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Oryza sativa
cluster # 8859 cluster # 8859       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8859#0 length = 2283 sequences # 4  
consensus_8859#1 length = 809 sequences # 2  

consensusID : consensus_8859#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2283
fasta sequence
                              [AAGCCGTCGCCGTCGCCGCTGGAATGATCGGCGGCGTCGGCCGCAGCAGGCGGCGTGGCCGTGCGCCGCCAGTTCTGCCCTCGAGCGCCGCCGCCCGCCGCGCCGAGCACTCCGTCTCTTGCTGGTACTGTGACTGCAAAATATATTCCTTCAATGACATCATATTTAATTTGGGATGGAGATATGCTAGATGCTATTGTGGGACTCAATTGGTGCAGTTTATTTCAGTGGTCGGTCATTTAGTACCTGGCTACAAAATCTACTGGTGACTACAATTTGTCCCTTCATTTTTCAACTTCTAACATCAACCATTCAGCATGCCCTTAATCTATTGCAGGCTTCCAGCTTTGGCATATCAATAATGGACATCGCAGCAATCATAGCATCAACAGTTTTTTCTATTGCTTTTCACGAATTTGGACATGCTGTTGCAGCTGCAAGGTCCTTATTTGCTGACCTACATTTTCTACGAGATGTTCTGCATGTGTTTGCATTCATCTGCAGAAGGCATACTTTATATGTTGACTTACAATATTAACTTTCACCCGCTTACAGTATTCCTTTCGCACATTGCTGACACATTCATTGCTAAATATGCAACAGCGAGGGCATACAGATTGAGTATGTTGCGGTATTCGTAGCTGCACTTTTTCCTGGGGCATTAATTGCTCTGAACTGTGACCAGCTGCAAAATTTACCTCTTTTTTCTATGCTTCGGATTTATTGTGCAGGGATTTGGCATAATGTTATGTATTTGTGGCATGCATGCTAACCTATAGAGACCAGAAGTTGTGAATTAAAAAAAGGAGCACATTTGAGAAATGCCAGTTCGGCAGTTCTGCATTACTGCTGCAGCTTCTTATCATATTTTTGTAAGCACGTTCATTCATAATGATGTTTATTTATGATTTCATGTCTAATAGTTATGTGGAGTATGTGTCATCATGGCATTATTACTACCTGTGGTGCTGTATCCTCTCTTTGTGACTGGTGGTCTTATGATTACAGGAGTCCCAGAAGCATCTCCTCTGTCAGGATACTTGTCTGCTCACAATTTTATCCTTTCTGTGGATGGATTGAACATAACAAGAGCTGATGAATGGATGAAAATGCTTACTCAGGACAATGTAGTACAAATAAGCAGCCGTGATCTCCTTGAAGGCTCTGAAGGCTATCGTGCCACTGGTTCTAGAAAGGGTTACTGTGTTCCCAACTCATGGATGGATGCAAGCAAGAATCTTTGGCAGATAAATGACAAGCTATCTTGCCCAGATGATCTGGT-AGCC--TTTCAAAGAATGAGTGAGAAAGGTATTGGCAAGAAGGAAGTTGAAGACAAATATTGTTTGATTGCAAAAGATGTTGTCAAGCTTAAAAAATGTGGAAATGGATGGCGGGGGGCCGAAGATGGCAGAAGCAACTTTGCATGTTTGGAGGATGAGTACTGTTTGGTGCCTGTTCTAGGCCCTGGGATTTCATGGATAGAGATCTCTTATGCCAGACCTTATTCTTTGGAGTGCTTACAGAAAGAAAGGAACTCATCATTGCTGCATGATGGAAATAATAACCCTGGATTGGGTCCTTGCCAGGGAACTTTTGTTTATGCGGGTGATCTGTTATCAGCAGCACATTCTATTAAGTTATCCTCTTACCGACCTCGATGGCCTCTCTTGCTTTTCATTGCAGATGTTCCTCGTATCTTGCAAGATGGTTTAAGTTGTTTATTTCGTGTGTCTGCAGCATTGGCTGTAGTCAATTGCTTACCAGTGTACTTTCTTGACGGGGAAGCGATTTTGGAGACTATGTTAAGCTACTTTTCTTGGTTTACTCGGAGACAGCAGCGCAATATTCTTAAGGTTTGCCGCTTTTTGTGGACGATCTTGTCCATTGTTTTGTTCTCAAGAACCCTGTATTCCATGACACTATATTATGGCTTTGTATAACTCCTTTATATGGAAATGTCTCTTTTTTTTTTTTGAGTTTATCTTATCATAATACCATAGATCTGATCAACTGTATGAGATCATACACAATACTGGTAATATGTAAGACGGATGCTCTCCTGGTCTCCTGACAAAATTGCAGGCCAGCATTGTTACAGAACAAAGTGGCCTTAACTTTAGTGAGTTTATGATTAAAATTTAGACAATTCCCGAGCCCTCATGCTTGTAGAATATTTTGACCCAAGATATGAGTGGGTTTGTGGGTATGCACCTCACTGTTGTAAGTTAAAACGGGAATATCAAATTTCAATTGATCTCAACATGTTTCGGTGGAGATCTGTTT]

[+] EMBL AK100750             [AAGCCGTCGCCGTCGCCGCTGGAATGATCGGCGGCGTCGGCCGCAGCAGGCGGCGTGGCCGTGCGCCGCCAGTTCTGCCCTCGAGCGCCGCCGCCCGCCGCGCCGAGCACTCCGTCTCTTGCTGGTACTGTGACTGCAAAATATATTCCTTCAATGACATCATATTTAATTTGGGATGGAGATATGCTAGATGCTATTGTGGGACTCAATTGGTGCAGTTTATTTCAGTGGTCGGTCATTTAGTACCTGGCTACAAAATCTACTGGTGACTACAATTTGTCCCTTCATTTTTCAACTTCTAACATCAACCATTCAGCATGCCCTTAATCTATTGCAGGCTTCCAGCTTTGGCATATCAATAATGGACATCGCAGCAATCATAGCATCAACAGTTTTTTCTATTGCTTTTCACGAATTTGGACATGCTGTTGCAGCTGCAAGGTCCTTATTTGCTGACCTACATTTTCTACGAGATGTTCTGCATGTGTTTGCATTCATCTGCAGAAGGCATACTTTATATGTTGACTTACAATATTAACTTTCACCCGCTTACAGTATTCCTTTCGCACATTGCTGACACATTCATTGCTAAATATGCAACAGCGAGGGCATACAGATTGAGTATGTTGCGGTATTCGTAGCTGCACTTTTTCCTGGGGCATTAATTGCTCTGAACTGTGACCAGCTGCAAAATTTACCTCTTTTTTCTATGCTTCGGATTTATTGTGCAGGGATTTGGCATAATGTTATGTATTTGTGGCATGCATGCTAACCTATAGAGACCAGAAGTTGTGAATTAAAAAAAGGAGCACATTTGAGAAATGCCAGTTCGGCAGTTCTGCATTACTGCTGCAGCTTCTTATCATATTTTTGTAAGCACGTTCATTCATAATGATGTTTATTTATGATTTCATGTCTAATAGTTATGTGGAGTATGTGTCATCATGGCATTATTACTACCTGTGGTGCTGTATCCTCTCTTTGTGACTGGTGGTCTTATGATTACAGGAGTCCCAGAAGCATCTCCTCTGTCAGGATACTTGTCTGCTCACAATTTTATCCTTTCTGTGGATGGATTGAACATAACAAGAGCTGATGAATGGATGAAAATGCTTACTCAGGACAATGTAGTACAAATAAGCAGCCGTGATCTCCTTGAAGGCTCTGAAGGCTATCGTGCCACTGGTTCTAGAAAGGGTTACTGTGTTCCCAACTCATGGATGGATGCAAGCAAGAATCTTTGGCAGATAAATGACAAGCTATCTTGCCCAGATGATCTGGT AGCC  TTTCAAAGAATGAGTGAGAAAGGTATTGGCAAGAAGGAAGTTGAAGACAAATATTGTTTGATTGCAAAAGATGTTGTCAAGCTTAAAAAATGTGGAAATGGATGGCGGGGGGCCGAAGATGGCAGAAGCAACTTTGCATGTTTGGAGGATGAGTACTGTTTGGTGCCTGTTCTAGGCCCTGGGATTTCATGGATAGAGATCTCTTATGCCAGACCTTATTCTTTGGAGTGCTTACAGAAAGAAAGGAACTCATCATTGCTGCATGATGGAAATAATAACCCTGGATTGGGTCCTTGCCAGGGAACTTTTGTTTATGCGGGTGATCTGTTATCAGCAGCACATTCTATTAAGTTATCCTCTTACCGACCTCGATGGCCTCTCTTGCTTTTCATTGCAGATGTTCCTCGTATCTTGCAAGATGGTTTAAGTTGTTTATTTCGTGTGTCTGCAGCATTGGCTGTAGTCAATCGCTTACCAGTGTACTTTCTTGACGGGGAAGCGATTTTGGAGACTATGTTAAGCTACTTTTCTTGGTTTACTCGGAGACAGCAGCGCAATATTCTTAAGGTTTGCCGCTTTTTGTGGACGATCTTGTCCATTGTTTTGTTCTCAAGAACCCTGTATTCCATGACACTATATTATGGCTTTGTATAACTCCTTTATATGGAAATGTCTCTTTTTTTTTTTTGAGTTTATCTTATCATAATACCATAGATCTGATCAACTGTATGAGATCATACACAATACTGGTAATATGTAAGACGGATGCTCTCCTGGTCTCCTGACAAAATTGCAGGCCAGCATTGTTACAGAACAAAGTGGCCTTAACTTTAGTGAGTTTATGATTAAAATTTAGACAATTCCCGAGCCCTCATGCTTGTAGAATATTTTGACCCAAGATATGAGTGGGTTTGTGGGTATGCACCTCACTGTTGTAAGTTAAAACGGGAATATCAAATTTCAATTGATCTCAACATGTTTCGGTGGA         ]
[-] EMBL CA760284             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        tTGATTAGGTGAGCCCGAGACAAGGGGGGAGTGAGAAAGGTATTGGCAAGAAGGAAGTTGAAGACAAATATTGTTTGATTGCAAAAGATGTTGTCAAGCTTAAAAAATGTGGAAATGGATGGCGGGGGGCCGAAGATGGCAGAAGCAACTTTGCATGTTTGGAGGATGAGTACTGTTTGGTGCCTGTTCTAGGCCCTGGGATTTCATGGATAGAGATCTCTTATGCCAGACCTTATTCTTTGGAGTGCTTACAGAAAGAAAGGAACTTATCATTGCTGCATGATGGAAATAATAACCCTGGACTGGGTCCTTGCCAGGGAACTTTTGTTTATGCGGGTGATCTGTTATCAGCAGCACATTCTATTAAGTTATCCTCTTACCGACCTCGATGGCCTCTCTTGCTTTTCATCGCAGATGTTCCTCGTATCTTGCAAGATGGTTTAAGTTGTTTATTTCGTGTGTTTGCAGCATTGGCTGTAGTCAATTGCTTACCAGTGTACTTTCTTGACGGGGAAGCGATTTTGGAGACTATGTTAAGCTACTTTTCTTGGTTTACTCGGAGACAGCAGCGCAATATTTTTAAGGTTTGCCGCTTTTTGTGGACGATCTTGTCCATTGTTTTGTTTTCAAGAACCCct                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB621534             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGTGCCTGTTCTAGGCCCTGGGATTTCATGGATAGAGATCTCTTATGCCAGACCTTATTCTTTGGAGTGCTTACAGAAAGAAAGGAACTCATCATTGCTGCATGATGGAAATAATAACCCTGGATTGGGTCCTTGCCAGGGAACTTTTGTTTATGCGGGTGATCTGTTATCAGCAGCACATTCTATTAAGTTATCCTCTTACCGACCTCGATGGCCTCTCTTGCTTTTCATTGCAGATGTTCCTCGTATCTTGCAAGATGGTTTAAGTTGTTTATTTCGTGTGTCTGCAGCATTGGCTGTAGTCAATTGCTTACCAGTGTACTTTCTTGACGGGGAAGCGATTTTGGAGACTATGTTAAGCTACTTTTCTTGGTTTACTCGGAGACAGCAGCGCAATATTCTTAAGGTTTGCCGCTTTTTGTGGACGATCTTGTCCATTGTTTTGTTCTCAAGAACCCTGTATTCCATGACACTATATTATGGCTTTGTATAACTCCTTTATATGGAAATGTCTCTTTTTTTTTTTTGAGTTTATCTTATCATAATACCATAGATCTGATCAACTGTATGAGATCATACACAATACTGGTAATATGTAAGACGGATGCTCTCCTGGTCTCCTGACAAAATTGCAGGCCAGCATTGTTACAGAACAAAGTGGCCTTAACTTTAGTGAGTTTATGATTAAAATTTAGACAATTCCCGAGCCCTCATGCTTGTAGAATATTTTGACCCAAGATATGAGTGGGTTTGTGGGTATGCACCTCACTGTTGTAAGTTAAAACGGGAATATCAAATTTCAATTGATCTCAACATGTTTCGGTGGAGATCTGTTT]
[-] EMBL CB621603             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCTCTTATGCCAGACCTTATTCTTTGGAGTGCTTACAGAAAGAAAGGAACTCATCATTGCTGCATGATGGAAATAATAACCCTGGATTGGGTCCTTGCCAGGGAACTTTTGTTTATGCGGGTGATCTGTTATCAGCAGCACATTCTATTAAGTTATCCTCTTACCGACCTCGATGGCCTCTCTTGCTTTTCATTGCAGATGTTCCTCGTATCTTGCAAGATGGTTTAAGTTGTTTATTTCGTGTGTCTGCAGCATTGGCTGTAGTCAATTGCTTACCAGTGTACTTTCTTGACGGGGAAGCGATTTTGGAGACTATGTTAAGCTACTTTTCTTGGTTTACTCGGAGACAGCAGCGCAATATTCTTAAGGTTTGCCGCTTTTTGTGGACGATCTTGTCCATTGTTTTGTTCTCAAGAACCCTGTATTCCATGACACTATATTATGGCTTTGTATAACTCCTTTATATGGAAATGTCTCTTTTTTTTTTTTGAGTTTATCTTATCATAATACCATAGATCTGATCAACTGTATGAGATCATACACAATACTGGTAATATGTAAGACGGATGCTCTCCTGGTCTCCTGACAAAATTGCAGGCCAGCATTGTTACAGAACAAAGTGGCCTTAACTTTAGTGAGTTTATGATTAAAATTTAGACAATTCCCGAGCCCTCATGCTTGTAGAATATTTTGACCCAAGATATGAGTGGGTTTGTGGGTATGCACCTCACTGTTGTAAGTTAAAACGGGAATATCAAATTTGAATTGATCTCAACATGTTTCGGTGGAGATCTGTT ]


>consensus_8859#0 AAGCCGTCGCCGTCGCCGCTGGAATGATCGGCGGCGTCGGCCGCAGCAGGCGGCGTGGCC GTGCGCCGCCAGTTCTGCCCTCGAGCGCCGCCGCCCGCCGCGCCGAGCACTCCGTCTCTT GCTGGTACTGTGACTGCAAAATATATTCCTTCAATGACATCATATTTAATTTGGGATGGA GATATGCTAGATGCTATTGTGGGACTCAATTGGTGCAGTTTATTTCAGTGGTCGGTCATT TAGTACCTGGCTACAAAATCTACTGGTGACTACAATTTGTCCCTTCATTTTTCAACTTCT AACATCAACCATTCAGCATGCCCTTAATCTATTGCAGGCTTCCAGCTTTGGCATATCAAT AATGGACATCGCAGCAATCATAGCATCAACAGTTTTTTCTATTGCTTTTCACGAATTTGG ACATGCTGTTGCAGCTGCAAGGTCCTTATTTGCTGACCTACATTTTCTACGAGATGTTCT GCATGTGTTTGCATTCATCTGCAGAAGGCATACTTTATATGTTGACTTACAATATTAACT TTCACCCGCTTACAGTATTCCTTTCGCACATTGCTGACACATTCATTGCTAAATATGCAA CAGCGAGGGCATACAGATTGAGTATGTTGCGGTATTCGTAGCTGCACTTTTTCCTGGGGC ATTAATTGCTCTGAACTGTGACCAGCTGCAAAATTTACCTCTTTTTTCTATGCTTCGGAT TTATTGTGCAGGGATTTGGCATAATGTTATGTATTTGTGGCATGCATGCTAACCTATAGA GACCAGAAGTTGTGAATTAAAAAAAGGAGCACATTTGAGAAATGCCAGTTCGGCAGTTCT GCATTACTGCTGCAGCTTCTTATCATATTTTTGTAAGCACGTTCATTCATAATGATGTTT ATTTATGATTTCATGTCTAATAGTTATGTGGAGTATGTGTCATCATGGCATTATTACTAC CTGTGGTGCTGTATCCTCTCTTTGTGACTGGTGGTCTTATGATTACAGGAGTCCCAGAAG CATCTCCTCTGTCAGGATACTTGTCTGCTCACAATTTTATCCTTTCTGTGGATGGATTGA ACATAACAAGAGCTGATGAATGGATGAAAATGCTTACTCAGGACAATGTAGTACAAATAA GCAGCCGTGATCTCCTTGAAGGCTCTGAAGGCTATCGTGCCACTGGTTCTAGAAAGGGTT ACTGTGTTCCCAACTCATGGATGGATGCAAGCAAGAATCTTTGGCAGATAAATGACAAGC TATCTTGCCCAGATGATCTGGTAGCCTTTCAAAGAATGAGTGAGAAAGGTATTGGCAAGA AGGAAGTTGAAGACAAATATTGTTTGATTGCAAAAGATGTTGTCAAGCTTAAAAAATGTG GAAATGGATGGCGGGGGGCCGAAGATGGCAGAAGCAACTTTGCATGTTTGGAGGATGAGT ACTGTTTGGTGCCTGTTCTAGGCCCTGGGATTTCATGGATAGAGATCTCTTATGCCAGAC CTTATTCTTTGGAGTGCTTACAGAAAGAAAGGAACTCATCATTGCTGCATGATGGAAATA ATAACCCTGGATTGGGTCCTTGCCAGGGAACTTTTGTTTATGCGGGTGATCTGTTATCAG CAGCACATTCTATTAAGTTATCCTCTTACCGACCTCGATGGCCTCTCTTGCTTTTCATTG CAGATGTTCCTCGTATCTTGCAAGATGGTTTAAGTTGTTTATTTCGTGTGTCTGCAGCAT TGGCTGTAGTCAATTGCTTACCAGTGTACTTTCTTGACGGGGAAGCGATTTTGGAGACTA TGTTAAGCTACTTTTCTTGGTTTACTCGGAGACAGCAGCGCAATATTCTTAAGGTTTGCC GCTTTTTGTGGACGATCTTGTCCATTGTTTTGTTCTCAAGAACCCTGTATTCCATGACAC TATATTATGGCTTTGTATAACTCCTTTATATGGAAATGTCTCTTTTTTTTTTTTGAGTTT ATCTTATCATAATACCATAGATCTGATCAACTGTATGAGATCATACACAATACTGGTAAT ATGTAAGACGGATGCTCTCCTGGTCTCCTGACAAAATTGCAGGCCAGCATTGTTACAGAA CAAAGTGGCCTTAACTTTAGTGAGTTTATGATTAAAATTTAGACAATTCCCGAGCCCTCA TGCTTGTAGAATATTTTGACCCAAGATATGAGTGGGTTTGTGGGTATGCACCTCACTGTT GTAAGTTAAAACGGGAATATCAAATTTCAATTGATCTCAACATGTTTCGGTGGAGATCTG TTT



consensusID : consensus_8859#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 809
fasta sequence
                              [GCCGCTGGAATGATCGGCGGCGTCGGCCGCAGCAGGCGGCGTGGCCGTGCGCCGCCAGTTCTGCCCTCGAGCGCCGCCGCCCGCCGCGCCGAGCACTCCGTCTCTTGCTGGTACTGTGACTGCAAAATATATTCCTTCAATGACATCATATTTAATTTGGGATGGAGATATGCTAGATACATGAGAGCATGGTTTTCTGCAGGGGTTTATTTCTCTGTTGTTGCTTTAGTTGGAATATCAGTGATGCTATTGTGGGACTCAATTGGTGCAGTTTATTTCAGTGGTCGGTCATTTAGTACCTGGCTACAAAATCTACTGGTGACTACAATTTGTCCCTTCATTTTTCAACTTCTAACATCAACCATTCAGCATGCCCTTAATCTATTGCAGGCTTCCAGCTTTGGCATATCAATAATGGACATCGCAGCAATCATAGCATCAACAGTTTTTTCTATTGCTTTTCACGAATTTGGACATGCTGTTGCAGCTGCAAGGTCCTTATTTGCTGACCTACATTTTCTACGAGATGTTCTGCATGTGTTTGCATTCATTTGCAGAAGGCATACTTTATATGTTGACTTACAATATTAACTTTCACCCGCTTACAGTATTCCTTTCGCACATTGCTGACACATTCATTGCTAAATATGCAACAGCGAGGGCATACAGATTGAGTATGTTGCGGTATTCGTAGCTGCACTTTTTCCTGGGGCATTAATTGCTCTGAACTGTGACCAGCTGCAAAATTTACCTCTTTTTTCTATGCTTCGGATTTATTGTGCAGGGATTTGGCATAATGGTATGGTAAG]

[+] EMBL CB621602             [GCCGCTGGAATGATCGGCGGCGTCGGCCGCAGCAGGCGGCGTGGCCGTGCGCCGCCAGTTCTGCCCTCGAGCGCCGCCGCCCGCCGCGCCGAGCACTCCGTCTCTTGCTGGTACTGTGACTGCAAAATATATTCCTTCAATGACATCATATTTAATTTGGGATGGAGATATGCTAGATACATGAGAGCATGGTTTTCTGCAGGGGTTTATTTCTCTGTTGTTGCTTTAGTTGGAATATCAGTGATGCTATTGTGGGACTCAATTGGTGCAGTTTATTTCAGTGGTCGGTCATTTAGTACCTGGCTACAAAATCTACTGGTGACTACAATTTGTCCCTTCATTTTTCAACTTCTAACATCAACCATTCAGCATGCCCTTAATCTATTGCAGGCTTCCAGCTTTGGCATATCAATAATGGACATCGCAGCAATCATAGCATCAACAGTTTTTTCTATTGCTTTTCACGAATTTGGACATGCTGTTGCAGCTGCAAGGTCCTTATTTGCTGACCTACATTTTCTACGAGATGTTCTGCATGTGTTTGCATTCATTTGCAGAAGGCATACTTTATATGTTGACTTACAATATTAACTTTCACCCGCTTACAGTATTCCTTTCGCACATTGCTGACACATTCATTGCTAAATATGCAACAGCGAGGGCATACAGATTGAGTATGTTGCGGTATTCGTAGCTGCACTTTTTCCTGGGGCATTAATTGCTCTGAACTGTGACCAGCTGCAAAATTTACCTCTTTTTTCTATGCTTCGGATTTATTGTGCAGGGATTTGGCATAATGGTATGGTAAG]
[+] EMBL CB621533             [GCCCCTTTAATGATCGGCGGCGTCGGCCGCAGCAGGCGGCGTGGCCGTGCGCCGCCAGTTCTGCCCTCGAGCGCCGCCGCCCGCCGCGCCGAGCACTCCGTCTCTTGCTGGTACTGTGACTGCAAAATATATTCCTTCAATGACATCATATTTAATTTGGGATGGAGATATGCTAGATACATGAGAGCATGGTTTTCTGCAGGGGTTTATTTCTCTGTTGTTGCTTTAGTTGGAATATCAGTGATGCTATTGTGGGACTCAATTGGTGCAGTTTATTTCAGTGGTCGGTCATTTAGTACCTGGCTACAAAATCTACTGGTGACTACAATTTGTCCCTTCATTTTTCAACTTCTAACATCAACCATTCAGCATGCCCTTAATCTATTGCAGGCTTCCAGCTTTGGCATATCAATAATGGACATCGCAGCAATCATAGCATCAACAGTTTTTTCTATTGCTTTTCACGAATTTGGACATGCTGTTGCAGCTGCAAGGTCCTTATTTGCTGACCTACATTTTCTACGAGATGTTCTGCATGTGTTTGCATTCATTTGCAGAAGGCATACTTTATATGTTGACTTACAATATTAACTTTCACCCGCTTACAGTATTCCTTTCGCACATTGCTGACACATTCATTGCTAAATATGCAACAGCGAGGGCATACAGATTGAGTATGTTGCGGTATTCGTAGCTGCACTTTTTCCTGGGGCATTAATTGCTCTGAACTGTGACCAGCTGCAAAATTTACCTCTT                                                     ]


>consensus_8859#1 GCCGCTGGAATGATCGGCGGCGTCGGCCGCAGCAGGCGGCGTGGCCGTGCGCCGCCAGTT CTGCCCTCGAGCGCCGCCGCCCGCCGCGCCGAGCACTCCGTCTCTTGCTGGTACTGTGAC TGCAAAATATATTCCTTCAATGACATCATATTTAATTTGGGATGGAGATATGCTAGATAC ATGAGAGCATGGTTTTCTGCAGGGGTTTATTTCTCTGTTGTTGCTTTAGTTGGAATATCA GTGATGCTATTGTGGGACTCAATTGGTGCAGTTTATTTCAGTGGTCGGTCATTTAGTACC TGGCTACAAAATCTACTGGTGACTACAATTTGTCCCTTCATTTTTCAACTTCTAACATCA ACCATTCAGCATGCCCTTAATCTATTGCAGGCTTCCAGCTTTGGCATATCAATAATGGAC ATCGCAGCAATCATAGCATCAACAGTTTTTTCTATTGCTTTTCACGAATTTGGACATGCT GTTGCAGCTGCAAGGTCCTTATTTGCTGACCTACATTTTCTACGAGATGTTCTGCATGTG TTTGCATTCATTTGCAGAAGGCATACTTTATATGTTGACTTACAATATTAACTTTCACCC GCTTACAGTATTCCTTTCGCACATTGCTGACACATTCATTGCTAAATATGCAACAGCGAG GGCATACAGATTGAGTATGTTGCGGTATTCGTAGCTGCACTTTTTCCTGGGGCATTAATT GCTCTGAACTGTGACCAGCTGCAAAATTTACCTCTTTTTTCTATGCTTCGGATTTATTGT GCAGGGATTTGGCATAATGGTATGGTAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8859#0      AAGCCGTCGCCGTCGCCGCTGGAATGATCGGCGGCGTCGGCCGCAGCAGGCGGCGTGGCC 60
consensus_8859#1      --------------GCCGCTGGAATGATCGGCGGCGTCGGCCGCAGCAGGCGGCGTGGCC 46
                                    **********************************************

consensus_8859#0      GTGCGCCGCCAGTTCTGCCCTCGAGCGCCGCCGCCCGCCGCGCCGAGCACTCCGTCTCTT 120
consensus_8859#1      GTGCGCCGCCAGTTCTGCCCTCGAGCGCCGCCGCCCGCCGCGCCGAGCACTCCGTCTCTT 106
                      ************************************************************

consensus_8859#0      GCTGGTACTGTGACTGCAAAATATATTCCTTCAATGACATCATATTTAATTTGGGATGGA 180
consensus_8859#1      GCTGGTACTGTGACTGCAAAATATATTCCTTCAATGACATCATATTTAATTTGGGATGGA 166
                      ************************************************************

consensus_8859#0      GATATGCTAGAT------------------------------------------------ 192
consensus_8859#1      GATATGCTAGATACATGAGAGCATGGTTTTCTGCAGGGGTTTATTTCTCTGTTGTTGCTT 226
                      ************                                                

consensus_8859#0      -------------------GCTATTGTGGGACTCAATTGGTGCAGTTTATTTCAGTGGTC 233
consensus_8859#1      TAGTTGGAATATCAGTGATGCTATTGTGGGACTCAATTGGTGCAGTTTATTTCAGTGGTC 286
                                         *****************************************

consensus_8859#0      GGTCATTTAGTACCTGGCTACAAAATCTACTGGTGACTACAATTTGTCCCTTCATTTTTC 293
consensus_8859#1      GGTCATTTAGTACCTGGCTACAAAATCTACTGGTGACTACAATTTGTCCCTTCATTTTTC 346
                      ************************************************************

consensus_8859#0      AACTTCTAACATCAACCATTCAGCATGCCCTTAATCTATTGCAGGCTTCCAGCTTTGGCA 353
consensus_8859#1      AACTTCTAACATCAACCATTCAGCATGCCCTTAATCTATTGCAGGCTTCCAGCTTTGGCA 406
                      ************************************************************

consensus_8859#0      TATCAATAATGGACATCGCAGCAATCATAGCATCAACAGTTTTTTCTATTGCTTTTCACG 413
consensus_8859#1      TATCAATAATGGACATCGCAGCAATCATAGCATCAACAGTTTTTTCTATTGCTTTTCACG 466
                      ************************************************************

consensus_8859#0      AATTTGGACATGCTGTTGCAGCTGCAAGGTCCTTATTTGCTGACCTACATTTTCTACGAG 473
consensus_8859#1      AATTTGGACATGCTGTTGCAGCTGCAAGGTCCTTATTTGCTGACCTACATTTTCTACGAG 526
                      ************************************************************

consensus_8859#0      ATGTTCTGCATGTGTTTGCATTCATCTGCAGAAGGCATACTTTATATGTTGACTTACAAT 533
consensus_8859#1      ATGTTCTGCATGTGTTTGCATTCATTTGCAGAAGGCATACTTTATATGTTGACTTACAAT 586
                      ************************* **********************************

consensus_8859#0      ATTAACTTTCACCCGCTTACAGTATTCCTTTCGCACATTGCTGACACATTCATTGCTAAA 593
consensus_8859#1      ATTAACTTTCACCCGCTTACAGTATTCCTTTCGCACATTGCTGACACATTCATTGCTAAA 646
                      ************************************************************

consensus_8859#0      TATGCAACAGCGAGGGCATACAGATTGAGTATGTTGCGGTATTCGTAGCTGCACTTTTTC 653
consensus_8859#1      TATGCAACAGCGAGGGCATACAGATTGAGTATGTTGCGGTATTCGTAGCTGCACTTTTTC 706
                      ************************************************************

consensus_8859#0      CTGGGGCATTAATTGCTCTGAACTGTGACCAGCTGCAAAATTTACCTCTTTTTTCTATGC 713
consensus_8859#1      CTGGGGCATTAATTGCTCTGAACTGTGACCAGCTGCAAAATTTACCTCTTTTTTCTATGC 766
                      ************************************************************

consensus_8859#0      TTCGGATTTATTGTGCAGGGATTTGGCATAATGTTATGTATTTGTGGCATGCATGCTAAC 773
consensus_8859#1      TTCGGATTTATTGTGCAGGGATTTGGCATAATGGTATG-GTAAG---------------- 809
                      ********************************* ****  *  *                

consensus_8859#0      CTATAGAGACCAGAAGTTGTGAATTAAAAAAAGGAGCACATTTGAGAAATGCCAGTTCGG 833
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      CAGTTCTGCATTACTGCTGCAGCTTCTTATCATATTTTTGTAAGCACGTTCATTCATAAT 893
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      GATGTTTATTTATGATTTCATGTCTAATAGTTATGTGGAGTATGTGTCATCATGGCATTA 953
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      TTACTACCTGTGGTGCTGTATCCTCTCTTTGTGACTGGTGGTCTTATGATTACAGGAGTC 1013
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      CCAGAAGCATCTCCTCTGTCAGGATACTTGTCTGCTCACAATTTTATCCTTTCTGTGGAT 1073
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      GGATTGAACATAACAAGAGCTGATGAATGGATGAAAATGCTTACTCAGGACAATGTAGTA 1133
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      CAAATAAGCAGCCGTGATCTCCTTGAAGGCTCTGAAGGCTATCGTGCCACTGGTTCTAGA 1193
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      AAGGGTTACTGTGTTCCCAACTCATGGATGGATGCAAGCAAGAATCTTTGGCAGATAAAT 1253
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      GACAAGCTATCTTGCCCAGATGATCTGGTAGCCTTTCAAAGAATGAGTGAGAAAGGTATT 1313
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      GGCAAGAAGGAAGTTGAAGACAAATATTGTTTGATTGCAAAAGATGTTGTCAAGCTTAAA 1373
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      AAATGTGGAAATGGATGGCGGGGGGCCGAAGATGGCAGAAGCAACTTTGCATGTTTGGAG 1433
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      GATGAGTACTGTTTGGTGCCTGTTCTAGGCCCTGGGATTTCATGGATAGAGATCTCTTAT 1493
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      GCCAGACCTTATTCTTTGGAGTGCTTACAGAAAGAAAGGAACTCATCATTGCTGCATGAT 1553
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      GGAAATAATAACCCTGGATTGGGTCCTTGCCAGGGAACTTTTGTTTATGCGGGTGATCTG 1613
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      TTATCAGCAGCACATTCTATTAAGTTATCCTCTTACCGACCTCGATGGCCTCTCTTGCTT 1673
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      TTCATTGCAGATGTTCCTCGTATCTTGCAAGATGGTTTAAGTTGTTTATTTCGTGTGTCT 1733
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      GCAGCATTGGCTGTAGTCAATTGCTTACCAGTGTACTTTCTTGACGGGGAAGCGATTTTG 1793
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      GAGACTATGTTAAGCTACTTTTCTTGGTTTACTCGGAGACAGCAGCGCAATATTCTTAAG 1853
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      GTTTGCCGCTTTTTGTGGACGATCTTGTCCATTGTTTTGTTCTCAAGAACCCTGTATTCC 1913
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      ATGACACTATATTATGGCTTTGTATAACTCCTTTATATGGAAATGTCTCTTTTTTTTTTT 1973
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      TGAGTTTATCTTATCATAATACCATAGATCTGATCAACTGTATGAGATCATACACAATAC 2033
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      TGGTAATATGTAAGACGGATGCTCTCCTGGTCTCCTGACAAAATTGCAGGCCAGCATTGT 2093
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      TACAGAACAAAGTGGCCTTAACTTTAGTGAGTTTATGATTAAAATTTAGACAATTCCCGA 2153
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      GCCCTCATGCTTGTAGAATATTTTGACCCAAGATATGAGTGGGTTTGTGGGTATGCACCT 2213
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      CACTGTTGTAAGTTAAAACGGGAATATCAAATTTCAATTGATCTCAACATGTTTCGGTGG 2273
consensus_8859#1      ------------------------------------------------------------
                                                                                  

consensus_8859#0      AGATCTGTTT 2283
consensus_8859#1      ----------
                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)