Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8898 cluster # 8898       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8898#0 length = 2059 sequences # 4  
consensus_8898#1 length = 432 sequences # 1  
consensus_8898#2 length = 221 sequences # 1  

consensusID : consensus_8898#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2059
fasta sequence
                              [GCGAGCGCGACACACACAGAGGAGGAGGCCGCGCGCGCGACGCGAGCTCGCCCTCTGCGTGCGCCGCCGCGAGGTCGCCGCCGCCGCCGCCGCCGTCGATCGGCGCCCGATCGATGGGGAGCTGCTACTCCGCCTACGCCTCCTCGCGCAAGCTGCGCGGCCGCATCAGCAAGATCTCCCTCGTCATCCCCGACCCGGTCCCCGACGCCGAGGCCGCCTCGCCGCGCAAGGACGGCGTCGATGGCGACGGCGACGACGTGAGGGGTGGTGGTGGTGGCTGTGACGATGGCGGTGACGTCGTCGCCATCGCGACGACGACGGCGGACGAGTTCGCGCGGCGGTACGTGCTGGGGAAGGAGCTGGGGCGCGGGGAGTTCGGGGTGACGCGGCGGTGCAGCGACGCGGCGACCGGGGAGGCGCTGGCGTGCAAGACGATCCGGAAGCACAGGCGCCTGGCGCCGCCGCGGGTGACCGCGGCGAAGGCGGCGGCCGCGCACGGGGAGGACGTGAAGAGGGAGGTGGCCATCATGCGGCGCATGTCGTCGGCGTCGTCGTCGCGCGGGGGCGGCGCCGCGTCGTCCGCCGCCGTGGTGCGGCTCCGCGAGGCATGCGAGGACGCCGCCGACGGCTCCGTCCACCTCGTCATGGAGCTCTGCGAGGGCGGCGAGCTGTTCGACCGCATCGTGGCGCGCGGACACTACTCCGAGCGCGCCGCCGCCAACATCTTCCGCACCATCGTCGACGTCGTCCAGCTGTGCCACTCGAACGGGGTGATACACCGCGATCTGAAGCCGGAGAACTTCCTGTTCGCGAACAAATCGGAGGACTCGCCGCTCAAGGTCATCGACTTCGGCCTCTCGGTGTTCTTCAAGCCAGGCGACCGGTTCACGGAGGTGGTGGGGAGCGCGTACTACATGGCGCCGGAGGTATTGCGGCGGAGCT-ACGGGCCGGAGGT-GGACGTGTGGAGCGCCGGCGTCATCCTCT-ACATCCTCCTCT-GCGGCGTCCCTCCATTCTGGGGAGACAACGACGAGAAGATCGCGCAGGCGATCCTCCGCGGCGCCATCGACTTCAACAGGGAGCCATTGCCGAGGGTCTCCGCCAACGCCAAGGACCTCGTCAGGAGGATGCTTGATCCTAACCCATCCACCCGCCTGACGGCCAAACAAGTTCTTGAGCATCCATGGCTGAAGAACGCGGACACGGCGCCGAACGTGTCGCTGGGCGACGCCGTGCGGGCGAGGCTGCAGCAGTTCTCCGCCATGAACAAGTTCAAGAAGAAGGCTCTCGGAGTGGTGGCGCGGAACCTGCCGGGGGAGGAGGTGGACAAGTACGTGCAGATGTTCCACCACATGGACAAGGACAAGAACGGGCACCTGTCGCTCGACGAACTCTTGGAAGGCCTCCACATCAACGGCCAGCCCGTCCCCGAGCCCGAGATCAGGATGCTACTCGAAGCCGCGGACACGGACGGGAACGGGACGCTGGACTGCGACGAGTTCGTGACGGTGTCGGTGCACCTGAAGAAGATGAGCAACGACGAGTACCTGGCGGCGGCGTTCAACTACTTCGACAAGGACGGCAGCGGGTTCATCGAGCTGGACGAGCTGCGGGAGGAGGTGGGCCCAAACGAGCAGGCCATCCTGGAGATCCTCCGCGACGTCGACACCGACAAGGACGGCCGCATCAGCTACCAGGAGTTCGAGCTCATGATGAAGTCCGGCGCCGACTGGAGGAACGCCTCCAGGCACTTCTCCAGGGCCAACTTCAGCACCCTCAGCAGGAGGCTCTGCAAGGATACTCTTACTCCCTGATGATCGATGATGCCCAACAATCTCATCAACTTTGTTTCATCAAGGCTTATAAACTGCACATCTTTCACCTTCACCAGACAGGGATAACTAGAGAGAGATACAAGACCAACTTAGAGAAATGTATTGGAGTGGCAACACGATGCGATGCTGCGCTTGGATTGTGAAATGAGAAATGGAACTGAAATGGGGATCGTACCGGTTTTGCTAAAAAAACGGTAAATGGGTATTTTTNTTTTGAAAAANANANC]

[+] EMBL AK103306             [GCGAGCGCGACACACACAGAGGAGGAGGCCGCGCGCGCGACGCGAGCTCGCCCTCTGCGTGCGCCGCCGCGAGGTCGCCGCCGCCGCCGCCGCCGTCGATCGGCGCCCGATCGATGGGGAGCTGCTACTCCGCCTACGCCTCCTCGCGCAAGCTGCGCGGCCGCATCAGCAAGATCTCCCTCGTCATCCCCGACCCGGTCCCCGACGCCGAGGCCGCCTCGCCGCGCAAGGACGGCGTCGATGGCGACGGCGACGACGTGAGGGGTGGTGGTGGTGGCTGTGACGATGGCGGTGACGTCGTCGCCATCGCGACGACGACGGCGGACGAGTTCGCGCGGCGGTACGTGCTGGGGAAGGAGCTGGGGCGCGGGGAGTTCGGGGTGACGCGGCGGTGCAGCGACGCGGCGACCGGGGAGGCGCTGGCGTGCAAGACGATCCGGAAGCACAGGCGCCTGGCGCCGCCGCGGGTGACCGCGGCGAAGGCGGCGGCCGCGCACGGGGAGGACGTGAAGAGGGAGGTGGCCATCATGCGGCGCATGTCGTCGGCGTCGTCGTCGCGCGGGGGCGGCGCCGCGTCGTCCGCCGCCGTGGTGCGGCTCCGCGAGGCATGCGAGGACGCCGCCGACGGCTCCGTCCACCTCGTCATGGAGCTCTGCGAGGGCGGCGAGCTGTTCGACCGCATCGTGGCGCGCGGACACTACTCCGAGCGCGCCGCCGCCAACATCTTCCGCACCATCGTCGACGTCGTCCAGCTGTGCCACTCGAACGGGGTGATACACCGCGATCTGAAGCCGGAGAACTTCCTGTTCGCGAACAAATCGGAGGACTCGCCGCTCAAGGTCATCGACTTCGGCCTCTCGGTGTTCTTCAAGCCAGGCGACCGGTTCACGGAGGTGGTGGGGAGCGCGTACTACATGGCGCCGGAGGTATTGCGGCGGAGCT ACGGGCCGGAGGT GGACGTGTGGAGCGCCGGCGTCATCCTCT ACATCCTCCTCT GCGGCGTCCCTCCATTCTGGGGAGACAACGACGAGAAGATCGCGCAGGCGATCCTCCGCGGCGCCATCGACTTCAACAGGGAGCCATTGCCGAGGGTCTCCGCCAACGCCAAGGACCTCGTCAGGAGGATGCTTGATCCTAACCCATCCACCCGCCTGACGGCCAAACAAGTTCTTGAGCATCCATGGCTGAAGAACGCGGACACGGCGCCGAACGTGTCGCTGGGCGACGCCGTGCGGGCGAGGCTGCAGCAGTTCTCCGCCATGAACAAGTTCAAGAAGAAGGCTCTCGGAGTGGTGGCGCGGAACCTGCCGGGGGAGGAGGTGGACAAGTACGTGCAGATGTTCCACCACATGGACAAGGACAAGAACGGGCACCTGTCGCTCGACGAACTCTTGGAAGGCCTCCACATCAACGGCCAGCCCGTCCCCGAGCCCGAGATCAGGATGCTACTCGAAGCCGCGGACACGGACGGGAACGGGACGCTGGACTGCGACGAGTTCGTGACGGTGTCGGTGCACCTGAAGAAGATGAGCAACGACGAGTACCTGGCGGCGGCGTTCAACTACTTCGACAAGGACGGCAGCGGGTTCATCGAGCTGGACGAGCTGCGGGAGGAGGTGGGCCCAAACGAGCAGGCCATCCTGGAGATCCTCCGCGACGTCGACACCGACAAGGACGGCCGCATCAGCTACCAGGAGTTCGAGCTCATGATGAAGTCCGGCGCCGACTGGAGGAACGCCTCCAGGCACTTCTCCAGGGCCAACTTCAGCACCCTCAGCAGGAGGCTCTGCAAGGATACTCTTACTCCCTGATGATCGATGATGCCCAACAATCTCATCAACTTTGTTTCATCAAGGCTTATAAACTGCACATCTTTCACCTTCACCAGACAGGGATAACTAGAGAGAGATACAAGACCAACTTAGAGAAATGTATTGGAGTGGCAACACGATGCGATGCTGCGCTTGGATTGTGAAATGAGAAATGGAACTGAAATGGGGATCGTAC                                                    ]
[+] EMBL C22387               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCGCCGACGGCTCCGTCCACCTCGTCATGGAGCTCTGCGAGGGCGGCGAGCTGTTCGACCGCATCGTGGCGCGCGGACACTACTCCGAGCGCGCCGCCGCCAACATCTTCCGCACCATCGTCGACGTCGTCCAGCTGTGCCACTCGAACGGGGTGATACACCGCGATCTGAAGCCGGAGAACTTCCTGTTCGCGAACAAATCGGAGGACTCGCCGCTCAAGGTCATCGACTTCGGCCTCTCGGTGTTCTTCAAGCCAGGCGACCGGTTCACGGAGGTGGTGGGGAGCGCGTACTACATGGCGCCGGAGGTATTGCGGCGGAGCTAACGGGCCGGAGGTGGGACGTGTGGAGCGCCGGCGTCATCCTCTAACATCCTCCTCTGGCGGCGTCCCTCCATTCTGGGGAGACAACGACGAGAAGATCGCGCAGGCGATCCTCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C22388               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGCGGGTTCATCGAGCTGGACGAGCTGCGGGAGGAGGTGGGCCCAAACGAGCAGGCCATCCTGGAGATCCTCCGCGACGTCGACACCGACAAGGACGGCCGCATCAGCTACCAGGAGTTCGAGCTCATGATGAAGTCCGGCGCCGACTGGAGGAACGCCTCCAGGCACTTCTCCAGGGCCAACTTCAGCACCCTCAGCAGGAGGCTCTGCAAGGATACTCTTACTCCCTGATGATCGATGATGCCCAACAATCTCATCAACTTTGTTTCATCAAGGCTTATAAACTGCACATCTTTCACCTTCACCAGACAGGGATAACTAGAGAGAGATACAAGACCAACTTAGAGAAATGTATTGGAGTGGCAACACGATGCGATG TGCGCTTGGATTGTGAAATGAGAAATGGAACTGAAATGGGGATCGTACCGGTTTTGCTAAAAAAA                                   ]
[-] EMBL C97040               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCGANAAGGACGGCCGCATCAGCTACCAGGAGTTCGAGCTCATGATGAAGTCCGGCGCCGACTGGAGGAACGCCTCCAGGCACTTCTCCAGGGCCAACTTCAGCACCCTCAGCAGGAGGCTCTGCAAGGATACTCTTACTCCCTGATGATCGATGATGCCCAACAATCTCATCAACTTTGTTTCATCAAGGCTTATAAACTGCACATCTTTCACCTTCACCAGACAGGGATAACTAGAGAGAGATACAAGACCAACTTAGAGAAATGTATTGGAGTGGCAACACGATGCGAT NTGCGCTTGGATTGTGAAATGAGAAATGGAACTGAAATGGGGATCGTACCGGTTTTGCTACTCTTTCGGTAAATGGGTATTTTTNTTTTGAAAAANANANC]


>consensus_8898#0 GCGAGCGCGACACACACAGAGGAGGAGGCCGCGCGCGCGACGCGAGCTCGCCCTCTGCGT GCGCCGCCGCGAGGTCGCCGCCGCCGCCGCCGCCGTCGATCGGCGCCCGATCGATGGGGA GCTGCTACTCCGCCTACGCCTCCTCGCGCAAGCTGCGCGGCCGCATCAGCAAGATCTCCC TCGTCATCCCCGACCCGGTCCCCGACGCCGAGGCCGCCTCGCCGCGCAAGGACGGCGTCG ATGGCGACGGCGACGACGTGAGGGGTGGTGGTGGTGGCTGTGACGATGGCGGTGACGTCG TCGCCATCGCGACGACGACGGCGGACGAGTTCGCGCGGCGGTACGTGCTGGGGAAGGAGC TGGGGCGCGGGGAGTTCGGGGTGACGCGGCGGTGCAGCGACGCGGCGACCGGGGAGGCGC TGGCGTGCAAGACGATCCGGAAGCACAGGCGCCTGGCGCCGCCGCGGGTGACCGCGGCGA AGGCGGCGGCCGCGCACGGGGAGGACGTGAAGAGGGAGGTGGCCATCATGCGGCGCATGT CGTCGGCGTCGTCGTCGCGCGGGGGCGGCGCCGCGTCGTCCGCCGCCGTGGTGCGGCTCC GCGAGGCATGCGAGGACGCCGCCGACGGCTCCGTCCACCTCGTCATGGAGCTCTGCGAGG GCGGCGAGCTGTTCGACCGCATCGTGGCGCGCGGACACTACTCCGAGCGCGCCGCCGCCA ACATCTTCCGCACCATCGTCGACGTCGTCCAGCTGTGCCACTCGAACGGGGTGATACACC GCGATCTGAAGCCGGAGAACTTCCTGTTCGCGAACAAATCGGAGGACTCGCCGCTCAAGG TCATCGACTTCGGCCTCTCGGTGTTCTTCAAGCCAGGCGACCGGTTCACGGAGGTGGTGG GGAGCGCGTACTACATGGCGCCGGAGGTATTGCGGCGGAGCTACGGGCCGGAGGTGGACG TGTGGAGCGCCGGCGTCATCCTCTACATCCTCCTCTGCGGCGTCCCTCCATTCTGGGGAG ACAACGACGAGAAGATCGCGCAGGCGATCCTCCGCGGCGCCATCGACTTCAACAGGGAGC CATTGCCGAGGGTCTCCGCCAACGCCAAGGACCTCGTCAGGAGGATGCTTGATCCTAACC CATCCACCCGCCTGACGGCCAAACAAGTTCTTGAGCATCCATGGCTGAAGAACGCGGACA CGGCGCCGAACGTGTCGCTGGGCGACGCCGTGCGGGCGAGGCTGCAGCAGTTCTCCGCCA TGAACAAGTTCAAGAAGAAGGCTCTCGGAGTGGTGGCGCGGAACCTGCCGGGGGAGGAGG TGGACAAGTACGTGCAGATGTTCCACCACATGGACAAGGACAAGAACGGGCACCTGTCGC TCGACGAACTCTTGGAAGGCCTCCACATCAACGGCCAGCCCGTCCCCGAGCCCGAGATCA GGATGCTACTCGAAGCCGCGGACACGGACGGGAACGGGACGCTGGACTGCGACGAGTTCG TGACGGTGTCGGTGCACCTGAAGAAGATGAGCAACGACGAGTACCTGGCGGCGGCGTTCA ACTACTTCGACAAGGACGGCAGCGGGTTCATCGAGCTGGACGAGCTGCGGGAGGAGGTGG GCCCAAACGAGCAGGCCATCCTGGAGATCCTCCGCGACGTCGACACCGACAAGGACGGCC GCATCAGCTACCAGGAGTTCGAGCTCATGATGAAGTCCGGCGCCGACTGGAGGAACGCCT CCAGGCACTTCTCCAGGGCCAACTTCAGCACCCTCAGCAGGAGGCTCTGCAAGGATACTC TTACTCCCTGATGATCGATGATGCCCAACAATCTCATCAACTTTGTTTCATCAAGGCTTA TAAACTGCACATCTTTCACCTTCACCAGACAGGGATAACTAGAGAGAGATACAAGACCAA CTTAGAGAAATGTATTGGAGTGGCAACACGATGCGATGCTGCGCTTGGATTGTGAAATGA GAAATGGAACTGAAATGGGGATCGTACCGGTTTTGCTAAAAAAACGGTAAATGGGTATTT TTNTTTTGAAAAANANANC



consensusID : consensus_8898#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 432
fasta sequence
                              [CGAACTGGACGACCTTCGGAAGAGGTGGNCCCAAACGAGCAGGCCATCCTGGANATCCTCCGCGACGTCGACACCGANAAAGGACGGCCGCATCAGCTACCCAGGAGTTCGAGCTCATGATGAANTCCGGCGCCGACTGGAGGAACGCCTCCAGGCACTTCTCCAGGGCCAACTTCAGCACCCTCANCAGGAGGCTCTGCAAGGATACTCTTACTCCCTGATGANCGATGATGCCCAANAATCTCATCAACTTTGTTTCATCAAGGCTTNTAAACTGCACATNTTTCACCTTCACCAGACAGGGATAACTAGAGAGAGATACAAGACCAACTTANAGAAATGTATTGGAGTGGCAACNCGATNCGATTCTGCGCTTGGATTNTGAAATGAGAAATGGAACTGAAATGAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU161414             [CGAACTGGACGACCTTCGGAAGAGGTGGNCCCAAACGAGCAGGCCATCCTGGANATCCTCCGCGACGTCGACACCGANAAAGGACGGCCGCATCAGCTACCCAGGAGTTCGAGCTCATGATGAANTCCGGCGCCGACTGGAGGAACGCCTCCAGGCACTTCTCCAGGGCCAACTTCAGCACCCTCANCAGGAGGCTCTGCAAGGATACTCTTACTCCCTGATGANCGATGATGCCCAANAATCTCATCAACTTTGTTTCATCAAGGCTTNTAAACTGCACATNTTTCACCTTCACCAGACAGGGATAACTAGAGAGAGATACAAGACCAACTTANAGAAATGTATTGGAGTGGCAACNCGATNCGATTCTGCGCTTGGATTNTGAAATGAGAAATGGAACTGAAATGAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_8898#1 CGAACTGGACGACCTTCGGAAGAGGTGGNCCCAAACGAGCAGGCCATCCTGGANATCCTC CGCGACGTCGACACCGANAAAGGACGGCCGCATCAGCTACCCAGGAGTTCGAGCTCATGA TGAANTCCGGCGCCGACTGGAGGAACGCCTCCAGGCACTTCTCCAGGGCCAACTTCAGCA CCCTCANCAGGAGGCTCTGCAAGGATACTCTTACTCCCTGATGANCGATGATGCCCAANA ATCTCATCAACTTTGTTTCATCAAGGCTTNTAAACTGCACATNTTTCACCTTCACCAGAC AGGGATAACTAGAGAGAGATACAAGACCAACTTANAGAAATGTATTGGAGTGGCAACNCG ATNCGATTCTGCGCTTGGATTNTGAAATGAGAAATGGAACTGAAATGAAAAAAAAAAAAA AAAAAAAAAAAA



consensusID : consensus_8898#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 221
fasta sequence
                              [CTCCAGGGCCAACTTCAGCACCCTCAGCAGAAGCTCTNNAAGGATACTCTTACTCCCTGATGATCGATGGTGCCCAACAATCTCATCAACTTTGTTTCATCAAGGCTTATAAACTGCACATCTTTCACCTTCTACCAGACAGGATAACTAGAGAGAGATACAAGACCAACTTAGAGAAATGTATTGGAGTGGCAACACNATGNACTNNCTTNNATTGTNAA]

[-] EMBL D42449               [CTCCAGGGCCAACTTCAGCACCCTCAGCAGAAGCTCTNNAAGGATACTCTTACTCCCTGATGATCGATGGTGCCCAACAATCTCATCAACTTTGTTTCATCAAGGCTTATAAACTGCACATCTTTCACCTTCTACCAGACAGGATAACTAGAGAGAGATACAAGACCAACTTAGAGAAATGTATTGGAGTGGCAACACNATGNACTNNCTTNNATTGTNAA]


>consensus_8898#2 CTCCAGGGCCAACTTCAGCACCCTCAGCAGAAGCTCTNNAAGGATACTCTTACTCCCTGA TGATCGATGGTGCCCAACAATCTCATCAACTTTGTTTCATCAAGGCTTATAAACTGCACA TCTTTCACCTTCTACCAGACAGGATAACTAGAGAGAGATACAAGACCAACTTAGAGAAAT GTATTGGAGTGGCAACACNATGNACTNNCTTNNATTGTNAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8898#0      GCGAGCGCGACACACACAGAGGAGGAGGCCGCGCGCGCGACGCGAGCTCGCCCTCTGCGT 60
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      GCGCCGCCGCGAGGTCGCCGCCGCCGCCGCCGCCGTCGATCGGCGCCCGATCGATGGGGA 120
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      GCTGCTACTCCGCCTACGCCTCCTCGCGCAAGCTGCGCGGCCGCATCAGCAAGATCTCCC 180
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      TCGTCATCCCCGACCCGGTCCCCGACGCCGAGGCCGCCTCGCCGCGCAAGGACGGCGTCG 240
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      ATGGCGACGGCGACGACGTGAGGGGTGGTGGTGGTGGCTGTGACGATGGCGGTGACGTCG 300
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      TCGCCATCGCGACGACGACGGCGGACGAGTTCGCGCGGCGGTACGTGCTGGGGAAGGAGC 360
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      TGGGGCGCGGGGAGTTCGGGGTGACGCGGCGGTGCAGCGACGCGGCGACCGGGGAGGCGC 420
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      TGGCGTGCAAGACGATCCGGAAGCACAGGCGCCTGGCGCCGCCGCGGGTGACCGCGGCGA 480
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      AGGCGGCGGCCGCGCACGGGGAGGACGTGAAGAGGGAGGTGGCCATCATGCGGCGCATGT 540
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      CGTCGGCGTCGTCGTCGCGCGGGGGCGGCGCCGCGTCGTCCGCCGCCGTGGTGCGGCTCC 600
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      GCGAGGCATGCGAGGACGCCGCCGACGGCTCCGTCCACCTCGTCATGGAGCTCTGCGAGG 660
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      GCGGCGAGCTGTTCGACCGCATCGTGGCGCGCGGACACTACTCCGAGCGCGCCGCCGCCA 720
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      ACATCTTCCGCACCATCGTCGACGTCGTCCAGCTGTGCCACTCGAACGGGGTGATACACC 780
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      GCGATCTGAAGCCGGAGAACTTCCTGTTCGCGAACAAATCGGAGGACTCGCCGCTCAAGG 840
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      TCATCGACTTCGGCCTCTCGGTGTTCTTCAAGCCAGGCGACCGGTTCACGGAGGTGGTGG 900
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      GGAGCGCGTACTACATGGCGCCGGAGGTATTGCGGCGGAGCTACGGGCCGGAGGTGGACG 960
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      TGTGGAGCGCCGGCGTCATCCTCTACATCCTCCTCTGCGGCGTCCCTCCATTCTGGGGAG 1020
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      ACAACGACGAGAAGATCGCGCAGGCGATCCTCCGCGGCGCCATCGACTTCAACAGGGAGC 1080
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      CATTGCCGAGGGTCTCCGCCAACGCCAAGGACCTCGTCAGGAGGATGCTTGATCCTAACC 1140
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      CATCCACCCGCCTGACGGCCAAACAAGTTCTTGAGCATCCATGGCTGAAGAACGCGGACA 1200
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      CGGCGCCGAACGTGTCGCTGGGCGACGCCGTGCGGGCGAGGCTGCAGCAGTTCTCCGCCA 1260
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      TGAACAAGTTCAAGAAGAAGGCTCTCGGAGTGGTGGCGCGGAACCTGCCGGGGGAGGAGG 1320
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      TGGACAAGTACGTGCAGATGTTCCACCACATGGACAAGGACAAGAACGGGCACCTGTCGC 1380
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      TCGACGAACTCTTGGAAGGCCTCCACATCAACGGCCAGCCCGTCCCCGAGCCCGAGATCA 1440
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      GGATGCTACTCGAAGCCGCGGACACGGACGGGAACGGGACGCTGGACTGCGACGAGTTCG 1500
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      TGACGGTGTCGGTGCACCTGAAGAAGATGAGCAACGACGAGTACCTGGCGGCGGCGTTCA 1560
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      ACTACTTCGACAAGGACGGCAGCGGGTTCATCGAGCTGGACGAGCTGCGGGAGGAGGTGG 1620
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      -------------------------------CGAACTGGACGACCTTCGGAAG-AGGTGG 28
                                                                                  

consensus_8898#0      GCCCAAACGAGCAGGCCATCCTGGAGATCCTCCGCGACGTCGACACCGACAA-GGACGGC 1679
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      NCCCAAACGAGCAGGCCATCCTGGANATCCTCCGCGACGTCGACACCGANAAAGGACGGC 88
                                                                                  

consensus_8898#0      CGCATCAGCTACC-AGGAGTTCGAGCTCATGATGAAGTCCGGCGCCGACTGGAGGAACGC 1738
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      CGCATCAGCTACCCAGGAGTTCGAGCTCATGATGAANTCCGGCGCCGACTGGAGGAACGC 148
                                                                                  

consensus_8898#0      CTCCAGGCACTTCTCCAGGGCCAACTTCAGCACCCTCAGCAGGAGGCTCTGCAAGGATAC 1798
consensus_8898#2      ------------CTCCAGGGCCAACTTCAGCACCCTCAGCAGAAG-CTCTNNAAGGATAC 47
consensus_8898#1      CTCCAGGCACTTCTCCAGGGCCAACTTCAGCACCCTCANCAGGAGGCTCTGCAAGGATAC 208
                                  ************************** *** ** ****  ********

consensus_8898#0      TCTTACTCCCTGATGATCGATGATGCCCAACAATCTCATCAACTTTGTTTCATCAAGGCT 1858
consensus_8898#2      TCTTACTCCCTGATGATCGATGGTGCCCAACAATCTCATCAACTTTGTTTCATCAAGGCT 107
consensus_8898#1      TCTTACTCCCTGATGANCGATGATGCCCAANAATCTCATCAACTTTGTTTCATCAAGGCT 268
                      **************** ***** ******* *****************************

consensus_8898#0      TATAAACTGCACATCTTTCACCTTC-ACCAGACAGGGATAACTAGAGAGAGATACAAGAC 1917
consensus_8898#2      TATAAACTGCACATCTTTCACCTTCTACCAGACAGG-ATAACTAGAGAGAGATACAAGAC 166
consensus_8898#1      TNTAAACTGCACATNTTTCACCTTC-ACCAGACAGGGATAACTAGAGAGAGATACAAGAC 327
                      * ************ ********** ********** ***********************

consensus_8898#0      CAACTTAGAGAAATGTATTGGAGTGGCAACACGATGCGATGCTGCGCTTGGATTGTGAAA 1977
consensus_8898#2      CAACTTAGAGAAATGTATTGGAGTGGCAACACNATGNACTN----NCTTNNATTGTNAA- 221
consensus_8898#1      CAACTTANAGAAATGTATTGGAGTGGCAACNCGATNCGATTCTGCGCTTGGATTNTGAAA 387
                      ******* ********************** * **    *      ***  *** * ** 

consensus_8898#0      TGAGAAATGGAACTGAAATGGGGATCGTACCGGTTTTGCTAAAAAAACGGTAAATGGGTA 2037
consensus_8898#2      ------------------------------------------------------------
consensus_8898#1      TGAGAAATGGAACTGAAATGAAAAAAAAAAAAAAAAAAAAAAAAA--------------- 432
                                                                                  

consensus_8898#0      TTTTTNTTTTGAAAAANANANC 2059
consensus_8898#2      ----------------------
consensus_8898#1      ----------------------
                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)