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Oryza sativa
cluster # 8834 cluster # 8834       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8834#0 length = 1453 sequences # 4  
consensus_8834#1 length = 776 sequences # 1  
consensus_8834#2 length = 566 sequences # 1  

consensusID : consensus_8834#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1453
fasta sequence
                              [GCCTCGATCGCGGCGGTGGCGGTGGGGAGGGGAGCGCACCGCCTGCCCAGCCATGAGATGGTATGCTTCGCTAGCCTGAGGAGGGCTCTGCCTCTGCTGCTGCGCGCCACCACCACCACCACCCCCCGCTTCCTTCTCCCCAGGGCCCTCTCCGGCGGCGTTGGCGGCGGGGCGGCGGTGGATGCGCGCGCGCTTCTCCGTGGGCACAGCGGGTGGCGCGGGCTCCGGGTGGCCGCCAGGATGATGCTCGACTCCTCCGACTCCGCCGCCGCTGCGGGGCAGATGCAGCCGCAGCAGCGTGCGGCGGGGGCCGTCGCCTGCAGCGCGCAGGACGGTGGTGCCGCAGGGTACGCCAGCGGCGGGTGGGCGAGAGAAGATGGTAAACTGAAATGTGGATATTCAAGTTTTAGAGGGAAGAGAGCCACCATGGAGGATTTCTATGATGTAAAGTTAACTGAAATCGATGGACAGGCTGTTAGCCTATTTGGTGTATTTGATGGTCATGGAGGACCACGTGCTGCTGAGTATTTGAAGGAAAATTTGTTCGAAAATCTTCTGAAACACCCTGAGTTCCTGACAGATACAAAGCTTGCCATAAGTGAAACATATCAGAAAACAGATACAGATTTCTTAGAATCAGAATCCAATGCCTTCAGGGATGATGGTTCAACAGCTTCCACTGCAGTTTTGGTGGGTGGCCATCTATATGTAGCAAATGTTGGTGATT-CCCGTGCTGTTGTTTCAAAAGCTGGTAAAGCTATGGCACTGTCAGAAGATCACAAACCTAACAGGAGTGATGAGCGGAAGAGAATTGAAAATGCAGGAGGAGTTGTCATTTGGGCTGGTACTTGGAGGGTAGGAGGTGTACTGGCAATGTCGCGTGCATTTGGCAATCGTCTACTGAAGCCATTTGTGGTGGCAGAGCCTGAAATTCAGGAAGAACTTGTCAATGAAGACTTGGAATGCCTCGTTCTTGCTAGCGATGGACTTTGGGATGTCGTGGAAAATGAGGAAGCTGTTTCCCTTGCGAAAACAGAAGACCTGCCTGAGTCGGTGGCTAGGAAACTCACGGAAATAGCCTATTCTCGAGGCAGCGCTGACAACATTACATGCATCGTGGTGCAATTTCACCATGATAAAACTGAATAATAAGATGGGACTAGAGCTGATGAAAGGTTGAAGGTTTTTCTACTTCAAGCTACTTTCCAGCAGTCCAACCACAGAGGGGGTTCCCCAGGAGATGTTGCTCCTGTAGCATTTGCTAAGGATTGTTTCGTTGATTCTTTTCCTTGTGTAGGAATCATTTTTTGTTTTCAGAGGTGTTACGAACAGAAAATTTTATTTCGAGTGTAACACACAGTTTTAATTGGATGGATACTAATAAATCAATTGCTTGTTTACCTAATTACCTGCCATTACGGGCATGGCATATAATTCTCGATGATATATAGTT]

[+] EMBL AK069289             [GCCTCGATCGCGGCGGTGGCGGTGGGGAGGGGAGCGCACCGCCTGCCCAGCCATGAGATGGTATGCTTCGCTAGCCTGAGGAGGGCTCTGCCTCTGCTGCTGCGCGCCACCACCACCACCACCCCCCGCTTCCTTCTCCCCAGGGCCCTCTCCGGCGGCGTTGGCGGCGGGGCGGCGGTGGATGCGCGCGCGCTTCTCCGTGGGCACAGCGGGTGGCGCGGGCTCCGGGTGGCCGCCAGGATGATGCTCGACTCCTCCGACTCCGCCGCCGCTGCGGGGCAGATGCAGCCGCAGCAGCGTGCGGCGGGGGCCGTCGCCTGCAGCGCGCAGGACGGTGGTGCCGCAGGGTACGCCAGCGGCGGGTGGGCGAGAGAAGATGGTAAACTGAAATGTGGATATTCAAGTTTTAGAGGGAAGAGAGCCACCATGGAGGATTTCTATGATGTAAAGTTAACTGAAATCGATGGACAGGCTGTTAGCCTATTTGGTGTATTTGATGGTCATGGAGGACCACGTGCTGCTGAGTATTTGAAGGAAAATTTGTTCGAAAATCTTCTGAAACACCCTGAGTTCCTGACAGATACAAAGCTTGCCATAAGTGAAACATATCAGAAAACAGATACAGATTTCTTAGAATCAGAATCCAATGCCTTCAGGGATGATGGTTCAACAGCTTCCACTGCAGTTTTGGTGGGTGGCCATCTATATGTAGCAAATGTTGGTGATT CCCGTGCTGTTGTTTCAAAAGCTGGTAAAGCTATGGCACTGTCAGAAGATCACAAACCTAACAGGAGTGATGAGCGGAAGAGAATTGAAAATGCAGGAGGAGTTGTCATTTAGGCTGGTACTTGGAGGGTAGGAGGTGTACTGGCAATGTCGCGTGCATTTGGCAATCGTCTACTGAAGCCATTTGTGGTGGCAGAGCCTGAAATTCAGGAAGAACTTGTCAATGAAGACTTGGAATGCCTCGTTCTTGCTAGCGATGGACTTTGGGATGTCGTGGAAAATGAGGAAGCTGTTTCCCTTGCGAAAACAGAAGACCTGCCTGAGTCGGTGGCTAGGAAACTCACGGAAATAGCCTATTCTCGAGGCAGCGCTGACAACATTACATGCATCGTGGTGCAATTTCACCATGATAAAACTGAATAATAAGATGGGACTAGAGCTGATGAAAGGTTGAAGGTTTTTCTACTTCAAGCTACTTTCCAGCAGTCCAACCACAGAGGGGGTTCCCCAGGAGATGTTGCTCCTGTAGCATTTGCTAAGGATTGTTTCGTTGATTCTTTTCCTTGTGTAGGAATCATTTTTTGTTTTCAGAGGTGTTACGAACAGAAAATTTTATTTCGAGTGTAACACACAGTTTTAATTGGATGGATACTAATAAATCAATTGCTTGTTTACCTAATTACCTGCCATTACGGGCATGGCATATAATTCTCGATGATATATAGTT]
[+] EMBL OSS13409A            [                                                                                                                                                                                                                                                                                                                                                                                                                    TTTTAGAGGGAAGAGAGCCACCATGGAGGATTTCTATGATGTAAAGTTAACTGAAATCGATGGACAGGCTGTTAGCCTATTTGGTGTATTTNATGGTCATGGAGGACCACGTGCTGCTGAGTATTTGAAGGAAAATTTGTTCGAAAATCTTCTGAAACACCCTGAGTTCCTGACAGATACAAAGCTTGCCATAAGTG AACATATCAGAAAACAGATACAGATTTCTTAGAATCAGAATCCAATGCCTTCAGGGATGATGGTTCAACAGCTTCCACTGCAGTTTTGGTGGGTGGCCATCTATATGTAGCAAATGTTGGTGATTNCCCGTGCTGTNGTTTCAAAAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB644164             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCAATGCCTTCAGGGATGATGGTTCAACAGCTTCCACTGCAGTTTTGGTGGGTGGCCATCTATATGTAGCAAATGTTGGTGATT CCCGTGCTGTTGTTTCAAAAGCTGGTAAAGCTATGGCACTGTCAGAAGATCACAAACCTAACAGGAGTGATGAGCGGAAGAGAATTGAAAATGCAGGAGGAGTTGTCATTTGGGCTGGTACTTGGAGGGTAGGAGGTGTACTGGCAATGTCGCGTGCATTTGGCAATCGTCTACTGAAGCCATTTGTGGTGGCAGAGCCTGAAATTCAGGAAGAACTTGTCAATGAAGACTTGGAATGCCTCGTTCTTGCTAGCGATGGACTTTGGGATGTCGTGGAAAATGAGGAAGCTGTTTCCCTTGCGAAAACAGAAGACCTGCCTGAGTCGGTGGCTAGGAAACTCACGGAAATAGCCTATTCTCGAGGCAGCGCTGACAACATTACATGCATCGTGGTGCAATTTCACCATGATAAAACTGAATAATAAGATGGGACTAGAGCTGATGAAAGGTTGAAGGTTTTTCTACTTCAAGCTACTTTCCAGCAGTCCAACCACAGAGGGGGTTCCCCAGGAGATGTTGCTCCTGTAGCATTTGCTAAGGATTGTTTCGTTGATTCTTTTCCTTGTGTAGGAATCATTTTTTGTTTTCAGAGGTGTTACGAACAGAAAATTTTATTTCGAGTGTAACACACAGTTTTAATTGGATGGATACTAATAAATCAATTGCT                                                           ]
[+] EMBL AK060458             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGATGAGCGGAAGAGAATTGAAAATGCAGGAGGAGTTGTCATTTGGGCTGGTACTTGGAGGGTAGGAGGTGTACTGGCAATGTCGCGTGCATTTGGCAATCGTCTACTGAAGCCATTTGTGGTGGCAGAGCCTGAAATTCAGGAAGAACTTGTCAATGAAGACTTGGAATGCCTCGTTCTTGCTAGCGATGGACTTTGGGATGTCGTGGAAAATGAGGAAGCTGTTTCCCTTGCGAAAACAGAAGACCTGCCTGAGTCGGTGGCTAGGAAACTCACGGAAATAGCCTATTCTCGAGGCAGCGCTGACAACATTACATGCATCGTGGTGCAATTTCACCATGATAAAACTGAATAATAAGATGGGACTAGAGCTGATGAAAGGTTGAAGGTTTTTCTACTTCAAGCTACTTTCCAGCAGTCCAACCACAGAGGGGGTTCCCCAGGAGATGTTGCTCCTGTAGCATTTGCTAAGGATTGTTTCGTTGATTCTTTTCCTTGTGTAGGAATCATTTTTTGTTTTCAGAGGTGTTACGAACAGAAAATTTTATTTCGAGTGTAACACACAGTTTTAATTGGATGGATACTAATAAATCAATTGC                                                            ]


>consensus_8834#0 GCCTCGATCGCGGCGGTGGCGGTGGGGAGGGGAGCGCACCGCCTGCCCAGCCATGAGATG GTATGCTTCGCTAGCCTGAGGAGGGCTCTGCCTCTGCTGCTGCGCGCCACCACCACCACC ACCCCCCGCTTCCTTCTCCCCAGGGCCCTCTCCGGCGGCGTTGGCGGCGGGGCGGCGGTG GATGCGCGCGCGCTTCTCCGTGGGCACAGCGGGTGGCGCGGGCTCCGGGTGGCCGCCAGG ATGATGCTCGACTCCTCCGACTCCGCCGCCGCTGCGGGGCAGATGCAGCCGCAGCAGCGT GCGGCGGGGGCCGTCGCCTGCAGCGCGCAGGACGGTGGTGCCGCAGGGTACGCCAGCGGC GGGTGGGCGAGAGAAGATGGTAAACTGAAATGTGGATATTCAAGTTTTAGAGGGAAGAGA GCCACCATGGAGGATTTCTATGATGTAAAGTTAACTGAAATCGATGGACAGGCTGTTAGC CTATTTGGTGTATTTGATGGTCATGGAGGACCACGTGCTGCTGAGTATTTGAAGGAAAAT TTGTTCGAAAATCTTCTGAAACACCCTGAGTTCCTGACAGATACAAAGCTTGCCATAAGT GAAACATATCAGAAAACAGATACAGATTTCTTAGAATCAGAATCCAATGCCTTCAGGGAT GATGGTTCAACAGCTTCCACTGCAGTTTTGGTGGGTGGCCATCTATATGTAGCAAATGTT GGTGATTCCCGTGCTGTTGTTTCAAAAGCTGGTAAAGCTATGGCACTGTCAGAAGATCAC AAACCTAACAGGAGTGATGAGCGGAAGAGAATTGAAAATGCAGGAGGAGTTGTCATTTGG GCTGGTACTTGGAGGGTAGGAGGTGTACTGGCAATGTCGCGTGCATTTGGCAATCGTCTA CTGAAGCCATTTGTGGTGGCAGAGCCTGAAATTCAGGAAGAACTTGTCAATGAAGACTTG GAATGCCTCGTTCTTGCTAGCGATGGACTTTGGGATGTCGTGGAAAATGAGGAAGCTGTT TCCCTTGCGAAAACAGAAGACCTGCCTGAGTCGGTGGCTAGGAAACTCACGGAAATAGCC TATTCTCGAGGCAGCGCTGACAACATTACATGCATCGTGGTGCAATTTCACCATGATAAA ACTGAATAATAAGATGGGACTAGAGCTGATGAAAGGTTGAAGGTTTTTCTACTTCAAGCT ACTTTCCAGCAGTCCAACCACAGAGGGGGTTCCCCAGGAGATGTTGCTCCTGTAGCATTT GCTAAGGATTGTTTCGTTGATTCTTTTCCTTGTGTAGGAATCATTTTTTGTTTTCAGAGG TGTTACGAACAGAAAATTTTATTTCGAGTGTAACACACAGTTTTAATTGGATGGATACTA ATAAATCAATTGCTTGTTTACCTAATTACCTGCCATTACGGGCATGGCATATAATTCTCG ATGATATATAGTT



consensusID : consensus_8834#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 776
fasta sequence
                              [AGATCCCCCAACCCCATTATTAACCCACCGACCCCCGCGCGCGCCACTGGATCTCGCCTCGATCGCGGCGGTGGCGGTGGGGAGGGGAGCGCACCGCCTGCCCAGCCATGAGATGGTATGCTTCGCTAGCCTGAGGAGGGCTCTGCCTCTGCTGCTGCGCGCCACCACCACCACCACCCCCCGCTTCCTTCTCCCCAGGGCCCTCTCCGGCGGCGTTGGCGGCGGGGCGGCGGTGGATGCGCGCGCGCTTCTCCGTGGGCACAGCGGGTGGCGCGGGCTCCGGGTGGCCGCCAGGATGATGCTCGACTCCTCCGACTCCGCCGCCGCTGCGGGGCAGATGCAGCCGCAGCAGCGTGCGGCGGGGGCCGTCGCCTGCAGCGCGCAGGACGGTGGTGCCGCAGGGTACGCCAGCGGCGGGTGGGCGAGAGAAGATGGTAAACTGAAATGTGGATATTCAAGTTTTAGAGGGAAGAGAGCCACCATGGAGGATTTCTATGATGTAAAGTTAACTGAAATCGATGGACAGGCTGTTAGCCTATTTGGTGTATTTGATGGTATGGTTTCCATCTTTCCTTGTCTACTTTCGTGATTCCGTGCCCACCATGTTTTTCTTTTGAAGATTTGGTGCATTAGGTCATGGAGGACCACGTGCTGCTGAGTATTTGAAGGAAAATTTGTTCGAAAATCTTCTGAAACACCCTGAGTTCCTGACAGATACAAAGCTTGCCATAAGTGAAACATATCAGAAAACAGATACAGATTTCTTAGAATCAGAA]

[+] EMBL CB644163             [AGATCCCCCAACCCCATTATTAACCCACCGACCCCCGCGCGCGCCACTGGATCTCGCCTCGATCGCGGCGGTGGCGGTGGGGAGGGGAGCGCACCGCCTGCCCAGCCATGAGATGGTATGCTTCGCTAGCCTGAGGAGGGCTCTGCCTCTGCTGCTGCGCGCCACCACCACCACCACCCCCCGCTTCCTTCTCCCCAGGGCCCTCTCCGGCGGCGTTGGCGGCGGGGCGGCGGTGGATGCGCGCGCGCTTCTCCGTGGGCACAGCGGGTGGCGCGGGCTCCGGGTGGCCGCCAGGATGATGCTCGACTCCTCCGACTCCGCCGCCGCTGCGGGGCAGATGCAGCCGCAGCAGCGTGCGGCGGGGGCCGTCGCCTGCAGCGCGCAGGACGGTGGTGCCGCAGGGTACGCCAGCGGCGGGTGGGCGAGAGAAGATGGTAAACTGAAATGTGGATATTCAAGTTTTAGAGGGAAGAGAGCCACCATGGAGGATTTCTATGATGTAAAGTTAACTGAAATCGATGGACAGGCTGTTAGCCTATTTGGTGTATTTGATGGTATGGTTTCCATCTTTCCTTGTCTACTTTCGTGATTCCGTGCCCACCATGTTTTTCTTTTGAAGATTTGGTGCATTAGGTCATGGAGGACCACGTGCTGCTGAGTATTTGAAGGAAAATTTGTTCGAAAATCTTCTGAAACACCCTGAGTTCCTGACAGATACAAAGCTTGCCATAAGTGAAACATATCAGAAAACAGATACAGATTTCTTAGAATCAGAA]


>consensus_8834#1 AGATCCCCCAACCCCATTATTAACCCACCGACCCCCGCGCGCGCCACTGGATCTCGCCTC GATCGCGGCGGTGGCGGTGGGGAGGGGAGCGCACCGCCTGCCCAGCCATGAGATGGTATG CTTCGCTAGCCTGAGGAGGGCTCTGCCTCTGCTGCTGCGCGCCACCACCACCACCACCCC CCGCTTCCTTCTCCCCAGGGCCCTCTCCGGCGGCGTTGGCGGCGGGGCGGCGGTGGATGC GCGCGCGCTTCTCCGTGGGCACAGCGGGTGGCGCGGGCTCCGGGTGGCCGCCAGGATGAT GCTCGACTCCTCCGACTCCGCCGCCGCTGCGGGGCAGATGCAGCCGCAGCAGCGTGCGGC GGGGGCCGTCGCCTGCAGCGCGCAGGACGGTGGTGCCGCAGGGTACGCCAGCGGCGGGTG GGCGAGAGAAGATGGTAAACTGAAATGTGGATATTCAAGTTTTAGAGGGAAGAGAGCCAC CATGGAGGATTTCTATGATGTAAAGTTAACTGAAATCGATGGACAGGCTGTTAGCCTATT TGGTGTATTTGATGGTATGGTTTCCATCTTTCCTTGTCTACTTTCGTGATTCCGTGCCCA CCATGTTTTTCTTTTGAAGATTTGGTGCATTAGGTCATGGAGGACCACGTGCTGCTGAGT ATTTGAAGGAAAATTTGTTCGAAAATCTTCTGAAACACCCTGAGTTCCTGACAGATACAA AGCTTGCCATAAGTGAAACATATCAGAAAACAGATACAGATTTCTTAGAATCAGAA



consensusID : consensus_8834#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 566
fasta sequence
                              [GGAGGTGTACTGGCAATGTCGCGTGCATTTGGCAATCGTCTACTGAAGCCATTTGTGGTGGCAGAGCCTGAAATTCAGGAAGAACTTGTCAATGAAGACTTGGAATGCCTCGTTCTTGCTAGCGATGGACTTTGGGATGTCGTGGAAAATGAGGAAGCTGTTTCCCTTGCGAAAACAGAAGACCTGCCTGAGTCGGTGGCTAGGAAACTCACGGAAATAGCCTATTCTCGAGGCAGCGCTGACAACATTACATGCATCGTGGTGCAATTTCACCATGATAAACTGAATAATAAGATGGGACTAGAGCTGATGAAAGGTTGAAGGTTTTTCTACTTCAAGCTACTTTCCAGCAGTCCAACCACAGAGGGGGTTCCCCAGGAGATGTTGCTCCTGTAGCAATTGCTAAGGATTGTTTCGTTGATTCTTTTCCTTGTGTAGGAATCATTTTTTGTTTTCAGAGGTGTTACGAACAGAAAATTTTATTTTGAGTGTAACACACAGTTTTAATTGGATGGATACTAATAAATCAATTGCTTGTTTACCTNNNNNNNNNNNNNNNNNNNNNN]

[-] EMBL CA753700             [GGAGGTGTACTGGCAATGTCGCGTGCATTTGGCAATCGTCTACTGAAGCCATTTGTGGTGGCAGAGCCTGAAATTCAGGAAGAACTTGTCAATGAAGACTTGGAATGCCTCGTTCTTGCTAGCGATGGACTTTGGGATGTCGTGGAAAATGAGGAAGCTGTTTCCCTTGCGAAAACAGAAGACCTGCCTGAGTCGGTGGCTAGGAAACTCACGGAAATAGCCTATTCTCGAGGCAGCGCTGACAACATTACATGCATCGTGGTGCAATTTCACCATGATAAACTGAATAATAAGATGGGACTAGAGCTGATGAAAGGTTGAAGGTTTTTCTACTTCAAGCTACTTTCCAGCAGTCCAACCACAGAGGGGGTTCCCCAGGAGATGTTGCTCCTGTAGCAATTGCTAAGGATTGTTTCGTTGATTCTTTTCCTTGTGTAGGAATCATTTTTTGTTTTCAGAGGTGTTACGAACAGAAAATTTTATTTTGAGTGTAACACACAGTTTTAATTGGATGGATACTAATAAATCAATTGCTTGTTTACCTNNNNNNNNNNNNNNNNNNNNNN]


>consensus_8834#2 GGAGGTGTACTGGCAATGTCGCGTGCATTTGGCAATCGTCTACTGAAGCCATTTGTGGTG GCAGAGCCTGAAATTCAGGAAGAACTTGTCAATGAAGACTTGGAATGCCTCGTTCTTGCT AGCGATGGACTTTGGGATGTCGTGGAAAATGAGGAAGCTGTTTCCCTTGCGAAAACAGAA GACCTGCCTGAGTCGGTGGCTAGGAAACTCACGGAAATAGCCTATTCTCGAGGCAGCGCT GACAACATTACATGCATCGTGGTGCAATTTCACCATGATAAACTGAATAATAAGATGGGA CTAGAGCTGATGAAAGGTTGAAGGTTTTTCTACTTCAAGCTACTTTCCAGCAGTCCAACC ACAGAGGGGGTTCCCCAGGAGATGTTGCTCCTGTAGCAATTGCTAAGGATTGTTTCGTTG ATTCTTTTCCTTGTGTAGGAATCATTTTTTGTTTTCAGAGGTGTTACGAACAGAAAATTT TATTTTGAGTGTAACACACAGTTTTAATTGGATGGATACTAATAAATCAATTGCTTGTTT ACCTNNNNNNNNNNNNNNNNNNNNNN



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8834#0      GCCTCGATCGCGGCGGTGGCGGTGGGGAGGGGAGCGCACCGCCTGCCCAGCCATGAGATG 60
consensus_8834#2      ------------------------------------------------------------
consensus_8834#1      ------------------------------------------------------------
                                                                                  

consensus_8834#0      GTATGCTTCGCTAGCCTGAGGAGGGCTCTGCCTCTGCTGCTGCGCGCCACCACCACCACC 120
consensus_8834#2      ------------------------------------------------------------
consensus_8834#1      ------------------------------------------------------------
                                                                                  

consensus_8834#0      ACCCCCCGCTTCCTTCTCCCCAGGGCCCTCTCCGGCGGCGTTGGCGGCGGGGCGGCGGTG 180
consensus_8834#2      ------------------------------------------------------------
consensus_8834#1      ------------------------------------------------------------
                                                                                  

consensus_8834#0      GATGCGCGCGCGCTTCTCCGTGGGCACAGCGGGTGGCGCGGGCTCCGGGTGGCCGCCAGG 240
consensus_8834#2      ------------------------------------------------------------
consensus_8834#1      ------------------------------------------------------------
                                                                                  

consensus_8834#0      ATGATGCTCGACTCCTCCGACTCCGCCGCCGCTGCGGGGCAGATGCAGCCGCAGCAGCGT 300
consensus_8834#2      ------------------------------------------------------------
consensus_8834#1      ------------------------------------------------------------
                                                                                  

consensus_8834#0      GCGGCGGGGGCCGTCGCCTGCAGCGCGCAGGACGGTGGTGCCGCAGGGTACGCCAGCGGC 360
consensus_8834#2      ------------------------------------------------------------
consensus_8834#1      ------------------------------------------------------------
                                                                                  

consensus_8834#0      GGGTGGGCGAGAGAAGATGGTAAACTGAAATGTGGATATTCAAGTTTTAGAGGGAAGAGA 420
consensus_8834#2      ------------------------------------------------------------
consensus_8834#1      ------------------------------------------------------------
                                                                                  

consensus_8834#0      GCCACCATGGAGGATTTCTATGATGTAAAGTTAACTGAAATCGATGGACAGGCTGTTAGC 480
consensus_8834#2      ------------------------------------------------------------
consensus_8834#1      ------------------------------------------------------------
                                                                                  

consensus_8834#0      CTATTTGGTGTATTTGATGGTCATGGAGGACCACGTGCTGCTGAGTATTTGAAGGAAAAT 540
consensus_8834#2      ------------------------------------------------------------
consensus_8834#1      ------------------------------------------------------------
                                                                                  

consensus_8834#0      TTGTTCGAAAATCTTCTGAAACACCCTGAGTTCCTGACAGATACAAAGCTTGCCATAAGT 600
consensus_8834#2      ------------------------------------------------------------
consensus_8834#1      ------------------------------------------------------------
                                                                                  

consensus_8834#0      GAAACATATCAGAAAACAGATACAGATTTCTTAGAATCAGAATCCAATGCCTTCAGGGAT 660
consensus_8834#2      ------------------------------------------------------------
consensus_8834#1      ------------------------------------------------------------
                                                                                  

consensus_8834#0      GATGGTTCAACAGCTTCCACTGCAGTTTTGGTGGGTGGCCATCTATATGTAGCAAATGTT 720
consensus_8834#2      ------------------------------------------------------------
consensus_8834#1      ----------------------------------------------AGATCCCCCAACCC 14
                                                                                  

consensus_8834#0      GGTGATTCCCGTGCTGTTGTTTCAAAAGCTGGTAAAGCTATGGCACTGTCAGAAGATCAC 780
consensus_8834#2      ------------------------------------------------------------
consensus_8834#1      CATTATTAACCCACCGACCCCCGCGCGCGCCACTGGATCTCGCCTCGATCGCGGCGGTGG 74
                                                                                  

consensus_8834#0      AAACCTAACAGGAGTGATGAGCGGAAGAGAATTGAAAATGCAGGAGGAGTTGTCATTTGG 840
consensus_8834#2      ------------------------------------------------------------
consensus_8834#1      CGGTGGGGAGGGGAGCGCACCGCCTGCCCAGCCATGAGATGGTATGCTTCGCTAGCCTGA 134
                                                                                  

consensus_8834#0      GCTGGTACTTGGAGGGTAGGAGGTGTACTGGCAATGTCGCGTGCATTTGGCAATCGTCTA 900
consensus_8834#2      ------------------GGAGGTGTACTGGCAATGTCGCGTGCATTTGGCAATCGTCTA 42
consensus_8834#1      GGAGGGCTCTGCCTCTGCTGCTGCGCGCCACCACCACCACCACCCCCCGCTTCCTTCTCC 194
                                         *  * *  *   **    * *   *    *           

consensus_8834#0      CTGAAGCCATTTG---------TGGTGGCAGAGC--CTGAAATTCAGGAAGAACTTGTCA 949
consensus_8834#2      CTGAAGCCATTTG---------TGGTGGCAGAGC--CTGAAATTCAGGAAGAACTTGTCA 91
consensus_8834#1      CCAGGGCCCTCTCCGGCGGCGTTGGCGGCGGGGCGGCGGTGGATGCGCGCGCGCTTCTCC 254
                      *    *** * *          *** *** * **  * *    *  *   *  *** ** 

consensus_8834#0      ATGAAGACTTGGAATGCCTCGTTCTTGCTAGCGATGGACTTTGGGATGTCG-TGGAAAAT 1008
consensus_8834#2      ATGAAGACTTGGAATGCCTCGTTCTTGCTAGCGATGGACTTTGGGATGTCG-TGGAAAAT 150
consensus_8834#1      GTGGGCACAGCGGGTGGCGCGG----GCTCCGGGTGGCCGCCAGGATGATGCTCGACTCC 310
                       **   **   *  ** * **     ***   * *** *    *****  * * **    

consensus_8834#0      GAGGAAGCTGTTTCCCTTGCGAAAACAGAAGACCTGCCTGAGTCGGTGGCTAGGAAACTC 1068
consensus_8834#2      GAGGAAGCTGTTTCCCTTGCGAAAACAGAAGACCTGCCTGAGTCGGTGGCTAGGAAACTC 210
consensus_8834#1      TCCGACTCCGCCGCCGCTGCGGGGCAGATGCAGCCGCAGCAGCGTGCGGCGGGGGCCGTC 370
                         **  * *   **  ****          * * **   **   * ***  **    **

consensus_8834#0      ACGGAAATAGCCTATTCTCGAGGCAGCGCTGACAACATTACATGCATCGTGGTGCAATTT 1128
consensus_8834#2      ACGGAAATAGCCTATTCTCGAGGCAGCGCTGACAACATTACATGCATCGTGGTGCAATTT 270
consensus_8834#1      GCCTGCAGCGCGCAGGACGGTGGTGCCGCAGGGTACGCCAGCGGCGGGTGGGCGAGAGAA 430
                       *    *  **  *     * **   *** *   **   *   **     ** *  *   

consensus_8834#0      CACCATGAT---AAAACTGAATAAT-AAGATGGGACTAGAGCTGATGAAAGGTTGAAGGT 1184
consensus_8834#2      CACCATGAT---AAA-CTGAATAAT-AAGATGGGACTAGAGCTGATGAAAGGTTGAAGGT 325
consensus_8834#1      GATGGTAAACTGAAATGTGGATATTCAAGTTTTAGAGGGAAGAGAGCCACCATGGAGGAT 490
                       *   * *    ***  ** *** * *** *       **   **   *   * ** * *

consensus_8834#0      TTTTCTACTTCAAGCTACTTTCCAGCAGTCCAACCACAGAGGGGGTTCCCCAGGAGATGT 1244
consensus_8834#2      TTTTCTACTTCAAGCTACTTTCCAGCAGTCCAACCACAGAGGGGGTTCCCCAGGAGATGT 385
consensus_8834#1      TTCTATGATGTAA---AGTTAACTGAAATCGATGGACAG-GCTGTTAGCCTATTTGGTGT 546
                      ** * *  *  **   * **  * * * ** *   **** *  * *  ** *   * ***

consensus_8834#0      TGCTCCTGTAGCATTTGCTAAGGATTGTTTCGTTGATTCTTTTCCTTGTGTAGGAATCAT 1304
consensus_8834#2      TGCTCCTGTAGCAATTGCTAAGGATTGTTTCGTTGATTCTTTTCCTTGTGTAGGAATCAT 445
consensus_8834#1      ATTTGATGGTATGGTTTCCATC--TTTCCTTGTCTACTTTCGTGATTCCGTGCCCACCAT 604
                         *  **      ** * *    **   * **  * * *  *  **  **    * ***

consensus_8834#0      TTTTTGTTTTCAGAGGTGTTACGAAC-AGAAAATTTTATTTCGAGTGTAACACACAGTTT 1363
consensus_8834#2      TTTTTGTTTTCAGAGGTGTTACGAAC-AGAAAATTTTATTTTGAGTGTAACACACAGTTT 504
consensus_8834#1      GTTTTTCTTTTGAAGATTTGGTGCATTAGGTCATGGAGGACCACGTGCTGCTGAGTATTT 664
                       ****  ***   ** * *   * *  **   **          ***   *  *   ***

consensus_8834#0      TAATTGGATGGATACTAATAAATCAATTG------CTTGTTTACCTAATTACCTGCCATT 1417
consensus_8834#2      TAATTGGATGGATACTAATAAATCAATTG------CTTGTTTACCTNNNNNNNNNNNNNN 558
consensus_8834#1      GAAG-GAAAATTTGTTCGAAAATCTTCTGAAACACCCTGAGTTCCTGACAGATACAAAGC 723
                       **  * *    *  *   *****   **      * **  * ***              

consensus_8834#0      ACGGGCATGGCATATAATTCTCGATGATATATAGTT----------------- 1453
consensus_8834#2      NNNNNNNN--------------------------------------------- 566
consensus_8834#1      TTGCCATAAGTGAAACATATCAGAAAACAGATACAGATTTCTTAGAATCAGAA 776
                                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)