These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8743#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1124 fasta sequence [AACCCAAACCGAGCGCAGC-GCACGGACCGAGATCTGCGCCCGGCAGCGGCGGCGAACTCCGGTGAACCAACCATGGCCGTGGACCTGATGGGCTGCTACGCCCCGCGCCGCGCAGACGACCAGCTCGCCATCCAGGAGGCGGCCACCGCCGG-CCTCCGCAGCCTGGAGATGCTCGTGTCGTCCCTCTCCTCCTCCTCTCAGGCCGCCGGGGCTCACAAGGCCTCGCCGCAGCAGCAGCCGTTCGGCGAGATCGCCGACCAGGCCGTCTCCAAGTTCCGCAAGGTCATCTCCATCCTCGACCGCACCGGCCACGCCCGCTTCCGCCGCGGCCCGGTCGAGTCGTCTGCTCCCGCCGCCCCCGTCGCTGCTGCTCCCCCTCCTCCTCCTCCACCACCGGCGCCGGTCGCTGCCGCCCTCGCGCCGACCTCCTCGCAGCCGCAGACCCTGACGCTGGACTTCACGAAGCCGAACCTGACCATGTCGGCCGCGACGTCCGTGACATCCACGTCGTTCTTCTCGTCGGTGACGGCCGGCGAGGGAAGCGTTTCCAAGGGCCGGAGCCTGCTCTCCTCCGGCAAGCCGCCGCTGTCTGGGCACAAGCGGAAGCCCTGCGCCGGCGGCCACTCCGAGGCCACCGCCAACGGCGGCCGCTGCCACTGCTCCAAGAGAAGGAAGAACCGGGTGAAGAGGACGATCCGAGTGCCGGCAATCAGCTCGAAGATCGCCGACATCCCGCCGGACGAATACTCGTGGAGGAAGTACGGCCAGAAACCCATCAAGGGCTCCCCTTACCCACGGGGCTACTACAAGTGCAGCACAGTGAGAGGATGCCCCGCGCGGAAGCACGTGGAGCGCGCCACCGACGACCCGGCGATGCTGGTCGTGACCTACGAGGGCGAGCACCGCCACACGCCGGGGCCCCTCCCGGCGCCACCCGCCGCCGCCGCCGTCGCCGCGATGCCGGTGTCCGTCGCCGTGTCCACCGGCAACGGACATGTCTAACCTAATTAGCTCCATAATTTTTTTCTTCTTTTTTTTTTTAGTTGCTTCTCATCAATCTAATGATGCGTGTAAAGAAGAAAAGATTGTAGAAAGAGGACGAGGGAAACTTGATGCTAGAGAAT] [+] EMBL AK072938 [AACCCAAACCGAGCGCAGC GCACGGACCGAGATCTGCGCCCGGCAGCGGCGGCGAACTCCGGTGAACCAACCATGGCCGTGGACCTGATGGGCTGCTACGCCCCGCGCCGCGCAGACGACCAGCTCGCCATCCAGGAGGCGGCCACCGCCGG CCTCCGCAGCCTGGAGATGCTCGTGTCGTCCCTCTCCTCCTCCTCTCAGGCCGCCGGGGCTCACAAGGCCTCGCCGCAGCAGCAGCCGTTCGGCGAGATCGCCGACCAGGCCGTCTCCAAGTTCCGCAAGGTCATCTCCATCCTCGACCGCACCGGCCACGCCCGCTTCCGCCGCGGCCCGGTCGAGTCGTCTGCTCCCGCCGCCCCCGTCGCTGCTGCTCCCCCTCCTCCTCCTCCACCACCGGCGCCGGTCGCTGCCGCCCTCGCGCCGACCTCCTCGCAGCCGCAGACCCTGACGCTGGACTTCACGAAGCCGAACCTGACCATGTCGGCCGCGACGTCCGTGACATCCACGTCGTTCTTCTCGTCGGTGACGGCCGGCGAGGGAAGCGTTTCCAAGGGCCGGAGCCTGCTCTCCTCCGGCAAGCCGCCGCTGTCTGGGCACAAGCGGAAGCCCTGCGCCGGCGGCCACTCCGAGGCCACCGCCAACGGCGGCCGCTGCCACTGCTCCAAGAGAAGGAAGAACCGGGTGAAGAGGACGATCCGAGTGCCGGCAATCAGCTCGAAGATCGCCGACATCCCGCCGGACGAATACTCGTGGAGGAAGTACGGCCAGAAACCCATCAAGGGCTCCCCTTACCCACGGGGCTACTACAAGTGCAGCACAGTGAGAGGATGCCCCGCGCGGAAGCACGTGGAGCGCGCCACCGACGACCCGGCGATGCTGGTCGTGACCTACGAGGGCGAGCACCGCCACACGCCGGGGCCCCTCCCGGCGCCACCCGCCGCCGCCGCCGTCGCCGCGATGCCGGTGTCCGTCGCCGTGTCCACCGGCAACGGACATGTCTAACCTAATTAGCTCCATAATTTTTTTCTTC CTTTTTTTTTAGTTGCTTCTCATCAATCTAATGATGCGTGTAAAGAAGAAAAGATTGTAGAAAGAGGACGAGGGAAACTTGATGCTAGAGAAT] [+] EMBL AK061266 [ ACCCAAACCGAGCGCAGC GCACGGACCGAGATCTGCGCCCGGCAGCGGCGGCGAACTCCGGTGAACCAACCATGGCCGTGGACCTGATGGGCTGCTACGCCCCGCGCCGCGCAGACGACCAGCTCGCCATCCAGGAGGCGGCCACCGCCGG CCTCCGCAGCCTGGAGATGCTCGTGTCGTCCCTCTCCTCCTCCTCTCAGGCCGCCGGGGCTCACAAGGCCTCGCCGCAGCAGCAGCCGTTCGGCGAGATCGCCGACCAGGCCGTCTCCAAGTTCCGCAAGGTCATCTCCATCCTCGACCGCACCGGCCACGCCCGCTTCCGCCGCGGCCCGGTCGAGTCGTCTGCTCCCGCCGCCCCCGTCGCTGCTGCTCCCCCTCCTCCTCCTCCACCACCGGCGCCGGTCGCTGCCGCCCTCGCGCCGACCTCCTCGCAGCCGCAGACCCTGACGCTGGACTTCACGAAGCCGAACCTGACCATGTCGGCCGCGACGTCCGTGACATCCACGTCGTTCTTCTCGTCGGTGACGGCCGGCGAGGGAAGCGTTTCCAAGGGCCGGAGCCTGCTCTCCTCCGGCAAGCCGCCGCTGTCTGGGCACAAGCGGAAGCCCTGCGCCGGCGGCCACTCCGAGGCCACCGCCAACGGCGGCCGCTGCCACTGCTCCAAGAGAAGGAAGAACCGGGTGAAGAGGACGATCCGAGTGCCGGCAATCAGCTCGAAGATCGCCGACATCCCGCCGGACGAATACTCGTGGAGGAAGTACGGCCAGAAACCCATCAAGGGCTCCCCTTACCCACGGGGCTACTACAAGTGCAGCACAGTGAGAGGATGCCCCGCGCGGAAGCACGTGGAGCGCGCCACCGACGACCCGGCGATGCTGGTCGTGACCTACGAGGGCGAGCACCGCCACACGCCGGGGCCCCTCCCGGCGCCACCCGCCGCCGCCGCCGTCGCCGCGATGCCGGTGTCCGTCGCCGTGTCCACCGGCAACGGACATGTCTAACCTAATTAGCTCCATAATTTTTTTCTTCTTTTTTTTTTTAGTTGCTTCTCATCAATCTAATGATGCGTGTAAAGAAGAAAAGATTGTAGAAAGAGGACGAGGGAAACTTGATGCTAGAGAAT] [+] EMBL OSC25241 [ AGCGCAGCAGC GGGACCGAGATCTGCGCCCGGCAGCGGCGGCGAACTCCGGTGAACCAACCATGGCCGTGGACCTGATGGGCTGCTACGCCCCGCGCCGCGCAGACGACCAGCTCGCCATCCAGGAGGCGGCCACCG CGN CNTCCGCAGCCTGGAGATGCTCGTTTNGTCCCTCTCCTNCTCC ] [+] EMBL AU069036 [ CTNCGCCCGGCAGCGGCGGCGAACTCCGGTGAACCAACCATNGCCGTGGACCTGATNGGCTGCTACNCCCCGCGCCGCGCAGACGACCAGCTCGCCATCCAGGAGGCGGCCACCGCCGGNCCTCCGCAGCCTGGAGATNCTCGTNTCGTCCCTCTCCTCCTCCTCTCANGCCGCCGGGGCTCACAAGGCCTCGCCGCAGCAGCAGCCGTTCGGCGAGATCNCCGACCAGNCCGTCTCCAAGTTCCGCAAGGTCATCT ] [+] EMBL CB967252 [ CTGCTCCAAGAGAAGGAAGAACCGGGTGAAGAGGACGATCCGAGTGCCGGCAATCAGCTCGAAGATCGCCGACATCCCGCCGGACGAATACTCGTGGAGGAAGTACGGCCAGAAACCCATCAAGGGCTCCCCATATCCACGGGGCTACTACAAGTGTAGCACAGTGAGAGGATGCCCCGCGCGGAAGCACGTGGAGCGCGCCACCGACGACCCGGCGATGCTGGTCGTGACCTACGAGGGCGAGCACCGCCACACGCCGGGACCCCTCCCGGCGCCACCCGCCGCCGCCGCCGTCGCCGCGATGCCGGTGTCCGTCGCCGTGTCCACCGGCAACGGACATGTCTAACCTAATTAGCTCCATAATTTTTTT TTTTTTTTTTTTTTAGTTGCTTCTCATCAATCTAATGATGCGTGTAAAGAAGAAAAGATTGTAGAAAGAGGACGAG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||