These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8779#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1293 fasta sequence [GCCTTCATCTAGCCACGCAATTCTCCCCCAAAATTTCCCCCACAACAACGACCCGCCATTACTGCCCCTGTGCGCCTCGCCTCGCCACCGAACCGCCGCGAGCACCCGGAGGAAGAGAATCGAATCGAGGCGAGAGGAGGAGCAATGGCGACGGCGAGGACGCTGGCGGCTGCGGCGGCGGCGGCGAGGGCGTTCTCGTTGACGGCGACATCCGGCGGCGGCGTGTCCATGGTGCAGGGCGCGTCCCGCGGCATCGGGCTCGAGTTCGTGAGGCAGCTGCTGAAGAGGAGCGACGAGGGCCGCGTCGTCGCGACGTGTCGCGCGCCGGATTCAGCCGTGGAGCTTCAGAAGCTGAGGCAGGAGCACGAGCAGCGCCTCGCCGTGCTCCCGCTCGACGTCACCGACGAGAGCACCATAGAGGCAGCTGCGGCCTCGATAGGAGAGACCCATGGATCTCTGAACCTGCTGATCAATGCAACTGGGATCCTTTCAATTCCGAATGTGATACATCCAGAGACTACATTTAGCAAAGTTCAGAAGTCATCCCTGCTACTGGCATATGAAGTGAACGCTGTTGGCCCTATTTTAGTGATCAAGCATATGTGG-CCA-TTCCTGAAGGC-TGGAGGTTGC-TCTGAGACCGGGAGAGGA-TTTTCATTGGTTGCAAACATGAGTGCCAGAGTCGGTTCAATAGGTGACAATGGCCTAGGAGGCTGGCATTCATATAGGGCTTCTAAAACAGCACTGAATCAATTGACAAAGACTGTATC-AGTTGAGCTGGGGAAAAAGGACAACATTGCCTGCATCCTGCTGCATCCAGGAACCGTGGACACTGACCTCTCACGCCCTTTTCAGAAGAATGTTCCCAAGGATAAGCTCTTCACAAGGGA-GTTCTCTGTTCAGAAGCTACTGTCCATCATCGACAATGTCAA-GAAGAGCGACAACGGCAAGTTCTTCGCTTGGGATGGACAAGAAATCCCATGGTGATATCAATCAGCACTTCAGCAGAGCAAGTGAGCAACAGTGTCCAAAATTTGTGCTCAATATTTTCTCAGCCTTTATTGTGTTGTTGGCACCAAATAGATCGTGTCAATGCTCGATTTGAATTCTATTTGGATCTACGATGATCTGAACATAACAAACCAAAATCCATTTTCTTTTCGCTTCCTTTTTAGATGCATACAAATGATCGATGTAACTTTCTTTTGCCACTGGTGGCACAACAGTTAACCCAGTGTAATTAGCTGCAAC-GTATTNTGAAAAAAAAAAATGTTGAAAAACTTCCAGCCAAAAAAA] [+] EMBL AK071747 [GCCTTCATCTAGCCACGCAATTCTCCCCCAAAATTTCCCCCACAACAACGACCCGCCATTACTGCCCCTGTGCGCCTCGCCTCGCCACCGAACCGCCGCGAGCACCCGGAGGAAGAGAATCGAATCGAGGCGAGAGGAGGAGCAATGGCGACGGCGAGGACGCTGGCGGCTGCGGCGGCGGCGGCGAGGGCGTTCTCGTTGACGGCGACATCCGGCGGCGGCGTGTCCATGGTGCAGGGCGCGTCCCGCGGCATCGGGCTCGAGTTCGTGAGGCAGCTGCTGAAGAGGAGCGACGAGGGCCGCGTCGTCGCGACGTGTCGCGCGCCGGATTCAGCCGTGGAGCTTCAGAAGCTGAGGCAGGAGCACGAGCAGCGCCTCGCCGTGCTCCCGCTCGACGTCACCGACGAGAGCACCATAGAGGCAGCTGCGGCCTCGATAGGAGAGACCCATGGATCTCTGAACCTGCTGATCAATGCAACTGGGATCCTTTCAATTCCGAATGTGATACATCCAGAGACTACATTTAGCAAAGTTCAGAAGTCATCCCTGCTACTGGCATATGAAGTGAACGCTGTTGGCCCTATTTTAGTGATCAAGCATATGTGG CCA TTCCTGAAGGC TGGAGGTTGC TCTGAGACCGGGAGAGGA TTTTCATTGGTTGCAAACATGAGTGCCAGAGTCGGTTCAATAGGTGACAATGGCCTAGGAGGCTGGCATTCATATAGGGCTTCTAAAACAGCACTGAATCAATTGACAAAGACTGTATC AGTTGAGCTGGGGAAAAAGGACAACATTGCCTGCATCCTGCTGCATCCAGGAACCGTGGACACTGACCTCTCACGCCCTTTTCAGAAGAATGTTCCCAAGGATAAGCTCTTCACAAGGGA GTTCTCTGTTCAGAAGCTACTGTCCATCATCGACAATGTCAA GAAGAGCGACAACGGCAAGTTCTTCGCTTGGGATGGACAAGAAATCCCATGGTGATATCAATCAGCACTTCAGCAGAGCAAGTGAGCAACAGTGTCCAAAATTTGTGCTCAATATTTTCTCAGCCTTTATTGTGTTGTTGGCACCAAATAGATCGTGTCAATGCTCGATTTGAATTCTATTTGGATCTACGATGATCTGAAC ] [+] EMBL AU166136 [ CTGCCCCTGTGCGCCTCGCCTCGCCACCGAACCGCCGCGAGCACCCGGAGGAAGAGAATCGAATCGAGGCGAGAGGAGGAGCAATGGCGACGGCGAGGACGCTGGCGGCTGCGGCGGCGGCGGCGAGGGCGTTCTCGTTGACGGCGACATCCGGCNGCGGCGTGTCCATGGTGCAGGGCGCGTCCCG GGCATCGGGCTCGAGTTCGTGAGGCAGCTGCTGAAGAGGANCGACGAAGGCCG ] [+] EMBL OSS16490A [ CAGAAGTCATCCCTGCTACTGGCATATGAAGTGAACGCTGTTGGCCCTATTTTAGTGATCAAGCATATGTGG CCA TTCCTGAAGGC TGGAGGTTGC TCTGAGACCGGGAGAGGA TTTTCATTGGTTGCAAACATGAGTNCCAGAGTCGGTTCAATAGGTGACAATGGCCTAGGAGGCTGGCATTCATATAGGGCTTCTAAAACAGCACTGAATCAATTGACAAAGACTGTATCAAGTTGAGCTGGGGAAAAAGGACANCATTGNCTGCATCCTGCTGCATCCAGGAACCGTGGACACTGACCTCTCACGGCC TTTCAGANGAATGTTCCCANGGATAAGGTC TCACANGGGAGGTTCTCTGGTCAGAAGCTACTGTCCATCATCGGCAATGTCAAGGAAGAGCG CAACGGC ] [+] EMBL AU089822 [ TTAGTGATCAAGCATATGTGGCCCATTTCCTGAAGGCTTGGAGGTTGCTTNTGAGACCGGGAGAGGATTTTTCATTGGTTGCAAACATGAGTGCCAGAGTCGGTTCAATAGGTGACAATGGCCTAGGAGGCTGGCATTCATATAGGGCTTCTAAAACAGCACTGAATCAATTGACAAAGACTGTATC AGTTGAGCTGGGGAAAAAGGNCAACATTGCCTGCATCCTGCTGCATCCAGGAACCGTGGACACTGACCTCTCACGCCCTTTTCAGAAGAATGTTCCCAAGGATAAGCTCTTCACAAGGGA GTTCTCTGTTCAGAAGCTACTGTCCATCATCGACAATGTCAA GAAGAGCGACAACGGCAAGTTCTTCGCTTGGGATGGACAAGAAATCCCATGGTGATATCAATCAGCACTTCAGCAGAGCAAGTGAGCAACAGTGTCCAAAATTTGTGCTCAATATTTTCTCAGCCTTTATTGTGTTGTTGGCACCAAATAGATCGTGTCAATGCTCGATTTGAATTCTATTTGGATNTACGATGATCTGAACATAACAAACCAAAATCCATTTTCTTTTCGCTTCCTTTTTAGATGCATACAAATGATCGATGTAACTTTCTTTTGCCACTGGTGGCACAACAGTTAACCCAGTGTAATTAGCTGCAAC GTATTNTGAAAAAAAAAA ] [+] EMBL AU172869 [ AAGGATAAGCTCTTCACAAGGGA GTTCTCTGTTCAGAAGCTACTGTCCATCATCGACAATGTCAA GAAGAGCGACAACGGCAAGTTCTTCGCTTGGGATGGACAAGAAATCCCATGGTGATATCAATCAGCACTTCAGCAGAGCAAGTGAGCAACAGTGTCCAAAATTTGTGCTCAATATTTTCTCAGCCTTTATTGTGTTGTTGGCACCAAATAGATCGTGTCAATGCTCGATTTGAATTCTATTTGGATCTACGATGATCTGAACATAACAAACCAAAATCCATTTTCTTTTCGCTTCCTTTTTAGATGCATACAAATGATCGATGTAACTTTCTTTTGCCACTGGTGGCACAACAGTTAACCCAGTGTAATTAGCTGCAACTGTATTCTGATGGATGTATATGTTGAAAAACTTCCAGCCAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||