These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8766#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1006 fasta sequence [ACTAATCCATCCTGTAGCTTCTAATCAAACTGAGAGGGAGAGAGATCAGAGAGAGCGCATATAAATACAATGAGCAGGTCGAGCATGGCCGCTGTCTTCCTGGTGGTGTTGATAGCCATCAACGTCGTCTGCTTATCCCCACAAGGTGCAACTGCAGCGCCAGAGGGGGAACTTCATAAACTCAACCTTGAGCTGCCACCGCCGTTGCCGCCTGGGAAGGAACCCTCAACGGAGGCGTACCGGTTCACCCAACAAGTCTGCGATTTTGGAACTAGCACCTTCACGGAACAGATGATCGGTGCCCGCTGCTACGATGTACTCATCCCGTATGGCGAGTCATTCAAGGGCAACCAAGTGAAGGCCACTCAGGTGGCCACCATCATCTTAGTCACCAAGATCCAAGCCCTCACTAGTGAGGCGTACGCGATAAGAGACATGGGCATCAGGGACGAAAACATCAATAACTGCGGGTCTTTCTTTGCCATTGGCGAAACCTTTTCGGACACCACCAACTCGACGCTATACGCGCTCGAGCGCCTCACTGCCGCCGGAGAAGGTAAACGCAGTAAGGAGGACCTGGAAACTGTGCACAAGTGGACCAAGAATTTGGAGACCCAATACGATGAGACCGCGAGCAAGTGCAAGTTAGGTGATCTGTT-CAAGTACGGTGACAAGAAGGTTCCCACCGTTTGGGTCATAGACCTGCTCACGACCACAGCCATCCGCCTCCTCAATGCCATAAAGCCATGATTGATCGATCGATCATCCCTTCAATCTTAGCTATATATACCTTCCACTAAATTTTTTTTATTTATATTTTGGATAATTCCCATGATATATATGTAATAAGTGCGTGATGCGCATGGATATCGCATGCATGCTGCATTTGTAACATTGTTATCAATATTTGAAAATATTTTTTTCAATATTGTAATTACTAGCAAAGTGTGTCGATGTGTTGTAACGGACCGAAAAACCAAAATGCAATAATGGTTAAGCTGACAAA] [+] EMBL AK070815 [ACTAATCCATCCTGTAGCTTCTAATCAAACTGAGAGGGAGAGAGATCAGAGAGAGCGCATATAAATACAATGAGCAGGTCGAGCATGGCCGCTGTCTTCCTGGTGGTGTTGATAGCCATCAACGTCGTCTGCTTATCCCCACAAGGTGCAACTGCAGCGCCAGAGGGGGAACTTCATAAACTCAACCTTGAGCTGCCACCGCCGTTGCCGCCTGGGAAGGAACCCTCAACGGAGGCGTACCGGTTCACCCAACAAGTCTGCGGTTTTGGAACTAGCACCTTCACGGAACAGATGATCGGTGCCCGCTGCTACGATGTACTCATCCCGTATGGCGAGTCATTCAAGGGCAACCAAGTGAAGGCCACTCAGGTGGCCACCATCATCTTAGTCACCAAGATCCAAGCCCTCACTAGTGAGGCGTACGCGATAAGAGACATGGGCATCAGGGACGAAAACATCAATAACTGCGGGTCTTTCTTTGCCATTGGCGAAACCTTTTCGGACACCACCAACTCGACGCTATACGCGCTCGAGCGCCTCACTGCCGCCGGAGAAGGTAAACGCAGTAAGGAGGACCTGGAAACTGTGCACAAGTGGACCAAGAATTTGGAGACCCAATACGATGAGACCGCGAGCAAGTGCAAGTTAGGTGATCTGTT CAAGTACGGTGACAAGAAGGTTCCCACCGTTTGGGTCATAGACCTGCTCACGACCACAGCCATCCGCCTCCTCAATGCCATAAAGCCATGATTGATCGATCGATCATCCCTTCAATCTTAGCTATATATACCTTCCACTAAATTTTTTTTATTTATATTTTGGATAATTCCCATGATATATATGTAATAAGTGCGTGATGCGCATGGATATCGCATGCATGCTGCATTTGTAACATTGTTATCAATATTTGAAAATATTTTTTTCAATATTGTAATTACTAGCAAAGTGTGTCGATGTGTTGTAACGGACCGAAAAACCAAAATGCAATAATGGTTAAGCTGAC ] [+] EMBL C73246 [ CTTCTAATCAAACTNAGAGGGAGANAGATCAGAGAGAGCGCATATAAATACAATGAGCAGGTCGAGCATGGCCGCTGTNTTCCTGGTGGTGTTGATAGCCATCAACGTCGTCTGCTTATCCCCACAAGGTGCAACTGCAGCGCCAGAGGGGGAACTTCATAAACTCAACCTTGAGCTGCCACCGCCGTTGCCGCCTGGAAAGGAACCCTCAACGGAGGCGTACCGGTTCACCCAACAAGTCTGCNATTTTGGAACTAGCACCTTCACGGAACANATGATCGGTGCCCGCTGCTACGATGTACTCATCCCGTATGGCGAGTCATTCAAGGGCAACCAAGTTAAGGCCACTCAGGTGGCCACCATCATCTTAGTCACCAAGATCCAAGCCCTCATTAGTTAGGCGT ] [+] EMBL AU162212 [ GGAGAGAG TCAGAGAGAGCGCATATAAATACAATGAGCAGGTCGAGCATGGCCG TGTCTTCCTGGTGGTGTTGATAGCCATCAACGTCGTCTGCTTATCCCCACAAGGTGCAACTGCAGCGCCAGAGGGGGAACTTCATAAACTCAACCTTGAGCTGCCACCGCCGTTGCCGCCTGGGAAGGAACCCTCAACGGAGGCGTACCGGTTCACCCAACAAGTCTGCGATTTTGGAACTAACACCTTCACGGAACA ATGATCGGTG CCG TGCTACG TGTACTCATCCCCNATGGCGAANCATTCAAGGGCAACCAAGTTAAAGGCACTCAAGTGGGCACC ] [+] EMBL AU094164 [ cCCAAGTGAAGGCCACTCAGGTGNCCACCATCATCTTAGTCACCAAGATCCAAGCCCTCACTAGTGAGGCGTACGCGATAAGAGACATGGGCATCAGGGACGAAAACATCAATAACTGCGGGTCTTTCTTTGCCATTGGCGAAACCTTTTCGGACACCACCAACTCGACGCTATACGCGCTCGAGCGCCTCACTGCCGCCGGAGAAGGTAAACGCAGTAAGGAGGACCTGGAAACTGTGCACAAGTGGACCAAGAATTTGGAGACCCAATACGATGAGACCGCGAGCAAGTGCAAGTTAGGTGATCTGTT CAAGTACGGTGACAAGAAGGTTCCCACCGTTTGGGTCATAGACCTGCTCACGACCACAGCCATCCGCCTCCTCAATGCCATAAAGCCATGATTGATCGATCGATCATCCCTTCAATCTTAGCTATATATACCTTCCACTAAATTTTTTTTATTTATATTTTGGATAATTCCCATGATATATATGTAATAAGTGCGTGATGCGCATGGATATCGCATGCATGCTGCATTTGTAACATTGTTATCAATATTTGAAAATATTTTTTTCAAaaaaa ] [+] EMBL C99122 [ GCCAGTTAGGTGATCTGTTCCAAGTACGGTGACAAGAAGTTCCCCACCGTTTGGGTCATAGACCTGCTCACGACCACAGCCACCCGCCTCCTCAATGCCATAAAGCCATGATTGATCGATCGATCATCCCTTCAATCTTAGCTATATATACCTTCCACTAAATTTTTTTTATTTATATTTTGGATAATTCCCATGATATATATGTAATAAGTGCGTGATGCGCATGGATATCGCATGCATGCTGCATTTGTAACATTGTTATCAATATTTGAAAATATTTTTTTCAATATTGTAATTACTAGCAAAGTGTGTCGATGTGTTGTAACGGACCGAAAAACCAAAATGCAATAATGGTTAAGCTGAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||