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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8736#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1523 fasta sequence
[AATAATATCAGCTCTCCTTGCCACCGCTGATCGTTCTGATTCCAACAATTCCAGGCTTTGTGCTTCTGCATATGAAACACTAAATGAGATTGTCAGATGCAGCCATATCTCAGAGAACTTGAACATGATCGTGCAGTTATTACAAGAGATCTTGAAGAGATTGAACCAGACTTTTGAGATTCAGATCACATCCTCTGACGACAAGGAAAAGCAAAGTGACCTTCAAGCCTTGCTCTGTGGTGTTGCTCAAGTAATCCTTCAAAAGTTCAGTAGCTGTCATGAAAAATCAGCAATTCTTCATTTTGCTGACCAAATGATGGTGTTATTTCTCCGAGTCTTTTCATGCAATAGTTCTAATGTGCATGAAGAAGCCATGCTTGCTATTGGTGCTCTTGCTTATGCTACTGGACCAGAATTTGTGAAATACATGCCAGAATTCCACAAGTACCTAGAAATGGGCTTACAAAATTTTGGGGCTTATCAAGTCTGTTGTGTTTCTGTGGGTGTGGTTGGTGACATCTGCCATGCCTTAGATGACAAGGTGCTCCCTTACTGTGATGGTATCATGTCCACTCTTCTCAAAGATCTCTCAAGCCCAGAGCTTCACCGTTCCGTCAAACCTCCAATACTGTCTTGCATAGGAGATATTGCTCTTACAATGGGCGAACATTTTGAGAAATATGTCCCATACACTATGCCTATGCTGCAAGGAGCTGCAGAGCTTTGCTTTCGCATGGACGCTCCGGATGATGATAGCATAGAGTATCAAAATGAGCTCAGCCGAAGCATTTTTGAGGCCTACTCAGGCATACTTCAGGGCTTCAAGAATTCAAAGTCAGAGCTAATGGTGCCTTATGCTGGAAATATTTTCCAATTCGTTGAATTGGTCTTGAAAGACAACCTTTTAAGGAATGAGAGTGTG-ACCAAAGCTGGGGTTGCCATGGTTGGGGACCTAGC-AGACG-CA-TTAGGGCCCAACATAAAATTGCTGTTCAAGGACTCCAAATTCCACTCGGAGCTCCTCGGCCAATGTTGCCAGTCTGATGATGAACAGCTAAGGGAAACTGCATCCTGGGTC-CAGGGGGTGATCACACGCGTCCTGGTTTCATGAGGGAAGATTTCTCAAGTAAAACTGCTGGTTTCATGAGGGAAGACTTCTCAAGTAAAACTGCTGGTCGTGTACTATCAGGTTATTTTTCTTTTCCAATGCCAGGTGAATTGTTTTAGAAGTGCGTTACACATTTGTCCCGTTGTGTTGCAAATAGAAAACTTTTACAAAAGGCGAGAGGTTACATAACTTACATTACACAAGATGATTTTTCTACTGGCAGCCGTTTGCCATTCTTCAGAAA-T-AGGCCGGTGT-CCCTGGGTCTCTGTTGCGTTTTATTCAGTTGTCCATGTGGATCGATTGTAATCGCAGCAATGCTATTTGGCTTGTTG-CTC-TCTG-AAATGGTAAA--GT-CCTGTTAGCAT--CATCGCTCATTGCGATGATGATA-GCG-TCAGTTAAAAAGTTGTCT-CTTGAAAAAAAA]
[+] EMBL AK110762 [AATAATATCAGCTCTCCTTGCCACCGCTGATCGTTCTGATTCCAACAATTCCAGGCTTTGTGCTTCTGCATATGAAACACTAAATGAGATTGTCAGATGCAGCCATATCTCAGAGAACTTGAACATGATCGTGCAGTTATTACAAGAGATCTTGAAGAGATTGAACCAGACTTTTGAGATTCAGATCACATCCTCTGACGACAAGGAAAAGCAAAGTGACCTTCAAGCCTTGCTCTGTGGTGTTGCTCAAGTAATCCTTCAAAAGTTCAGTAGCTGTCATGAAAAATCAGCAATTCTTCATTTTGCTGACCAAATGATGGTGTTATTTCTCCGAGTCTTTTCATGCAATAGTTCTAATGTGCATGAAGAAGCCATGCTTGCTATTGGTGCTCTTGCTTATGCTACTGGACCAGAATTTGTGAAATACATGCCAGAATTCCACAAGTACCTAGAAATGGGCTTACAAAATTTTGGGGCTTATCAAGTCTGTTGTGTTTCTGTGGGTGTGGTTGGTGACATCTGCCATGCCTTAGATGACAAGGTGCTCCCTTACTGTGATGGTATCATGTCCACTCTTCTCAAAGATCTCTCAAGCCCAGAGCTTCACCGTTCCGTCAAACCTCCAATACTGTCTTGCATAGGAGATATTGCTCTTACAATGGGCGAACATTTTGAGAAATATGTCCCATACACTATGCCTATGCTGCAAGGAGCTGCAGAGCTTTGCTTTCGCATGGACGCTCCGGATGATGATAGCATAGAGTATCAAAATGAGCTCAGCCGAAGCATTTTTGAGGCCTACTCAGGCATACTTCAGGGCTTCAAGAATTCAAAGTCAGAGCTAATGGTGCCTTATGCTGGAAATATTTTCCAATTCGTTGAATTGGTCTTGAAAGACAACCTTTTAAGGAATGAGAGTGTG ACCAAAGCTGGGGTTGCCATGGTTGGGGACCTAGC AGACG CA TTAGGGCCCAACATAAAATTGCTGTTCAAGGACTCCAAATTCCACTCGGAGCTCCTCGGCCAATGTTGCCAGTCTGATGATGAACAGCTAAGGGAAACTGCATCCTGGGTC CAGGGGGTGATCACACGCGTCCTGGTTTCATGAGGGAAGACTTCTCAAGTAAAACTGCTGGTTTCATGAGGGAAGACTTCTCAAGTAAAACTGCTGGTCGTGTACTATCAGGTTATTTTTCTTTTCCAATGCTAGGTGAATTGTTTTAGAAGTGCGTTACACATTTGTCCCGTTGTGTTGCAAATAGAAAACTTTTACAAAAGGCGAGAGGTTACATAACTTACATTACACAAGATGATTTTTCTACTGGCAGCCGTTTGCCATTCTTCAGAAA T AGGCCGGTGT CCCTGGGTCTCTGTTGCGTTTTATTCAGTTGTCCATGTGGATCGATTGTAATCGCGACAATGCTATTTGGTTTGTTG CTC TCTG AAATGGTAAA GT CCTGTTGGCAT CATCGCTCATTGCGATGATGAT ]
[+] EMBL BI804202 [ TGTGCACCAAACCTGG TCCCAT GTT GGCACCTAGCAAGACGCCATTTAGGCCCCAACATAAAATTGCTGTTCAA GACTCCAAATTCCACTCGGAGCTCCTCGGCCAATGTTGCCAGTCTGATGATGAACAGCTAAGGGAAACTGCATCCTGGGTCACAGGGGGTGATCACACGCGTCCTGGTTTCATGAGGGAAGATTTCTCAAGTAAAACTGCTGGTTTCATGAGGGAAGACTTCTCAAGTAAAACTGCTGGTCGTGTACTATCAGGTTATTTTTCTTTTCCAATGCCAGGTGAATTGTTTTAGAAGTGCGTTACACATTTGTCCCGTTGTGTTGCAAATAGAAAACTTTTAC AAAGGCGAGAGGTTACATAACTTACATTACACCAGATGATTTTTCTACTGGCAGCCGTTTGCCATTCTTCAGAAA T AGGCCGGTGT CCCTGGGTCTCTGTTGCGTTTTATTCAGTTGTCCATGTGGATCGATTGTAATCGCAGCAATGCTATTTGGCTTGTTG CTC TCTG AAATGGTAAA GT CCTGTTAGCAT CATCGCTCATTGCGATGATGATA GCG TCAGTTAAAAAGTTGTCT CTTGAAAAAAAA]
[+] EMBL BI802977 [ AACATAAAATTGCTGTTCAAGGACTCC AATTCCACTCGGAGCTCCTCGGCCAATGTTGCCAGTCTGATGATGAACAGCTAAGGGAAACTGCATCCTGGGTC CAGGGGGTGATCACACGCGTCCTGGTTTCATGAGGGAAGATTTCTCAAGTAAAACTGCTGGTTTCATGAGGGAAGACTTCTCAAGTAAAACTGCTGGTCGTGTACTATCAGGTTATTTTTCTTTTCC ATGCCAGGTGAATTGTTTTAGAAGTGCGTTACACATTTGTCCCGTTGTGTTGCAAATAGAAAACTTTTACCAAAGGCGAGAGGTTACATAACTTACATTACACAAGATGATTTTTCTACTGGCAGCCGTTTGCCATTCTTCAGAAACTCCGGCCGGTGTCCCCTGGGTCTCTGTTGCGTTTTATTCAGTTGTCCATGTGGATCGATTGTAATCGCAGCAATGCTATTTGGCTTGTTG CTC TCTG AAATGGTAAA GT CCTGTTAGCAT CATCGCTCATTGCGATGATGATACCCC TCAGTTAAAAAGTTGTCT CTTGAAAAAAAA]
[+] EMBL BI802945 [ AAGGGAAACTGCATCCTGGGTC CAGGGGGTGATCACACGCGTCCTGGTTTCATGAGGGAAGATTTCTCAAGTAAAACTGCTGGTTTCATGAGGGAAGACTTCTCAAGTAAAACTGCTGGTCGTGTACTATCAGGTTATTTTTCTTTTCCAATGCCAGGTGAATTGTTTTAGAAGTGCGTTACACATTTGTCCCGTTGTGTTGCAAATAGAAAACTTTTACCAAAGGCGAGAGGTTACATAACTTACATTACACAAGATGATTTTTCTACTGGCAGCCGTTTGCCATTCTTCAGAAACT AGGCCGGTGT CCCTGGGTCTCTGTTGCGTTTTATTCAGTTGTCCATGTGGATCGATTGTAATCGCAGCAATGCTATTTGGCTTGTTGCCTCTTCTGAAAATGGTAAAAGGTCCCTGTTAGCAT CATCGCTCATTGCGATGATGATA GCGCTCAGTTAAAAAGTTGTCT CTTGAAAAAAAA]
[+] EMBL BI803087 [ GTGAATTGTTTTAGAAGTGCGTTACACATTTGTCCCGTTGTGTTGCAAATAGAAAACTTTTACAAAAGGCGAGAGGTTACATAACTTACATTACACAAGATGATTTTTCTACTGGCACCCGTTTGCCATTCTTCAGAAA T AGGCCGGTGTCCCCTGGGTCTCTGTTGCGTTTTATTCAGTTGTCCATGTGGATCGATTGTAATCGCAGCAATGCTATTTGGCTTGTTG CTC TCTG AAATGGTAAA GT CCTGTTAGCATTCCATCGCTCATT CGATGATGATA GCG TCAG TAAAAATTTGTCTCCTTGAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||