These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8841#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2000 fasta sequence [CACCACCACCACCACAACAACAGCAACAACCATCGGCTACGCCGCATCATCCCCCGAGTCCTCCTCGCCGTCTTCGCCATCTACGCCGTCTCGTTCGCGGCGTACCTCCTCCGCCACCAGTCGCCGCACCCGCACCCGCACCCTGCCGCTGACCCCGAGCGCGACGCCGTGGACGCAGCCGGAGGAGGCGGAGGAGGAGGAGCCGTGGACCGTGTGCGGGTAGAAGCGCCGTCCTCGCAGAAGCCATGGCCTCGCCTCCCCTCCTTCCTCCCGTGGACGTCCGCCTCCGTTCGGCCGCCGCCGAAGCACTCCTGTGAGGGGTACTTCGGGAACGGGTTCTCCCGCCTCGTGGACGTGCTCCCCGCGCGGGGCGGCGGCGGCGGCGGGTGGTTCCGGTGCCACCACAGCGAGACGCTGCGCAGCTCGATCTGCGAGGGCGGGAGGGTGCGGCTCGACCCGGGGCTCATCGCGATGTCGCGCGGCGGCGAGCCGCTCGACCAGGTGATGGGCCGCGCCGAGGAGGAGGAGCTGCCCAAGTACGAGCCCGGCGCGCTGCAGGTGGAGGCGGCGGCGAAGAGGACGGGGCCGTTGGTGGAAGCGGGGTTCCTCGACGCCTACGTGCCCACCGGCGGGATCGGGATGCACACGATGAGGTCGCTGCTCGACTCGGGGCGCGTCGTGCCGCCCGGCGAGCTACACTGCTCGCAGTGGGTTGAAGAACCAACACTTCTAGTAACTCGTTTTGAATATGCAAACCTTTTCCACACAATTACGGACTGGTACAGTGCATATGTCAGTTCCAGAGTCACGGATTTACCTAACCGCCCTAATGTGGTCTTTGTGGATGGACATTGCAAGGCACAACTGGAGCAAACATGGGAAGCACTTTTCTCAAATGTGACATATGTTAAGAATTTCTCTGGCCCTGTTTGTTTTCGACATGCAATTCTTTCACCATTGGGCTATGAGACTGCGCTATTTAAGGGCCTTAGTGAGAGCTTTAGCTGCGAAGGTGCTTCTGCGGAGTCCCTCAGAGAAAAGCCTGATCACCAGAAAACGGCAAGGTTGTCTGAATTTGGTGAGATGATTTTAGCTTCTTTTGATCTTCTGAGGGATGACATACTGTCATCCAAAACATCAAATGGGCTCAATGTTCTCTTTGTTCGGCGAGAGGACTACTTGGCCCATCCACGCCACAGTGGAAAGGTTGAATCTAGACTAAGCAATGAGAAGGAGGTATATGATGCAATTGAGGGCTGGGCAAAAGGTCAGAAATGCAAAATAAATGTCATCAATGGTCTTTTTGCCCACATGAACATGAAGGAGCAACTGCGTGCTATACAGGAAGCTTCAGTAGTAATAGGGGCACATGGGGCTGGTCTAACTCACTTGGTTTCAGCTACCCCAGATACAAAAGTCCTTGAAATCATCAGCAGCATGTATCGACGCCCACATTTTGCATTGATCTCACACTGGAAGAGCTTAGAGTATCATGCCATAAATCTCCCTGGATCATATGCAAGGGTAACAGATGTTATCAATGAGTTGAGTAATATACTGAAAGGTTTTGGATGCTGAGACAGAGCTAGGTATTCATCAGGAAAGTCACCATACTAACAACACAAATGCTTACAATTTCAATGGATGGGAAGGAGGTTATTTGCATCTGTGATCTGTGAACTGATGCATTACCAGGGCTCATCACTTCATCGGAGGAATTTTTATGCTGCCAAATGCAGAGAGAGATTGTGCTGACAAGTGACAATCTTTAATCTGCATATCGTGTGGAACAAGAAGGCAATCCTTCCCCCCTTCCTGACATCAGCCGACGACATGAAAACCAATCCATGCTGCGCACACTTTTCTACCAT-GAATTCATGGTCTTGA-GGACCGATCCTCAAACTGTAATTGTAATTCATCATTTGGGACATTCGGCGACAATTCTTGTATGTTAATGCATAATGTTGAGTGCTTCAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK101954 [CACCACCACCACCACAACAACAGCAACAACCATCGGCTACGCCGCATCATCCCCCGAGTCCTCCTCGCCGTCTTCGCCATCTACGCCGTCTCGTTCGCGGCGTACCTCCTCCGCCACCAGTCGCCGCACCCGCACCCGCACCCTGCCGCTGACCCCGAGCGCGACGCCGTGGACGCAGCCGGAGGAGGCGGAGGAGGAGGAGCCGTGGACCGTGTGCGGGTAGAAGCGCCGTCCTCGCAGAAGCCATGGCCTCGCCTCCCCTCCTTCCTCCCGTGGACGTCCGCCTCCGTTCGGCCGCCGCCGAAGCACTCCTGTGAGGGGTACTTCGGGAACGGGTTCTCCCGCCTCGTGGACGTGCTCCCCGCGCGGGGCGGCGGCGGCGGCGGGTGGTTCCGGTGCCACCACAGCGAGACGCTGCGCAGCTCGATCTGCGAGGGCGGGAGGGTGCGGCTCGACCCGGGGCTCATCGCGATGTCGCGCGGCGGCGAGCCGCTCGACCAGGTGATGGGCCGCGCCGAGGAGGAGGAGCTGCCCAAGTACGAGCCCGGCGCGCTGCAGGTGGAGGCGGCGGCGAAGAGGACGGGGCCGTTGGTGGAAGCGGGGTTCCTCGACGCCTACGTGCCCACCGGCGGGATCGGGATGCACACGATGAGGTCGCTGCTCGACTCGGGGCGCGTCGTGCCGCCCGGCGAGCTACACTGCTCGCAGTGGGTTGAAGAACCAACACTTCTAGTAACTCGTTTTGAATATGCAAACCTTTTCCACACAATTACGGACTGGTACAGTGCATATGTCAGTTCCAGAGTCACGGATTTACCTAACCGCCCTAATGTGGTCTTTGTGGATGGACATTGCAAGGCACAACTGGAGCAAACATGGGAAGCACTTTTCTCAAATGTGACATATGTTAAGAATTTCTCTGGCCCTGTTTGTTTTCGACATGCAATTCTTTCACCATTGGGCTATGAGACTGCGCTATTTAAGGGCCTTAGTGAGAGCTTTAGCTGCGAAGGTGCTTCTGCGGAGTCCCTCAGAGAAAAGCCTGATCACCAGAAAACGGCAAGGTTGTCTGAATTTGGTGAGATGATTTTAGCTTCTTTTGATCTTCTGAGGGATGACATACTGTCATCCAAAACATCAAATGGGCTCAATGTTCTCTTTGTTCGGCGAGAGGACTACTTGGCCCATCCACGCCACAGTGGAAAGGTTGAATCTAGACTAAGCAATGAGAAGGAGGTATATGATGCAATTGAGGGCTGGGTAAAAGGTCAGAAATGCAAAATAAATGTCATCAATGGTCTTTTTGCCCACATGAACATGAAGGAGCAACTGCGTGCTATACAGGAAGCTTCAGTAGTAATAGGGGCACATGGGGCTGGTCTAACTCACTTGGTTTCAGCTACCCCAGATACAAAAGTCCTTGAAATCATCAGCAGCATGTATCGACGCCCACATTTTGCATTGATCTCACACTGGAAGAGCTTAGAGTATCATGCCATAAATCTCCCTGGATCATATGCAAGGGTAACAGATGTTATCAATGAGTTGAGTAATATACTGAAAGGTTTTGGATGCTGAGACAGAGCTAGGTATTCATCAGGAAAGTCACCATACTAACAACACAAATGCTTACAATTTCAATGGATGGGAAGGAGGTTATTTGCATCTGTGATCTGTGAACTGATGCATTACCAGGGCTCATCACTTCATCGGAGGAATTTTTATGCTGCCAAATGCAGAGAGAGATTGTGCTGACAAGTGACAATCTTTAATCTGCATATCGTGTGGAACAAGAAGGCAATCCTTCCCCCCTTCCTGACATCAGCCGACGACATGAAAACCAATCCATGCTGCGCACACTTTTCTACCAT GAATTCATGGTCTTGA GGACCGATCCTCAAACTGTAATTGTAATTCATCATTTGGGACATTCGGCGACAATTCTTGTATGTTAATGCATAATGTTGAGTGCTTCtcc ] [+] EMBL CB000330 [ AAACATCAAATGGGCTCAATGTTCTCTTTGTCCCGCGAGAGGACTACTTGGCCCATCCACGCCACAGTGGAAAGGTTGAATCTAGACTAAGCAATGAGAAGGAGGCATATGATGCAATTGAGGGCTGGGCAAAAGGTCAGAAATGCAAAATAAATGTCATCAATGGTCTTTTTGCCCACATGAACATGAAGGAGCAACTGCGTGCTATACAGGAAGCTTCAGTAGTAATAGGGGCACATGGGGCTGGTCTAACTCACTTGGTTTCAGCTACCCCAGATACAAAAGTCCTTGAAATCATCAGCAGCATGTATCGACGCCCACATTTTGCATTGATCTCACACTGGAAGAGCTTAGAGTATCATGCCATAAATCTCCCTGGATCATATGCAAGGGTAACAGATGTTATCAATGAGTTGAGTAATATACTGAAAGGTTTTGGATGCTGAGACAGAGCTAGGTATTCATCAGGAAAGTCACCATACTAACAACACAAATGCTTACAATTTCAATGGATGGGAAGGAGGTTATTTGCATCTGTGATCTGTGAACTGATGCATTACCAGGGCTCATCACTTCATCGGAGGAATTTTTATGCTGCCAAATGCAGAGAGAGATTGTGCTGACAAGTGACAATCTTTAATCTGCATATCGTGTGGAACAAGAAGGCAATCCTTCCCCCCTTCCTGACATCAGCCGACGACATGAAAACCAATCCATGCTGCGCACACTTTTCTACCAT GAATTCATGGTCTTGA GGACCGATCCTCAAACTG ] [+] EMBL CB000901 [ ACATCAAATGGGCTCAATGTTCTCTTTGTTCGGCGAGAGGACTACTTGGCCCATCCACGCCACAGTGGAAAGGTTGAATCTAGACTAAGCAATGAGAAGGAGGTATATGATGCAATTGAGGGCTGGGCAAAAGGTCAGAAATGCAAAATAAATGTCATCAATGGTCTTTTTGCCCACATGAACATGAAGGAGCAACTGCGTGCTATACAGGAAGCTTCAGTAGTAATAGGGGCACATGGGGCTGGTCTAACTCACTTGGTTTCAGCTACCCCAGATACAAAAGTCCTTGAAATCATCAGCAGCATGTATCGACGCCCACATTT ] [+] EMBL OSS15079A [ AGAGCTTAGAGTATCATGCCATAAATCTCCCTGGATCATATGCAAGGGTAACAGATGTTATCAATGAGTTGAGTAATATACTGAAAGGTTTTGGATGCTGAGACAGAGCTAGGTATTCATCAGGAAAGTCACCATACTAACAACACAAATGCTTACAATTTCAATGGATGGGAAGGAGGTTATTTGCATCTGTGATCTGTGAACTGATGCATTACCAGGGCTCATCACTTCATCGGAGGAATTTTTATGCTGCCAAATGCAGAGAGAGATTGTGCTGACAAGTGACAATCTTTAATCTGCATATCGTGTGGAACAAGAAGGCAATCCTTCCCCCCTTCCTGACATCAGCCGACGACATGAAAACCAATCCATGCTGCG ACACTTTTCTACCATGGAATTCATGGTCTTGAGGGNCCG TCCTCAAACTGTAATTGTAATTC ] [+] EMBL CA757905 [ TGCCAAATGCAGAGAGAGATTGTGCTGACAAGTGACAATCTTTAATCTGCATATCGTGTGGAACAAGAAGGCAATCCTTCCCCCCTTCCTGACATCAGCCGACGACATGAAAACCAATCCATGCTGCGCACACTTTTCTACCAT GAATTCATGGTCTTGA GGACCGATCCTCAAACTGTAATTGTAATTCATCATTTGGGACATTCGGCGACAATTCTTGTATGTTAATGCATAATGTTGAGTGCTTCAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CA757446 [ TGCCAAATGCAGAGAGAGATTGTGCTGACAAGTGACAATCTTTAATCTGCATATCGTGTGGAACAAGAAGGCAATCCTTCCCCCCTTCCTGACATCAGCCGACGACATGAAAACCAATCCATGCTGCGCACACTTTTCTACCAT GAATTCATGGTCTTGA GGACCGATCCTCAAACTGTAATTGTAATTCATCATTTGGGACATTCGGCGACAATTCTTGTATGTTAATGCATAATGTTGAGTGCTTCANAAAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||