cluster # 880

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Oryza sativa
cluster # 880 cluster # 880 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_880#0 length = 651 sequences # 2

consensusID : consensus_880#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 651
fasta sequence

                              [AAATTACCCCCCNTAAGGGACCAAAGNGGAGCCCCCCCCGGGGGCGCCCCCTCTAAAANTAGNGGTCCCCNGNNNNGCAGAATTNGNCNNNAGNCAGTTACACCCTTATTTTTTCTTNTCCNTCNTCCNTCCTTCCCACCTCCCCACCTCCCTTTGNAACGGTGGGCNCGAAGTNCCGCCGCCCCCCTTGCGGCGTGGGCNCGGAGGCCGCCCGCCCGGCNNGGCGGCGCGGCGAGCGGA-GGC-GGCNAAGCGACNNGGCGGCGTACTGGCGGCT-GCGNCCTCGCGGCGNCGGCCGAGAACGCNCC-GGCGGTGCGCGACGGCCCGGCNCACGGAGGGCTGGGCGAGATGGCGTGGCGGCGCGCTGGCGGCTGGCGNCCTCGCGGCGGAGCTGGGNACGCGGCGGGCGGCGCTCCGGCGGCCGCCGCGGCAGTGGGCCGTTCGTCTTCTTTCTTTTTTTTTTGGTTGAGAATCTGTGATTNGGATNTGAGATGATTTGTGTGTGATGTGAATATGTGATGTATTTGATTTGTGTGTGATGTGAATATGTGATGTATTTGTGATGAATTTTGTAGAAGTTGTAATGTAATTTTTTAAGATTTTGTGATGTATTTAGAGATATTGATTTGAGAATTTGGAGACTATTCGGGGAAN]

[+] EMBL AT003529             [AAATTACCCCCCNTAAGGGACCAAAGNGGAGCCCCCCCCGGGGGCGCCCCCTCTAAAANTAGNGGTCCCCNGNNNNGCAGAATTNGNCNNNAGNCAGTTACACCCTTATTTTTTCTTNTCCNTCNTCCNTCCTTCCCACCTCCCCACCTCCCTTTGNAACGGTGGGCNCGAAGTNCCGCCGCCCCCCTTGCGGCGTGGGCNCGGAGGCCGCCCGCCCGGCNNGGCGGCGCGGCGAGCGGA GGC GGCNAAGCGACNNGGCGGCGTACTGGCGGCT GCGNCCTCGCGGCGNCGGCCGAGAACGCNCC GGCGGTGCGCGACGGCCCGGCNCACGGAGGGCTGGGCGAGATGGCGTGGCGGCGCGCTGGCGGCTGGCGNCCTCGCGGCGGAGCTGGGNACGCGGCGGGCGGCGCTCCGGCGGCCGCCGCGGCAGTGGGCCGTTCGTCTTCTTTCTTTTTTTTTTGGTTGAGAATCTGTGATTNGGATNTGAGATGATTTGTGTGTGATGTGAATATGTGATGTATTTGATTTGTGTGTGATGTGAATATGTGATGTATTTGTGATGAATTTTGTAGAAGTTGTAATGTAATTTTTTAAGATTTTGTGATGTATTTAGAGATATTGATTTGAGAATTTGGAGACTATTCGGGGAAN]
[-] EMBL CB640835             [                                                                                                                                                                                                                                          AGCGGAGGGCGGGCGAAGCGACGCGGCGGCGTACTGGCGGCTGGCGGCCTCGCGGCGGCGGCCGAGGACGCGCCGGGCGGTGCGCGGCGGCGCGGCGCACGGAGGGCTGGGCGAAACGGCGTGGCGGCGCGCTGGCGGCTGGCGGCCTCGCGGCGGAGCTGGGGACGCGGCGGGCGGCGCTCCGGCGGCCGCCGCGGCAGTGGGCCGTTCGTCTTCTTTCTTTTTTTTTTGGTTGAGAATCTGTGATTCGGATCTGAGATGATTTGTGTGTGATGTGAATATGTGATGTATTTGATTTGTGTGTGATGTGAATATGTGATGTATTTGTGATGAATTTTGTAGAAGTTGTAATGTAATTTTTTAAGATTTTGTGATGTATTTAGAGATAT                                ]




>consensus_880#0
AAATTACCCCCCNTAAGGGACCAAAGNGGAGCCCCCCCCGGGGGCGCCCCCTCTAAAANT
AGNGGTCCCCNGNNNNGCAGAATTNGNCNNNAGNCAGTTACACCCTTATTTTTTCTTNTC
CNTCNTCCNTCCTTCCCACCTCCCCACCTCCCTTTGNAACGGTGGGCNCGAAGTNCCGCC
GCCCCCCTTGCGGCGTGGGCNCGGAGGCCGCCCGCCCGGCNNGGCGGCGCGGCGAGCGGA
GGCGGCNAAGCGACNNGGCGGCGTACTGGCGGCTGCGNCCTCGCGGCGNCGGCCGAGAAC
GCNCCGGCGGTGCGCGACGGCCCGGCNCACGGAGGGCTGGGCGAGATGGCGTGGCGGCGC
GCTGGCGGCTGGCGNCCTCGCGGCGGAGCTGGGNACGCGGCGGGCGGCGCTCCGGCGGCC
GCCGCGGCAGTGGGCCGTTCGTCTTCTTTCTTTTTTTTTTGGTTGAGAATCTGTGATTNG
GATNTGAGATGATTTGTGTGTGATGTGAATATGTGATGTATTTGATTTGTGTGTGATGTG
AATATGTGATGTATTTGTGATGAATTTTGTAGAAGTTGTAATGTAATTTTTTAAGATTTT
GTGATGTATTTAGAGATATTGATTTGAGAATTTGGAGACTATTCGGGGAAN

clustalw multiple alignements is not computed in this case