These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8832#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2557 fasta sequence [TCCTCTGCCTGCCGCCCCCAATCGCCGGCGATGCCGCGCCCCGCCGCCTCCTCCTCCAGCCGCCCTCCGCCGGAAGGCGAGCCGGCCTCGAGCCGCGCGACCTCCTCTGCGGAGTCCTCCATCGCGTCCCTCATCGACCGCGCCACCTCCACCACCTCCCCCTCCGTCGACCCGGCCCTCCTCCGCGCCATCAAGTCCGCCGCCCGCGCCTCCGACGGCGCCATCCGCGACGCCTTCCGGATCCTCCTCTCCCTCATGTCCAAGCCCCACGCCCACGTGAGTAAGCTCCTCCCTGCTGGTTTGATTCCCTTGACGAATTCGCCCAAACCCTAACTCGCCCAATCTTCAGGTGCGGCTGCTCGCGTTCATCATCGCCGACGAGCTCTTCATGCGCTCGAAGCTCTTCCGCTCCCTGCTGACCGACGTGCTGGACGGCTTCCTCCCGCTCGCCGTCGGCTTCCGCCGCGCCCACCCGCTCCCGCCGCCCGCTGCCTCCGCGACCCTGCTCCGCAAGGCCGCCGTCCAGGCGCTCGAGCGCTGGCACCACCTGTTCGGCGCGCACTACCGCCAGCTCCGCCTCGCCGTCGAGTACCTCAAGGAGTCCGCCCGGGTCCAGTTCCCCGGCCTCCGTGCCGCCGTCGAGGCTCGTGCCGCGCGGGAGGCTCGCACGCAGGAGATCTTAACTGCAAAGGTCGAGCAGTTGCGCCGAAACCTGGCAGCGATTAAGGCTGAAATCCGCTCCGCGATTGATGAGATCCGCAATGGGTTGGATATCATTCGCATCGAGAGTGAAAAATTTAACAATTATGCAAATGATGAGGATGAGGAGCAGGAGATTGCCTCTTTGGCGATGCGGAGTATTAGGATGGCTTCTTTGATGGCTGGGGAGTGGGTTCCTGAGACTCAGGAGAATGAAGCAGTTTTCGACGCGTTGAGGGAGTCATATCGGCTCCTTGTGTCAAAGCATTTGGTCACAGTTCAGGAATGGATATCTGTGCTGGTTAGGGTCAATCTCGCAGATAATCGTTTCAGAGATTCTGCTTTGAAGGAATTCATTGATGTTAAGAATGAAATACGAGCGGTGAGAAATCGGTGTAGTGAGCTTGGTCTTAATCTTGACAATGTCCATAGGCGGAAGGGTGTTCAGGAGGAAGAGGATGATGACTTTTGGGTTGAGGGGAATATTGAGGTTCCTAGCCCTGGTAGAGTAGGTACCAGTGCAGATGTTGCAAGTAGCAGCAAGGACACTAGAAAGGGAAAGAAGCCAGTAGGTGGCACGGATACTGATGATGGCAAGGCACCTAATGCTGGCAATAGTCCTCAAGAGCTGGATCCAGAGAGGGCAAAGCTGCATGCAGAAGCCCCTGTGCTGCCATGGAGCTCTGTTTTGGATCGTTGGGGTTCTAACAGGGATGCACTTGTAAACCAAAGGGGACTTGAGCTCGAGAGCCATTGGGGAAGGGTGGATAATGATGCTGTTATACCTGCTGCAAAGATTGCAGAATTAAATGTTCATAGTTCAATATATAGAGAAGATCCAGTTGAGATTCTACCATGCCTTGCACCTCTGAAGAAAGGAGGCCTTTGCCAGAGAAGAGATCTCAAGATATGCCCGTTTCATGGGCCTATTGTTCCACGAGATGCCGAAGGAAATCCAATTCATCAGAGTGATGGCCATTGTGATGCAGAAGGAAATCCAGTTGGGCAGACTGATGGCCATTATGATGCAGCAGTAAGTCCTATTGATCCGAATGAAGACAGTTCTGATGTAAGAGAAAATATGATTATGCCAGATGGAAGCAGTGATGGTGAATGTATTTATGAGTCCTCTCCTTCAAGAACGGCAAACATAAATAATGACATTAGCGACAGCGATGTAGGTCATGACCTCGGTAAAATTACAGTGGAGCAGTTGGCGAGACAGGCAGTGCAGAATGTCCGGAAAAGAGACAGGGATGACAAAAAAGCTCTGGAAAAAGCCCAACGAGCGAGAATTCGTCAGCATAATCAAGATGTTTTGCGGGAAGCGGCTCTTGCTTCAACCTCGCGCTCAGCGGCAGACTATGACCTCCCTTCGCCAGCAGTGTCTCGACGGGGACGCCGAGGTAAGACAAAGGGACCAACACTGGCATCGATGCTGAAGAAGAAAGTTACTTCCAAAGATAGAATTGCAGAGAGGCTTCTGAATGCTCGAGCTAGGGATGCGACAATAAGAGAAGTTTCACATACTGAAGATATGAGCTACAGAGAAGCATTCCCAAATCAATGGTAGTATAAGAAGCCTAATTTTTGCTGAATAGGTTGGTGAATCGTCATGATAAGAGTGAATCAATAATTCTTTCTGTGCGCAGTTTTCAGTTAACCACATGTCTTCTTGAGTTGCCCAGATACAAGTAAAATTGTAGGTTTTCATTGTGAAGTTTAGTTTTTGTACAGTACAGTAGATTGAATAAGTTTCTTTTATTTCTTTTGCATGTTCATTTTCCCTTTGTAAACATGTATATGTACCACTCCATACTTGCTGGATTAATAACTATATACGCTGAGGCTGCAGTTC] [+] EMBL AK103308 [TCCTCTGCCTGCCGCCCCCAATCGCCGGCGATGCCGCGCCCCGCCGCCTCCTCCTCCAGCCGCCCTCCGCCGGAAGGCGAGCCGGCCTCGAGCCGCGCGACCTCCTCTGCGGAGTCCTCCATCGCGTCCCTCATCGACCGCGCCACCTCCACCACCTCCCCCTCCGTCGACCCGGCCCTCCTCCGCGCCATCAAGTCCGCCGCCCGCGCCTCCGACGGCGCCATCCGCGACGCCTTCCGGATCCTCCTCTCCCTCATGTCCAAGCCCCACGCCCACGTGAGTAAGCTCCTCCCTGCTGGTTTGATTCCCTTGACGAATTCGCCCAAACCCTAACTCGCCCAATCTTCAGGTGCGGCTGCTCGCGTTCATCATCGCCGACGAGCTCTTCATGCGCTCGAAGCTCTTCCGCTCCCTGCTGACCGACGTGCTGGACGGCTTCCTCCCGCTCGCCGTCGGCTTCCGCCGCGCCCACCCGCTCCCGCCGCCCGCTGCCTCCGCGACCCTGCTCCGCAAGGCCGCCGTCCAGGCGCTCGAGCGCTGGCACCACCTGTTCGGCGCGCACTACCGCCAGCTCCGCCTCGCCGTCGAGTACCTCAAGGAGTCCGCCCGGGTCCAGTTCCCCGGCCTCCGTGCCGCCGTCGAGGCTCGTGCCGCGCGGGAGGCTCGCACGCAGGAGATCTTAACTGCAAAGGTCGAGCAGTTGCGCCGAAACCTGGCAGCGATTAAGGCTGAAATCCGCTCCGCGATTGATGAGATCCGCAATGGGTTGGATATCATTCGCATCGAGAGTGAAAAATTTAACAATTATGCAAATGATGAGGATGAGGAGCAGGAGATTGCCTCTTTGGCGATGCGGAGTATTAGGATGGCTTCTTTGATGGCTGGGGAGTGGGTTCCTGAGACTCAGGAGAATGAAGCAGTTTTCGACGCGTTGAGGGAGTCATATCGGCTCCTTGTGTCAAAGCATTTGGTCACAGTTCAGGAATGGATATCTGTGCTGGTTAGGGTCAATCTCGCAGATAATCGTTTCAGAGATTCTGCTTTGAAGGAATTCATTGATGTTAAGAATGAAATACGAGCGGTGAGAAATCGGTGTAGTGAGCTTGGTCTTAATCTTGACAATGTCCATAGGCGGAAGGGTGTTCAGGAGGAAGAGGATGATGACTTTTGGGTTGAGGGGAATATTGAGGTTCCTAGCCCTGGTAGAGTAGGTACCAGTGCAGATGTTGCAAGTAGCAGCAAGGACACTAGAAAGGGAAAGAAGCCAGTAGGTGGCACGGATACTGATGATGGCAAGGCACCTAATGCTGGCAATAGTCCTCAAGAGCTGGATCCAGAGAGGGCAAAGCTGCATGCAGAAGCCCCTGTGCTGCCATGGAGCTCTGTTTTGGATCGTTGGGGTTCTAACAGGGATGCACTTGTAAACCAAAGGGGACTTGAGCTCGAGAGCCATTGGGGAAGGGTGGATAATGATGCTGTTATACCTGCTGCAAAGATTGCAGAATTAAATGTTCATAGTTCAATATATAGAGAAGATCCAGTTGAGATTCTACCATGCCTTGCACCTCTGAAGAAAGGAGGCCTTTGCCAGAGAAGAGATCTCAAGATATGCCCGTTTCATGGGCCTATTGTTCCACGAGATGCCGAAGGAAATCCAATTCATCAGAGTGATGGCCATTGTGATGCAGAAGGAAATCCAGTTGGGCAGACTGATGGCCATTATGATGCAGCAGTAAGTCCTATTGATCCGAATGAAGACAGTTCTGATGTAAGAGAAAATATGATTATGCCAGATGGAAGCAGTGATGGTGAATGTATTTATGAGTCCTCTCCTTCAAGAACGGCAAACATAAATAATGACATTAGCGACAGCGATGTAGGTCATGACCTCGGTAAAATTACAGTGGAGCAGTTGGCGAGACAGGCAGTGCAGAATGTCCGGAAAAGAGACAGGGATGACAAAAAAGCTCTGGAAAAAGCCCAACGAGCGAGAATTCGTCAGCATAATCAAGATGTTTTGCGGGAAGCGGCTCTTGCTTCAACCTCGCGCTCAGCGGCAGACTATGACCTCCCTTCGCCAGCAGTGTCTCGACGGGGACGCCGAGGTAAGACAAAGGGACCAACACTGGCATCGATGCTGAAGAAGAAAGTTACTTCCAAAGATAGAATTGCAGAGAGGCTTCTGAATGCTCGAGCTAGGGATGCGACAATAAGAGAAGTTTCACATACTGAAGATATGAGCTACAGAGAAGCATTCCCAAATCAATGGTAGTATAAGAAGCCTAATTTTTGCTGAATAGGTTGGTGAATCGTCATGATAAGAGTGAATCAATAATTCTTTCTGTGCGCAGTTTTCAGTTAACCACATGTCTTCTTGAGTTGCCCAGATACAAGTAAAATTGTAGGTTTTCATTGTGAAGTTTAGTTTTTGTACAGTACAGTAGATTGAATAAGTTTCTTTTATTTCTTTTGCATGTTCATTTTCCCTTTGTAAACATGTATATGTACCACTCCATACTTGCTGGATTAATAACTATATACGCTGAGG ] [+] EMBL AK058474 [ GAGGATGAGGAGCAGGAGATTGCCTCTTTGGCGATGCGGAGTATTAGGATGGCTTCTTTGATGGCTGGGGAGTGGGTTCCTGAGACTCAGGAGAATGAAGCAGTTTTCGACGCGTTGAGGGAGTCATATCGGCTCCTTGTGTCAAAGCATTTGGTCACAGTTCAGGAATGGATATCTGTGCTGGTTAGGGTCAATCTCGCAGATAATCGTTTCAGAGATTCTGCTTTGAAGGAATTCATTGATGTTAAGAATGAAATACGAGCGGTGAGAAATCGGTGTAGTGAGCTTGGTCTTAATCTTGACAATGTCCATAGGCGGAAGGGTGTTCAGGAGGAAGAGGATGATGACTTTTGGGTTGAGGGGAATATTGAGGTTCCTAGCCCTGGTAGAGTAGGTACCAGTGCAGATGTTGCAAGTAGCAGCAAGGACACTAGAAAGGGAAAGAAGCCAGTAGGTGGCACGGATACTGATGATGGCAAGGCACCTAATGCTGGCAATAGTCCTCAAGAGCTGGATCCAGAGAGGGCAAAGCTGCATGCAGAAGCCCCTGTGCTGCCATGGAGCTCTGTTTTGGATCGTTGGGGTTCTAACAGGGATGCACTTGTAAACCAAAGGGGACTTGAGCTCGAGAGCCATTGGGGAAGGGTGGATAATGATGCTGTTATACCTGCTGCAAAGATTGCAGAATTAAATGTTCATAGTTCAATATATAGAGAAGATCCAGTTGAGATTCTACCATGCCTTGCACCTCTGAAGAAAGGAGGCCTTTGCCAGAGAAGAGATCTCAAGATATGCCCGTTTCATGGGCCTATTGTTCCACGAGATGCCGAAGGAAATCCAATTCATCAGAGTGATGGCCATTGTGATGCAGAAGGAAATCCAGTTGGGCAGACTGATGGCCATTATGATGCAGCAGTAAGTCCTATTGATCCGAATGAAGACAGTTCTGATGTAAGAGAAAATATGATTATGCCAGATGGAAGCAGTGATGGTGAATGTATTTATGAGTCCTCTCCTTCAAGAACGGCAAACATAAATAATGACATTAGCGACAGCGATGTAGGTCATGACCTCGGTAAAATTACAGTGGAGCAGTTGGCGAGACAGGCAGTGCAGAATGTCCGGAAAAGAGACAGGGATGACAAAAAAGCTCTGGAAAAAGCCCAACGAGCGAGAATTCGTCAGCATAATCAAGATGTTTTGCGGGAAGCGGCTCTTGCTTCAACCTCGCGCTCAGCGGCAGACTATGACCTCCCTTCGCCAGCAGTGTCTCGACGGGGACGCCGAGGTAAGACAAAGGGACCAACACTGGCATCGATGCTGAAGAAGAAAGTTACTTCCAAAGATAGAATTGCAGAGAGGCTTCTGAATGCTCGAGCTAGGGATGCGACAATAAGAGAAGTTTCACATACTGAAGATATGAGCTACAGAGAAGCATTCCCAAATCAATGGTAGTATAAGAAGCCTAATTTTTGCTGAATAGGTTGGTGAATCGTCATGATAAGAGTGAATCAATAATTCTTTCTGTGCGCAGTTTTCAGTTAACCACATGTCTTCTTGAGTTGCCCAGATACAAGTAAAATTGTAGGTTTTCATTGTGAAGTTTAGTTTTTGTACAGTACAGTAGATTGAATAAGTTTCTTTTATTTCTTTTGCATGTTCATTTTCCCTTTGTAAACATGTATATGTACCACTCCATACTTGCTGGATTAATAACTATATACGCTGAGGCTGCAGTTC] [+] EMBL CB627717 [ GGGACGGTTGGATAATGATGCTGTCATACCTGCTGCAAAGATTGCACAATTAAATGTTCATAGTTCAATATATAGAGAAGATCCAGTTGAGATTCTACCATGCCTTGCACCTCTGAAGAAAGGAGGCCTTTGCCAGAGAAGAGATCTCAAGATATGCCCGTTTCATGGGCCTATTGTTCCACGAGATGCCGAAGGAAATCCAATTTATCAGAGTGATGGCCATTGTGATGCAGAAGGAAATCCAGTTGGGCAGACTGATGGCCGTTATGATGCAGCAGTAAGTCCTATTGATCCGAATGAAGACAGTTCTGATTTAAGAGAAAATATGATTATGCCAGATGGAAGCAGTGATGGTGAATGTATTTATGAGTCCTCTCCTTCAAGAACGGCAAACATAAATAATGACATTAGCGACAGTGATGTAGGTCATGACCTCGGTAAAATTACAGTGGAGCAGTTGGCGAGACAGGCAGTGCAGAATGTCCGGAAAAGGGACAGGGATGACAAAAAAGCTCTGGAAAAAGCCCAACGAGTGAGAATTCGTCAGCATAATCAAGATGTTTTGCGGGAAGCGGCTCTTGCTTCAACCTCGCGCTCAGCGGCAGACTATGACCTCCCTTCGCCAGCAGTGTCTCGACGGGGACGCCGAGGTAAGACAAAGGGACCAACACTGGCATCGATGCTGAAGAAGAAAGTTACTTCCAAAGATAGAATTGCAGAGAGGCTTCTGAATGCTCGAGCTAGGGATGCGACAATAAGAGAAGTTTCACATACTGAAGATATGAGCTACAGAGAAGCA ] [-] EMBL CB627716 [ TAAGTCNTATTGATCCGAATGAAGACAGTTCTGATTTAAGAGAAAATATGATTATGCCAGATGGAAGCAGTGATGGTGAATGTATTTATGAGTCCTCTCCTTCAAGAACGGCAAACATAAATAATGACATTAGCGACAGTGATGTAGGTCATGACCTCGGTAAAATTACAGTGGAGCAGTTGGCGAGACAGGCAGTGCAGAATGTCCGGAAAAGGGACAGGGATGACAAAAAAGCTCTGGAAAAAGCCCAACGAGTGAGAATTCGTCAGCATAATCAAGATGTTTTGCGGGAAGCGGCTCTTGCTTCAACCTCGCGCTCAGCGGCAGACTATGACCTCCCTTCGCCAGCAGTGTCTCGACGGGGACGCCGAGGTAAGACAAAGGGACCAACACTGGCATCGATGCTGAAGAAGAAAGTTACTTCCAAAGATAGAATTGCAGAGAGGCTTCTGAATGCTCGAGCTAGGGATGCGACAATAAGAGAAGTTTCACATACTGAAGATATGAGCTACAGAGAAGCATTCCCAAATCAATGGTAGTATAAGAAGCCTAATTTTTGCTGAATAGGTTGGTGAATCGTCATGATAAGAGTGAATCAATAATTCTTTCTATGCGCAGTTTTCAGTTAACCACATGTCTTCTTGAGTTGCCCAGATACAAGTAAAATTGTAGGTTTTCGTTGTGAAGTTTAGTTTTTGTACAGTACAGTAGATTGAATAAGTTTCTTTTATTTCTTTTGCATGTTCATTTTCCCTTTGTAAACATGTATATGTACCACTCCATACTTGCTGGATTAATAACTATATACGCTGAGGCT ] [+] EMBL CB682914 [ gcagccttGAATGTCCGGAAAAGAGACAGGGATGACAAAAAAGCTCTGGAAAAAGCCCAACGAGCGAGAATTCGTCAGCATAATCAAGATGTTTTGCGGGAAGCGGCTCTTGCTTCAACCTCGCGCTCAGCGGCAGACTATGACCTCCCTTCGCCAGCAGTGTCTCGACGGGGACGCCGAGGTAAGACAAAGGGACCAACACTGGCATCGATGCTGAAGAAGAAAGTTACTTCCAAAGATAGAATTGCAGAGAGGCTTCTGAATGCTCGAGCTAGGGATGCGACAATAAGAGAAGTTTCACATACTGAAGATATGAGCTACAGAGAAGCATTCCCAAATCAATGGTAGTATAAGAAGCCTAATTTTTGCTGAATAGGTTGGTGAATCGTCATGATAAGAGTGAATCAATAATTCTTTCTGTGCGCAGTTTTCAGTTAACCACATGTCTTCTTGAGTTGCCCAGATACAAGTAAAATTGTAGGTTTTCATTGTGAAGTTTAGTTTTTGTACAGTACAGTAGATTGAATAAGTTTCTTTTATTTCTTTTGCATGTTCATTTTCCCTTTGTAAACATGTATATGTACCACTCCATACTTGCTGGATTAATAACTATATACGCTGAGGCTGCAGTTC] [+] EMBL CA753186 [ AGAATTCGTCAGCATAATCAAGATGTTTTGCGGGAAGCGGCTCTTGCTTCAACCTCGCGCTCAGCGGCAGACTATGACCTCCCTTCGCCAGCAGTGTCTCGACGGGGACGCCGAGGTAAGACAAAGGGACCAACACTGGCATCGATGCTGAAGAAGAAAGTTACTTCCAAAGATAGAATTGCAGAGAGGCTTCTGAATGCTCGAGCTAGGGATGCGACAATAAGAGAAGTTTCACATACTGAAGATATGAGCTACAGAGAAGCATTCCCAAATCAATGGTAGTATAAGAAGCCTAATTTTTGCTGAATAGGTTGGTGAATCGTCATGATAAGAGTGAATCAATAATTCTTTCTATGCGCAGTTTTCAGTTAACCACATGTCTTCTTGAGTTGCCCAGATACAAGTAAAATTGTAGGTTTTCGTTGTGAAGTTTAGTTTTTGTACAGTACAGTAGATTGAATAAGTTTCTTTTATTTCTTTTGCATGTTCATTTTCCCTTTGT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||