These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8835#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1682 fasta sequence [CGCCACCGCCGCCCCGCGCCTCCGCGCCGCCGCGTGGGGCAGCCTCTCGCCGCCGGCGCCAGTGCGGGCGCAGTTCGTGAGTCTCCCGCTCAGTCTCCCCGGCCGCTACGCCTCGCTGCGCCTGCGCGCCTCGGCGGCGGCGGCGGCGAAGGAAGGGGCGGAGGAGATGGGGTTCGAGGAGATGGCGGCCGGGACGCGGAGGCGCTACTACATGCTCGGCGGGAAGGGCGGGGTCGGGAAGACGAGCTGCGCGGCGTCGCTGGCCGTGCGCTTCGCCAACAACGGGCACCCCACCCTCGTCGTCTCCACCGACCCCGCGCACTCCCTCAGCGACTCCTTCGCGCAGGATTTGAGCGGCGGGGCGCTCGTGCCGGTCGAGGGGCCTGAGGCGCCATTGTTTGCGCTTGAGATAAATCCTGAGAAAGCCCGAGAAGAGTTTCGTGCAGCAAGTCAGAAGAATGGAGGGACTGGGGTAAAGGACTTCATGGATGGCATGGGACTGGGAGTGCTTGCTGAGCAGCTGGGGGAGTTAAAACTGGGGGAGTTATTGGACACACCACCACCAGGATTGGATGAAGCAATAGCGATTTCAAAGGTTATGCAATTCCTTGAAGCACAAGAGTATAGCATGTTTAGACGCATTGTTTTTGACACTGCTCCAACGGGCCATACACTCCGTTTATTATCCTTGCCAGATTTCCTGGATGCATCTATTGGGAAGATCTTGAAGCTTAGGAGCAAGATCGCTTCTGCAACATCAGCTATTAAATCAGTTTTTGGACAAGAAGTTCAACAGCAGGATGCAGCAAACAAATTGGAGCAGCTGAGAGAAAGGATGGTCCAAGTGCGAGAACTTTTTCGTGACACAGAATCAACTGAATTTATAATTGTGACTATTCCAACAGTGATGGCAATAAGTGAATCAGCAAGACT-ACATTCTTCCCTAAGAAATGAAAGTGTTCCCGTTAAGAGACTCATTGTTAACCAAATTCTACCACCTTCGTCATCAGACTGTAAATTCTGTGCTATAAAAAGAAAGGATCAAACACGTGCTTTGGATATGATAAGGAATGATCCAGAGCTAATGGGGCTGAACTTAATCCAAGCACCTCTTGTCGACATGGAAATAAGAGGCGTTCCTGCTCTGAAGTTTTTGGGCGATATAGTATGGAAGTAACTTCACAATGGAAAATACGATAAACTTCATCACACCTACTTATTGAAGTGCTTTGCAATGCAAACTTTGGTAGCTGCAAGTATCAGCATGGATAGAGCTAGAATGCAAGTGTGCAACTTAGCAGATGCCCAATCTCATGTGAGTAAGTAGCATCTCGCTGAAGGTTTGCCGGAATAGCATATACTAGGGGGATTGTGTTCTAAAAAAAAA-----GGGGGGGGGATTGGAT-CAAGCTGCACTAATATCAAGTCCATTGAGGCAACATGCCGGTGATATTTCTGCTTCTTTATCCCTTTAATAGGAGCGATTCTGAGGGTTTTGAGTCCATAACTTTGCACTAAAATTAATTTTGTTCGTGCATCATGTAAAGTCGGTTAGAGAATGAAGAATGGAGAAAATCAGACAACACTTTTAAGTAAAAAAAAAAAAAGATTAGTGTGACTTANATGTAAATAGACNATATTGACAAGACAGCTGCAGCAGTTGAGATTTTAATTTAAAAAAAAAA] [+] EMBL CB683545 [CGCCACCGCCGCCCCGCGCCTCCGCGCCGCCGCGTGGGGCAGCCTCTCGCCGCCGGCGCCAGTGCGGGCGCAGTTCGTGAGTCTCCCGCTCAGTCTCCCCGGCCGCTACGCCTCGCTGCGCCTGCGCGCCTCGGCGGCGGCGGCGGCGAAGGAAGGGGCGGAGGAGATGGGGTTCGAGGAGATGGCGGCCGGGACGCGGAGGCGCTACTACATGCTCGGCGGGAAGGGCGGGGTCGGGAAGACGAGCTGCGCGGCGTCGCTGGCCGTGCGCTTCGCCAACAACGGGCACCCCACCCTCGTCGTCTCCACCGACCCCGCGCACTCCCTCAGCGACTCCTTCGCGCAGGATTTGAGCGGCGGGGCGCTCGTGCCGGTCGAGGGGCCTGAGGCGCCATTGTTTGCGCTTGAGATAAATCCTGAGAAAGCCCGAGAAGAGTTTCGTGCAGCAAGTCAGAAGAATGGAGGGACTGGGGTAAAGGACTTCATGGATGGCATGGGACTGGGAGTGCTTGCTGAGCAGCTGGGGGAGTTAAAACTGGGGGAGTTATTGGACACACCACCACCAGGATTGGATGAAGCAATAGCGATTTCAAAGGTTATGCAATTCCTTGAAGCACAAGAGTATAGCATGTTTAGACGCATTGTTTTTGACACTGCTCCAACGGGCCATACACTCCGTTTATTATCCTTGCCAGATTTCCTGGATGCA ] [+] EMBL AK099676 [ GCCATTGTTTGCGCTTGAGATAAATCCTGAGAAAGCCCGAGAAGAGTTTCGTGCAGCAAGTCAGAAGAATGGAGGGACTGGGGTAAAGGACTTCATGGATGGCATGGGACTGGGAGTGCTTGCTGAGCAGCTGGGGGAGTTAAAACTGGGGGAGTTATTGGACACACCACCACCAGGATTGGATGAAGCAATAGCGATTTCAAAGGTTATGCAATTCCTTGAAGCACAAGAGTATAGCATGTTTAGACGCATTGTTTTTGACACTGCTCCAACGGGCCATACACTCCGTTTATTATCCTTGCCAGATTTCCTGGATGCATCTATTGGGAAGATCTTGAAGCTTAGGAGCAAGATCGCTTCTGCAACATCAGCTATTAAATCAGTTTTTGGACAAGAAGTTCAACAGCAGGATGCAGCAAACAAATTGGAGCAGCTGAGAGAAAGGATGGTCCAAGTGCGAGAACTTTTTCGTGACACAGAATCAACTGAATTTATAATTGTGACTATTCCAACAGTGATGGCAATAAGTGAATCAGCAAGACT ACATTCTTCCCTAAGAAATGAAAGTGTTCCCGTTAAGAGACTCATTGTTAACCAAATTCTACCACCTTCGTCATCAGACTGTAAATTCTGTGCTATAAAAAGAAAGGATCAAACACGTGCTTTGGATATGATAAGGAATGATCCAGAGCTAATGGGGCTGAACTTAATCCAAGCACCTCTTGTCGACATGGAAATAAGAGGCGTTCCTGCTCTGAAGTTTTTGGGCGATATAGTATGGAAGTAACTTCACAATGGAAAATACGATAAACTTCATCACACCTACTTATTGAAGTGCTTTGCAATGCAAACTTTGGTAGCTGCAAGTATCAGCATGGATAGAGCTAGAATGCAAGTGTGCAACTTAGCAGATGCCCAATCTCATGTGAGTAAGTAGCATCTCGCTGAAGGTTTGCCGGAATAGCATATACTAGGGGGATTGTGTTCTAAAAAAAAA GGGGGGGGGATTGGAT CAAGCTGCACTAATATCAAGTCCATTGAGGCAACATGCCGGTGATATTTCTGCTTCTTTATCCCTTTAATAGGAGCGATTCTGAGGGTTTTGAGTCCATAACTTTGCACTAAAATTAATTTTGTTCGTGCATCATGTAAAGTCGGTTAGAGAATGAAGAATGGAGAAAATCAGACAACACTTTTAAGT ] [-] EMBL CB683126 [ TGTTTAGACGCATTGTTTTTGACACTGCTCCAACGGGCCATACACTCCGTTTATTATCCTTGCCAGATTTCCTGGATGCATCTATTGGGAAGATCTTGAAGCTTAGGAGCAAGATCGCTTCTGCAACATCAGCTATTAAATCAGTTTTTGGACAAGAAGTTCAACAGCAGGATGCAGCAAACAAATTGGAGCAGCTGAGAGAAAGGATGGTCCAAGTGCGAGAACTTTTTCGTGACACAGAATCAACTGAATTTATAATTGTGACTATTCCACCAGTGATGGCAATAAGTGAATCAGCAAGACT ACATTCTTCCCTAAGAAATGAAAGTGTTCCCGTTAAGAGACTCATTGTTAACCAAATTCTACCACCTTCGTCATCAGACTGTAAATTCTGTGCTATAAAAAGAAAGGATCAAACACGTGCTTTGGATATGATAAGGAATGATCCAGAGCTAATGGGGCTGAACTTAATCCAAGCACCTCTTGTCGACATGGAAATAAGAGGCGTTCCTGCTCTGAAGTTTTTGGGCGATATAGTATGGAAGTAACTTCCCAATGGAAAATACGATAAACTTCATCACACCTACTTATTGAAGTGCTTTGCAATGCAAACTTTGGTAGCTGCAAGTATCAGCATGGATAGAGCTAGAATGCAAGTGTGCAACTTAGCAGATGCCCAATCTCATGTGAGTAAGTAGCATCTCGCTGAAGGTTTGCCGGAATAGCATATACTAGGGGGATTGTGTTCTAAAAAAAAA GGGGGGGGGATTGGATGCAAGCTCCACTAATATCAAGTCCATTGAGGCAAaaaaaagg ] [-] EMBL CB635631 [ TTGGGAAGATCTTGAAGCTTAGGAGCAAGATCGCTTTTGCAACATCAGCTATTAAATCAGTTTTTGGACAAGAAGTTCAACAGCAGGATGCAGCAAACAAATTGGAGCAGCTGAGAGAAAGGATGGTCCAAGTGCGAGAACTTTTTCGTGACACAGAATCAACTGAATTTATAATTGTGACTATTCCAACAGTGATGGCAATAAGTGAATCAGCAAGATT ACATTTTTCCCTAAGAAATGAGAGTGTTCCCGTTAAGAGACTCATTGTTAACCAAATTTTACCCCCTTCGTCATCAGACTGTAAATTTTGTGCTATAAAAAGAAAGGATCAAACACGTGCTTTGGATATGATAAGGAATGATCCAGAGCTAATGGGGCTGAACTTAATCCAAGCCCCTCTTGTCGACATGGAAATAAGAGGCGTTCCTGCTTTGAAGTTTTTGGGCGATATAGTATGGAAGTAACTTCCCAATGGAAAATACGATAAACTTCATCCCCCCTACTTATTGAAGTGCTTTGCAATGCAAACTTTGGTAGCTGCAAGTATCAGCATGGATAGAGCTAGAATGCAACTGTGCAACTTAGCAGATGCCCAATTTCATGTGAGTAAGTAGCATTTCGCTGAAGGTTTCCCGGAATAGCATATATTAGGGGGATTGTGTTTTAAAAAAAAAAAGGGGGGGGGGGGATTGGAT CAAGCTGCACTAATATCAAGTCCATTGAGGCAACATGCCAGTGATATTTCTGCTTCTT ] [-] EMBL CA762228 [ AGTGAATCAGCAAGACTNACATTCTTCCCTAAGAAATGAGAGTGTTCCCG TAAGAGACTCA TGTTAACCAAATTCTACCACNTTTGTCATCAGACTGTAAATTCTGTGCTATAAAAAGAAAGGATCAAACACGTGCTTNGGATATGATAAGGAATGATCCAGAGCTAATGGGGCTGAACTTAATCCAAGCACCTCTNGTCGACATGGAAACAAGAGGCGTTCCTGCTCTGAAGTTTTTGGGCGATATAGTATGGAACTAACTTCACAATGGAAAATACGATAAACTTCATCACACCTACTTATTGAAGTGCTTTGCAATGCAAACTTTGGTAGCTGCAAGTATCAGCATGGATAGAGCTAGAATGCAACTGTGCAACTTAGCAGATGCCCAATCTCATGTGAGTAAGTAGCATCTCGCTGAAGGTTTGCCGGAATAGCATTTACTAGGGGGATTGTGTTCTAAAAAAAAAAAGGGGGGGGGGGGATTGGAT CAAGCTGCACTAATATCAAGTCCATTGAGGCAACATGCCAGTGATATTTCTGCTTCTTTATCCCTTTAATAGGAGCGATTCTGAGGGTTTTGAGTCCATAACTTTGCACTAAAATTAATTTTGTTCGTGCATCATGTAAAGTCGGTTAGAGAATGAAGAATGGAGAAAATCAGACAACACTTTTAAGTAAAAAAAAAAAA ] [+] EMBL CA753844 [ AGCTGCAAGTATCAGCATGGATAGAGCTAGAATGCAAGTGTGCAACTTAGCAGATGCCCAATCTCATGTGAGTAAGTAGCATCTCGCTGAAGGTTTGCCGGAATAGCATATACTAGGGGGATTGTGTTCTAAAAAAAAA GGGGGGGGGATTGGAT CAAGCTGCACTAATATCAAGTCCATTGAGGCAACATGCCGGTGATATTTCTGCTTCTTTATCCCTTTAATAGGAGCGATTCTGAGGGTTTTGAGTCCATAACTTTGCACTAAAATTAATTTTGTTCGTGCATCATGTAAAGTCGGTTAGAGAATGAAGAATGGAGAAAATCAGACAACACTTTTAAGTAAATTTTCTTACAGATTAGTGTGACTTANATGTAAATAGACNATATTGACAAGACAGCTGCAGCAGTTGAGATTTTAATTTAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||