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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8814#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2912 fasta sequence
[TTGCCGGTGGCGCGCCTTTGGGCCCATGGCCATGGCGCACATGCTTGGATGGGCCGGCCCGTCGCTCCACGCCTCGGATCACCACTGTCTTCGCCCGCGGCGGCGCACGCCGCCGCCGGAGCCCCTGCCCCCTCTCGGGCGGCGCGGCGGGGACCGGGGCTCACCGCGGCCATGCGCTGTTCTTGCTATCCCTCTCGTCAGTTTGTGCCCTCACCCTGATGATTTCCGTTTCACTAGCCTTGCACTTCTTGTCTTCTTCCACTCAACAGGTTGGCGCTAGGTTTTGCCGATTGGGGATGAACTCGTGACGAAATTGCAATGTGGGGCTCTCTCTCGGTAATGGATTGGAGAAGTGATGAACGGCGAGCTTAAACTTATGGCTTCCTATGTGAGCAAGCTTAAGTTCATCTTGCAAAAAGATCAGCAGCAGGAGCCCCATACTGCGAACCTTCTAGTCCTACTTGGGAGTAGCAATCAGGACAAAAGAAATGGCCTCTCACAGGGAGAAAACAGAATGGACACTTGTACCAGAAAGAAGCCAAGAAGATACCAACTCCTCACCATGCAACAAAAAGAAACGCTTAATCGTGCATTTCAATCATGTCCGAACCCTGATAGAAATGACTTGAAGAAGTTGGCCAAGGAACTAAACATGACTGAGACCCAAATCAAATATTGGTTCCAGAACTGCAGGACAAAGATGAAGAAATTCAAGAACAATGAGGAGCGCAAACTACTGCAGAAGGAGAATGAGGAGCTAAAGAAGGAGAATGCAGAGTTGAGAAATAGGATGAAGAACTCAACATGCCGCGCTTGTGACCTCCCTTTGTTCCATATAGATTGCCGTCATTGGGAGAATCCAATGCTCAACAAGGGTAATCATGGCGTTACAAGTAATCTCATTCCTCAGGCAGTGTCATCCTTGCTCCCCAGCTCAAGTGGTTTTGTAGCTTCAGGCTCCAATCTTAGTAGCAATGCTGTGCTCATGCCCGTATCTGCCATGCCATCATCAGTTTTGCAGCCTGCTCCAGCCGTCTCTGGTGCCAATTTTCCCATCTTGCACAATCTATCTGCCAATGCAAATGATGGCTATACGGAAAAAAACGTACTTCTTGATCTGGCGAACCGTGCAATGGAAGAGTTCTTTAGTCTAATGAAGGAGAATGAGTCTCTTCTTGTCAAAAAAAAGGAGAATGGGCCTCTCTGGCTCCCACACATGGATATTCTGGGAGTCGAATCACTTAACTACCAGGAATACCTTGCAAAATCCAGGACGATTGGACAAAAACCTGTTGACTTCAAAGTGGTCGTCACCAGGGACACTGCCATTGTCAATGGTAGCTGTGTTGACCTCGTCAAAAGCCTTTTGGATGCTAACCGCTGGAGAGAGTTGTTTCCAGGCATCGTGGCAAGTGCAAACACCACCAAGATCATCTCTACTGGGCCCTCTAACTTGCACGACGGGTTGCTTCAATTGATGCGTGCAGAGCTCCAGGTAATGTCACCTGAAGTCCCAGTTTGCGATGTGACATTCTTGAGGCAGAGTGTGCAGTTTGGAAGTGGACTGTGGTGTGTGGTTGATGTGTCTATTGATACCATCCTTCCTGGAGAGAGTAAAACAGCTCAGTCCAGTGTGCAGACCAGCAGTACAGCTGCCAGACGCATGGAAGTCAGGCTGTTGCCATCAGGCTGTGTTATTGAAGAAATGGAGAATGGCTATTCCAAGGTGACCTGGATGGTGCATGCAGCTTATGATGAGAGAGCAGTGCCAGTGCTTTATCATTCACTTCTCCGCTCTGCAAAAGCCCTTGGTGCGTGCCGCTGGGTAGCATCACTCCAGAGACACAGCCAGTTCCTTTCCGGCCTGCACAAATACATCTTTTGTCCTGACAGCACAATGACAGAAGTGGTGATGCGAAGAAAAGTCCTGTACCTGGTGAAGCAGATGACGAGCAGCTTCACAGGCCTATTTGCGTCGATGTCTAAGGCCACGCTGCAAGATGGTGATGATACTCACTTCGCGCATCAGATAGTTGGTGGTGCAACAGGTGAACCTGCCGGACTGCTGCTGAGCGCCACCACAACCATATGGCTCCCCGGCGTGAACCCGAGGCACGTGTATGACCACCTGCGTGATGAGCAGTGCCATGGTGAATGGCGCTGCCTCCTCGGTGAGCAGCTGCATCAGGGCAATGCCTTGCCGTATGGTGCCCCCCTGAATGGTGAGACCGTGCCAGAGTTCTATCGCATGGTGAACGGGCTGCATGAAGGGCATGCTATCTCCCTGATCAGCCCCAGAGAAATGGGTGGTAACATAAGCAACACTCTGCTCCTGCAAGAGGCAAGAACTGATCTTTCTGGCTCCCTCATAGTTTACGCCAGGACAGATGTGAACACCGTGCATTCCATCATGAACAGTGGCCTCAACCCTGCCACCGTCTTCCTCGTATCCTCTGGATGTGCCATTCTTCCTGATTGCCTGGAATCATTCCCTCTACACCCAGCTGCAACTGCAGATCAGGCCGGCACCTCCAGTGCCGCTATCGCTAGCAGGAGCGAAACCGGTGGGTCATTCGTCACCGTCACTTACCAGATGTTTTTCAGCAGCCAAGGTGGCGCAGCACCTGCCAGCTCATCAATTCATCAAGGCCGTGATGCGCTCAAGAAAGCCACCGACATTTTCAA-GGTGGTCCTCGACACTCTCACCGTGGCATAGCGCAATACCCCAGGGGTAGCATTTGCATGCGAAAGTGAAATCCAGATCGAGTTAAATTTCAGTGTTTAAGACTATGT-TGTTTCTGTTGTTCAGGGGAT-GGCTTTATCTC-TGATAGACCCGTGGATCATGCTGTTTACCTTGTTTACCATTTTCAGACTATCGATTTGAAATGTTGATCAGACATTTATAATAATTG]
[+] EMBL C72532 [TTGCCGGTGGCGCGCCTTTGGGCCCATGGCCATGGCGCACATGCTTGGATGGGCCGGCCCGTCGCTCCACGCCTCGGATCACCACTGTCTTCGCCCGCGG GGCGCACGCC CNG NGAGGCCCCTGCCCCCTCTCGGGCGGCGCGGCGGGGACCGGGGCTCACCGCGGTCATGCGCTGTTCTTGCTATCCCTCTCGTCAGTTTGTGCCCTCACCCTGATGATTTCCGTTTCACTAGCCTTGCACTTCTTGTCTTCTTCCACTCAACAGGTTGGCGCTAGGTTTTGCCGATTGGGGATGAACTCGTGACGAAATTGCAATGTGGGGCTCTCTCTCGGTAATGGATTGGAGAAGTGATGAACGGCGAGCTTAAACTTATGGCTTCCTATGTGAGCAAG TTAAGTTNATCTTGCAA ]
[+] EMBL AK100441 [ CATGCTTGGATGGGCCGGCCCGTCGCTCCACGCCTCGGATCACCACTGTCTTCGCCCGCGGCGGCGCACGCCGCCGCCGGAGCCCCTGCCCCCTCTCGGGCGGCGCGGCGGGGACCGGGGCTCACCGCGGCCATGCGCTGTTCTTGCTATCCCTCTCGTCAGTTTGTGCCCTCACCCTGATGATTTCCGTTTCACTAGCCTTGCACTTCTTGTCTTCTTCCACTCAACAGGTTGGCGCTAGGTTTTGCCGATTGGGGATGAACTCGTGACGAAATTGCAATGTGGGGCTCTCTCTCGGTAATGGATTGGAGAAGTGATGAACGGCGAGCTTAAACTTATGGCTTCCTATGTGAGCAAGCTTAAGTTCATCTTGCAAAAAGATCAGCAGCAGGAGCCCCATACTGCGAACCTTCTAGTCCTACTTGGGAGTAGCAATCAGGACAAAAGAAATGGCCTCTCACAGGGAGAAAACAGAATGGACACTTGTACCAGAAAGAAGCCAAGAAGATACCAACTCCTCACCATGCAACAAAAAGAAACGCTTAATCGTGCATTTCAATCATGTCCGAACCCTGATAGAAATGACTTGAAGAAGTTGGCCAAGGAACTAAACATGACTGAGACCAAAATCAAATATTGGTTCCAGAACTGCAGGACAAAGATGAAGAAATTCAAGAACAATGAGGAGCGCAAACTACTGCAGAAGGAGAATGAGGAGCTAAAGAAGGAGAATGCAGAGTTGAGAAATAGGATGAAGAACTCAACATGCCGCGCTTGTGACCTCCCTTTGTTCCATATAGATTGCCGTCATTGGGAGAATCCAATGCTCAACAAGGGTAATCATGGCGTTACAAGTAATCTCATTCCTCAGGCAGTGTCATCCTTGCTCCCCAGCTCAAGTGGTTTTGTAGCTTCAGGCTCCAATCTTAGTAGCAATGCTGTGCTCATGCCCGTATCTGCCATGCCATCATCAGTTTTGCAGCCTGCTCCAGCCGTCTCTGGTGCCAATTTTCCCATCTTGCACAATCTATCTGCCAATGCAAATGATGGCTATACGGAAAAAAACGTACTTCTTGATCTGGCGAACCGTGCAATGGAAGAGTTCTTTAGTCTAATGAAGGAGAATGAGTCTCTTCTTGTCAAAAAAAAGGAGAATGGGCCTCTCTGGCTCCCACACATGGATATTCTGGGAGTCGAATCACTTAACTACCAGGAATACCTTGCAAAATCCAGGACGATTGGACAAAAACCTGTTGACTTCAAAGTGGTCGTCACCAGGGACACTGCCATTGTCAATGGTAGCTGTGTTGACCTCGTCAAAAGCCTTTTGGATGCTAACCGCTGGAGAGAGTTGTTTCCAGGCATCGTGGCAAGTGCAAACACCACCAAGATCATCTCTACTGGGCCCTCTAACTTGCACGACGGGTTGCTTCAATTGATGCGTGCAGAGCTCCAGGTAATGTCACCTGAAGTCCCAGTTTGCGATGTGACATTCTTGAGGCAGAGTGTGCAGTTTGGAAGTGGACTGTGGTGTGTGGTTGATGTGTCTATTGATACCATCCTTCCTGGAGAGAGTAAAACAGCTCAGTCCAGTGTGCAGACCAGCAGTACAGCTGCCAGACGCATGGAAGTCAGGCTGTTGCCATCAGGCTGTGTTATTGAAGAAATGGAGAATGGCTATTCCAAGGTGACCTGGATGGTGCATGCAGCTTATGATGAGAGAGCAGTGCCAGTGCTTTATCATTCACTTCTCCGCTCTGCAAAAGCCCTTGGTGCGTGCCGCTGGGTAGCATCACTCCAGAGACACAGCCAGTTCCTTTCCGGCCTGCACAAATACATCTTTTGTCCTGACAGCACAATGACAGAAGTGGTGATGCGAAGAAAAGTCCTGTACCTGGTGAAGCAGATGACGAGCAGCTTCACAGGCCTATTTGCGTCGATGTCTAAGGCCACGCTGCAAGATGGTGATGATACTCACTTCGCGCATCAGATAGTTGGTGGTGCAACAGGTGAACCTGCCGGACTGCTGCTGAGCGCCACCACAACCATATGGCTCCCCGGCGTGAACCCGAGGCACGTGTATGACCACCTGCGTGATGAGCAGTGCCATGGTGAATGGCGCTGCCTCCTCGGTGAGCAGCTGCATCAGGGCAATGCCTTGCCGTATGGTGCCCCCCTGAATGGTGAGACCGTGCCAGAGTTCTATCGCATGGTGAACGGGCTGCATGAAGGGCATGCTATCTCCCTGATCAGCCCCAGAGAAATGGGTGGTAACATAAGCAACACTCTGCTCCTGCAAGAGGCAAGAACTGATCTTTCTGGCTCCCTCATAGTTTACGCCAGGACAGATGTGAACACCGTGCATTCCATCATGAACAGTGGCCTCAACCCTGCCACCGTCTTCCTCGTATCCTCTGGATGTGCCATTCTTCCTGATTGCCTGGAATCATTCCCTCTACACCCAGCTGCAACTGCAGATCAGGCCGGCACCTCCAGTGCCGCTATCGCTAGCAGGAGCGAAACCGGTGGGTCATTCGTCACCGTCACTTACCAGATGTTTTTCAGCAGCCAAGGTGGCGCAGCACCTGCCAGCTCATCAATTCATCAAGGCCGTGATGCGCTCAAGAAAGCCACCGACATTTTCAA GGTGGTCCTCGACACTCTCACCGTGGCATAGCGCAATACCCCAGGGGTAGCATTTGCATGCGAAAGTGAAATCCAGATCGAGTTAAATTTCAGTGTTTAAGACTATGT TGTTTCTGTTGTTCAGGGGAT GGCTTTATCTC TGATAGACCCGTGGATCATGCTGTTTACCTTGTTTACCATTTTCAGACTATCGATTTGAAATGTTGATCAGACATTTATAATAATTG]
[+] EMBL CB634575 [ CGCTCCACGCCTCGGATCACCACTGTCTTCGCCCGCGGCGGCGCACGCCGCCGCCGGAGCCCCTGCCCCCTCTCGGGCGGCGCGGTGGGGACCGGGGCTCACCGCGGCCATGCGCTGTTCTTGCTATCCCTCTCGTCAGTTTGTGCCCTCACCCTGATGATTTCCGTTTCACTAGCCTTGCACTTCTTGTCTTCTTCCACTCAACAGGTTGGCGCTAGGTTTTGCCGATTGGGGATGAACTCGTGACGAAATTGCATTGTGGGGCTCTCTCTCGGTAATGGATTGGAGAAGTGATGGACGGCGAGCTTAAACTTATGGCTTCCTATGTGAGCAAGCTTAAGTTCATCTTGCAAAAAGATCAGCAGCAGGAGCCCCATACTGCGAACCTTCTAGTCCTACTTGGGAGTAGCAATCAGGACAAAAGACATGGCCTCTCACAGGGAGAAAACAGAATGGACACTTGTACCAGAAAGAAGCCAAGAAGATACCAACTCCTCACCATGCAACAAAAAGAAACGCTTAATCGTGCATTTCAATCATGTCCGAACCCTGATAGAAATGACTTGAAGAAGTTGGCCAAGGAACTAAACATGACTGAGACCCAAATCAAATATTGGTTCCAGAACTGCAGGACAAAGATGAAGAAATTCAAGAACAATGAGGAGCGCAAACTACTGCAGAAGGAGAATGAGGAGCTGAAGAAGGAGAATGCAGAGTTGAGAAATAGGATGAA ]
[+] EMBL AK073784 [ CCTGCCCCCTCTCGGGCGGCGCGGCGGGGACCGGGGCTCACCGCGGCCATGCGCTGTTCTTGCTATCCCTCTCGTCAGTTTGTGCCCTCACCCTGATGATTTCCGTTTCACTAGCCTTGCACTTCTTGTCTTCTTCCACTCAACAGGTTGGCGCTAGGTTTTGCCGATTGGGGATGAACTCGTGACGAAATTGCAATGTGGGGCTCTCTCTCGGTAATGGATTGGAGAAGTGATGAACGGCGAGCTTAAACTTATGGCTTCCTATGTGAGCAAGCTTAAGTTCATCTTGCAAAAAGATCAGCAGCAGGAGCCCCATACTGCGAACCTTCTAGTCCTACTTGGGAGTAGCAATCAGGACAAAAGAAATGGCCTCTCACAGGGAGAAAACAGAATGGACACTTGTACCAGAAAGAAGCCAAGAAGATACCAACTCCTCACCATGCAACAAAAAGAAACGCTTAATCGTGCATTTCAATCATGTCCGAACCCTGATAGAAATGACTTGAAGAAGTTGGCCAAGGAACTAAACATGACTGAGACCCAAATCAAATATTGGTTCCAGAACTGCAGGACAAAGATGAAGAAATTCAAGAACAATGAGGAGCGCAAACTACTGCAGAAGGAGAATGAGGAGCTAAAGAAGGAGAATGCAGAGTTGAGAAATAGGATGAAGAACTCAACATGCCGCGCTTGTGACCTCCCTTTGTTCCATATAGATTGCCGTCATTGGGAGAATCCAATGCTCAACAAGGGTAATCATGGCGTTACAAGTAATCTCATTCCTCAGGCAGTGTCATCCTTGCTCCCCAGCTCAAGTGGTTTTGTAGCTTCAGGCTCCAATCTTAGTAGCAATGCTGTGCTCATGCCCGTATCTGCCATGCCATCATCAGTTTTGCAGCCTGCTCCAGCCGTCTCTGGTGCCAATTTTCCCATCTTGCACAATCTATCTGCCAATGCAAATGATGGCTATACGGAAAAAAACGTACTTCTTGATCTGGCGAACCGTGCAATGGAAGAGTTCTTTAGTCTAATGAAGGAGAATGAGTCTCTTCTTGTCAAAAAAAAGGAGAATGGGCCTCTCTGGCTCCCACACATGGATATTCTGGGAGTCGAATCACTTAACTACCAGGAATACCTTGCAAAATCCAGGACGATTGGACAAAAACCTGTTGACTTCAAAGTGGTCGTCACCAGGGACACTGCCATTGTCAATGGTAGCTGTGTTGACCTCGTCAAAAGCCTTTTGGATGCTAACCGCTGGAGAGAGTTGTTTCCAGGCATCGTGGCAAGTGCAAACACCACCAAGATCATCTCTACTGGGCCCTCTAACTTGCACGACGGGTTGCTTCAATTGATGCGTGCAGAGCTCCAGGTAATGTCACCTGAAGTCCCAGTTTGCGATGTGACATTCTTGAGGCAGAGTGTGCAGTTTGGAAGTGGACTGTGGTGTGTGGTTGATGTGTCTATTGATACCATCCTTCCTGGAGAGAGTAAAACAGCTCAGTCCAGTGTGCAGACCAGCAGTACAGCTGCCAGACGCATGGAAGTCAGGCTGTTGCCATCGGGCTGTGTTATTGAAGAAATGGAGAATGGCTATTCCAAGGTGACCTGGATGGTGCATGCAGCTTATGATGAGAGAGCAGTGCCAGTGCTTTATCATTCACTTCTCCGCTCTGCAAAAGCCCTTGGTGCGTGCCGCTGGGTAGCATCACTCCAGAGACACAGCCAGTTCCTTTCCGGCCTGCACAAATACATCTTTTGTCCTGACAGCACAA AAGTGGTGATGCGAAGAAAAGTCCTGTACCTGGTGAAGCAGATGACGAGCAGCTTCACAGGCCTATTTGCGTCGATGTCTAAGGCCACGCTGCAAGATGGTGATGATACTCACTTCGCGCATCAGATAGTTGGTGGTGCAACAGGTGAACCTGCCGGACTGCTGCTGAGCGCCACCACAACCATATGGCTCCCCGGCGTGAACCCGAGGCACGTGTATGACCACCTGCGTGATGAGCAGTGCCATGGTGAATGGCGCTGCCTCCTCGGTGAGCAGCTGCATCAGGGCAATGCCTTGCCGTATGGTGCCCCCCTGAATGGTGAGACCGTGCCAGAGTTCTATCGCATGGTGAACGGGCTGCATGAAGGGCATGCTATCTCCCTGATCAGCCCCAGAGAAATGGGTGGTAACATAAGCAACACTCTGCTCCTGCAAGAGGCAAGAACTGATCTTTCTGGCTCCCTCATAGTTTACGCCAGGACAGATGTGAACACCGTGCATTCCATCATGAACAGTGGCCTCAACCCTGCCACCGTCTTCCTCGTATCCTCTGGATGTGCCATTCTTCCTGATTGCCTGGAATCATTCCCTCTACACCCAG ]
[+] EMBL CB677066 [ TTGTACCAGAAAGAAGCCAAGAAGATACCAACTCCTCACCATGCAACAAAAAGAAACGCTTAATCGTGCATTTCAATCATGTCCGAACCCTGATAGAAATGACTTGAAGAAGTTGGCCAAGGAACTAAACATGACTGAGACCCAAATCAAATATTGGTTCCAGAACTGCAGGACAAAGATGAAGAAATTCAAGAACAATGAGGAGCGCAAACTACTGCAGAAGGAGAATGAGGAGCTAAAGAAGGAGAATGCAGAGTTGAGAAATAGGATGAAGAACTCAACATGCCGCGCTTGTGACCTCCCTTTGTTCCATATAGATTGCCGTCATTGGGAGAATCCAATGCTCAACAAGGGTAATCATGGCGTTACAAGTAATCTCATTCCTCAGGCAGTGTCATCCTTGCTCCCCAGCTCAAGTGGTTTTGTAGCTTCAGGCTCCAATCTTAGTAGCAATGCTGTGCTCATGCCCGTATCTGCCATGCCATCATCAGTTTTGCAGCCTGCTCCAGCCGTCTCTGGTGCCAATTTTCCCATCTTGCACAATCTATCTGCCAATGCAAATGATGGCTATACGGAAAAAAACGTACTTCTTGATCTGGCGAACCGTGCAATGGAAGAGTTCTTTAGTCTAATGAAGGAGAATGAGTCTCTTCTTGTCAAAAAAAAGGAGAATGGGCCTCTCTGGCTCCCACACATGGATATTCTGGGAGTCGAATCACTTAACTACCAGGAATACCTTGCAAAATCCAGGACGATTGGACAAAAACCTGTTGACTTCAAAGTGGTCGTCACCAGGGAC ]
[+] EMBL CA758141 [ CACGCTGCAAGATGGTGATGATACTCACTTCGCGCATCAGATAGTTGGTGGTGCAACAGGTGAACCTGCCGGACTGCTGCTGAGCGCCACCACAACCATATGGCTCCCTGGCGTGAACCCGAGGCGCGTGTATGACCACCTGCGTGATGAGCAGTGCCATGGTGAATGGCGCTGCCTCCTCGGTGAGCAGCTGCATCAGGGCAATGCCTTGCCGTATGGTGCCCCCCTGAATGGTGAGACCGTGCCAGAGTTCTATCGCATGGTGAACGGGCTGCATGAAGGGCATGCTATCTCCCTGATCAGCCCAAGAGAAATGGGTGGTAACATAAGCAACACTCTGCTCCTGCAAGAGGCAAGAACTGATCTTTCTGGCTCCCTCATAGTTTACGCCAGGACAGATGTGAACACCGTGCATTCCATCATGAACAGTGGCCTCAACCCTGCCACCGTCTTCCTCGTATCCTCTGGATGTGCCATTCTTCCTGATTGCCTGGAATCATTCCCTCTACACCCAGCTGCAACTGCAGATCAGGCCGGCACCTCCAGTGCCGCTATCGCTAGCAGGAGCGAAACCGGTGGGTCATTCGTCACCGTCACTTACCAGATGTTTTTCAGCAGCCAAGGTGGCGCAGCACCTGCCAGCTCATCAATTCATCAAGGCCGTGATGCGCTCAAGAAAGCCACCGACATTTTCAAGGGTGGTCCTCGACACTATCACCGTGGCATAGCGCAATACCCCAGGGGTAGCATTTGCATGCGAAAATGAAATCCAGATCGAGTAAAATTTCAGGGTTTAAGACTATGTGGGTTTCTGTTGTTCAGGGGATAGCCTTTATCTCTTGA AAACCCGTGGAacca ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||