These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8899#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1953 fasta sequence [GCATCGTTCGTTCGTTGCAAACAGCAGCTAGTACGTGTTCGATCGTTGCATGCACGACGCAAACATGGCCATGTCGTCGCGAAGCTTAGGCGCCCTAGCCGCCTTCGTCTTCCTCTGCTCAGCTGCCTCCATGTCGTCCTCCATGGCCGCCACGGACAGCTTCCTCCAATGCCTCTCGGCGAGCATACCCAGCCAGCTCCTGTACACGCAGAGCTCGCCGTCGTACACGTCGGTGCTGGACGCCGGCATCCGGAACCCTAAGTTCCTGACGAACACCACGCGGCCGGTCTGGATCATCACGCCGACGAACGCCTCCCACGTCCAGGCCGCCGTGCTCTGCGGCCGCCGGAACGGCGTCCGCCTCCGCATCCGCAGCGGCGGGCACGACTACGAGGGCCTCTCGTACAGGTCGGAGCGGCCGGAGACGTTCGCCGTGCTCGACCTCGTCAACATCCGCGCCGTCCGCGTCGACGCGGCGTCCGCCACCGCGTGGGTGGACTCCGGCGCGACGCTCGGGGAGATGTACTACGCCATCGGGAAGGCCGGCGGCCGGATCGCGTTCCCGGCCGGCCTGTGTCCGACCGTCGGCGTCGGCGGCCACTTCAGCGGCGGCGGCTTCGGCATGCTGCTCCGCAAGTACGGCCTCGCCGCCGACAACGTCGTCGACGCCGTCCTCGTGGACGCCAAGGGCAGGCTCCTCGACAAGAACTCCATGGGCAGCGACGTCTTCTGGGCGCTCCGCGGCGGCGCCGGCGAGAGCTTCGGGATCGTGCTCTCCTGGAAGGTGAAGCTCGTGGCCGTGCCGCCGACCGTCACGGTGTTCAACGTCCCGGTGACCGTGAGCCAGGGCGCCATCGACGTCGTCACGAGGTGGCAGGCCGTCGCGCCGTCGCTCCCCGACGACCTGTTCATCCGCGTGCTCGTCCAGGGCCAGAGGGCCAGCTTCCAGTCCCTCTACCTCGGCACCTGCGACGCGCTGCTGCCGGTGATGCGCAGCCGCTTCCCGGAGCTCGGCATGAACCGGTCGGACTGCAGGGAGATGACTTGGATCCAGTCCGTCCCCTACATCTACCTCGGCAGCAGCGCCACCGTGGAGGACATCCTGAACCGGACCATCGCCATGGACACCTCCAACAAGGCCACCTCCGACTACGTCCGGCAAGCCATCGGCAGGGACACGTGGAGCGCCATCTTCGGGTGGCTCGCGCGGCCCAACGCCGGGCTGATGATCCTGGACCCGTACGGCGGGCAGATCGGCAGCGTGGCGGAGGCGGCGACGCCGTTCCCGCACCGCGGCGGCGTGCTCTACAACATCCAGTACATGAACTTCTGGAGCGCGGCGGGCGGAGGCGGCGGCGGCGCGGCGCAGAGGGCGTGGATCAGGGACTTCTACGCGTTCATGGCGCCGTTCGTGAGCAAGGACCCGAGGGAGGCGTACGCCAACTACAGGGACCTGGACCTCGGCGAGAACGTGGTCGGCGCCGGCGGCGTCAGCAGCTACGACGCCGGCAAGGTGTGGGGGGAGAAGTACTTCAGGGGGAACTACCAGCGGCTCGCCATGGCCAAGGCGCAGATCGACGCCGACGACTACTTCAGGAACGAGCAGAGCATCCCGCCACTTGTCGCCGGAAAATGACGAGCCAATTCAAATGTAGCATGGCCTACTCCCTCCGTCACATAAAAAATAATCTAGTGCCGGATATAATTAGGAAGTATCAGATTTAATACTAAATTAGTTTTTTATGAGATGGAGGGAGTAGTGCATGGCAGACAGTCAAACTAATAGCTGTAAAAATCTTTGGTCATGTGTAAAGATGCGTGGTGTATAGGGTAGCTACGCCGTCTATATGTTTGAAAATTCATCACTGTACTTATCTTTTTTTTCTTCCAATTGTATTTTGTGGTGCGGATCGATGTACTATCTTTCACATAAGCTGAGCTTATTGCGTGCTC] [+] EMBL AK109673 [GCATCGTTCGTTCGTTGCAAACAGCAGCTAGTACGTGTTCGATCGTTGCATGCACGACGCAAACATGGCCATGTCGTCGCGAAGCTTAGGCGCCCTAGCCGCCTTCGTCTTCCTCTGCTCAGCTGCCTCCATGTCGTCCTCCATGGCCGCCACGGACAGCTTCCTCCAATGCCTCTCGGCGAGCATACCCAGCCAGCTCCTGTACACGCAGAGCTCGCCGTCGTACACGTCGGTGCTGGACGCCGGCATCCGGAACCCTAAGTTCCTGACGAACACCACGCGGCCGGTCTGGATCATCACGCCGACGAACGCCTCCCACGTCCAGGCCGCCGTGCTCTGCGGCCGCCGGAACGGCGTCCGCCTCCGCATCCGCAGCGGCGGGCACGACTACGAGGGCCTCTCGTACAGGTCGGAGCGGCCGGAGACGTTCGCCGTGCTCGACCTCGTCAACATCCGCGCCGTCCGCGTCGACGCGGCGTCCGCCACCGCGTGGGTGGACTCCGGCGCGACGCTCGGGGAGATGTACTACGCCATCGGGAAGGCCGGCGGCCGGATCGCGTTCCCGGCCGGCCTGTGTCCGACCGTCGGCGTCGGCGGCCACTTCAGCGGCGGCGGCTTCGGCATGCTGCTCCGCAAGTACGGCCTCGCCGCCGACAACGTCGTCGACGCCGTCCTCGTGGACGCCAAGGGCAGGCTCCTCGACAAGAACTCCATGGGCAGCGACGTCTTCTGGGCGCTCCGCGGCGGCGCCGGCGAGAGCTTCGGGATCGTGCTCTCCTGGAAGGTGAAGCTCGTGGCCGTGCCGCCGACCGTCACGGTGTTCAACGTCCCGGTGACCGTGAGCCAGGGCGCCATCGACGTCGTCACGAGGTGGCAGGCCGTCGCGCCGTCGCTCCCCGACGACCTGTTCATCCGCGTGCTCGTCCAGGGCCAGAGGGCCAGCTTCCAGTCCCTCTACCTCGGCACCTGCGACGCGCTGCTGCCGGTGATGCGCAGCCGCTTCCCGGAGCTCGGCATGAACCGGTCGGACTGCAGGGAGATGACTTGGATCCAGTCCGTCCCCTACATCTACCTCGGCAGCAGCGCCACCGTGGAGGACATCCTGAACCGGACCATCGCCATGGACACCTCCAACAAGGCCACCTCCGACTACGTCCGGCAAGCCATCGGCAGGGACACGTGGAGCGCCATCTTCGGGTGGCTCGCGCGGCCCAACGCCGGGCTGATGATCCTGGACCCGTACGGCGGGCAGATCGGCAGCGTGGCGGAGGCGGCGACGCCGTTCCCGCACCGCGGCGGCGTGCTCTACAACATCCAGTACATGAACTTCTGGAGCGCGGCGGGCGGAGGCGGCGGCGGCGCGGCGCAGAGGGCGTGGATCAGGGACTTCTACGCGTTCATGGCGCCGTTCGTGAGCAAGGACCCGAGGGAGGCGTACGCCAACTACAGGGACCTGGACCTCGGCGAGAACGTGGTCGGCGCCGGCGGCGTCAGCAGCTACGACGCCGGCAAGGTGTGGGGGGAGAAGTACTTCAGGGGGAACTACCAGCGGCTCGCCATGGCCAAGGCGCAGATCGACGCCGACGACTACTTCAGGAACGAGCAGAGCATCCCGCCACTTGTCGCCGGAAAATGACGAGCCAATTCAAATGTAGCATGGCCTACTCCCTCCGTCACATAAAAAATAATCTAGTGCCGGATATAATTAGGAAGTATCAGATTTAATACTAAATTAGTTTTTTATGAGATGGAGGGAGTAGTGCATGGCAGACAGTCAAACTAATAGCTGTAAAAATCTTTGGTCATGTGTAAAGATGCGTGGTGTATAGGGTAGCTACGCCGTCTATATGTTTGAAAATTCATCACTGTACTTATCTTTTTTTTCTTCCAATTGTATTTTGTGGTGCGGATCGATGTACTATCTTTCACATAAGCTGAGCTTATTGCGTGCTC] [+] EMBL CB642342 [ TTGCACACAGCAGCTAGTACGTGTTCGATCGTTGCATGCACGACGCAAACATGGCCATGTCGTCGCGAAGCTTAGGCGCCCTAGCCGCCTTCGTCTTCCTCTGCTCAGCTGCCTCCATGTCGTCCTCCATGGCCGCCACGGACAGCTTCCTCCAATGCCTCTCGGCGAGCATACCCAGCCAGCTCCTGTACACGCAGAGCTCGCCGTCGTACACGTCGGTGCTGGACGCCGGCATCCGGAACCCTAAGTTCCTGACGAACACCACGCGGCCGGTCTGGATCATCACGCCGACGAACGCCTCCCACGTCCAGGCCGCCGTGCTCTGCGGCCGCCGGAACGGCGTCCGCCTCCGCATCCGCAGCGGCGGGCACGACTACGAGGGCCTCTCGTACAGGTCGGAGCGGCCGGAGACGTTCGCCGTGCTCGACCTCGTCAACATCCGCGCCGTCCGCGTCGACGCGGCGTCCGCCACCGCGTGGGTGGACTCCGGCGCGACGCTCGGGGAGATGTACTACGCCATCGGGAAGGCCGGCGGCCGGATCGCGTTCCCGGCCGGCCTGTGTCCGACCGTCGGCGTCGGCGGCCACTTCAGCGGCGGCGGCTTCGGCATGCTGCTCCGCAAGTACGGCCTCGCCGCCGACAACGTCGTCGACGCCGTCCTCGTGGACGCCAAGGGCAGGCTCCTCGACAAGAACTCCATGGGCAGCGACGTCTTCTGGGCGCTCCGCGGC ] [+] EMBL CB675385 [ AAGCTTAGGCGCCCTAGCCGCCTTCGTCTTCCTCTGCTCAGCTGCCTCCATGTCGTCCTCCATGGCCGCCACGGACAGCTTCCTCCAATGCCTCTCGGCGAGCATACCCAGCCAGCTCCTGTACACGCAGAGCTCGCCGTCGTACACGTCGGTGCTGGACGCCGGCATCCGGAACCCTAAGTTCCTGACGAACACCACGCGGCCGGTCTGGATCATCACGCCGACGAACGCCTCCCACGTCCAGGCCGCCGTGCTCTGCGGCCGCCGGAACGGCGTCCGCCTCCGCATCCGCAGCGGCGGGCACGACTACGAGGGCCTCTCGTACAGGTCGGAGCGGCCGGAGACGTTCGCCGTGCTCGACCTCGTCAACATCCGCGCCGTCCGCGTCGACGCGGCGTCCGCCACCGCGTGGGTGGACTCCGGCGCGACGCTCGGGGAGATGTACTACGCCATCGGGAAGGCCGGCGGCCGGATCGCGTTCCCGGCCGGCCTGTGTCCGACCGTCGGCGTCGGCGGCCACTTCAGCGGCGGCGGCTTCGGCATGCTGCTCCGCAAGTACGGCCTCGCCGCCGACAACGTCGTCGACGCCGTCCTCGTGGACGCCAAGGGCAGGCTCCTCGACAAGAACTCCATGGGCAGCGACGTCTTCTGGGCGCTCCGCGGCGGCGCCGGCGAGAGCTTCGGGATCGTGCTCTCCTGGAAGGTGAAGCTCGTGGCCGTGCCGCCGACCGTCACGGTGTTCAACGTCCCGGTGACCGTGAGCCAGGGCGCCATCGACGTCGTCACGAGGTGGCAGGCCGTCGCG ] [-] EMBL BI807863 [ CCGCCTCCACATCCGCAGCGGCGGGCACGACTACGAGGGCCTCTCGTACAGGTCGGAGCGGCCGGAGACGTTCGCCGTGCTCGACCTCGTCAACATCCGCGCCGTCCGCGTCGACGCGGCGTCCGCCACCGCGTGGGTGGACTCCGGCGCGACGCTCGGGGAGATGTACTACGCCATCGGGAAGGCCGGCGGCCGGATCGCGTTCCCGGCCGGCCTGTGTCCGACCGTCGGCGTCGGCGGCCACTTCAGCGGCGGCGGCTTCGGCATGCTGCTCCGCAAGTACGGCCTCGCCGCCGACAACGTCGTCGACGCCGTCCTCGTGGACGCCAAGGGCAGGCTCCTCGACAAGAACTCCATGGGCAGCGACGTCTTCTGGGCGCTCCGCGGCGGCGCCGGCGAGAGCTTCGGGATCGTGCTCTCCTGGAAGGTGAAGCTCGTGGCCGTGCCGCCGACCGTCACGGTGTTCAACGTCCCGGTGACCGTGAGCCA GGCGCCATCGACGTCGTCACGAGGTGGCAGGCCGTCGCGCCGTCGCTCCCCGACGAACTGTTCATCCGCGTGCTCGTCCAGG CAGAGG CAGCTTCCAGT CCTCTA CTCGG AACTG GACGCGCTG TG CGGTGATGCGCAG ] [-] EMBL CB675386 [ GCAGGGACACGTGGAGCGCCATCTTCGGGTGGCTCGCGCGGCCCAACGCCGGGCTGATGATCCTGGACCCGTACGGCGGGCAGATCGGCAGCGTGGCGGAGGCGGCGACGCCGTTCCCGCACCGCGGCGGCGTGCTCTACAACATCCAGTACATGAACTTCTGGAGCGCGGCGGGCGGAGGCGGCGGCGGCGCGGCGCAGAGGGCGTGGATCAGGGACTTCTACGCGTTCATGGCGCCGTTCGTGAGCAAGGACCCGAGGGAGGCGTACGCCAACTACAGGGACCTGGACCTCGGCGAGAACGTGGTCGGCGCCGGCGGCGTCAGCAGCTACGACGCCGGCAAGGTGTGGGGGGAGAAGTACTTCAGGGGGAACTACCAGCGGCTCGCCATGGCCAAGGCGCAGATCGACGCCGACGACTACTTCAGGAACGAGCAGAGCATCCCGCCACTTGTCGCCGGAAAATGACGAGCCAATTCAAATGTAGCATGGCCTACTCCCTCCGTCACATAAAAAATAATCTAGTGCCGGATATAATTAGGAAGTATCAGATTTAATACTAAATTAGTTTTTTATGAGATGGAGGGAGTAGTGCATGGCAGACAGTCAAACTAATAGCTGTAAAAATCTTTGGTCATGTGTAAAGATGCGTGGTGTATAGGGTAGCTACGCCGTCTATATGTTTGAAAATTCATCACTGTACTTATCTTTTTTTTCTTCCAATTGTATTTTGTGGTGCGGATCGATGTACTATCTTT ] [-] EMBL CB642343 [ TACGGCGGGCAGATCGGCAGCGTGGCGGAGGCGGCGACGCCGTTCCCGCACCGCGGCGGCGTGCTTTACAACATCCAGTACATGAACTTCTGGAGCGCGGCGGGCGGAGGCGGCGGCGGCGCGGCGCAGAGGGCGTGGATCAGGGACTTTTACGCGTTCATGGCGCCGTTCGTGAGCAAGGACCCGAGGGAGGCGTACGCCAACTACAGGGACCTGGACCTCGGCGAGAACGTGGTCGGCGCCGGCGGCGTCAGCAGTTACGACGCCGGCAAGGTGTGGGGGGAGAAGTACTTCAGGGGGAACTACCAGCGGCTCGCCATGGCCAAGGCGCAGATCGACGCCGACGACTACTTCAGGAACGAGCAGAGCATCCCGCCACTTGTCGCCGGAAAATGACGAGCCAATTCAAATGTAGCATGGCCTACTCCCTCCGTCACATAAAAAATAATTTAGTGCCGGATATAATTAGGAAGTATCAGATTTAATACTAAATTAGTTTTTTATGAGATGGAGGGAGTAGTGCATGGCAGCCAGTCAAACTAATAGCTGTAAAAATCTTTGGTCATGTGTAAAGATGCGTGGTGTATAGGGTAGCTACCCCGTCTATATGTTTGAAAATTCATCCCTGTACTTATCTTTTTTTTCTTCCAATTGTATTTTGTGGTAGGGATCGATGTA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||