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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8763 cluster # 8763       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8763#0 length = 966 sequences # 5  

consensusID : consensus_8763#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 966
fasta sequence
                              [CCTCCTCGTGTCTCGCCGCGACCAACCTGCCCTCTTTTTGGCCTTCAGATCCGTCTCGGATCGCCTCGCCGCTCTCGTTCGTATCTCTCCTCGCGCGTCTCCTCCTCTTCTTCTCCCCCACGATTTCGTTCGTCTGCCCGGACAGCACCCCGGATCCCTCGCCCCGCGCCGCCTCCTCCTCCTGAGCTGGAATGGAAGGTGTTGTTGTGAGGAGGGTGATCCCTTCGGACAACAGTTGCCTCTTCAATGCTGTTGGGTATGTCATGGAGCATAACAGGAACAAGGCTTCTGAGCTCAGACAGGTTATAGCAGCAGCAGTTGCTAGTGATCCTGCAAAGTACAGTGAAGTTTTTCTTGGAAAACCAAATGAAGCGTACTGTGCTTGGATTTTGGATTCTGAAAAGTGGGGAGGTGCCATTGAACTTTCTATCCTATCGGAATATTATGGGCGTGAAATTGCTGCATATGACATCCAGACAACCCGCTGTGATCTGTATGGTCAGGAGAAGAACTACACTGAGCGAACTATGCTCATCTATGATGGGCTGCATTATGATGCTTTAGCTATGTCACCATTTGAAGGTGCACCGGAAGAATTTGATCAGACTATCTTCCCTGTCGACCACAAATGGTCGATTGGCCCAGTAGAGGGCCTTGCTCTTAACTTCGTGAAGGATGAAAAGAGGAAGAGGAGCTACACAGACACTGCAAACTTCACCTTGCGCTGTGGCGTCTGCCAAATTGGTGCGATTGGTCAAAAGGAAGCCGTTGAACATGCTCAGGCCACTGGACATGTCAACTTCCAAGAATACAAAAAACTGTACAAGATAAAACCTGTGTTGTAACTTGTAAAACCCATGTTCATTTGTTCCAATTGATAATTCTTCTCGGGTTGGATATGGTATAGAACTGTATTACAACATTTGTTACAGGGTAATTTAATAATGCCAGTTTGGATAAAAAAAA]

[+] EMBL CF296986             [CCTCCTCGTGTCTCGCCGCGACCAACCTGCCCTCTTTTTGGCCTTCAGATCCGTCTCGGATCGCCTCGCCGCTCTCGTTCGTATCTCTCCTCGCGCGTCTCCTCCTCTTCTTCTCCCCCACGATTTCGTTCGTCTGCCCGGACAGCACCCCGGATCCCTCGCCCCGCGCCGCCTCCTCCTCCTGAGCTGGAGTGGAAGGTGTTGTTGTGAGGAGGGTGATCCCTTCGGACAACAGTTGCCTCTTCAATGCTGTTGGGTATGTCATGGAGCATAACAGGAACAAGGCTTCTGAGCTCAGACAGGTTATAGCAGCAGCAGTTGCTAGTGATCCTGCAAAGTACAGTGAAGTTTTTCTTGGAAAACCAAATGAAGCGTACTGTGCTTGGATTTTGGATTCTGAAAAGTGGGGAGGTGCCATTGAACTTTCTATCCTATCGGAATATTATGGGCGTGAAATTGCTGCATATGACATCCAGACAACCCGCTGTGATCTGTATGGTCAGGAGAAGAACTACACTGAGCGAACTATGCTCATCTATGATGGGCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF336858             [                                                           ATCGCCTCGCCGCTCTCGTTCGTATCTCTCCTCGCGCGTCTCCTCCTCTTCTTCTCCCCCACGATTTCGTTCGTCTGCCCGGACAGCACCCTGGATCCCTCGCCCCGCGCCGCCTCCTCCTCCTGAGCTGGAATGGAAGGTGTTGTTGTGAGGAGGGTGATCCCTTCGGACAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA753599             [                                                                                    CTCTCCTCGCGCGTCTCCTCCTCTTCTTCTCCCCCACGATTTCGTTCGTCTGCCCGGACAGCACCCCGGATCCCTCGCCCCGCGCCGCCTCCTCCTCCTGAGCTGGAATGGAAGGTGTTGTTGTGAGGAGGGTGATCCCTTCGGACAACAGTTGCCTCTTCAATGCTGTTGGGTATGTCATGGAGCATAACAGGAACAAGGCTTCTGAGCTCAGACAGGTTATAGCAGCAGCAGTTGCTAGTGATCCTGCAAAGTACAGTGAAGTTTTTCTTGGAAAACCAAATGAAGCGTACTGTGCTTGGATTTTGGATTCTGAAAAGTGGGGAGGTGCCATTGAACTTTCTATCCTATCGGAATATTATGGGCGTGAAATNGCTGCATATGACATCCAGACAACCCGCTGTGATCTGTATGGTCAGGAGAAGAACTACACTGAGCGAACTATGCTCATCTATGATGGGCTGCATTATGATGCTTTAGCTATGTCCCCATTTGAAGGTGCACCGGAAGAATTTGATCAGACTATCTTCCCTGTCGACCACAAATGGTCGATGGGCCCAGTAGAGGGCC TGCTCTTAAC TCGTGAAGGATGANAAGAGG AGAGGAG                                                                                                                                                                                                                                                                                ]
[-] EMBL CF296987             [                                                                                                                                                                                                                                                                                                                                                                               TGAAGCGTACTGTGCTTGGATTTTGGATTCTGAAAAGTGGGGAGGTGCCATTGAACTTTCTATCCTATCGGAATATTATGGGCGTGAAATTGCTGCATATGACATCCAGACAACCCGCTGTGATCTGTATGGTCAGGAGAAGAACTACACTGAGCGAACTATGCTCATCTATGATGGGCTGCATTATGATGCTTTAGCTATGTCACCATTTGAAGGTGCACCGGAAGAATTTGATCAGACTATCTTCCCTGTCGACCACAAATGGTCGATTGGCCCAGTAGAGGGCCTTGCTCTTAACTTCGTGAAGGATGAAAAGAGGAAGAGGAGCTACACAGACACTGCAAACTTCACCTTGCGCTGTGGCGTCTGCCAAATTGGTGCGATTGGTCAAAAGGAAGCCGTTGAACATGCTCAGGCCACTGGACATGTCAACTTCCAAGAATACAAAAAACTGTACAAGATAAAACCTGTGTTGTAACTTGTAAAACCCATGTTCATTTGTTCCAATTGATAATTCTTCTCGGGTTGGATATGGTATAGAACTGTATTACAACATTTGTTACAGGGTAATTTAATAATGCCAGTTTGGATAAAAAAAA]
[+] EMBL AK062817             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTTTAGCTATGTCACCATTTGAAGGTGCACCGGAAGAATTTGATCAGACTATCTTCCCTGTCGACCACAAATGGTCGATTGGCCCAGTAGAGGGCCTTGCTCTTAACTTCGTGAAGGATGAAAAGAGGAAGAGGAGCTACACAGACACTGCAAACTTCACCTTGCGCTGTGGCGTCTGCCAAATTGGTGTGATTGGTCAAAAGGAAGCCGTTGAACATGCTCAGGCCACTGGACATGTCAACTTCCAAGAATACAAATGACTGTACAAGATAAAACCTGTGTTGTAACTTGTAAAACCCATGTTCATTTGTTCCAATTGATAATTCTTCTCGGGTTGGATATGGTATAGAACTGTATTACAACATTTGTTACAGGGTAATTTAATAATGC                  ]


>consensus_8763#0 CCTCCTCGTGTCTCGCCGCGACCAACCTGCCCTCTTTTTGGCCTTCAGATCCGTCTCGGA TCGCCTCGCCGCTCTCGTTCGTATCTCTCCTCGCGCGTCTCCTCCTCTTCTTCTCCCCCA CGATTTCGTTCGTCTGCCCGGACAGCACCCCGGATCCCTCGCCCCGCGCCGCCTCCTCCT CCTGAGCTGGAATGGAAGGTGTTGTTGTGAGGAGGGTGATCCCTTCGGACAACAGTTGCC TCTTCAATGCTGTTGGGTATGTCATGGAGCATAACAGGAACAAGGCTTCTGAGCTCAGAC AGGTTATAGCAGCAGCAGTTGCTAGTGATCCTGCAAAGTACAGTGAAGTTTTTCTTGGAA AACCAAATGAAGCGTACTGTGCTTGGATTTTGGATTCTGAAAAGTGGGGAGGTGCCATTG AACTTTCTATCCTATCGGAATATTATGGGCGTGAAATTGCTGCATATGACATCCAGACAA CCCGCTGTGATCTGTATGGTCAGGAGAAGAACTACACTGAGCGAACTATGCTCATCTATG ATGGGCTGCATTATGATGCTTTAGCTATGTCACCATTTGAAGGTGCACCGGAAGAATTTG ATCAGACTATCTTCCCTGTCGACCACAAATGGTCGATTGGCCCAGTAGAGGGCCTTGCTC TTAACTTCGTGAAGGATGAAAAGAGGAAGAGGAGCTACACAGACACTGCAAACTTCACCT TGCGCTGTGGCGTCTGCCAAATTGGTGCGATTGGTCAAAAGGAAGCCGTTGAACATGCTC AGGCCACTGGACATGTCAACTTCCAAGAATACAAAAAACTGTACAAGATAAAACCTGTGT TGTAACTTGTAAAACCCATGTTCATTTGTTCCAATTGATAATTCTTCTCGGGTTGGATAT GGTATAGAACTGTATTACAACATTTGTTACAGGGTAATTTAATAATGCCAGTTTGGATAA AAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)