGGGGGTGGAGGGGGAGAGGAGCGGGTGCTGATCAGCGAGGT 180
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      GGCGGTGAGGGGGAAGGACGGGGAGCCCCTGGAGCGGCCCGAGCTGGAGGCGGCCGCGGC 240
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      GGCGGCGCTCCGGGCGTGCCGCCCCAACGCGGCGCTCACGGTGCGGGAGGTGCAGGAGGA 300
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      CGTGCACCGCGTCGTCGAGAGCGGCCTCTTCCGCTCCTGCATGCCCGTCGCCGTCGACAC 360
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      CCGTGACGGCATTCGTCTCGTCTTTGAGGTGGAGCCGAACCAGGACTTCCATGGGTTGGT 420
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      CTGTGAGGGTGCCAACATGCTGCCATCTAAGTTCCTAGAGGACGCATTTCATGATCGCCA 480
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      TGGGAAAATAATCAATATAAGACATTTGGATCAAGTGATCAAGTCTGTTAATGGATGGTA 540
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      TCAGGAACGTGGTCTAACTGGCTTGGTTTCATATGCTGAGATTCTTTCTGGAGGAATTCT 600
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      GAGGCTACAAGTTTCTGAAGCTGAGGTTAATAATATCAATATTCGCTTTCTGGATAGAAG 660
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      AACTGGTGAACCAACTGTTGGGAAGACGCAACCAGAGACAATACTCCGTCACCTTACCAC 720
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      CAAGAAGGGTCAGGCTTACAATAGAGCACAAGTGAAAAGGGATGTTGAAACAATCCTTAC 780
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      TATGGGAATCATGGAGGATGTTACTATAATTCCACAGCCAGTTGGAGATTCTAATAAAGT 840
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      TGATCTTGTCATGAATCTTGTTGAACGACCTTCGGGTGGTTTTTCTGCTGGTGGTGGCAT 900
consensus_8725#1      ------------------------ACGACCTTCGGGTGGTTTTTCTGCTGGTGGTGGCAT 36
                                              ************************************

consensus_8725#0      TTCAAGTGGGATAACAAATGGACCACTTTCTGGGCTTATTGGCAGTTTTGCATATTCTCA 960
consensus_8725#1      TTCAAGTGGGATAACAAATGGACCACTTTCTGGGCTTATTGGCA---------------- 80
                      ********************************************                

consensus_8725#0      TCGAAATGTTTTTGGGAGGAACAAGAAGCTGAATCTCTCACTGGAGAGGGGGCAAATAGA 1020
consensus_8725#1      ------------------------GAAGCTGAATCTCTCACTGGAGAGGGGGCAAATAGA 116
                                              ************************************

consensus_8725#0      TTCTATATTTCGATTAAACTATACTGATCCTTGGATTGATGGTGACAATAAGAGGACCTC 1080
consensus_8725#1      TTCTATATTTCGATTAAACTATACTGATCCTTGGATTGATGGTGACAATAAGAGGACCTC 176
                      ************************************************************

consensus_8725#0      CAGAACTATCATGGTTCAGAACTCTAGGACTCCCGGAACACTTATCCATGGTGGGGACCA 1140
consensus_8725#1      CAGAACTATCATGGTTCAGAACTCTAGGACTCCCGGAACACTTATCCATGGTGGGGACCA 236
                      ************************************************************

consensus_8725#0      TCCTGACCATGGGCCCATTACAATTGGACGAGTTACTGCTGGCATTGAATACAGTCGACC 1200
consensus_8725#1      TCCTGACCATGGGCCCATTACAATTGGACGAGTTACTGCTGGCATTGAATACAGTCGACC 296
                      ************************************************************

consensus_8725#0      ATTCAGACCTAAATGGAGTGGCACACTTGGATTAATATTTCAGCATGCTGGTGCTCGTGA 1260
consensus_8725#1      ATTCAGACCTAAATGGAGTGGCACACTTGGATTAATATTTCAGCATGCTGGTGCTCGTGA 356
                      ************************************************************

consensus_8725#0      TGACAAAGGCAATCCTATCATCAGAGATTTCTATAACAGCCAATTAACTGCCAGCGGAAA 1320
consensus_8725#1      TGACAAAGGCAATCCTATCATCAGAGATTTCTATAACAGCCAATTAACTGCCAGCGGAAA 416
                      ************************************************************

consensus_8725#0      TGCTTATGATGATACACTACTAGCTAAGCTTGAAAGTGTCTACACAGACTCTGGAGATCG 1380
consensus_8725#1      TGCTTATGATGATACACTACTAGCTAAGCTTGAAAGTGTCTACACAGACTCTGGAGATCG 476
                      ************************************************************

consensus_8725#0      TAGCTCAACAATGTTCGTTTTCAACATTGAGCAAGGTCTTCCTATTCTTCCTGAGTGGCT 1440
consensus_8725#1      TAGCTCAACAATGTTCGTTTTCAACATTGAGCAAGGTCTTCCTATTCTTCCTGAGTGGCT 536
                      ************************************************************

consensus_8725#0      CAGTTTTAACAGAGTGACAGCGCGTTTGAGGCAGGGCTATGAAATTGGCCCTGCTCGACT 1500
consensus_8725#1      CAGTTTTAACAGAGTGACAGCGCGTTTGAGGCAGGGCTATGAAATTGGCCCTGCTCGACT 596
                      ************************************************************

consensus_8725#0      TCTTCTAAGTGCTTCTGGAGGTCATGTAGAGGGAAACTTTTCGCCTCATGAAGCATTTGC 1560
consensus_8725#1      TCTTCTAAGTGCTTCTGGAGGTCATGTAGAGGGAAACTTTTCGCCTCATGAAGCATTTGC 656
                      ************************************************************

consensus_8725#0      AATTGGTGGGACAAATAGTGTAAGAGGATATGAAGAAGGTGCTGTTGGTTCTGGCCGCTC 1620
consensus_8725#1      AATTGGTGGGACAAATAGTGTAAGAGGATATGAAGAAGGTGCTGTTGGTTCTGGCCGCTC 716
                      ************************************************************

consensus_8725#0      ATATGCTGTTGGTAGTGGAGAAGTCTCTTGCCGCATGTTTGGGCCATTGGAAGGTGTGGT 1680
consensus_8725#1      ATATGCTGTTGGTAGTGGAGAAGTCTCTTGCCGCATGTTTGGGCCATTGGAAGGTGTGGT 776
                      ************************************************************

consensus_8725#0      GTTTGGTGACTATGGTAGTGATCTTAGTTCTGGTCCCAAAGTTCCTGGTGACCCAGCCGG 1740
consensus_8725#1      GTTTGGTGACTATGGTAGTGATCT------------------------------------ 800
                      ************************                                    

consensus_8725#0      AGCTCGTGGGAAGCCAGGAAGTGGTTACGGTTACGGTGTTGGCGTCCGTGTGGACTCCCC 1800
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      ACTGGGACCTTTGCGTCTTGAGTATGCTTTCAATGATAAACAAGCAAGGCGATTTCATTT 1860
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      TGGGGTTGGCTACAGAAATTAACCAGAGTATCATTGTGTTTGTCGGCGTGATCCTTCATT 1920
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      TGATTAGCTGCTGTTAGGAGATAGTACCATTACTTCCATTTCTTTGCGGTATCAATATGT 1980
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      GAAAGCCTTTTGCAAAGCAAATTTTGTCTGTCCCAATTCCCTTATTGTAACATATTTGTA 2040
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      CATTTTTTTCAATCCTCCCTCTTCTCATGTAGATGTTCTTGAAACTGAGGAGAAAATGAT 2100
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      CCCACCAGGTAATTACTCATGACTTATGGTTGGGTGAAGTTCCCTGGGATAATTTAAACA 2160
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      AGTTTTGTCGTTGTCGTAGGACAAAATTTTGGATTTGTATCAATGTCACCATTTGTATTG 2220
consensus_8725#1      ------------------------------------------------------------
                                                                                  

consensus_8725#0      TAATGTTAGCTGGAGAAATCTGAGCCTCTGC 2251
consensus_8725#1      -------------------------------
                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)