These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8842#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1463 fasta sequence [AAGCGAAGCCNCAGCCCGCCACTCGCCTCCGCCCTCCGCGCGCGCGAACCC--CTCCCTCGGCGGCGGCGACGACCAAGGCGGCGGCGGCGGCAGCGGCGCAAGAGGACGCGGTAGCCCGATGGCGCCGCTCGTGCCGTCCTCGCAGCCATGGGTGGAGAAATACCGGCCGAGGCAGGTGAAGGATGTCGCGCACCAGGAGGAGGTGGTCCGGGTGCTCACCACCACCCTCCAGACCGCCGACCTTCCGCACATG-CTGTTCTACG-GCCCGCCTG-GCA-CCGGGAAGACCACCACCGCGCTTGCCATTGCTTACCAGCTCTACGGTCCAGAGCTCTACAAGTCAAGAGTTCTAGAACTTAATGCTAGTGATGATCGTGGAATTAATGTGGTGAGGACTAAGATCAAGGACTTTGCTGCTGTTGCTGTTGGTTCTGCACGAAAAGGCGGTTATCCCTGCCCACCATACAAGATTATTATACTAGATGAAGCAGATTCGATGACAGAAGATGCCCAGAATGCTTTAAGGCGTACTATGGAGACTTACTCCAAAGTGACAAGATTCTTTTTCATATGCAATTACATCAGCAGGATAATAGAACCACTTGCATCAAGATGTGCAAAGTTTAGATTCAAGCCTCTTTCAGAAGAAGTAATGAGCAATCGCATTTTGCATATATGCAATGAAGAAGGGCTCAGTCTTGATGCTCAGGCATTGGCTACACTAAGCACCATCTCTAATGGTGACCTCCGCCGTGCTATAACCTATCTTCAGAGCGCTGCTCGCTTATTTGGATCTTCTATTTCTTCTACTGACTTGATTAGTGTTTCAGGGGCTATCCCTGAAGACGTTGTCAAGTCATTGCTTGCATCTTGCAAATCTGGTGAATTTGATGTGGCAAACAAGGAAGTCAATAATATTATTGCAGATGGATACCCCGTTTCACAGTTGATCTCACAGTTTCTAGATGTGATAGTTAATGCCGATGATATTCCAGATGAGCAGAAGGCAAGAATATGTAAAAAGCTTGGGGAAGCAGATAAGTGCTTGGTCGATGGAGCGGATGAGTATTTACAGCTTTTGGATGTGGCTAGTGAGACTATCCGCGCTCTTTTTGACATGCCACAAACGCTGGTCTTCTAAGAGAACATGGATTGGAAAGATGACGCAGGTGGCCATTTCTGCGAGGGATATCTTCTGTCTCCTTTCCAAGTTTAGGTTCT-GGGGGAAGCTCATTTTCTCGACAGACTGTTGTGCCTTTTTTATGTTTGTGATGGGGATTAAATAGTGTGAACTCCACCCTTGTAACCAACTGAATTGTGCACCAGTGTGTC---CATGGAAAGAATGGTTTTCGGCCTGTCATCTTGTACATCATGCATCATTTT-CTTGTTCTGCTTATGGNTNGATGGAACCTTGCATTGGCCTTTTCCCCGCTCTTTAAAAAAAAAAAAAAAACCTCCGGGGGGGG] [+] EMBL AB045677 [AAGCGAAGCCNCAGCCCACCACTCGCCTCCGCCCTCCGCGCGCGCGAACCCCTCTCCCTCGGCGGCGGCGACGACCAAGGCGGCGGCGGCG GCGG AAGAGGACGCGGTAGCCCGATGGCGCCGCTCGTGCCGTCCTCGCAGCCATGGGTGGAGAAATACCGGCCGAGGCAGGTGAAGGATGTCGCGCACCAGGAGGAGGTGGTCCGGGTGCTCACCACCACCCTCCAGACCGCCGACCTTCCGCACATG CTGTTCTACG GCCCGCCTG GCA CCGGGAAGACCACCACCGCGCTTGCCATTGCTTACCAGCTCTACGGTCCAGAGCTCTACAAGTCAAGAGTTCTAGAACTTAATGCTAGTGATGATCGTGGAATTAATGTGGTGAGGACTAAGATCAAGGACTTTGCTGCTGTTGCTGTTGGTTCTGCACGAAAAGGCGGTTATCCCTGCCCACCATACAAGATTATTATACTAGATGAAGCAGATTCGATGACAGAAGATGCCCAGAATGCTTTAAGGCGTACTATGGAGACTTACTCCAAAGTGACAAGATTCTTTTTCATATGCAATTACATCAGCAGGATAATAGAACCACTTGCATCAAGATGTGCAAAGTTTAGATTCAAGCCTCTTTCAGAAGAAGTAATGAGCAATCGCATTTTGCATATATGCAATGAAGAAGGGCTCAGTCTTGATGCTCAGGCATTGGCTACACTAAGCACCATCTCTAATGGTGACCTCCGCCGTGCTATAACCTATCTTCAGAGCGCTGCTCGCTTATTTGGATCTTCTATTTCTTCTACTGACTTGATTAGTGTTTCAGGGGCTATCCCTGAAGACGTTGTCAAGTCATTGCTTGCATCTTGCAAATCTGGTGAATTTGATGTGGCAAACAAGGAAGTCAATAATATTATTGCAGATGGATACCCCGTTTCACAGTTGATCTCACAGTTTCTAGATGTGATAGTTAATGCCGATGATATTCCAGATGAGCAGAAGGCAAGAATATGTAAAAAGCTTGGGGAAGCAGATAAGTGCTTGGTCGATGGAGCGGATGAGTATTTACAGCTTTTGGATGTGGCTAGTGAGACTATCCGCGCTCTTTTTGACATGCCACAAACGCTGGTCTTCTAAGAGAACATGGATTGGAAAGATGACGCAGGTGGCCATTTCTGCGAGGGATATCTTCTGTCTCCTTTCCAAGTTTAGGTTCT GGGGGAAGCTCATTTTCTCGACAGACTGTTGTGCCTTTTTTATGTTTGTGATGGGGATTAAATAGTGTGAACTCCACCCTTGTAACCAACTGAATTGTGCACCAGTGTGTC CATGGAAAGAATGGTTTTCGGCCTGTCAaaaaaaa ] [+] EMBL CB652983 [ AGCCGCAGCCCGCCACTCGCCTCCGCCCTCCGCGCGCGCGAACCC CTCCCTCGGCGGCGGCGACTACCAAGGCGGCGGCGGCGGCAGCGGCGCAAGAGGACGCGGTAGCCCGATGGCGCCGCTCGTGCCGTCCTCGCAGCCATGGGTGGAGAAATACCGGCCGAGGCAGGTGAAGGATGTCGCGCACCATGAGGAGGTGGTCCGGGTGCTCACCACCACCCTCCAGACCGCCGACCTTCCGCACATGTCTGTTCTACGAGCCCGCCTGTGCACCCGGGAAGACCACCACCGCGCTTGCCATTGCTTACCAGCTCTACGGTCCAGAGCTCTACAAGTCAAGAGTTCTAGAACTTAATGCTAGTGATGATCGTGGAATTAATGTGGTGAGGACTAAGATCAAGGACTTTGCTGCTGTTGCTGTTGGTTCTGCACGAAAAGGCGGTTATCCCTGCCCACCATACAAGATTATTATACTAGATGAAGCAGATTCGATGACAGAAGATGCCCAGAATGCTTTAAGGCGTACTATGGAGACTTACTCCAAAGTGACAAGATTCTTTTTCATATGCAATTACATCAGCAGGATAATAGAACCACTTGCATCAAGATGTGCAAAGTTTATATTCAAGCCTCTTTCAAAAGAAGTAATGAGCAATCGCATTTTGCATATATGCAATGAAGAAGGGCTCAGTCTTGATGCTCAGGCATTGGCTACACTAAGCACCATCTCTAATGGTGACCTCCGCCGTGCTATAACCTATCTTCATAGCGCTGCTCGCGTATTTGGATCTTCTATTTCT ] [+] EMBL CB677262 [ CAGCCCGCCACTCGCCTCCGCCCTCCGCGCGCGCGAACCC CTCCCTCGGCGGCGGCGACGACCAAGGCGGCGGCGGCGGCAGCGGCGCAAGAGGACGCGGTAGCCCGATGGCGCCGCTCGTGCCGTCCTCACAGCCATGGGTGGAGAAATACCGGCCGAGGCAGGTGAAGGATGTCGCGCACCAGGAGGAGGTGGTCCGGGTGCTCACCACCACCCTCCAGACCGCCGACCTTCCGCACATG CTGTTCTACG GCCCGCCTG GCA CCGGGAAGACCACCACCGCGCTTGCCATTGCTTACCAGCTCTACGGTCCAGAGCTCTACAAGTCAAGAGTTCTAGAACTTAATGCTAGTGATGATCGTGGAATTAATGTGGTGAGGACTAAGATCAAGGACTTTGCTGCTGTTGCTGTTGGTTCTGCACGAAAAGGCGGTTATCCCTGCCCACCATACAAGATTATTATACTAGATGAAGCAGATTCGATGACAGAAGATGCCCAGAATGCTTTAAGGCGTACTATGGAGACTTACTCCAAAGTGACAAGATTCTTTTTCATATGCAATTACATCAGCAGGATAATAGAACCACTTGCATCAAGATGTGCAAAGTTTAGATTCAAGCCTCTTTCAGAAGAAGTAATGAGCAATCGCATTTTGCATATATGCAATGAAGAAGGGCTCAGTCTTGATGCTCAGGCATTGGCTACACTAAGCACCATCTCTAATGGTGACCTCCGCCGTGCTATAACCTATCTTCAGAGCGCTGCTCGCTTATTTGGATCTTCTATTTCTTCT ] [+] EMBL AK103718 [ CCGCCCTCCGCGCGCGCGAACCC CTCCCTCGGCGGCGGCGACGACCAAGGCGGCGGCGGCGGCAGCGGCGCAAGAGGACGCGGTAGCCCGATGGCGCCGCTCGTGCCGTCCTCGCAGCCATGGGTGGAGAAATACCGGCCGAGGCAGGTGAAGGATGTCGCGCACCAGGAGGAGGTGGTCCGGGTGCTCACCACCACCCTCCAGACCGCCGACCTTCCGCACATG CTGTTCTACG GCCCGCCTG GCA CCGGGAAGACCACCACCGCGCTTGCCATTGCTTACCAGCTCTACGGTCCAGAGCTCTACAAGTCAAGAGTTCTAGAACTTAATGCTAGTGATGATCGTGGAATTAATGTGGTGAGGACTAAGATCAAGGACTTTGCTGCTGTTGCTGTTGGTTCTGCACGAAAAGGCGGTTATCCCTGCCCACCATACAAGATTATTATACTAGATGAAGCAGATTCGATGACAGAAGATGCCCAGAATGCTTTAAGGCGTACTATGGAGACTTACTCCAAAGTGACAAGATTCTTTTTCATATGCAATTACATCAGCAGGATAATAGAACCACTTGCATCAAGATGTGCAAAGTTTAGATTCAAGCCTCTTTCAGAAGAAGTAATGAGCAATCGCATTTTGCATATATGCAATGAAGAAGGGCTCAGTCTTGATGCTCAGGCATTGGCTACACTAAGCACCATCTCTAATGGTGACCTCCGCCGTGCTATAACCTATCTTCAGAGCGCTGCTCGCTTATTTGGATCTTCTATTTCTTCTACTGACTTGATTAGTGTTTCAGGGGCTATCCCTGAAGACGTTGTCAAGTCATTGCTTGCATCTTGCAAATCTGGTGAATTTGATGTGGCAAACAAGGAAGTCAATAATATTATTGCAGATGGATACCCCGTTTCACAGTTGATCTCACAGTTTCTAGATGTGATAGTTAATGCCGATGATATTCCAGATGAGCAGAAGGCAAGAATATGTAAAAAGCTTGGGGAAGCAGATAAGTGCTTGGTCGATGGAGCGGATGAGTATTTACAGCTTTTGGATGTGGCTAGTGAGACTATCCGTGCTCTTTTTGACATGCCACAAACGCTGGTCTTCTAAGAGAACATGGATTGGAAAGATGACGCAGGTGGCCATTTCTGCGAGGGATATCTTCTGTCTCCTTTCCAAGTTTAGGTTCT GGGGGAAGCTCATTTTCTCGACAGACTGTTGTGCCTTTTTTATGTTTGTGATGGGGATTAAATAGTGTGAACTCCACCCTTGTAACCAACTGAATTGTGCACCAGTGTGTC CATGGAAAGAATGGTTTTCGGCCTGTCATCTTGTACATCATGCATCATTTT CTTGTTCTGCTTAT ] [+] EMBL CA757798 [ AGATGTGCAAAGTTTAGATTCAAGCCTCTTTCAGAAGAAGTAATGAGCAATCGCATTTTGCATATATGCAATGAAGAAGGGCTCAGTCTTGATGCTCAGGCATTGGCTACACTAAGCACCATCTCTAATGGTGACCTCCGCCGTGCTATAACCTATCTTCAGAGCGCTGCTCGCTTATTTGGATCTTCTATTTCTTCTACTGACTTGATTAGTGTTTCAGGGGCTATCCCTGAAGACGTTGTCAAGTCATTGCTTGCATCTTGCAAATCTGGTGAATTTGATGTGGCAAACAAGGAAGTCAATAATATTATTGCAGATGGATACCCCGTTTCACAGTTGATCTCACAGTTTCTAGATGTGATAGTTAATGCCGATGATATTCCAGATGAGCAGAAGGCAAGAATATGTAAAAAGCTTGGGGAAGCAGATAAGTGCTTGGTCGATGGAGCGGATGAGTATTTACAGCTTTTGGATGTGGCTAGTGAGACTATCCGCGCTCTTTTTGACATGCCACAAACGCTGGTCTTCTAAGAGAACATGGATTGGAAAGATGACGCAGGTGGCCATTTCTGCGAGGGATATCTTCTGTCTCCTTTCCAGNTTTANGTTCTGGGGGGAAGCTCATTTTCTCGACAGACTGTTGTGCCTTTTTTATGTTTGTGATGNGGATTAAATAATGTGAACTCCACCCTTGTAACCAACTGAATTGTGCACCAGTGTGTCCATCATGGAAAG ATGGTTTTCGGCCTGTCATCTTGTACATCATGCATCATTTTCCTTGTTCTGCTAATGGNTNGATGGAACCTTGCATTGGCCTTTTCCCCGCTCTTTAAAAAAAAAAAAAAAACCTCCGGGGGGGG] [-] EMBL CB677263 [ GAAGAAGTAATGAGCAATCGCATTTTGCATATATGCAATGAAGAAGGGCTCAGTCTTGATGCTCAGGCATTGGTTACACTAAGCACCATCTCTAATGGTGACGTCCGCCGTGCTATAACATATCTTCAGAGCGCTGCTCGCTTATTTGGATCTTGTATTTGTTCTACTGACTTGACTAGTGTTTCAGGGGCTATCCCTGAAGACGTTGTCAAGTCATTGCTTGCATCTTGCAAATCTGGTGAATTTGATGTGGCAAACAAGGAAGTCAATAATATTATTGCAGATGGATACCCTGTTTCACAGTTGATCTCACAGTTTCTAGATGTGATAGTTAATGCCGATGATATTCCAGATGAGCAGAAGGCAAGAATATGTAAAAAGCTTGGGGAAGCAGATAAGTGCTTGGTCGATGGAGTGGATGAGTATTTACAGCTTTTGGATGTGGCTAGTGAGACTATCCGTGCTCTTTTTGACATGCCACAACCGCTGGTCTTCTTAGTGAACATGGATTGGAAAGATGACGCAGGTGGCCATTTATGTGAGGGATATCTTCTGTGTCCTTTCCAAGTTTAGGTTCT GGGGGAAGCTCATTTT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||