Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8895 cluster # 8895       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8895#0 length = 2214 sequences # 5  
consensus_8895#1 length = 503 sequences # 1  

consensusID : consensus_8895#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2214
fasta sequence
                              [CTCCTTTCTCTCTCTAAACCTCTCTCTCCTCTCTCTCTCTCTCTTGAGTTCTTGGTTGATCGCCATTGCCGCGGAGGAGCTAGAGGAGATGAGATGAGGGGTGCGGGGTTTCTGCTGCTCGTTGTGTTCGCCGTTGCCGTCGCCGGTGGGGCGGTGGCGGCGGCGGCGGATTTGGACGGCGGCGATGGTGGTGGTGGTGTGGCGGCGGAGTGGCGGTTTCCGAGCTCGAGGATGCGGGACGCGTACGTGGCGCTGCAGACGTGGAGGCGGGAGGCCATCTTCTCCGACCCCGGCAACCTCACCGCCGACTGGGTGGGCCCCGACGTGTGCAACTACACCGGCGTGTTCTGCGCGCCGCTGCCGTGGGATCGCCGGGAGGTCGCCGTCGCCGGC-GTCGACCTCAACCACGGCGAC-ATCGCCGGGTACCTGCCCCCCGAGCTCGGCCTGCTCGCCGACCTCGCGCTGCTCCACCTCAACTCCAACCGCTTCTGCGGCGTGCTCCCGGCCACCCTCCGCCGCCTCCGCCTCCTACACGAGCTCGACCTCAGCAACAACCGCTTCGTCGGGAGGTTCCCCGAGGTGGTGCTCGACATGCCCGCGCTCCGGTTCCTCGACCTCCGCTTCAACGACTTCGAGGGCGGGGTGCCCCGCCAGCTGTTCGACCGGCCGCTCGACGCCATCTTCCTCAACCACAACCGCTTCCGCTTCGACCTCCCGGACAACTTCGGCAACTCGCCGGTCTCCGTCATCGTCCTCGCGCACAACAGCTTCGGCGGCTGCCTCCCGGCGAGCCTCGGCAACATGTCCGGGACGCTCAACGAGATCTTGCTCATCAACACGGGCCTCAGCTCCTGCCTGCCGCCGGAGGTCGGGATGCTGCGAGAGGTGACGGTGTTCGACGTGAGCTTCAACCGGCTCGCCGGCCCGCTGCCGTCGGCGGTGGCCGGGATGAGGAAGGTGGAGCAGCTCGACGTCGCGCACAACCTGCTCACGGGGGCGATACCGCAGGCGGTGTGCGAGCTGCCGCGCCTCAAGAACTTCACCTTCGCGTACAACTTCTTCACCGGCGAGCCGCCGTCCTGCGCGCACGCCGTGCCGCGCTACGGCGACCGGAGGAACTGCCTGCCCAACCGCCCCGCCCAGCGGACGCTGCGGCAGTGCGCCGCGTTCTTCGCGCGCCCTCCCGTCAACTGCGCCGCGTTCCAGTGCAAGCCGTTCGTCCCGGCCCTGCCGCCACCATCGCCGCCACCACCATCACCGCCGCCGCCTTCGCCACCGCCGCCATCCCCACCGCCACCGTCGACATCACCGCCTCCGCCTTCACCACCACCGCCATCTCCACCGCCACCATCGCCTCCACCGCCTGCACCAATCTTCCACCCACCGCAGCCGCCGCCGCCGCCGCCACCACCCGCGCCACAACCGCATCCGCCATGTCCGGAGCTGCCGCCACCACCACCGCCGCCGCCACCCTGCGGCGGCGCAACACCAGCATTGTCACCACCACCACCACCACCTTACTACCCC--GGG-CCATGGCCA-CCTGTCCATGGAGTACCAT-ATGGCTCACCACCACCT-CCCCCTCTGCAACACCACAGCTCATGGCCACCGATCCACAGCGTACCATATGGATCACCACCTCCTCCCCCGCTGCATTGATAGAATTTCTCCGAAGAATGTTTGGAAACATGCATGTGTTCCGCTCTTGCTCCTCACATCCGGCAAATCGACAGCAGCGGAAGTCGCACACAAGTATACGTGGTCATTATCGTTCTTATTAGCTACTAGTGTTCTTGGTTGGTTGATTGATGACTACCGGCGTGAAGAGCGTAGTAAGGTGCACAAAATTTTGTTTGGTTATGATTTGTCGGCGTCAGCATCGAAACAGTTTGTGTTGCTGTGGTGTTGAAAGGGATTGGGAAGTGGTGGGGGTGTGGGGATTTGGAGGATTTGGGAACATATGATTGATGGCTAATTGGGTTGTGAATAATAAGGAAAAGTTTGAGAGGGACAGGAGGGTTTGGCAGAGGATTGTAGGTGCAGGGATATATGTGGTTGTATAGATGAGAATCATGAGTTCAGTTCAGTTAAATTCAGTAGTAGTAAGACATAAGTTTTAGAACAAAAGGATTCTGTGTCATTTCTTCCTGCTGTATCACAATTACTTCTGGCTATTCAATTCTTATTATTATTTAGTAAAAAAAAAAAAAAACTCGA]

[+] EMBL AK103199             [CTCCTTTCTCTCTCTAAACCTCTCTCTCCTCTCTCTCTCTCTCTTGAGTTCTTGGTTGATCGCCATTGCCGCGGAGGAGCTAGAGGAGATGAGATGAGGGGTGCGGGGTTTCTGCTGCTCGTTGTGTTCGCCGTTGCCGTCGCCGGTGGGGCGGTGGCGGCGGCGGCGGATTTGGACGGCGGCGATGGTGGTGGTGGTGTGGCGGCGGAGTGGCGGTTTCCGAGCTCGAGGATGCGGGACGCGTACGTGGCGCTGCAGACGTGGAGGCGGGAGGCCATCTTCTCCGACCCCGGCAACCTCACCGCCGACTGGGTGGGCCCCGACGTGTGCAACTACACCGGCGTGTTCTGCGCGCCGCTGCCGTGGGATCGCCGGGAGGTCGCCGTCGCCGGC GTCGACCTCAACCACGGCGAC ATCGCCGGGTACCTGCCCCCCGAGCTCGGCCTGCTCGCCGACCTCGCGCTGCTCCACCTCAACTCCAACCGCTTCTGCGGCGTGCTCCCGGCCACCCTCCGCCGCCTCCGCCTCCTACACGAGCTCGACCTCAGCAACAACCGCTTCGTCGGGAGGTTCCCCGAGGTGGTGCTCGACATGCCCGCGCTCCGGTTCCTCGACCTCCGCTTCAACGACTTCGAGGGCGGGGTGCCCCGCCAGCTGTTCGACCGGCCGCTCGACGCCATCTTCCTCAACCACAACCGCTTCCGCTTCGACCTCCCGGACAACTTCGGCAACTCGCCGGTCTCCGTCATCGTCCTCGCGCACAACAGCTTCGGCGGCTGCCTCCCGGCGAGCCTCGGCAACATGTCCGGGACGCTCAACGAGATCTTGCTCATCAACACGGGCCTCAGCTCCTGCCTGCCGCCGGAGGTCGGGATGCTGCGAGAGGTGACGGTGTTCGACGTGAGCTTCAACCGGCTCGCCGGCCCGCTGCCGTCGGCGGTGGCCGGGATGAGGAAGGTGGAGCAGCTCGACGTCGCGCACAACCTGCTCACGGGGGCGATACCGCAGGCGGTGTGCGAGCTGCCGCGCCTCAAGAACTTCACCTTCGCGTACAACTTCTTCACCGGCGAGCCGCCGTCCTGCGCGCACGCCGTGCCGCGCTACGGCGACCGGAGGAACTGCCTGCCCAACCGCCCCGCCCAGCGGACGCTGCGGCAGTGCGCCGCGTTCTTCGCGCGCCCTCCCGTCAACTGCGCCGCGTTCCAGTGCAAGCCGTTCGTCCCGGCCCTGCCGCCACCATCGCCGCCACCACCATCACCGCCGCCGCCTTCGCCACCGCCGCCATCCCCACCGCCACCGTCGACATCACCGCCTCCGCCTTCACCACCACCGCCATCTCCACCGCCACCATCGCCTCCACCGCCTGCACCAATCTTCCACCCACCGCAGCCGCCGCCGCCGCCGCCACCACCCGCGCCACAACCGCATCCGCCATGTCCGGAGCTGCCGCCACCACCACCGCCGCCGCCACCCTGCGGCGGCGCAACACCAGCATTGTCACCACCACCACCACCACCTTACTACCCC  GGG CCATGGCCA CCTGTCCATGGAGTACCAT ATGGCTCACCACCACCT CCCCCTCTGCAACACCACAGCTCATGGCCACCGATCCACAGCGTACCATATGGATCACCACCTCCTCCCCCGCTGCATTGATAGAATTTCTCCGAAGAATGTTTGGAAACATGCATGTGTTCCGCTCTTGCTCCTCACATCCGGCAAATCGACAGCAGCGGAAGTCGCACACAAGTATACGTGGTCATTATCGTTCTTATTAGCTACTAGTGTTCTTGGTTGGTTGATTGATGACTACCGGCGTGAAGAGCGTAGTAAGGTGCACAAAATTTTGTTTGGTTATGATTTGTCGGCGTCAGCATCGAAACAGTTTGTGTTGCTGTGGTGTTGAAAGGGATTGGGAAGTGGTGGGGGTGTGGGGATTTGGAGGATTTGGGAACATATGATTGATGGCTAATTGGGTTGTGAATAATAAGGAAAAGTTTGAGAGGGACAGGAGGGTTTGGCAGAGGATTGTAGGTGCAGGGATATATGTGGTTGTATAGATGAGAATCATGAGTTCAGTTCAGTTAAATTCAGTAGTAGTAAGACATAAGTTTTAGAACAAAAGGATTCTGTGTCATTTCTTCCTGCTGTATCACAATTACTTCTGGCTATTCAATTCTTATTATTA                          ]
[+] EMBL C72292               [                             TCTCTCTCTCTCTCTTGAGTTCTTGGTTGATCGCCATTGCCGCGGAGGAGCTAGAGGAGATGAGATGAGGGGTGCGGGGTTTCTGCTGCTCGTTGTGTTCGCCGTTGCCGTCGCCGGTGGGGCGGTGGCGGCGGCGGCGGATTTGGACGGCGGCGATGGTGGTGGTGGTGTGGCGGCGGAGTGGCGGTTTCCGAGCTCGAGGATGCGGGACG GTACGTGGCGCTGCAGACGTGGAGGCGGGAGGCCATCTTCTCCGACCCCGGCAACCTCACCGCCGACTGGGTGGGCCCCGACGTGTGCAACTACAACGGCGTGTTCTTCGCGCCGNTGCCGTGGGATCGCCGGGAGGTCGCCGTCGCCGGCGGTCGACCTCAACCACGGCGACAATCGCCGGGTACCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU093943             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                acnTACCCCCGGGGCCCATGCCCACCCTGTCCATGGNGTCCCATAATGGCTCACCACCACCTCCCCCCTCTGCAACACCACAGCTCATGGCCACCGATCNACAGCGTACAATATGGATCACCACCTCCTCCCCCGCTGCATTGATAGAATTTCTCCGAAGAATNTTTGGAAACATGCATGTGTTCCGCTCTTGCTCCTCACATCCGGCAAATCGACAGCAGCGGAAGTCGCACACAAGTATACGTGGTCATTATCGTTCTTATTAGCTACTAGTGTTCTTGGTTGGTTGATTGATGACTACCGGCGTGAAGAGCGTAGTAAGGTGCACAAAATTTTGTTTGGTTATGATTTGTCGGCGTCAGCATCGAAACAGTTTGTGTTGCTGTGGTGTTGAAAGGGATTGGGAAGTGGTGGGGGTGTGGGGATTTGGAGGATTTGGGAACATATGATTGATGGCTAATTGGGTTGTGAATAATAAGGAAAAGTTTGAGAGGGACAGGAGGGTTTGGCAGAGGATTGTAGGTGCAGGGATATATGTGGTTGTATAGATGAGAATCATGAGTTCAGTTCAGTTAAATTCAGTAGTAGTAAGACATAAGTTTTAGAACAAAAGGATTCTGTGTCATTTCTTCCTGCTGTATCACAATTACTTCTGGCTATTCAATTCTTATTATTATTTAGTAAAAA               ]
[-] EMBL CF303054             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGCAAATCGACAGCAGCGGAAGTCGCACACAAGTATACGTGGTCATTATCGTTCTTATTAGCTACTAGTGTTCTTGGTTGGTTGATTGATGACTACCGGCGTGAAGAGCGTAGTAAGGTGCACAAAATTTTGTTTGGTTATGATTTGTCGGCGTCAGCATCGAAACAGTTTGTGTTGCTGTGGTGTTGAAAGGGATTGGGAAGTGGTGGGGGTGTGGGGATTTGGAGGATTTGGGAACATATGATTGATGGCTAATTGGGTTGTGAATAATAAGGAAAAGTTTGAGAGGGACAGGAGGGTTTGGCAGAGGATTGTAGGTGCAGGGATATATGTGGTTGTATAGATGAGAATCATGAGTTCAGTTCAGTTAAATTCAGTAGTAGTAAGACATAAGTTTTAGAACAAAAGGATTCTGTGTCATTTCTTCCTGCTGTATCACAATTACTTCTGGCTATTCAATTCTTATTATTATTTAAAAAAAAAAAAAAAAAACTCGA]
[+] EMBL OSC28521             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAGCGGAAGTCGCACACAAGTATACGNGGTCATTATCGTTCTTATTAGCTACTAGTGTTCTTGGTTGGTTGATTGATGACTACCGGCGTTAAGAGCGTAGTAAGGTGCACAAAATTTTGTTTGGTTATGATTTGTCGGCGTCA CATCGAAACAGTTTGTGTTGCTGTGGTGTTGAAAGGGATTTGGAAGTGGTGGGGGTGTGGGGATTTAGAGGATTTGGGAACATATGATTGATGGCTAATTGGGTTGTGAATAATAAGGAAAA                                                                                                                                                                                                                          ]


>consensus_8895#0 CTCCTTTCTCTCTCTAAACCTCTCTCTCCTCTCTCTCTCTCTCTTGAGTTCTTGGTTGAT CGCCATTGCCGCGGAGGAGCTAGAGGAGATGAGATGAGGGGTGCGGGGTTTCTGCTGCTC GTTGTGTTCGCCGTTGCCGTCGCCGGTGGGGCGGTGGCGGCGGCGGCGGATTTGGACGGC GGCGATGGTGGTGGTGGTGTGGCGGCGGAGTGGCGGTTTCCGAGCTCGAGGATGCGGGAC GCGTACGTGGCGCTGCAGACGTGGAGGCGGGAGGCCATCTTCTCCGACCCCGGCAACCTC ACCGCCGACTGGGTGGGCCCCGACGTGTGCAACTACACCGGCGTGTTCTGCGCGCCGCTG CCGTGGGATCGCCGGGAGGTCGCCGTCGCCGGCGTCGACCTCAACCACGGCGACATCGCC GGGTACCTGCCCCCCGAGCTCGGCCTGCTCGCCGACCTCGCGCTGCTCCACCTCAACTCC AACCGCTTCTGCGGCGTGCTCCCGGCCACCCTCCGCCGCCTCCGCCTCCTACACGAGCTC GACCTCAGCAACAACCGCTTCGTCGGGAGGTTCCCCGAGGTGGTGCTCGACATGCCCGCG CTCCGGTTCCTCGACCTCCGCTTCAACGACTTCGAGGGCGGGGTGCCCCGCCAGCTGTTC GACCGGCCGCTCGACGCCATCTTCCTCAACCACAACCGCTTCCGCTTCGACCTCCCGGAC AACTTCGGCAACTCGCCGGTCTCCGTCATCGTCCTCGCGCACAACAGCTTCGGCGGCTGC CTCCCGGCGAGCCTCGGCAACATGTCCGGGACGCTCAACGAGATCTTGCTCATCAACACG GGCCTCAGCTCCTGCCTGCCGCCGGAGGTCGGGATGCTGCGAGAGGTGACGGTGTTCGAC GTGAGCTTCAACCGGCTCGCCGGCCCGCTGCCGTCGGCGGTGGCCGGGATGAGGAAGGTG GAGCAGCTCGACGTCGCGCACAACCTGCTCACGGGGGCGATACCGCAGGCGGTGTGCGAG CTGCCGCGCCTCAAGAACTTCACCTTCGCGTACAACTTCTTCACCGGCGAGCCGCCGTCC TGCGCGCACGCCGTGCCGCGCTACGGCGACCGGAGGAACTGCCTGCCCAACCGCCCCGCC CAGCGGACGCTGCGGCAGTGCGCCGCGTTCTTCGCGCGCCCTCCCGTCAACTGCGCCGCG TTCCAGTGCAAGCCGTTCGTCCCGGCCCTGCCGCCACCATCGCCGCCACCACCATCACCG CCGCCGCCTTCGCCACCGCCGCCATCCCCACCGCCACCGTCGACATCACCGCCTCCGCCT TCACCACCACCGCCATCTCCACCGCCACCATCGCCTCCACCGCCTGCACCAATCTTCCAC CCACCGCAGCCGCCGCCGCCGCCGCCACCACCCGCGCCACAACCGCATCCGCCATGTCCG GAGCTGCCGCCACCACCACCGCCGCCGCCACCCTGCGGCGGCGCAACACCAGCATTGTCA CCACCACCACCACCACCTTACTACCCCGGGCCATGGCCACCTGTCCATGGAGTACCATAT GGCTCACCACCACCTCCCCCTCTGCAACACCACAGCTCATGGCCACCGATCCACAGCGTA CCATATGGATCACCACCTCCTCCCCCGCTGCATTGATAGAATTTCTCCGAAGAATGTTTG GAAACATGCATGTGTTCCGCTCTTGCTCCTCACATCCGGCAAATCGACAGCAGCGGAAGT CGCACACAAGTATACGTGGTCATTATCGTTCTTATTAGCTACTAGTGTTCTTGGTTGGTT GATTGATGACTACCGGCGTGAAGAGCGTAGTAAGGTGCACAAAATTTTGTTTGGTTATGA TTTGTCGGCGTCAGCATCGAAACAGTTTGTGTTGCTGTGGTGTTGAAAGGGATTGGGAAG TGGTGGGGGTGTGGGGATTTGGAGGATTTGGGAACATATGATTGATGGCTAATTGGGTTG TGAATAATAAGGAAAAGTTTGAGAGGGACAGGAGGGTTTGGCAGAGGATTGTAGGTGCAG GGATATATGTGGTTGTATAGATGAGAATCATGAGTTCAGTTCAGTTAAATTCAGTAGTAG TAAGACATAAGTTTTAGAACAAAAGGATTCTGTGTCATTTCTTCCTGCTGTATCACAATT ACTTCTGGCTATTCAATTCTTATTATTATTTAGTAAAAAAAAAAAAAAACTCGA



consensusID : consensus_8895#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 503
fasta sequence
                              [GTATACGTGTCATTATCGTTCTATTAGCTACTAGTGTTCTTGTTGTTGATTGATGACTACCGGCGTGAAGAGCTTAGTAAGGTGCACCAAATTTTGTTTGGTTATGATTTGTCGGCGTCAGCATCGAATACACGTTTGTGTTGCTGTGGTGTTGAAAGGGATTGGGAATGGTGGGGGTTGGGGATTTGGAGGATTTGGGAACATATGATTGATGGCTAATTGGGTTGTGAATAATAAGGAAAAGTTTGAGAGGGACACGGAGGGTTTGGCAGAGGATTGTAGGTGCAGGGATATATGTGGTTGTATAGATGAGAATCATGAGTTCAGTTCAGTTAAATTCAGTAGTAGTAAGACATAAGTTTTAGAACCAAAGGATTCTGTGTCATTTCTTCCTTCTGTATCACAATTACTTCTGGCTATTCAATTCTTATTATTATTTAGTATGGATTCTTGAGAGTTGTTCTTCTTATGTGTTGGATTGGATTTGTTCTCTAAAAAAAAAA]

[+] EMBL BI796336             [GTATACGTGTCATTATCGTTCTATTAGCTACTAGTGTTCTTGTTGTTGATTGATGACTACCGGCGTGAAGAGCTTAGTAAGGTGCACCAAATTTTGTTTGGTTATGATTTGTCGGCGTCAGCATCGAATACACGTTTGTGTTGCTGTGGTGTTGAAAGGGATTGGGAATGGTGGGGGTTGGGGATTTGGAGGATTTGGGAACATATGATTGATGGCTAATTGGGTTGTGAATAATAAGGAAAAGTTTGAGAGGGACACGGAGGGTTTGGCAGAGGATTGTAGGTGCAGGGATATATGTGGTTGTATAGATGAGAATCATGAGTTCAGTTCAGTTAAATTCAGTAGTAGTAAGACATAAGTTTTAGAACCAAAGGATTCTGTGTCATTTCTTCCTTCTGTATCACAATTACTTCTGGCTATTCAATTCTTATTATTATTTAGTATGGATTCTTGAGAGTTGTTCTTCTTATGTGTTGGATTGGATTTGTTCTCTAAAAAAAAAA]


>consensus_8895#1 GTATACGTGTCATTATCGTTCTATTAGCTACTAGTGTTCTTGTTGTTGATTGATGACTAC CGGCGTGAAGAGCTTAGTAAGGTGCACCAAATTTTGTTTGGTTATGATTTGTCGGCGTCA GCATCGAATACACGTTTGTGTTGCTGTGGTGTTGAAAGGGATTGGGAATGGTGGGGGTTG GGGATTTGGAGGATTTGGGAACATATGATTGATGGCTAATTGGGTTGTGAATAATAAGGA AAAGTTTGAGAGGGACACGGAGGGTTTGGCAGAGGATTGTAGGTGCAGGGATATATGTGG TTGTATAGATGAGAATCATGAGTTCAGTTCAGTTAAATTCAGTAGTAGTAAGACATAAGT TTTAGAACCAAAGGATTCTGTGTCATTTCTTCCTTCTGTATCACAATTACTTCTGGCTAT TCAATTCTTATTATTATTTAGTATGGATTCTTGAGAGTTGTTCTTCTTATGTGTTGGATT GGATTTGTTCTCTAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8895#0      CTCCTTTCTCTCTCTAAACCTCTCTCTCCTCTCTCTCTCTCTCTTGAGTTCTTGGTTGAT 60
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      CGCCATTGCCGCGGAGGAGCTAGAGGAGATGAGATGAGGGGTGCGGGGTTTCTGCTGCTC 120
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      GTTGTGTTCGCCGTTGCCGTCGCCGGTGGGGCGGTGGCGGCGGCGGCGGATTTGGACGGC 180
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      GGCGATGGTGGTGGTGGTGTGGCGGCGGAGTGGCGGTTTCCGAGCTCGAGGATGCGGGAC 240
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      GCGTACGTGGCGCTGCAGACGTGGAGGCGGGAGGCCATCTTCTCCGACCCCGGCAACCTC 300
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      ACCGCCGACTGGGTGGGCCCCGACGTGTGCAACTACACCGGCGTGTTCTGCGCGCCGCTG 360
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      CCGTGGGATCGCCGGGAGGTCGCCGTCGCCGGCGTCGACCTCAACCACGGCGACATCGCC 420
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      GGGTACCTGCCCCCCGAGCTCGGCCTGCTCGCCGACCTCGCGCTGCTCCACCTCAACTCC 480
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      AACCGCTTCTGCGGCGTGCTCCCGGCCACCCTCCGCCGCCTCCGCCTCCTACACGAGCTC 540
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      GACCTCAGCAACAACCGCTTCGTCGGGAGGTTCCCCGAGGTGGTGCTCGACATGCCCGCG 600
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      CTCCGGTTCCTCGACCTCCGCTTCAACGACTTCGAGGGCGGGGTGCCCCGCCAGCTGTTC 660
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      GACCGGCCGCTCGACGCCATCTTCCTCAACCACAACCGCTTCCGCTTCGACCTCCCGGAC 720
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      AACTTCGGCAACTCGCCGGTCTCCGTCATCGTCCTCGCGCACAACAGCTTCGGCGGCTGC 780
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      CTCCCGGCGAGCCTCGGCAACATGTCCGGGACGCTCAACGAGATCTTGCTCATCAACACG 840
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      GGCCTCAGCTCCTGCCTGCCGCCGGAGGTCGGGATGCTGCGAGAGGTGACGGTGTTCGAC 900
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      GTGAGCTTCAACCGGCTCGCCGGCCCGCTGCCGTCGGCGGTGGCCGGGATGAGGAAGGTG 960
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      GAGCAGCTCGACGTCGCGCACAACCTGCTCACGGGGGCGATACCGCAGGCGGTGTGCGAG 1020
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      CTGCCGCGCCTCAAGAACTTCACCTTCGCGTACAACTTCTTCACCGGCGAGCCGCCGTCC 1080
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      TGCGCGCACGCCGTGCCGCGCTACGGCGACCGGAGGAACTGCCTGCCCAACCGCCCCGCC 1140
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      CAGCGGACGCTGCGGCAGTGCGCCGCGTTCTTCGCGCGCCCTCCCGTCAACTGCGCCGCG 1200
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      TTCCAGTGCAAGCCGTTCGTCCCGGCCCTGCCGCCACCATCGCCGCCACCACCATCACCG 1260
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      CCGCCGCCTTCGCCACCGCCGCCATCCCCACCGCCACCGTCGACATCACCGCCTCCGCCT 1320
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      TCACCACCACCGCCATCTCCACCGCCACCATCGCCTCCACCGCCTGCACCAATCTTCCAC 1380
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      CCACCGCAGCCGCCGCCGCCGCCGCCACCACCCGCGCCACAACCGCATCCGCCATGTCCG 1440
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      GAGCTGCCGCCACCACCACCGCCGCCGCCACCCTGCGGCGGCGCAACACCAGCATTGTCA 1500
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      CCACCACCACCACCACCTTACTACCCCGGGCCATGGCCACCTGTCCATGGAGTACCATAT 1560
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      GGCTCACCACCACCTCCCCCTCTGCAACACCACAGCTCATGGCCACCGATCCACAGCGTA 1620
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      CCATATGGATCACCACCTCCTCCCCCGCTGCATTGATAGAATTTCTCCGAAGAATGTTTG 1680
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      GAAACATGCATGTGTTCCGCTCTTGCTCCTCACATCCGGCAAATCGACAGCAGCGGAAGT 1740
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#0      CGCACACAAGTATACGTGGTCATTATCGTTCTTATTAGCTACTAGTGTTCTTGGTTGGTT 1800
consensus_8895#1      ---------GTATACGTG-TCATTATCGTTCT-ATTAGCTACTAGTGTTCTTGTT--GTT 47
                               ********* ************* ******************** *  ***

consensus_8895#0      GATTGATGACTACCGGCGTGAAGAGCGTAGTAAGGTGCACAAAATTTTGTTTGGTTATGA 1860
consensus_8895#1      GATTGATGACTACCGGCGTGAAGAGCTTAGTAAGGTGCACCAAATTTTGTTTGGTTATGA 107
                      ************************** ************* *******************

consensus_8895#0      TTTGTCGGCGTCAGCATCGAA-ACA-GTTTGTGTTGCTGTGGTGTTGAAAGGGATTGGGA 1918
consensus_8895#1      TTTGTCGGCGTCAGCATCGAATACACGTTTGTGTTGCTGTGGTGTTGAAAGGGATTGGGA 167
                      ********************* *** **********************************

consensus_8895#0      AGTGGTGGGGGTGTGGGGATTTGGAGGATTTGGGAACATATGATTGATGGCTAATTGGGT 1978
consensus_8895#1      A-TGGTGGGGGT-TGGGGATTTGGAGGATTTGGGAACATATGATTGATGGCTAATTGGGT 225
                      * ********** ***********************************************

consensus_8895#0      TGTGAATAATAAGGAAAAGTTTGAGAGGGACA-GGAGGGTTTGGCAGAGGATTGTAGGTG 2037
consensus_8895#1      TGTGAATAATAAGGAAAAGTTTGAGAGGGACACGGAGGGTTTGGCAGAGGATTGTAGGTG 285
                      ******************************** ***************************

consensus_8895#0      CAGGGATATATGTGGTTGTATAGATGAGAATCATGAGTTCAGTTCAGTTAAATTCAGTAG 2097
consensus_8895#1      CAGGGATATATGTGGTTGTATAGATGAGAATCATGAGTTCAGTTCAGTTAAATTCAGTAG 345
                      ************************************************************

consensus_8895#0      TAGTAAGACATAAGTTTTAGAACAAAAGGATTCTGTGTCATTTCTTCCTGCTGTATCACA 2157
consensus_8895#1      TAGTAAGACATAAGTTTTAGAACCAAAGGATTCTGTGTCATTTCTTCCTTCTGTATCACA 405
                      *********************** ************************* **********

consensus_8895#0      ATTACTTCTGGCTATTCAATTCTTATTATTATTTAGTAAAAAAAAAAAAAAACTCGA--- 2214
consensus_8895#1      ATTACTTCTGGCTATTCAATTCTTATTATTATTTAGTATGGATTCTTGAGAGTTGTTCTT 465
                      **************************************   *      * *  *      

consensus_8895#0      --------------------------------------
consensus_8895#1      CTTATGTGTTGGATTGGATTTGTTCTCTAAAAAAAAAA 503
                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)