These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8786#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1240 fasta sequence [CAAGCTCGTCTCGTTGATCAATGGCATCAGACAAGTGCTCATCGTTTCTACTAGCAGCGGCAGCGGCTGCAGTGCTCGTCCTCGCGTCGGCGCCGGTGGCTCATTCGTGGAGCAAGGAGGGTCACATGCTCACATGCCGAATCGCGCAGGATCTGCTGGAGCCAGCCGCGGCGCACGCGGTGAGGAACCTGCTGACGGAGGAGGCGGACGGCGACCTGTCGGCGCTGTGCGTGTGGCCGGATCAGGTCAGGCACTGGTACAAGTACAGGTGGACGAGCCCTCTCCACTTCATCGACACCCCTGACAAAGCCTGCAGCTTCGTCTACTCAAGGGATTGCCATGGCGCGGATGGTGCGGAGGATATGTGCGTCGCTGGCGCGATCGCGAACTTCACCTCTCAGCTTATGCACTATAATCACGGCAGCGCCGATCGCAAATATAACATGACTGAAGCACTGCTATTCTTGTCACACTTCAT-GGGAGATGTTCATCAGCCAATGCATGTTGGGTTCACGAGCGACCAAGGGGGCAATACGATTAATCTACGCTGGTTCAGGCACAAATCCAATCTCCATCATGTGTGGGATA-GGGAGATGATACTCACAGCTATTGCTGAATTCTACGGCAAGGACATGGATGCGTTTCAAAAGGACCTTGTGCACAACTTCACCACGGGAACGTGGTCTGATGACGTATCCTCTTGGGGAGACTGCGAGGATCTCCTGTCTTGCTCAACCAAGTACGCTACAGAGAGCATAAATTTGGCTTGCAAATGGGCGTACAACGATGTCCGTGAAGGCGAAACTCTGTCAGATGACTACTTCGGCTCACGGCTCCCGATCGTGACACGACGAATCGCGCAGGGGGGAGTTAGGCTGGCCATGTTCTTGAATCGGCTCTTCGGGGAGCACAACCGTGACGTCGCATCACCAGCCTGAACTGATAGCTGCTTCAGAATTCAGAAAATTCAGAAGTTAACCACACGTGTAATCTAACGGCCGCATCCATTTCATTTTATTTTTACGTGATACGTGACTCTATTTTTACGATGAATAGTTGATGCCAACAATGCTGATTAATTAACCACATAGTAATACAAGTAAGCAACGCTTGAAATCAACAGGACATAGCAAACCAATTCCATTCTTTTCTGATCATAAAGAGATGTACATCCACATGTATGATTAATTGTATCTAGACAAGATTCAATGACTATACTACTCTCATTGCACCAAAAAAA] [+] EMBL AK099573 [CAAGCTCGTCTCGTTGATCAATGGCATCAGACAAGTGCTCATCGTTTCTACTAGCAGCGGCAGCGGCTGCAGTGCTCGTCCTCGCGTCGGCGCCGGTGGCTCATTCGTGGAGCAAGGAGGGTCACATGCTCACATGCCGAATCGCGCAGGATCTGCTGGAGCCAGCCGCGGCGCACGCGGTGAGGAACCTGCTGACGGAGGAGGCGGACGGCGACCTGTCGGCGCTGTGCGTGTGGCCGGATCAGGTCAGGCACTGGTACAAGTACAGGTGGACGAGCCCTCTCCACTTCATCGACACCCCTGACAAAGCCTGCAGCTTCGTCTACTCAAGGGATTGCCATGGCGCGGATGGTGCGGAGGATATGTGCGTCGCTGGCGCGATCGCGAACTTCACCTCTCAGCTTATGCACTATAATCACGGCAGCGCCGATCGCAAATATAACATGACTGAAGCACTGCTATTCTTGTCACACTTCAT GGGAGATGTTCATCAGCCAATGCATGTTGGGTTCACGAGCGACCAAGGGGGCAATACGATTAATCTACGCTGGTTCAGGCACAAATCCAATCTCCATCATGTGTGGGATA GGGAGATGATACTCACAGCTATTGCTGAATTCTACGGCAAGGACATGGATGCGTTTCAAAAGGACCTTGTGCACAACTTCACCACGGGAACGTGGTCTGATGACGTATCCTCTTGGGGAGACTGCGAGGATCTCCTGTCTTGCTCAACCAAGTACGCTACAGAGAGCATAAATTTGGCTTGCAAATGGGCGTACAACGATGTCCGTGAAGGCGAAACTCTGTCAGATGACTACTTCGGCTCACGGCTCCCGATCGTGACACGACGAATCGCGCAGGGGGGAGTTAGGCTGGCCATGTTCTTGAATCGGCTCTTCGGGGAGCACAACCGTGACGTCGCATCACCAGCCTGAACTGATAGCTGCTTCAGAATTCAGAAAATTCAGAAGTTAACCACACGTGTAATCTAACAGCCGCATCCATTTCATTTTATTTTTACGTGATACGTGACTCTATTTTTACGATGAATAGTTGATGCCAACAATGCTGATTAATTAACCACATAGTAATACAAGTAAGCAACGCTTGAAATCAACAGGACATAGCAAACCAATTCCATTCTTTTCTGATCATAAAGAGATGTACATCCACATGTATGATTAATTGTATCTAGACA ] [+] EMBL AK061848 [ AAGCTCGTCTCGTTGATCAATGGCATCAGACAAGTGCTCATCGTTTCTACTAGCAGCGGCAGCGGCTGCAGTGCTCGTCCTCGCGTCGGCGCCGGTGGCTCATTCGTGGAGCAAGGAGGGTCACATGCTCACATGCCGAATCGCGCAGGATCTGCTGGAGCCAGCCGCGGCGCACGCGGTGAGGAACCTGCTGACGGAGGAGGCGGACGGCGACCTGTCGGCGCTGTGCGTGTGGCCGGATCAGGTCAGGCACTGGTACAAGTACAGGTGGACGAGCCCTCTCCACTTCATCGACACCCCTGACAAAGCCTGCAGCTTCGTCTACTCAAGGGATTGCCATGGCGCGGATGGTGCGGAGGATATGTGCGTCGCTGGCGCGATCGCGAACTTCACCTCTCAGCTTATGCACTATAATCACGGCAGCGCCGATCGCAAATATAACATGACTGAAGCACTGCTATTCTTGTCACACTTCAT GGGAGATGTTCATCAGCCAATGCATGTTGGGTTCACGAGCGACCAAGGGGGCAATACGATTAATCTACGCTGGTTCAGGCACAAATCCAATCTCCATCATGTGTGGGATA GGGAGATGATACTCACAGCTATTGCTGAATTCTACGGCAAGGACATGGATGCGTTTCAAAAGGACCTTGTGCACAACTTCACCACGGGAACGTGGTCTGATGACGTATCCTCTTGGGGAGACTGCGAGGATCTCCTGTCTTGCTCAACCAAGTACGCTACAGAGAGCATAAATTTGGCTTGCAAATGGGCGTACAACGATGTCCGTGAAGGCGAAACTCTGTCAGATGACTACTTCGGCTCACGGCTCCCGATCGTGACACGACGAATCGCGCAGGGGGGAGTTAGGCTGGCCATGTTCTTGAATCGGCTCTTCGGGGAGCACAACCGTGACGTCGCATCACCAGCCTGAACTGATAGCTGCTTCAGAATTCAGAAAATTCAGAAGTTAACCACACGTGTAATCTAACGGCCGCATCCATTTCATTTTATTTTTACGTGATACGTGACTCTATTTTTACGATGAATAGTTGATGCCAACAATGCTGATTAATTAACCACATAGTAATACAAGTAAGCAACGCTTGAAATCAACAGGACATAGCAAACCAATTCCATTCTTTTCTGATCATAAAGAGATGTACATCCACATGTATGATTAATTGTATCTAGACAAGATTCAATGACTATACTACTC ] [+] EMBL CF333886 [ CTCGTCTCGTTGATCAATGGCATCAGACAAGTGCTCATCGTTTCTACTAGCAGCGGCAGCGGCTGCAGTGCTCGTCCTCGCGTCGGCGCCGGTGGCTCATTCGTGGAGCAAGGAGGGTCACATGCTCACATGCCGAATCGCGCAGGATCTGCTGGAGCCAGCCGCGGCGCACGCGGTGAGGAACCTGCTGACGGAGGAGGCGGACGGCGACCTGTCGGCGCTGTGCGTGTGGCCGGATCAGGTCAGGCACTGGTACAAGTACAGGTGGACGAGCCCTCTCCACTTCATCGACACCCCTGACAAAGCCTGCAGCTTCGTCTACTCAAGGGATTGCCATGGCGCGGATGGTGCGGAGGATATGTGCGTCGCTGGCGCGATCGCGAACTTCACCTCTCAGCTTATGCACTATAATCACGGCAGCGCCGATCGCAAATATAACATGACTGAAGCACTGCTATTCTTGTCACACTTCATGGGGAGATGTTCATCAGCCAATGCATGTTGGGTTCACGAGCGACCAAGGGGGCAATACGATTAATCTACGCTGGTTCAGGCACAAATCCAATCTCCATCATGTGTGGGATANGGGAGATGATACTCACAGCTATTGCTGAATTCTACGGCAAGGACATGGATGCGTTTCAAAAGGACCTTGTGCACAACTTCACCACGGGAACGTGGTCTGATG ] [+] EMBL CF276413 [ TCGTTGATCAATGGCATCAGACAAGTGCTCATCGTTTCTACTAGCAGCGGCAGCGGCTGCAGTGCTCGTCCTCGCGTCGGCGCCGGTGGCTCATTCGTGGAGCAAGGAGGGTCACATGCTCACATGCCGAATCGCGCAGGATCTGCTGGAGCCAGCCGCGGCGCACGCGGTGAGGAACCTGCTGACGGAGGAGGCGGACGGCGACCTGTCGGCGCTGTGCGTGTGGCCGGATCAGGTCAGGCACTGGTACAAGTACAGGTGGACGAGCCCTCTCCACTTCATCGACACCCCTGACAAAGCCTGCAGCTTCGTCTACTCAAGGGATTGCCATGGCGCGGATGGTGCGGAGGATATGTGCGTCGCTGGCGCGATCGCGAACTTCACCTCTCAGCTTATGCACTATAATCACGGCAGCGCCGATCGCANATATAACATGACTGAAGCACTGCTATTCTTGTCA ] [-] EMBL CF276412 [ CAAGTACGCTACAGAGAGCATAAATTTGGCTTGCAAATGGGCGTACAACGATGTCCGTGAAGGCGAAACTCTGTCAGATGACTACTTCGGCTCACGGCTCCCGATCGTGACACGACGAATCGCGCAGGGGGGAGTTAGGCTGGCCATGTTCTTGAATCGGCTCTTCGGGGAGCACAACCGTGACGTCGCATCACCAGCCTGAACTGATAGCTGCTTCAGAATTCAGAAAATTCAGAAGTTAACCACACGTGTAATCTAACGGCCGCATCCATTTCATTTTATTTTTACGTGATACGTGACTCTATTTTTACGATGAATAGTTGATGCCAACAATGCTGATTAATTAACCACATAGTAATACAAGTAAGCAACGCTTGAAATCAACAGGACATAGCAAACCAATTCCATTCTTTTCTGATCATAAAGAGATGTACATCCACATGTATGATTAATTGTATCTAGACAAGATTCAATGACTATACTACTCTCATTGCACCAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||