These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8891#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1401 fasta sequence [TTCCTCGAGCACTGTTGGCCTACTGGATCCGCTCCCGCACGTTTGCATCGCCGCTAACCTCCGCCTGGCCCCGCACGCCTGCGCCGCCGATTCCCTCCGCCTGCACCGTCGTTCTCCCCATGCCGCACCGCCGCTTCCCTCCGCCCGCTCCTCTCCCGCGCCGCCCTCTCCACCTCTCCTCACGTCCCGTCACGCCTGCCCACCTCAGCCGCAGCCCACAAGCAGGGTCCCCGATCCCGTAAACCCTAGCCTTTGCCTCGCCCTCGCTGCCTCGCTGGCTGGATCCCCACTATCTGGGCGCCGTCGATCCGTCGCCGTCTGGTCTCCATCGAGCCGCATCGCCCTCGCGTCTCCACCACACCTCGCCGTCGATTACCCGCAGTCCGGCCGCCGTCGATCCCTCGACATCTTGTGTCCGCCGCGACTCCTCTGCCCCCTCCGCAAACTCATCCGGATCACGTCTCCCTTGCTGCTCCTGTGTAAGACAAATGTGAATCTATGTTGAGTTCCATCCGGACAACTGTGGGCGAAAAGGCAAAGATTTTAATGGCTGACGAAGGCCAGCGACCGGAATTTGACGATGAAGTAGCGCCAAAGATTGAAAGAAAGAGAGAAAGAGATCACAACCTGGTGGAATATCTAGCTTCAGCGGAATAGAAGGGTCTTCCATCGCGTTTGCTCAGATAACAGAAAAGTGGCGCAGTTAAGCTGGTGGATCTATGGAGAGAGATGGAGCAACTGCACCACCGCTAATGGTGAAACACAATGTGTTTGAGGAGAAGGGTCATGCTAACAGATAGGTGATGTATTGATACAATGGATTGTTTCCAGCAATTTTCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAAGCCATAATTTCCAGGTTCAATCACGAAAACATGCATCTGGGATATTTAATTTTCCAGCATGCAAGCTAGCTATAAACTGCACTGAACATCATTAATCTGGCATTGGCAGATTTTCAGGCCAGTGCCATAAAGCCCCTTGAACTTGTCAGTGCCATATATAGTAACTTGTACAGGTGGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGCATGTAGAATAGCTTGCTTTGGATGGAGAAATCTACTGGAAGGATGGTAAATCGTCTTTTGTACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGATTGGGTGTTTGTGGTGCGGGCATCTGACCTGTATTTCTTAGATTGTAATCAGATGCATTTTGTGAAGGATAAAGTCATCAACAGTAAATTAATTGTGTAAAAAAGATGTATTTGTTTCATGATCATTAATTTAATTGGTGCACTTGGCAAAAAAAAAAAAAAAGGCCACATGT] [+] EMBL AK109366 [TTCCTCGAGCACTGTTGGCCTACTGGATCCGCTCCCGCACGTTTGCATCGCCGCTAACCTCCGCCTGGCCCCGCACGCCTGCGCCGCCGATTCCCTCCGCCTGCACCGTCGTTCTCCCCATGCCGCACCGCCGCTTCCCTCCGCCCGCTCCTCTCCCGCGCCGCCCTCTCCACCTCTCCTCACGTCCCGTCACGCCTGCCCACCTCAGCCGCAGCCCACAAGCAGGGTCCCCGATCCCGTAAACCCTAGCCTTTGCCTCGCCCTCGCTGCCTCGCTGGCTGGATCCCCACTATCTGGGCGCCGTCGATCCGTCGCCGTCTGGTCTCCATCGAGCCGCATCGCCCTCGCGTCTCCACCACACCTCGCCGTCGATTACCCGCAGTCCGGCCGCCGTCGATCCCTCGACATCTTGTGTCCGCCGCGACTCCTCTGCCCCCTCCGCAAACTCATCCGGATCACGTCTCCCTTGCTGCTCCTGTGTAAGACAAATGTGAATCTATGTTGAGTTCCATCCGGACAACTGTGGGCGAAAAGGCAAAGATTTTAATGGCTGACGAAGGCCAGCGACCGGAATTTGACGATGAAGTAGCGCCAAAGATTGAAAGAAAGAGAGAAAGAGATCACAACCTGGTGGAATATCTAGCTTCAGCGGAATAGAAGGGTCTTCCATCGCGTTTGCTCAGATAACAGAAAAGTGGCGCAGTTAAGCTGGTGGATCTATGGAGAGAGATGGAGCAACTGCACCACCGCTAATGGTGAAACACAATGTGTTTGAGGAGAAGGGTCATGCTAACAGATAGGTGATGTATTGATACAATGGATTGTTTCCAGCAATTTTCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAAGCCATAATTTCCAGGTTCAATCACGAAAACATGCATCTGGGATATTTAATTTTCCAGCATGCAAGCTAGCTATAAACTGCACTGAACATCATTAATCTGGCATTGGCAGATTTTCAGGCCAGTGCCATAAAGCCCCTTGAACTTGTCAGTGCCATATATAGTAACTTGTACAGGTGGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGCATGTAGAATAGCTTGCTTTGGATGGAGAAATCTACTGGAAGGATGGTAAATCGTCTTTTGTACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGATTGGGTGTTTGTGGTGCGGGCATCTGACCTGTATTTCTTAGATTGTAATCAGATGCATTTTGTGAAGGATAAAGTCATCAACAGTAAATTAATTGTGTAAAAAAGATGTATTTGTTTCATGATCATTAATTTAATTGGTGCACTTGGCAAAAAAAAAAAAAAAGGCCACATGT] consensusID : consensus_8891#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 823 fasta sequence [CAAAGATTTTAATGGCTGACGAAGGCCAGCGACCGGAATTTGACGATGAAGTAGCGATTGAAAGAAAGAGAGAAAGAGATCACAACCTGGTGGAATATCTAGCTTCAGCGGAATAGAAGGGTCTTCCATCGCGTTTGCTCAGATAACAGAAAAGTGGCGCAGTTAAGCTGGTGGATCTACGGAGAGAGATGGAGCAACTGCACCACCGCTAATGGTGAAACACAATGTGTTTGAGGAGAAGATAGGTGATGTATTGATACAATGGATTGTTTCCAGCAATTTTCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAAGCCATAATTTCCAGGTTCAATCACGAAAATATGCATCTGGGATATTTAATTTTCCAGCATGCAAGCTAGCTATAAACTGCACTGAACATCATTAATCTGGCATTGTCAGATTTTCAGGCCAGTGCCATAAAGCCCCTTGAACTTGTCAGTGCCATATATAGTAACTTGTACAGGTGGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGCATGTAGAATAGCTTGCTTTGGATGGAGAAATCTACTGGAAGGATGGTAAATCGTCTTTTGTACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGATTGGGTGTTTGTGGTGCGGGCATCTGACCTGTATTTCTTTAGATTGGAATCAGATGCATTTTTGNGAAGGATAAAGCCNTCAACAGTAAATTAATTGNGTAAAAAAGATGTATTTGGTTCNAAAAAAAAAAAAAAAAAAAAAGCGGCCCG] [+] EMBL CA767073 [CAAAGATTTTAATGGCTGACGAAGGCCAGCGACCGGAATTTGACGATGAAGTAGCGATTGAAAGAAAGAGAGAAAGAGATCACAACCTGGTGGAATATCTAGCTTCAGCGGAATAGAAGGGTCTTCCATCGCGTTTGCTCAGATAACAGAAAAGTGGCGCAGTTAAGCTGGTGGATCTACGGAGAGAGATGGAGCAACTGCACCACCGCTAATGGTGAAACACAATGTGTTTGAGGAGAAGATAGGTGATGTATTGATACAATGGATTGTTTCCAGCAATTTTCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAAGCCATAATTTCCAGGTTCAATCACGAAAATATGCATCTGGGATATTTAATTTTCCAGCATGCAAGCTAGCTATAAACTGCACTGAACATCATTAATCTGGCATTGTCAGATTTTCAGGCCAGTGCCATAAAGCCCCTTGAACTTGTCAGTGCCATATATAGTAACTTGTACAGGTGGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGCATGTAGAATAGCTTGCTTTGGATGGAGAAATCTACTGGAAGGATGGTAAATCGTCTTTTGTACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGATTGGGTGTTTGTGGTGCGGGCATCTGACCTGTATTTCTTTAGATTGGAATCAGATGCATTTTTGNGAAGGATAAAGCCNTCAACAGTAAATTAATTGNGTAAAAAAGATGTATTTGGTTCNAAAAAAAAAAAAAAAAAAAAAGCGGCCCG] consensusID : consensus_8891#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 792 fasta sequence [GGCCCCGCACGCCTGCGCCGCCGATTCCCTCCGCCTGCACCGTCGTTCTCCCCATGCCGCACCGCCGCTTCCCTCCGCCCGCTCCTCTCCCGCGCCGCCCTCTCCACCTCTCCTCACGTCCCGTCACGCCTGCCCACCTCAGCCGCAGCCCACAAGCAGGGTCCCCGATCCCGTAAACCCTAGCCTTTGCCTCGCCCTCGCTGCCTCGCTGGCTGGATCCCCACTATCTGGGCGCCGTCGATCCGTCGCCGTCTGGTCTCCATCGAGCCGCATCGCCCTCGCGTCTCCACCACACCTCGCCGTCGATTACCCGCAGTCCGGCCGCCGTCGATCCCTCGACATCTTGTGTCCGCCGCGACTCCTCTGCCCCCTCCGCAAACTCATCCGGATCACGTCTCCCTTGCTGCTCCTGTGTAAGACAAATGTGAATCTATGTTGAGTTCCATCCGGACAACTGTGGGCGAAAAGGCAAAGATTTTAATGGCTGACGAAGGCCAGCGACCGGAATTTGACGATGAAGTAGCGGTAAGTGGAATTCCTCTGTTCCATAGCCAATTACCTTCTCCTCCCAAGTTATTCTCTATGTTTGGTGCCTCTCAAAAATTAAAATTAACTTAGGATTTTTTTTAATAGATCGATAGTGGCTGCACAGATTACCATGTGCGTGCAATGGACCCTATGAAATCACAATGTTTGGGAGTAAATTTAGTAAAAGATTGCTATTTCACTGTCAATGTTTGGGAGTANATTTGTGCCTGCAGAAGTTTGGTTTTATCCCCTAATGCATACGAG] [+] EMBL CB676808 [GGCCCCGCACGCCTGCGCCGCCGATTCCCTCCGCCTGCACCGTCGTTCTCCCCATGCCGCACCGCCGCTTCCCTCCGCCCGCTCCTCTCCCGCGCCGCCCTCTCCACCTCTCCTCACGTCCCGTCACGCCTGCCCACCTCAGCCGCAGCCCACAAGCAGGGTCCCCGATCCCGTAAACCCTAGCCTTTGCCTCGCCCTCGCTGCCTCGCTGGCTGGATCCCCACTATCTGGGCGCCGTCGATCCGTCGCCGTCTGGTCTCCATCGAGCCGCATCGCCCTCGCGTCTCCACCACACCTCGCCGTCGATTACCCGCAGTCCGGCCGCCGTCGATCCCTCGACATCTTGTGTCCGCCGCGACTCCTCTGCCCCCTCCGCAAACTCATCCGGATCACGTCTCCCTTGCTGCTCCTGTGTAAGACAAATGTGAATCTATGTTGAGTTCCATCCGGACAACTGTGGGCGAAAAGGCAAAGATTTTAATGGCTGACGAAGGCCAGCGACCGGAATTTGACGATGAAGTAGCGGTAAGTGGAATTCCTCTGTTCCATAGCCAATTACCTTCTCCTCCCAAGTTATTCTCTATGTTTGGTGCCTCTCAAAAATTAAAATTAACTTAGGATTTTTTTTAATAGATCGATAGTGGCTGCACAGATTACCATGTGCGTGCAATGGACCCTATGAAATCACAATGTTTGGGAGTAAATTTAGTAAAAGATTGCTATTTCACTGTCAATGTTTGGGAGTANATTTGTGCCTGCAGAAGTTTGGTTTTATCCCCTAATGCATACGAG] consensusID : consensus_8891#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 705 fasta sequence [TAATATAAAAAATGCTAAGAATTATGCTTGAGTTTGGACTTCTAACAATCAGATCCCTCCCTGATATAATATGTACTCTAAATGATGGTAATATAGCCAATAGTTTTAGAATGCATGTGTGGTGACCATTTAGGATTTTCATACGGTACTTATTACCTTTAGGTAACAACTTTAGCATATTGTAAGGGCTATCTGATGTGCAACTTTAGCTATCTGATCAATGCTACTATTGCAATTATCTTTGAGCTGCAAACCACAAGAAAGCTACACTGTTCAAAAAAAATCCCCTTTTCCTTATGCATAGTTGCATTACTTTCAGTATTACAAAATGATCATGCAACATTCCTCTTGTGCTTATTATGTATAACATCTTTTCTAGGTGGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGCATGTAGAATAGCTTGCTTTGGATGGAGAAATCTACTGGAAGGATGGTAAATCGTCTTTTGTACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGATTGGGTGTTTGTGGTGCGGGCATCTGACCTGTATTTCTTAGATTGTAATCAGATGCATTTTGTGAAGGATAAAGTCATCACCAGTAAATTAATTGTGTAAAAAAGATGTATTTGTTTCAGAAGCATTAATTTAATTGGTGCACTT] [-] EMBL CB676809 [TAATATAAAAAATGCTAAGAATTATGCTTGAGTTTGGACTTCTAACAATCAGATCCCTCCCTGATATAATATGTACTCTAAATGATGGTAATATAGCCAATAGTTTTAGAATGCATGTGTGGTGACCATTTAGGATTTTCATACGGTACTTATTACCTTTAGGTAACAACTTTAGCATATTGTAAGGGCTATCTGATGTGCAACTTTAGCTATCTGATCAATGCTACTATTGCAATTATCTTTGAGCTGCAAACCACAAGAAAGCTACACTGTTCAAAAAAAATCCCCTTTTCCTTATGCATAGTTGCATTACTTTCAGTATTACAAAATGATCATGCAACATTCCTCTTGTGCTTATTATGTATAACATCTTTTCTAGGTGGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGCATGTAGAATAGCTTGCTTTGGATGGAGAAATCTACTGGAAGGATGGTAAATCGTCTTTTGTACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGATTGGGTGTTTGTGGTGCGGGCATCTGACCTGTATTTCTTAGATTGTAATCAGATGCATTTTGTGAAGGATAAAGTCATCACCAGTAAATTAATTGTGTAAAAAAGATGTATTTGTTTCAGAAGCATTAATTTAATTGGTGCACTT] consensusID : consensus_8891#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 690 fasta sequence [AAGTGGCCCAGTTAAGCTGGTGGATTTCCGGAGAGAGATGGAGCAACTGCACCCCCGCTAATGGTGAAACACAATGTGTTTGAGGAGAAGATAGGTGATGTATTGATACAATGGATTGTTTCCAGCAATTTTCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAAGCCATAATTTCCAGGTTCAATCGCGAAAATATGCATCTGGGATATTTAATTTTCCAGCATGCAAGCTAGCTATAAACTGCGCTGAACATCATTAATCTGGCATTGTCAGATTTTCAGGCCAGTGCCATAAAGCCCCTTGAACTTGTCAGTGCCATATATAGTAACTTGTACAGGTGGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGCATGTAGAATAGCTTGCTTTGGATGGAGAAATTTACTGGAAGGATGGTAAATCGTCTTTTGTACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGATTGGGTGTTTGTGGTGCGGGCATCTGACCTGTATTTCTTAGATTGTAATCAGATGCATTTTGTGAAGGATAAAGTCATCAACAGTAAATTAATTGTGTAAAAAAGATGTATTTGTTTCATGATCATTAATTTAATTGGCGCACTTTGCAATGGTAAAAAAAAAAAAAA] [-] EMBL CA761632 [AAGTGGCCCAGTTAAGCTGGTGGATTTCCGGAGAGAGATGGAGCAACTGCACCCCCGCTAATGGTGAAACACAATGTGTTTGAGGAGAAGATAGGTGATGTATTGATACAATGGATTGTTTCCAGCAATTTTCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAAGCCATAATTTCCAGGTTCAATCGCGAAAATATGCATCTGGGATATTTAATTTTCCAGCATGCAAGCTAGCTATAAACTGCGCTGAACATCATTAATCTGGCATTGTCAGATTTTCAGGCCAGTGCCATAAAGCCCCTTGAACTTGTCAGTGCCATATATAGTAACTTGTACAGGTGGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGCATGTAGAATAGCTTGCTTTGGATGGAGAAATTTACTGGAAGGATGGTAAATCGTCTTTTGTACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGATTGGGTGTTTGTGGTGCGGGCATCTGACCTGTATTTCTTAGATTGTAATCAGATGCATTTTGTGAAGGATAAAGTCATCAACAGTAAATTAATTGTGTAAAAAAGATGTATTTGTTTCATGATCATTAATTTAATTGGCGCACTTTGCAATGGTAAAAAAAAAAAAAA] consensusID : consensus_8891#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 490 fasta sequence [TCAGGGTCATGCTAACAGATAGGTGATGTATTGATACAATGGATTGTTTCCAGCAATTTTCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAAGCCATAATTTCCAGATAAAACAACAGGCTGCATACTATTTTCTGGATTTTTCTATGGGCATGCATGCTCACCAGAGTGGGAGTATATTGCATCCCATGACTAAATTTATCATACATTTGTCAACCTGCTGACCACAGGTTTTTTAGCTTCTTATTCATAACTACAGTTAGCAAGCAATGGTTTCAATATGTTCGTACTTGAGGGAGGCCATATACCTAAAATAAGTATATGTCAGTATTTTCAATAAAGCATGTGAATATGTTTGAAAGGTGGTGCAGAGCTTGCAAGTTATCTTCTCATTTTATCCAATAAACTATTTATTTAGCTTTTAGTAGCTCTGTATTTTTTTTCTATCTTCCTTTCTCTGTAAAGATAAAGATGAAATGCTTTTAGT] [+] EMBL CF304639 [TCAGGGTCATGCTAACAGATAGGTGATGTATTGATACAATGGATTGTTTCCAGCAATTTTCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAAGCCATAATTTCCAGATAAAACAACAGGCTGCATACTATTTTCTGGATTTTTCTATGGGCATGCATGCTCACCAGAGTGGGAGTATATTGCATCCCATGACTAAATTTATCATACATTTGTCAACCTGCTGACCACAGGTTTTTTAGCTTCTTATTCATAACTACAGTTAGCAAGCAATGGTTTCAATATGTTCGTACTTGAGGGAGGCCATATACCTAAAATAAGTATATGTCAGTATTTTCAATAAAGCATGTGAATATGTTTGAAAGGTGGTGCAGAGCTTGCAAGTTATCTTCTCATTTTATCCAATAAACTATTTATTTAGCTTTTAGTAGCTCTGTATTTTTTTTCTATCTTCCTTTCTCTGTAAAGATAAAGATGAAATGCTTTTAGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8891#1 ------------------------------------------------------------ consensus_8891#4 ------------------------------------------------------------ consensus_8891#0 TTCCTCGAGCACTGTTGGCCTACTGGATCCGCTCCCGCACGTTTGCATCGCCGCTAACCT 60 consensus_8891#3 ------------------------------------------------------------ consensus_8891#5 ------------------------------------------------------------ consensus_8891#2 ------------------------------------------------------------ consensus_8891#1 ------------------------------------------------------------ consensus_8891#4 ------------------------------------------------------------ consensus_8891#0 CCGCCTGGCCCCGCACGCCTGCGCCGCCGATTCCCTCCGCCTGCACCGTCGTTCTCCCCA 120 consensus_8891#3 ------------------------------------------------------------ consensus_8891#5 ------------------------------------------------------------ consensus_8891#2 ------------------------------------------------------------ consensus_8891#1 ------------------------------------------------------------ consensus_8891#4 ------------------------------------------------------------ consensus_8891#0 TGCCGCACCGCCGCTTCCCTCCGCCCGCTCCTCTCCCGCGCCGCCCTCTCCACCTCTCCT 180 consensus_8891#3 ------------------------------------------------------------ consensus_8891#5 ------------------------------------------------------------ consensus_8891#2 ------------------------------------------------------------ consensus_8891#1 ------------------------------------------------------------ consensus_8891#4 ------------------------------------------------------------ consensus_8891#0 CACGTCCCGTCACGCCTGCCCACCTCAGCCGCAGCCCACAAGCAGGGTCCCCGATCCCGT 240 consensus_8891#3 ------------------------------------------------------------ consensus_8891#5 ------------------------------------------------------------ consensus_8891#2 ------------------------------------------------------------ consensus_8891#1 ------------------------------------------------------------ consensus_8891#4 ------------------------------------------------------------ consensus_8891#0 AAACCCTAGCCTTTGCCTCGCCCTCGCTGCCTCGCTGGCTGGATCCCCACTATCTGGGCG 300 consensus_8891#3 ------------------------------------------------------------ consensus_8891#5 ------------------------------------------------------------ consensus_8891#2 ------------------------------------------------------------ consensus_8891#1 ------------------------------------------------------------ consensus_8891#4 ------------------------------------------------------------ consensus_8891#0 CCGTCGATCCGTCGCCGTCTGGTCTCCATCGAGCCGCATCGCCCTCGCGTCTCCACCACA 360 consensus_8891#3 ------------------------------------------------------------ consensus_8891#5 ------------------------------------------------------------ consensus_8891#2 ------------------------------------------------------------ consensus_8891#1 ------------------------------------------------------------ consensus_8891#4 ------------------------------------------------------------ consensus_8891#0 CCTCGCCGTCGATTACCCGCAGTCCGGCCGCCGTCGATCCCTCGACATCTTGTGTCCGCC 420 consensus_8891#3 ------------------------------------------------------------ consensus_8891#5 ------------------------------------------------------------ consensus_8891#2 ------------------------------------------------------------ consensus_8891#1 ------------------------------------------------------------ consensus_8891#4 ------------------------------------------------------------ consensus_8891#0 GCGACTCCTCTGCCCCCTCCGCAAACTCATCCGGATCACGTCTCCCTTGCTGCTCCTGTG 480 consensus_8891#3 ------------------------------------------------------------ consensus_8891#5 ------------------------------------------------------------ consensus_8891#2 ------------------------------------------------------------ consensus_8891#1 -------------------------------------------------------CAAAG 5 consensus_8891#4 ------------------------------------------------------------ consensus_8891#0 TAAGACAAATGTGAATCTATGTTGAGTTCCATCCGGACAACTGTGGGCGAAAAGGCAAAG 540 consensus_8891#3 ------------------------------------------------------------ consensus_8891#5 ------------------------------------------------------------ consensus_8891#2 ------------------------------------------------------------ consensus_8891#1 ATTTTAATGGCTGACGAAGGCCAGCGACCGGAATTTGACGATGAAGTAGCG------ATT 59 consensus_8891#4 ------------------------------------------------------------ consensus_8891#0 ATTTTAATGGCTGACGAAGGCCAGCGACCGGAATTTGACGATGAAGTAGCGCCAAAGATT 600 consensus_8891#3 ------------------------------------------------------------ consensus_8891#5 ------------------------------------------------------------ consensus_8891#2 ------------------------------------------------------------ consensus_8891#1 GAAAGAAAGAGAGAAAGAGATCACAACCTGGTGGAATATCTAGCTTCAGCGGAATAGAAG 119 consensus_8891#4 ------------------------------------------------------------ consensus_8891#0 GAAAGAAAGAGAGAAAGAGATCACAACCTGGTGGAATATCTAGCTTCAGCGGAATAGAAG 660 consensus_8891#3 ------------------------------------------------------------ consensus_8891#5 ------------------------------------------------------------ consensus_8891#2 -----------------------------------------------GGCCCCGCACGCC 13 consensus_8891#1 GGTCTTCCATCGCGTTTGCTCAGATAACAGAAAAGTGGCGCAG--TTAAGCTGGTGGATC 177 consensus_8891#4 --------------------------------AAGTGGCCCAG--TTAAGCTGGTGGATT 26 consensus_8891#0 GGTCTTCCATCGCGTTTGCTCAGATAACAGAAAAGTGGCGCAG--TTAAGCTGGTGGATC 718 consensus_8891#3 ------------------------TAATATAAAAAATGCTAAGAATTATGCT--TGAGTT 34 consensus_8891#5 ------------------------------------------------------------ consensus_8891#2 TGCGCCGCCGATTCCCTCCGCCTGCACCGTCGTTCTCCCCATGCCGCACCGCCGCTTCCC 73 consensus_8891#1 TACGGAGAGAGATGGAGCAACTGCACCACCGCTAATGGTGAAACACAATGTGTTTGAGGA 237 consensus_8891#4 TCCGGAGAGAGATGGAGCAACTGCACCCCCGCTAATGGTGAAACACAATGTGTTTGAGGA 86 consensus_8891#0 TATGGAGAGAGATGGAGCAACTGCACCACCGCTAATGGTGAAACACAATGTGTTTGAGGA 778 consensus_8891#3 T------GGACTTCTAACAATCAGATCCCTCCCTGATATAATATGTACTCTAAATGATGG 88 consensus_8891#5 ------------------------------------------------TCAGGGTCATGC 12 consensus_8891#2 TCCGCCCGCTCCTCTCCCGCGCCGCCCTCTCCACCTCTCCTCACGTCCCGTCACGCCTGC 133 * consensus_8891#1 GAAG--------------ATAGGTG-ATGTATTGATACAATGGATTGTTTCCAGCAATTT 282 consensus_8891#4 GAAG--------------ATAGGTG-ATGTATTGATACAATGGATTGTTTCCAGCAATTT 131 consensus_8891#0 GAAGGGTCATGCTAACAGATAGGTG-ATGTATTGATACAATGGATTGTTTCCAGCAATTT 837 consensus_8891#3 TAATATAGCCAATAGTTTTAGAATGCATGTGTGGTGACCATTTAGGATTTTCA-TACGGT 147 consensus_8891#5 TAACAG------------ATAGGTG-ATGTATTGATACAATGGATTGTTTCCAGCAATTT 59 consensus_8891#2 CCACCTCAGCCGCAGCCCACAAGCAGGGTCCCCGATCCCGTAAACCCTAGCCTTTGCCTC 193 * * * * * * * consensus_8891#1 TCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAA---GCCAT--AATTTCCAG--GT 335 consensus_8891#4 TCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAA---GCCAT--AATTTCCAG--GT 184 consensus_8891#0 TCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAA---GCCAT--AATTTCCAG--GT 890 consensus_8891#3 ACTTATTACCTTTAGGTAACAACTTTAGCATATTGTAAGGGCTATCTGATGTGCAA--CT 205 consensus_8891#5 TCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAA---GCCAT--AATTTCCAG--AT 112 consensus_8891#2 GCCCTCGCTGCCTCGCTGGCTGGATCCCCACTATCTGGGCGCCGTC-GATCCGTCGCCGT 252 * * ** * ** * ** * consensus_8891#1 TCAATCACGAAAATA-TGCATCTGGGATATTTAATTTTCCAGCATGCAAGCTAGCTATAA 394 consensus_8891#4 TCAATCGCGAAAATA-TGCATCTGGGATATTTAATTTTCCAGCATGCAAGCTAGCTATAA 243 consensus_8891#0 TCAATCACGAAAACA-TGCATCTGGGATATTTAATTTTCCAGCATGCAAGCTAGCTATAA 949 consensus_8891#3 TTAGCTATCTGATCAATGCTACTATTGCAATTA-TCTTTGAGC-TGCAAACCACAAGAAA 263 consensus_8891#5 AAAACAACAGGCTGCATACTATTTTCTGGATTTTTCTATGGGCATGCATGCT-CACCAGA 171 consensus_8891#2 CTGGTCTCCATCGAGCCGCATCGCCCTCGCGTCTCCACCACACCTCGCCGTCGATTACCC 312 * * * * consensus_8891#1 ACTGCACTGAACATCATTAATCTG-----------GCATTGTCAGATT---TTCAGGC-- 438 consensus_8891#4 ACTGCGCTGAACATCATTAATCTG-----------GCATTGTCAGATT---TTCAGGC-- 287 consensus_8891#0 ACTGCACTGAACATCATTAATCTG-----------GCATTGGCAGATT---TTCAGGC-- 993 consensus_8891#3 GCTACACTGTTCAAAAAAAATCCCCTTTTCCTTATGCATAGTTGCATTACTTTCAGTATT 323 consensus_8891#5 GTGG----GAGTATATTGCATCCC-------------ATGACTAAATT--TATCATACAT 212 consensus_8891#2 GCAGT-CCGGCCGCCGTCGATCCCTCGACATCTTGTGTCCGCCGCGACTCCTCTGCCCCC 371 * *** consensus_8891#1 -CAGTGCCATAAA--GCCCC-TTGAACTTGTCAGTGCCATATATAGTAACTTGTACAGGT 494 consensus_8891#4 -CAGTGCCATAAA--GCCCC-TTGAACTTGTCAGTGCCATATATAGTAACTTGTACAGGT 343 consensus_8891#0 -CAGTGCCATAAA--GCCCC-TTGAACTTGTCAGTGCCATATATAGTAACTTGTACAGGT 1049 consensus_8891#3 ACAAAATGATCAT--GCAACATTCCTCTTGTGCTTATTATGTATAACATCTTTTCTAGGT 381 consensus_8891#5 TTGTCAACCTGCT--GACCACAGGTTTTTTAGCTTCTTATTCATAACTACAGTT---AGC 267 consensus_8891#2 TCCGCAAACTCATCCGGATCACGTCTCCCTTGCTGCTCCTGTGTAA-GACAAATGTGAAT 430 * * * ** * * consensus_8891#1 GGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGC 554 consensus_8891#4 GGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGC 403 consensus_8891#0 GGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGC 1109 consensus_8891#3 GGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGC 441 consensus_8891#5 AAGCAATGGTTTCAATATGTTCGTACTTGAGGGAGGCCATATACCT---AAAATAAGTAT 324 consensus_8891#2 CTATGTTGAGTTCCATCCGGACAACTGTGGGCGAAAAGGCAAAGATTTTAATGGCTGACG 490 ** * * * * * * * * * consensus_8891#1 ATGTAGAATAGCTTGCTTTGGATGGAGAAATCTACTGGAAGGATGGTAAATCGTCTTTTG 614 consensus_8891#4 ATGTAGAATAGCTTGCTTTGGATGGAGAAATTTACTGGAAGGATGGTAAATCGTCTTTTG 463 consensus_8891#0 ATGTAGAATAGCTTGCTTTGGATGGAGAAATCTACTGGAAGGATGGTAAATCGTCTTTTG 1169 consensus_8891#3 ATGTAGAATAGCTTGCTTTGGATGGAGAAATCTACTGGAAGGATGGTAAATCGTCTTTTG 501 consensus_8891#5 ATGTC-AGTATTTTCAATAAAGCATGTGAATATGTTTGAAAGGTGGTGCA---------G 374 consensus_8891#2 AAGGCCAGCGACCGGAATTTGACGATGAAGTA-GCGGTAAGTGGAATTCCTCTGTTCCAT 549 * * * * * * ** * consensus_8891#1 TACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGAT 674 consensus_8891#4 TACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGAT 523 consensus_8891#0 TACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGAT 1229 consensus_8891#3 TACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGAT 561 consensus_8891#5 AGCTTGCAA-GTTATC-----TTCTCATTTTATCCAATAAACTATTTATTTAGCTTTTAG 428 consensus_8891#2 AGCCAATTACCTTCTCCTCCCAAGTTATTCTCTATGTTTGGTGCCTCTCAAAAATTAAAA 609 * * ** *** * * * * * consensus_8891#1 TGGGTGTTTG--TGGTGCGGGCATCTGACCTGTATTTCTTTAGATTGGAATCAG-ATGCA 731 consensus_8891#4 TGGGTGTTTG--TGGTGCGGGCATCTGACCTGTATTTCTT-AGATTGTAATCAG-ATGCA 579 consensus_8891#0 TGGGTGTTTG--TGGTGCGGGCATCTGACCTGTATTTCTT-AGATTGTAATCAG-ATGCA 1285 consensus_8891#3 TGGGTGTTTG--TGGTGCGGGCATCTGACCTGTATTTCTT-AGATTGTAATCAG-ATGCA 617 consensus_8891#5 TAGCTCTGTA--TTTTTTTTCTATCTT-CCTTTCTCTGTAAAGATAAAGATGAA-ATGC- 483 consensus_8891#2 TTAACTTAGGATTTTTTTTAATAGATCGATAGTGGCTGCACAGATTACCATGTGCGTGCA 669 * * * * * * * * **** ** *** consensus_8891#1 TTTTTGNGAAGGATAAAGCCNTCAACAGTAAATTAATTGNGTAAAAAAGATGTATTTGG- 790 consensus_8891#4 TTTT-GTGAAGGATAAAGTCATCAACAGTAAATTAATTGTGTAAAAAAGATGTATTTG-- 636 consensus_8891#0 TTTT-GTGAAGGATAAAGTCATCAACAGTAAATTAATTGTGTAAAAAAGATGTATTTG-- 1342 consensus_8891#3 TTTT-GTGAAGGATAAAGTCATCACCAGTAAATTAATTGTGTAAAAAAGATGTATTTG-- 674 consensus_8891#5 TTTTAGT----------------------------------------------------- 490 consensus_8891#2 ATGGACCCTATGA-AATCACAATGTTTGGGAGTAAATTTAGTAAAAGATTGCTATTTCAC 728 * consensus_8891#1 TTCNAAAAAAAAAAAAAAAAAAAAAGCGGCCCG--------------------------- 823 consensus_8891#4 TTTCATGATCATTAATTTAATTGGCGCACTTTGCAATGGTAAAAAAAAAAAAAA------ 690 consensus_8891#0 TTTCATGATCATTAATTTAATTGGTGCACTTGGCAAAAAAAAAAAAAAAGGCCACATGT- 1401 consensus_8891#3 TTTCAGAAGCATTAATTTAATTGGTGCACTT----------------------------- 705 consensus_8891#5 ------------------------------------------------------------ consensus_8891#2 TGTCAATGTTTGGGAGTANATTTGTGCCTGCAGAAGTTTGGTTTTATCCCCTAATGCATA 788 consensus_8891#1 ---- consensus_8891#4 ---- consensus_8891#0 ---- consensus_8891#3 ---- consensus_8891#5 ---- consensus_8891#2 CGAG 792 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||