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Oryza sativa
cluster # 8881 cluster # 8881       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8881#0 length = 2796 sequences # 4  
consensus_8881#1 length = 486 sequences # 2  

consensusID : consensus_8881#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2796
fasta sequence
                              [TCTACACGCGTCGTTGTCTCGTCCTGGGACTGTGAGGTGCCTCGCTCTTGCGCCGCCGCTGCGGAGAGGGGTGGTCGCCGGGAGAAGGAAGGAAGGCGCTACATGGCGCCAACTCTAACGGATCCGGATGGTGTTCCTCGATGGGATCGGAGGAAAGGGCGGCAGCCCTCCAGGTTTTTGTGCGTCCCATTCGACACCGATTTCTTCTTTTTACGGAGAATCATCCGATCCATTTCCTAGGTTTTCCTAGGTTGGGGTAGTATATTTGTTTTCTGTAATCCTTGATCTAATCAAGTAGCCGCAGTAATTCTTATGCGATGTTATCTAATTTTCCCCTATCCGCTTTCTGATTGGCACCATAGTACATTTGTTTTTACCCTTGACTAAATTACAGTTCAGAGTCTAGTTCAGTTTCATTGTTCTTTTGTTCAAAGGGTATTCGTTCAAATAAGCTCTATATATTGCTTGAGTGGGAAAGGAAAGGTTTTAATTCAGAAAGTAATCTATTCATGTTTAAATTTTGGCCACCCGTATATTTTCTGAAAAAAAAAATGAATACATAAAGGATGTCGTATTATTAAAGTGTGTTGTGTGACTTGTGTCCTAAATATAAGCATCGAGCTCTCGTTCATCGTATTCTAACCATTTAAAAATCATTAGTGGTCAAAGTTGAAATAGTGCTTGTCAACAGTGACTGGAATTTGGGAGACCTTGTGTACACTTTTAACCTTTTTTATACTGCATAGCGATTCATCATAAGTTTGTTCTGTACTATGTCCATTTGTTCATGTAAAAATGTAGATGAACTCAAAAGGAAAAGGTACCTCATACGGTACTCGCACTCTACAACATCAGCTTCTGCATCCTCAACATTTACATTGCTCAAATCGACACTAATCAGAAAATAATCTTGTTGAAGAAGAGGTTTCATTAGATTTCAGCTAGCCATGGTCAAACTAAGAGATGTGGTTAACTCTTCCTTCGAGTACTAGTTGTAAATCGCTCAACTAATCTGTAAGCTATGCTAGTCGTACATCAAGTATCTGTGCAGGTGCTAGGTAATCAGATCAAGCCTTTGCTGCAGTATCAACTTTTACTACTAATGGCATCATCAGTCGAGCATCCTTTCCATGCCACAACAAGGAACCAAATACATGATCCCGTTGAGGCACATCCACATGGAAGTTAACCGTGAAAGTCTTCTTCGCACCGTAATTCTCGAAGACTAGAACTTTTGGAGTCACCGTGACATTGATACCCAGTGGAGCAGACACGAAAGCATGAAGGAGACCATGATGGATATGCACCTTTGACAAGAGCAGCTATTCCTGTAACATGGGGGCACGCCATGGAAGTTCCAGAAAGGATGTTGAAGTGCTTGTCCTCCTTAGCAGGAGACCATGCCGCCAATATGTTCAACCCGGGAGCAGCAATATCTGGCTACAGAATGCATAAGTGTCTTGTAAACACATCAATAAACTTTTGACTGGTAGCTTCGTTTTTCAATTCCGATTACCTTCAGAATCTCCGGTGTCAATGAATTTGGGCCTCTTGAAGAGAAGGCCGCCACCCGGGGAGCATCTCTAGAACCTAAAATCGTCTTCGCTGGTGAAATTTGATGGTGAGTTTGCCTCTCCCCGCTGGCATTGCCCTCTCCATCTTGTAGGAACCGGAGGCATTCCATGATCTCTGAAACTAGGAGATTCTGGCCATATTCCTGGGGGGAACAGAGGCACAAGGTAGCTCAGCCGCTGCATCGACGGACAAGCCCATGAAATCCCATGAATGAGTGGTGTGGAGGCTCCTCTTTGTGTTTGGGAACACTGAGATGACACCAGGCATATCTGCAGAAGTGTGCAGCAGAGTTAGCTTTCAGTCATCATCACACCAGGATCACGTGTCAGGATGCTAAAGACATCAGAAGCCATGCATATACAAGGAAATTACTGGCTAATTTCATGGCTTGTTGTTTGTTCAGCTTTGCTGCAAATCCTTGGAAACCGTTGCTGTAAGTGTAGACATGCGATGCCTCTGCCTTCTCCATGCTGAGACCAAGCATCCAATTAGTCAAGCTACAGAACAAGTATGGAAGCTAGATTGATAGATATCAACAGCTGATGATGAACTCATTCCAAACCTTCCGTCATGAACAGCTGTCAGCATCTGGTGATGAAGCCTCAGCATGTCATGCCGATTCTCAGTGCTGCCTTGCAATCCTTTGCCCATGTAGACCACATAAACCTGAAATATAAGCATCCATCAAGGAAATGTTAGATCACTGGGAAGAGATCAAGAAAGAAGATAAAGCCATGATTGCAGAAGAGTGAGTAGTACGGAATGAATGCAAGAAAGCTTGTGCATGGTAGGAGGTGGACTACTGAAACCAACCTGAGCACAAGAGCAAGAGGAGCAGAACTCTCCTAGTAACACCACAAACACATAGAACACGAGGAAGATCATATTGTCTCTGTCCTGCAAAGAAGCAATCACATACACCCAAACATGCAGATATAGGCAGACAGTGAGGTTTTGGAATGGAAGCCTGCAAGCTGCAAACGTACATATGACCAAATTTTTTTTATGGACGAGTAGTATGCTTTGTGGAACTGACAAGCCACAGCACTACTCCCTCAGTCCCAAAATAAGTGCAGTTTTGCACTGTTCATGTTCAACTTTTGATCATTCGTCTTATTTGAAATTTTTTTATGATTAATATTTTTATTGTTATTGGATGATAAAACATGAATAGTACTTTATGTGTGACTAATTTTTTTTAAAAAAAAAAAAAAAAATAAA]

[+] EMBL AK069810             [TCTACACGCGTCGTTGTCTCGTCCTGGGACTGTGAGGTGCCTCGCTCTTGCGCCGCCGCTGCGGAGAGGGGTGGTCGCCGGGAGAAGGAAGGAAGGCGCTACATGGCGCCAACTCTAACGGATCCGGATGGTGTTCCTCGATGGGATCGGAGGAAAGGGCGGCAGCCCTCCAGGTTTTTGTGCGTCCCATTCGACACCGATTTCTTCTTTTTACGGAGAATCATCCGATCCATTTCCTAGGTTTTCCTAGGTTGGGGTAGTATATTTGTTTTCTGTAATCCTTGATCTAATCAAGTAGCCGCAGTAATTCTTATGCGATGTTATCTAATTTTCCCCTATCCGCTTTCTGATTGGCACCATAGTACATTTGTTTTTACCCTTGACTAAATTACAGTTCAGAGTCTAGTTCAGTTTCATTGTTCTTTTGTTCAAAGGGTATTCGTTCAAATAAGCTCTATATATTGCTTGAGTGGGAAAGGAAAGGTTTTAATTCAGAAAGTAATCTATTCATGTTTAAATTTTGGCCACCCGTATATTTTCTGAAAAAAAAAATGAATACATAAAGGATGTCGTATTATTAAAGTGTGTTGTGTGACTTGTGTCCTAAATATAAGCATCGAGCTCTCGTTCATCGTATTCTAACCATTTAAAAATCATTAGTGGTCAAAGTTGAAATAGTGCTTGTCAACAGTGACTGGAATTTGGGAGACCTTGTGTACACTTTTAACCTTTTTTATACTGCATAGCGATTCATCATAAGTTTGTTCTGTACTATGTCCATTTGTTCATGTAAAAATGTAGATGAACTCAAAAGGAAAAGGTACCTCATACGGTACTCGCACTCTACAACATCAGCTTCTGCATCCTCAACATTTACATTGCTCAAATCGACACTAATCAGAAAATAATCTTGTTGAAGAAGAGGTTTCATTAGATTTCAGCTAGCCATGGTCAAACTAAGAGATGTGGTTAACTCTTCCTTCGAGTACTAGTTGTAAATCGCTCAACTAATCTGTAAGCTATGCTAGTCGTACATCAAGTATCTGTGCAGGTGCTAGGTAATCAGATCAAGCCTTTGCTGCAGTATCAACTTTTACTACTAATGGCATCATCAGTCGAGCATCCTTTCCATGCCACAACAAGGAACCAAATACATGATCCCGTTGAGGCACATCCACATGGAAGTTAACCGTGAAAGTCTTCTTCGCACCGTAATTCTCGAAGACTAGAACTTTTGGAGTCACCGTGACATTGATACCCAGTGGAGCAGACACGAAAGCATGAAGGAGACCATGATGGATATGCACCTTTGACAAGAGCAGCTATTCCTGTAACATGGGGGCACGCCATGGAAGTTCCAGAAAGGATGTTGAAGTGCTTGTCCTCCTTAGCAGGAGACCATGCCGCCAATATGTTCAACCCGGGAGCAGCAATATCTGGCTACAGAATGCATAAGTGTCTTGTAAACACATCAATAAACTTTTGACTGGTAGCTTCGTTTTTCAATTCCGATTACCTTCAGAATCTCCGGTGTCAATGAATTTGGGCCTCTTGAAGAGAAGGCCGCCACCCGGGGAGCATCTCTAGAACCTAAAATCGTCTTCGCTGGTGAAATTTGATGGTGAGTTTGCCTCTCCCCGCTGGCATTGCCCTCTCCATCTTGTAGGAACCGGAGGCATTCCATGATCTCTGAAACTAGGAGATTCTGGCCATATTCCTGGGGGGAACAGAGGCACAAGGTAGCTCAGCCGCTGCATCGACGGACAAGCCCATGAAATCCCATGAATGAGTGGTGTGGAGGCTCCTCTTTGTGTTTGGGAACACTGAGATGACACCAGGCATATCTGCAGAAGTGTGCAGCAGAGTTAGCTTTCAGTCATCATCACACCAGGATCACGTGTCAGGATGCTAAAGACATCAGAAGCCATGCATATACAAGGAAATTACTGGCTAATTTCATGGCTTGTTGTTTGTTCAGCTTTGCTGCAAATCCTTGGAAACCGTTGCTGTAAGTGTAGACATGCGATGCCTCTGCCTTCTCCATGCTGAGACCAAGCATCCAATTAGTCAAGCTACAGAACAAGTATGGAAGCTAGATTGATAGATATCAACAGCTGATGATGAACTCATTCCAAACCTTCCGTCATGAACAGCTGTCAGCATCTGGTGATGAAGCCTCAGCATGTCATGCCGATTCTCAGTGCTGCCTTGCAATCCTTTGCCCATGTAGACCACATAAACCTGAAATATAAGCATCCATCAAGGAAATGTTAGATCACTGGGAAGAGATCAAGAAAGAAGATAAAGCCATGATTGCAGAAGAGTGAGTAGTACGGAATGAATGCAAGAAAGCTTGTGCATGGTAGGAGGTGGACTACTGAAACCAACCTGAGCACAAGAGCAAGAGGAGCAGAACTCTCCTAGTAACACCACAAACACATAGAACACGAGGAAGATCATATTGTCTCTGTCCTGCAAAGAAGCAATCACATACACCCAAACATGCAGATATAGGCAGACAGTGAGGTTTTGGAATGGAAGCCTGCAAGCTGCAAACGTACATATGACCAAATTTTTTTTATGGACGAGTAGTATGCTTTGTGGAACTGACAAGCCACAGCACTACTCCCTCAGTCCCAAAATAAGTGCAGTTTTGCACTGTTCATGTTCAACTTTTGATCATTCGTCTTATTTGAAATTTTTTTATGATTAATATTTTTATTG                                                                        ]
[+] EMBL AU062842             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCCGCTGCATCGACGGACAAGCCCATGAAATCCCATGAATGAGTGGTGTGGAGGCTCCTCTTTGTGTTTGGGAACACTGAGATGACACCAGGCATATCTGCAGAAGTGTGCAGCAGAGTTAGCTTTCAGTCATCATCACACCAGGATCACGTGTCAGGATGCTAAAGACATCAGAAGCCATGCATATACAAGGAAATTACTGGCTAATTTCATGGCTTGTTGTTTGTTCAGCTTTGCTGCAAATCCTTGGAAACCGTTGCTGTAAGTGTAGACATGCGATGCCTCTGCCTTCTCCATGCTGAGACCAAGCATCCAATTAGTCAAGCTACAGAACAAGTATGGAAGCTAGATTGATAGATATCAACAGCTGATGATGAACTCATTCCAAACCTTCCGTCATGAACAGCTGTCAGCATCTGGTGATGAAGCCTCAGCATGTCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CA760931             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     aGAGGACGAGA CAAGGGGAGCAGAACTCTCCTAGTAACACCACAAACACATAGAACACGAGGAAGATCATATTGTCTCTGTCCTGCAAAGAAGCAATCACATACACCCAAACATGCAGATATAGGCAGACAGTGAGGTTTTGGAATGGAAGCCTGCAAGCCGCAAACGTACATATGACCAAATTTTTTTTATGGACGAGTAGTATGCTTCGTGGAACTGACAAGCCACAGCACTACTCCCTTAGTCCCAAAATAAGTGCAGTTTTGCACTGTTCATGTTCAACTTTTGACTATTCGTCTTATTTGAAATTTTTTTATGATTAATATTTTTATTGTTATTGGATGATAAAACATGAATAGTACTTTATGTGTGACTAATTTTTTTTAAAAAAAAAAAAAAAAATAAA]
[+] EMBL CF329208             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TAACACCACAAACACATAGAACACGAGGAAGAT ATATTGTCTCTGTCCTGCAAAGAAGCAATCACATACACCCAAACATGCAGATATAGGCAGACAGTGAGGTTTTGGAATGGAAGCCTGCAAGCTGCAAACGTACATATGACCAAATTTTTTTTATGGACGAGTAGTATGCTTTGTGGAACTGACAAGCCACAGCACTACTCCCTCAGTCCCAAAATAAGTGCAGTTTTGCACTGTTCATGTTCAACTTTTGATCATTCGTCTTATTTGAAATTTTTTTATGATTAATATTTTTATTGTTATTGGATGATAAAACATGAATAGT                                              ]


>consensus_8881#0 TCTACACGCGTCGTTGTCTCGTCCTGGGACTGTGAGGTGCCTCGCTCTTGCGCCGCCGCT GCGGAGAGGGGTGGTCGCCGGGAGAAGGAAGGAAGGCGCTACATGGCGCCAACTCTAACG GATCCGGATGGTGTTCCTCGATGGGATCGGAGGAAAGGGCGGCAGCCCTCCAGGTTTTTG TGCGTCCCATTCGACACCGATTTCTTCTTTTTACGGAGAATCATCCGATCCATTTCCTAG GTTTTCCTAGGTTGGGGTAGTATATTTGTTTTCTGTAATCCTTGATCTAATCAAGTAGCC GCAGTAATTCTTATGCGATGTTATCTAATTTTCCCCTATCCGCTTTCTGATTGGCACCAT AGTACATTTGTTTTTACCCTTGACTAAATTACAGTTCAGAGTCTAGTTCAGTTTCATTGT TCTTTTGTTCAAAGGGTATTCGTTCAAATAAGCTCTATATATTGCTTGAGTGGGAAAGGA AAGGTTTTAATTCAGAAAGTAATCTATTCATGTTTAAATTTTGGCCACCCGTATATTTTC TGAAAAAAAAAATGAATACATAAAGGATGTCGTATTATTAAAGTGTGTTGTGTGACTTGT GTCCTAAATATAAGCATCGAGCTCTCGTTCATCGTATTCTAACCATTTAAAAATCATTAG TGGTCAAAGTTGAAATAGTGCTTGTCAACAGTGACTGGAATTTGGGAGACCTTGTGTACA CTTTTAACCTTTTTTATACTGCATAGCGATTCATCATAAGTTTGTTCTGTACTATGTCCA TTTGTTCATGTAAAAATGTAGATGAACTCAAAAGGAAAAGGTACCTCATACGGTACTCGC ACTCTACAACATCAGCTTCTGCATCCTCAACATTTACATTGCTCAAATCGACACTAATCA GAAAATAATCTTGTTGAAGAAGAGGTTTCATTAGATTTCAGCTAGCCATGGTCAAACTAA GAGATGTGGTTAACTCTTCCTTCGAGTACTAGTTGTAAATCGCTCAACTAATCTGTAAGC TATGCTAGTCGTACATCAAGTATCTGTGCAGGTGCTAGGTAATCAGATCAAGCCTTTGCT GCAGTATCAACTTTTACTACTAATGGCATCATCAGTCGAGCATCCTTTCCATGCCACAAC AAGGAACCAAATACATGATCCCGTTGAGGCACATCCACATGGAAGTTAACCGTGAAAGTC TTCTTCGCACCGTAATTCTCGAAGACTAGAACTTTTGGAGTCACCGTGACATTGATACCC AGTGGAGCAGACACGAAAGCATGAAGGAGACCATGATGGATATGCACCTTTGACAAGAGC AGCTATTCCTGTAACATGGGGGCACGCCATGGAAGTTCCAGAAAGGATGTTGAAGTGCTT GTCCTCCTTAGCAGGAGACCATGCCGCCAATATGTTCAACCCGGGAGCAGCAATATCTGG CTACAGAATGCATAAGTGTCTTGTAAACACATCAATAAACTTTTGACTGGTAGCTTCGTT TTTCAATTCCGATTACCTTCAGAATCTCCGGTGTCAATGAATTTGGGCCTCTTGAAGAGA AGGCCGCCACCCGGGGAGCATCTCTAGAACCTAAAATCGTCTTCGCTGGTGAAATTTGAT GGTGAGTTTGCCTCTCCCCGCTGGCATTGCCCTCTCCATCTTGTAGGAACCGGAGGCATT CCATGATCTCTGAAACTAGGAGATTCTGGCCATATTCCTGGGGGGAACAGAGGCACAAGG TAGCTCAGCCGCTGCATCGACGGACAAGCCCATGAAATCCCATGAATGAGTGGTGTGGAG GCTCCTCTTTGTGTTTGGGAACACTGAGATGACACCAGGCATATCTGCAGAAGTGTGCAG CAGAGTTAGCTTTCAGTCATCATCACACCAGGATCACGTGTCAGGATGCTAAAGACATCA GAAGCCATGCATATACAAGGAAATTACTGGCTAATTTCATGGCTTGTTGTTTGTTCAGCT TTGCTGCAAATCCTTGGAAACCGTTGCTGTAAGTGTAGACATGCGATGCCTCTGCCTTCT CCATGCTGAGACCAAGCATCCAATTAGTCAAGCTACAGAACAAGTATGGAAGCTAGATTG ATAGATATCAACAGCTGATGATGAACTCATTCCAAACCTTCCGTCATGAACAGCTGTCAG CATCTGGTGATGAAGCCTCAGCATGTCATGCCGATTCTCAGTGCTGCCTTGCAATCCTTT GCCCATGTAGACCACATAAACCTGAAATATAAGCATCCATCAAGGAAATGTTAGATCACT GGGAAGAGATCAAGAAAGAAGATAAAGCCATGATTGCAGAAGAGTGAGTAGTACGGAATG AATGCAAGAAAGCTTGTGCATGGTAGGAGGTGGACTACTGAAACCAACCTGAGCACAAGA GCAAGAGGAGCAGAACTCTCCTAGTAACACCACAAACACATAGAACACGAGGAAGATCAT ATTGTCTCTGTCCTGCAAAGAAGCAATCACATACACCCAAACATGCAGATATAGGCAGAC AGTGAGGTTTTGGAATGGAAGCCTGCAAGCTGCAAACGTACATATGACCAAATTTTTTTT ATGGACGAGTAGTATGCTTTGTGGAACTGACAAGCCACAGCACTACTCCCTCAGTCCCAA AATAAGTGCAGTTTTGCACTGTTCATGTTCAACTTTTGATCATTCGTCTTATTTGAAATT TTTTTATGATTAATATTTTTATTGTTATTGGATGATAAAACATGAATAGTACTTTATGTG TGACTAATTTTTTTTAAAAAAAAAAAAAAAAATAAA



consensusID : consensus_8881#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 486
fasta sequence
                              [TCACTGGGAAGAGATCAAGATAAGAACGATAAAGCCATGATTGCAGAAGACGTGATTAGTACGGAATGAATGCTAGAAAGCTTGTGCATGGTAGGAGGTGGACTACTGAAACCAACCTGAGCACAAGAGCAAGAGGAGCAGAACTCTCCTAGTAACNCCNCTAACACATAGAACACGAGGAAGATCATATTGTCTCTGTCCTGCAAAGAAGCAATCACATACA-CCCAACATGCAGATATAGGCAGACAGTGAGGTTTTGGAATGGAAGCCTGCAAGCTGCAAACGTACATATGACCCAATTTTT-TTTATGGACGAGTAGTATGCTTCGTGGAACTGACAAGCCACAGCACTACTCCCTTAGTCCCCAAATAAGTGCAGTTTTGCCCTGTTCATGTTCAACTTTTGACTATTCGTCTTA-TTTGAAATTTTTTTATGATTAATATTTTTATTGTTATTGGATGATAAAACATGAATATAAAAAAAAAA]

[+] EMBL BM419764             [TCACTGGGAAGAGATCAAGATAAGAACGATAAAGCCATGATTGCAGAAGACGTGATTAGTACGGAATGAATGCTAGAAAGCTTGTGCATGGTAGGAGGTGGACTACTGAAACCAACCTGAGCACAAGAGCAAGAGGAGCAGAACTCTCCTAGTAACNCCNCTAACACATAGAACACGAGGAAGATCATATTGTCTCTGTCCTGCAAAGAAGCAATCACATACA CCCAACATGCAGATATAGGCAGACAGTGAGGTTTTGGAATGGAAGCCTGCAAGCTGCAAACGTACATATGACCCAATTTTT TTTATGGACGAGTAGTATGCTTCGTGGAACTGACAAGCCACAGCACTACTCCCTTAGTCCCCAAATAAGTGCAGTTTTGCCCTGTTCATGTTCAACTTTTGACTATTCGTCTTA TTTGAAATTTTTTTATGATTAATATTTTTATTGTTATTGGATGATAAAACATGAATATAAAAAAAAAA]
[+] EMBL BM419980             [                                                                                                                                                                                                               GAAGCAATCACATACACCCCAACATGCAGATATAGGCAGACAGTGAGGTTTTGGAATGGAAGCCTGCAAGCTGCAAACGTACATATGACCCAATTTTTNTGTATGGACGAGTAGTATGCTTCGTGGAACTGACAAGCCACAGCACTACTCCCTTAGTCCCCAAATAAGTGCAGTTTTGCNCTGTTCATGTTCAACTTTTGACTATTCGTCTTAGTTTGAAATTTTTTTATGATTAATATTTTTATTGTTATTGGATGATAAAACCTGAATAAAAAA      ]


>consensus_8881#1 TCACTGGGAAGAGATCAAGATAAGAACGATAAAGCCATGATTGCAGAAGACGTGATTAGT ACGGAATGAATGCTAGAAAGCTTGTGCATGGTAGGAGGTGGACTACTGAAACCAACCTGA GCACAAGAGCAAGAGGAGCAGAACTCTCCTAGTAACNCCNCTAACACATAGAACACGAGG AAGATCATATTGTCTCTGTCCTGCAAAGAAGCAATCACATACACCCAACATGCAGATATA GGCAGACAGTGAGGTTTTGGAATGGAAGCCTGCAAGCTGCAAACGTACATATGACCCAAT TTTTTTTATGGACGAGTAGTATGCTTCGTGGAACTGACAAGCCACAGCACTACTCCCTTA GTCCCCAAATAAGTGCAGTTTTGCCCTGTTCATGTTCAACTTTTGACTATTCGTCTTATT TGAAATTTTTTTATGATTAATATTTTTATTGTTATTGGATGATAAAACATGAATATAAAA AAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8881#0      TCTACACGCGTCGTTGTCTCGTCCTGGGACTGTGAGGTGCCTCGCTCTTGCGCCGCCGCT 60
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      GCGGAGAGGGGTGGTCGCCGGGAGAAGGAAGGAAGGCGCTACATGGCGCCAACTCTAACG 120
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      GATCCGGATGGTGTTCCTCGATGGGATCGGAGGAAAGGGCGGCAGCCCTCCAGGTTTTTG 180
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      TGCGTCCCATTCGACACCGATTTCTTCTTTTTACGGAGAATCATCCGATCCATTTCCTAG 240
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      GTTTTCCTAGGTTGGGGTAGTATATTTGTTTTCTGTAATCCTTGATCTAATCAAGTAGCC 300
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      GCAGTAATTCTTATGCGATGTTATCTAATTTTCCCCTATCCGCTTTCTGATTGGCACCAT 360
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      AGTACATTTGTTTTTACCCTTGACTAAATTACAGTTCAGAGTCTAGTTCAGTTTCATTGT 420
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      TCTTTTGTTCAAAGGGTATTCGTTCAAATAAGCTCTATATATTGCTTGAGTGGGAAAGGA 480
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      AAGGTTTTAATTCAGAAAGTAATCTATTCATGTTTAAATTTTGGCCACCCGTATATTTTC 540
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      TGAAAAAAAAAATGAATACATAAAGGATGTCGTATTATTAAAGTGTGTTGTGTGACTTGT 600
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      GTCCTAAATATAAGCATCGAGCTCTCGTTCATCGTATTCTAACCATTTAAAAATCATTAG 660
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      TGGTCAAAGTTGAAATAGTGCTTGTCAACAGTGACTGGAATTTGGGAGACCTTGTGTACA 720
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      CTTTTAACCTTTTTTATACTGCATAGCGATTCATCATAAGTTTGTTCTGTACTATGTCCA 780
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      TTTGTTCATGTAAAAATGTAGATGAACTCAAAAGGAAAAGGTACCTCATACGGTACTCGC 840
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      ACTCTACAACATCAGCTTCTGCATCCTCAACATTTACATTGCTCAAATCGACACTAATCA 900
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      GAAAATAATCTTGTTGAAGAAGAGGTTTCATTAGATTTCAGCTAGCCATGGTCAAACTAA 960
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      GAGATGTGGTTAACTCTTCCTTCGAGTACTAGTTGTAAATCGCTCAACTAATCTGTAAGC 1020
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      TATGCTAGTCGTACATCAAGTATCTGTGCAGGTGCTAGGTAATCAGATCAAGCCTTTGCT 1080
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      GCAGTATCAACTTTTACTACTAATGGCATCATCAGTCGAGCATCCTTTCCATGCCACAAC 1140
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      AAGGAACCAAATACATGATCCCGTTGAGGCACATCCACATGGAAGTTAACCGTGAAAGTC 1200
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      TTCTTCGCACCGTAATTCTCGAAGACTAGAACTTTTGGAGTCACCGTGACATTGATACCC 1260
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      AGTGGAGCAGACACGAAAGCATGAAGGAGACCATGATGGATATGCACCTTTGACAAGAGC 1320
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      AGCTATTCCTGTAACATGGGGGCACGCCATGGAAGTTCCAGAAAGGATGTTGAAGTGCTT 1380
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      GTCCTCCTTAGCAGGAGACCATGCCGCCAATATGTTCAACCCGGGAGCAGCAATATCTGG 1440
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      CTACAGAATGCATAAGTGTCTTGTAAACACATCAATAAACTTTTGACTGGTAGCTTCGTT 1500
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      TTTCAATTCCGATTACCTTCAGAATCTCCGGTGTCAATGAATTTGGGCCTCTTGAAGAGA 1560
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      AGGCCGCCACCCGGGGAGCATCTCTAGAACCTAAAATCGTCTTCGCTGGTGAAATTTGAT 1620
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      GGTGAGTTTGCCTCTCCCCGCTGGCATTGCCCTCTCCATCTTGTAGGAACCGGAGGCATT 1680
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      CCATGATCTCTGAAACTAGGAGATTCTGGCCATATTCCTGGGGGGAACAGAGGCACAAGG 1740
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      TAGCTCAGCCGCTGCATCGACGGACAAGCCCATGAAATCCCATGAATGAGTGGTGTGGAG 1800
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      GCTCCTCTTTGTGTTTGGGAACACTGAGATGACACCAGGCATATCTGCAGAAGTGTGCAG 1860
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      CAGAGTTAGCTTTCAGTCATCATCACACCAGGATCACGTGTCAGGATGCTAAAGACATCA 1920
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      GAAGCCATGCATATACAAGGAAATTACTGGCTAATTTCATGGCTTGTTGTTTGTTCAGCT 1980
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      TTGCTGCAAATCCTTGGAAACCGTTGCTGTAAGTGTAGACATGCGATGCCTCTGCCTTCT 2040
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      CCATGCTGAGACCAAGCATCCAATTAGTCAAGCTACAGAACAAGTATGGAAGCTAGATTG 2100
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      ATAGATATCAACAGCTGATGATGAACTCATTCCAAACCTTCCGTCATGAACAGCTGTCAG 2160
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      CATCTGGTGATGAAGCCTCAGCATGTCATGCCGATTCTCAGTGCTGCCTTGCAATCCTTT 2220
consensus_8881#1      ------------------------------------------------------------
                                                                                  

consensus_8881#0      GCCCATGTAGACCACATAAACCTGAAATATAAGCATCCATCAAGGAAATGTTAGATCACT 2280
consensus_8881#1      -------------------------------------------------------TCACT 5
                                                                             *****

consensus_8881#0      GGGAAGAGATCAAGA-AAGAA-GATAAAGCCATGATTGCAGAAGA-GTGAGTAGTACGGA 2337
consensus_8881#1      GGGAAGAGATCAAGATAAGAACGATAAAGCCATGATTGCAGAAGACGTGATTAGTACGGA 65
                      *************** ***** *********************** **** *********

consensus_8881#0      ATGAATGCAAGAAAGCTTGTGCATGGTAGGAGGTGGACTACTGAAACCAACCTGAGCACA 2397
consensus_8881#1      ATGAATGCTAGAAAGCTTGTGCATGGTAGGAGGTGGACTACTGAAACCAACCTGAGCACA 125
                      ******** ***************************************************

consensus_8881#0      AGAGCAAGAGGAGCAGAACTCTCCTAGTAACACCACAAACACATAGAACACGAGGAAGAT 2457
consensus_8881#1      AGAGCAAGAGGAGCAGAACTCTCCTAGTAACNCCNCTAACACATAGAACACGAGGAAGAT 185
                      ******************************* ** * ***********************

consensus_8881#0      CATATTGTCTCTGTCCTGCAAAGAAGCAATCACATACACCCAAACATGCAGATATAGGCA 2517
consensus_8881#1      CATATTGTCTCTGTCCTGCAAAGAAGCAATCACATACACCCAA-CATGCAGATATAGGCA 244
                      ******************************************* ****************

consensus_8881#0      GACAGTGAGGTTTTGGAATGGAAGCCTGCAAGCTGCAAACGTACATATGACCAAATTTTT 2577
consensus_8881#1      GACAGTGAGGTTTTGGAATGGAAGCCTGCAAGCTGCAAACGTACATATGACCCAATTTTT 304
                      **************************************************** *******

consensus_8881#0      TTTATGGACGAGTAGTATGCTTTGTGGAACTGACAAGCCACAGCACTACTCCCTCAGTCC 2637
consensus_8881#1      TTTATGGACGAGTAGTATGCTTCGTGGAACTGACAAGCCACAGCACTACTCCCTTAGTCC 364
                      ********************** ******************************* *****

consensus_8881#0      CAAAATAAGTGCAGTTTTGCACTGTTCATGTTCAACTTTTGATCATTCGTCTTATTTGAA 2697
consensus_8881#1      CCAAATAAGTGCAGTTTTGCCCTGTTCATGTTCAACTTTTGACTATTCGTCTTATTTGAA 424
                      * ****************** *********************  ****************

consensus_8881#0      ATTTTTTTATGATTAATATTTTTATTGTTATTGGATGATAAAACATGAATAGTACTTTAT 2757
consensus_8881#1      ATTTTTTTATGATTAATATTTTTATTGTTATTGGATGATAAAACATGAATATAAAAAAAA 484
                      ***************************************************  *    * 

consensus_8881#0      GTGTGACTAATTTTTTTTAAAAAAAAAAAAAAAAATAAA 2796
consensus_8881#1      AA------------------------------------- 486
                                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)