cluster # 8899

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Oryza sativa
cluster # 8899 cluster # 8899 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8899#0 length = 1953 sequences # 6
consensusID : consensus_8899#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1953
fasta sequence
                              [GCATCGTTCGTTCGTTGCAAACAGCAGCTAGTACGTGTTCGATCGTTGCATGCACGACGCAAACATGGCCATGTCGTCGCGAAGCTTAGGCGCCCTAGCCGCCTTCGTCTTCCTCTGCTCAGCTGCCTCCATGTCGTCCTCCATGGCCGCCACGGACAGCTTCCTCCAATGCCTCTCGGCGAGCATACCCAGCCAGCTCCTGTACACGCAGAGCTCGCCGTCGTACACGTCGGTGCTGGACGCCGGCATCCGGAACCCTAAGTTCCTGACGAACACCACGCGGCCGGTCTGGATCATCACGCCGACGAACGCCTCCCACGTCCAGGCCGCCGTGCTCTGCGGCCGCCGGAACGGCGTCCGCCTCCGCATCCGCAGCGGCGGGCACGACTACGAGGGCCTCTCGTACAGGTCGGAGCGGCCGGAGACGTTCGCCGTGCTCGACCTCGTCAACATCCGCGCCGTCCGCGTCGACGCGGCGTCCGCCACCGCGTGGGTGGACTCCGGCGCGACGCTCGGGGAGATGTACTACGCCATCGGGAAGGCCGGCGGCCGGATCGCGTTCCCGGCCGGCCTGTGTCCGACCGTCGGCGTCGGCGGCCACTTCAGCGGCGGCGGCTTCGGCATGCTGCTCCGCAAGTACGGCCTCGCCGCCGACAACGTCGTCGACGCCGTCCTCGTGGACGCCAAGGGCAGGCTCCTCGACAAGAACTCCATGGGCAGCGACGTCTTCTGGGCGCTCCGCGGCGGCGCCGGCGAGAGCTTCGGGATCGTGCTCTCCTGGAAGGTGAAGCTCGTGGCCGTGCCGCCGACCGTCACGGTGTTCAACGTCCCGGTGACCGTGAGCCAGGGCGCCATCGACGTCGTCACGAGGTGGCAGGCCGTCGCGCCGTCGCTCCCCGACGACCTGTTCATCCGCGTGCTCGTCCAGGGCCAGAGGGCCAGCTTCCAGTCCCTCTACCTCGGCACCTGCGACGCGCTGCTGCCGGTGATGCGCAGCCGCTTCCCGGAGCTCGGCATGAACCGGTCGGACTGCAGGGAGATGACTTGGATCCAGTCCGTCCCCTACATCTACCTCGGCAGCAGCGCCACCGTGGAGGACATCCTGAACCGGACCATCGCCATGGACACCTCCAACAAGGCCACCTCCGACTACGTCCGGCAAGCCATCGGCAGGGACACGTGGAGCGCCATCTTCGGGTGGCTCGCGCGGCCCAACGCCGGGCTGATGATCCTGGACCCGTACGGCGGGCAGATCGGCAGCGTGGCGGAGGCGGCGACGCCGTTCCCGCACCGCGGCGGCGTGCTCTACAACATCCAGTACATGAACTTCTGGAGCGCGGCGGGCGGAGGCGGCGGCGGCGCGGCGCAGAGGGCGTGGATCAGGGACTTCTACGCGTTCATGGCGCCGTTCGTGAGCAAGGACCCGAGGGAGGCGTACGCCAACTACAGGGACCTGGACCTCGGCGAGAACGTGGTCGGCGCCGGCGGCGTCAGCAGCTACGACGCCGGCAAGGTGTGGGGGGAGAAGTACTTCAGGGGGAACTACCAGCGGCTCGCCATGGCCAAGGCGCAGATCGACGCCGACGACTACTTCAGGAACGAGCAGAGCATCCCGCCACTTGTCGCCGGAAAATGACGAGCCAATTCAAATGTAGCATGGCCTACTCCCTCCGTCACATAAAAAATAATCTAGTGCCGGATATAATTAGGAAGTATCAGATTTAATACTAAATTAGTTTTTTATGAGATGGAGGGAGTAGTGCATGGCAGACAGTCAAACTAATAGCTGTAAAAATCTTTGGTCATGTGTAAAGATGCGTGGTGTATAGGGTAGCTACGCCGTCTATATGTTTGAAAATTCATCACTGTACTTATCTTTTTTTTCTTCCAATTGTATTTTGTGGTGCGGATCGATGTACTATCTTTCACATAAGCTGAGCTTATTGCGTGCTC]

[+] EMBL AK109673             [GCATCGTTCGTTCGTTGCAAACAGCAGCTAGTACGTGTTCGATCGTTGCATGCACGACGCAAACATGGCCATGTCGTCGCGAAGCTTAGGCGCCCTAGCCGCCTTCGTCTTCCTCTGCTCAGCTGCCTCCATGTCGTCCTCCATGGCCGCCACGGACAGCTTCCTCCAATGCCTCTCGGCGAGCATACCCAGCCAGCTCCTGTACACGCAGAGCTCGCCGTCGTACACGTCGGTGCTGGACGCCGGCATCCGGAACCCTAAGTTCCTGACGAACACCACGCGGCCGGTCTGGATCATCACGCCGACGAACGCCTCCCACGTCCAGGCCGCCGTGCTCTGCGGCCGCCGGAACGGCGTCCGCCTCCGCATCCGCAGCGGCGGGCACGACTACGAGGGCCTCTCGTACAGGTCGGAGCGGCCGGAGACGTTCGCCGTGCTCGACCTCGTCAACATCCGCGCCGTCCGCGTCGACGCGGCGTCCGCCACCGCGTGGGTGGACTCCGGCGCGACGCTCGGGGAGATGTACTACGCCATCGGGAAGGCCGGCGGCCGGATCGCGTTCCCGGCCGGCCTGTGTCCGACCGTCGGCGTCGGCGGCCACTTCAGCGGCGGCGGCTTCGGCATGCTGCTCCGCAAGTACGGCCTCGCCGCCGACAACGTCGTCGACGCCGTCCTCGTGGACGCCAAGGGCAGGCTCCTCGACAAGAACTCCATGGGCAGCGACGTCTTCTGGGCGCTCCGCGGCGGCGCCGGCGAGAGCTTCGGGATCGTGCTCTCCTGGAAGGTGAAGCTCGTGGCCGTGCCGCCGACCGTCACGGTGTTCAACGTCCCGGTGACCGTGAGCCAGGGCGCCATCGACGTCGTCACGAGGTGGCAGGCCGTCGCGCCGTCGCTCCCCGACGACCTGTTCATCCGCGTGCTCGTCCAGGGCCAGAGGGCCAGCTTCCAGTCCCTCTACCTCGGCACCTGCGACGCGCTGCTGCCGGTGATGCGCAGCCGCTTCCCGGAGCTCGGCATGAACCGGTCGGACTGCAGGGAGATGACTTGGATCCAGTCCGTCCCCTACATCTACCTCGGCAGCAGCGCCACCGTGGAGGACATCCTGAACCGGACCATCGCCATGGACACCTCCAACAAGGCCACCTCCGACTACGTCCGGCAAGCCATCGGCAGGGACACGTGGAGCGCCATCTTCGGGTGGCTCGCGCGGCCCAACGCCGGGCTGATGATCCTGGACCCGTACGGCGGGCAGATCGGCAGCGTGGCGGAGGCGGCGACGCCGTTCCCGCACCGCGGCGGCGTGCTCTACAACATCCAGTACATGAACTTCTGGAGCGCGGCGGGCGGAGGCGGCGGCGGCGCGGCGCAGAGGGCGTGGATCAGGGACTTCTACGCGTTCATGGCGCCGTTCGTGAGCAAGGACCCGAGGGAGGCGTACGCCAACTACAGGGACCTGGACCTCGGCGAGAACGTGGTCGGCGCCGGCGGCGTCAGCAGCTACGACGCCGGCAAGGTGTGGGGGGAGAAGTACTTCAGGGGGAACTACCAGCGGCTCGCCATGGCCAAGGCGCAGATCGACGCCGACGACTACTTCAGGAACGAGCAGAGCATCCCGCCACTTGTCGCCGGAAAATGACGAGCCAATTCAAATGTAGCATGGCCTACTCCCTCCGTCACATAAAAAATAATCTAGTGCCGGATATAATTAGGAAGTATCAGATTTAATACTAAATTAGTTTTTTATGAGATGGAGGGAGTAGTGCATGGCAGACAGTCAAACTAATAGCTGTAAAAATCTTTGGTCATGTGTAAAGATGCGTGGTGTATAGGGTAGCTACGCCGTCTATATGTTTGAAAATTCATCACTGTACTTATCTTTTTTTTCTTCCAATTGTATTTTGTGGTGCGGATCGATGTACTATCTTTCACATAAGCTGAGCTTATTGCGTGCTC]
[+] EMBL CB642342             [              TTGCACACAGCAGCTAGTACGTGTTCGATCGTTGCATGCACGACGCAAACATGGCCATGTCGTCGCGAAGCTTAGGCGCCCTAGCCGCCTTCGTCTTCCTCTGCTCAGCTGCCTCCATGTCGTCCTCCATGGCCGCCACGGACAGCTTCCTCCAATGCCTCTCGGCGAGCATACCCAGCCAGCTCCTGTACACGCAGAGCTCGCCGTCGTACACGTCGGTGCTGGACGCCGGCATCCGGAACCCTAAGTTCCTGACGAACACCACGCGGCCGGTCTGGATCATCACGCCGACGAACGCCTCCCACGTCCAGGCCGCCGTGCTCTGCGGCCGCCGGAACGGCGTCCGCCTCCGCATCCGCAGCGGCGGGCACGACTACGAGGGCCTCTCGTACAGGTCGGAGCGGCCGGAGACGTTCGCCGTGCTCGACCTCGTCAACATCCGCGCCGTCCGCGTCGACGCGGCGTCCGCCACCGCGTGGGTGGACTCCGGCGCGACGCTCGGGGAGATGTACTACGCCATCGGGAAGGCCGGCGGCCGGATCGCGTTCCCGGCCGGCCTGTGTCCGACCGTCGGCGTCGGCGGCCACTTCAGCGGCGGCGGCTTCGGCATGCTGCTCCGCAAGTACGGCCTCGCCGCCGACAACGTCGTCGACGCCGTCCTCGTGGACGCCAAGGGCAGGCTCCTCGACAAGAACTCCATGGGCAGCGACGTCTTCTGGGCGCTCCGCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB675385             [                                                                                 AAGCTTAGGCGCCCTAGCCGCCTTCGTCTTCCTCTGCTCAGCTGCCTCCATGTCGTCCTCCATGGCCGCCACGGACAGCTTCCTCCAATGCCTCTCGGCGAGCATACCCAGCCAGCTCCTGTACACGCAGAGCTCGCCGTCGTACACGTCGGTGCTGGACGCCGGCATCCGGAACCCTAAGTTCCTGACGAACACCACGCGGCCGGTCTGGATCATCACGCCGACGAACGCCTCCCACGTCCAGGCCGCCGTGCTCTGCGGCCGCCGGAACGGCGTCCGCCTCCGCATCCGCAGCGGCGGGCACGACTACGAGGGCCTCTCGTACAGGTCGGAGCGGCCGGAGACGTTCGCCGTGCTCGACCTCGTCAACATCCGCGCCGTCCGCGTCGACGCGGCGTCCGCCACCGCGTGGGTGGACTCCGGCGCGACGCTCGGGGAGATGTACTACGCCATCGGGAAGGCCGGCGGCCGGATCGCGTTCCCGGCCGGCCTGTGTCCGACCGTCGGCGTCGGCGGCCACTTCAGCGGCGGCGGCTTCGGCATGCTGCTCCGCAAGTACGGCCTCGCCGCCGACAACGTCGTCGACGCCGTCCTCGTGGACGCCAAGGGCAGGCTCCTCGACAAGAACTCCATGGGCAGCGACGTCTTCTGGGCGCTCCGCGGCGGCGCCGGCGAGAGCTTCGGGATCGTGCTCTCCTGGAAGGTGAAGCTCGTGGCCGTGCCGCCGACCGTCACGGTGTTCAACGTCCCGGTGACCGTGAGCCAGGGCGCCATCGACGTCGTCACGAGGTGGCAGGCCGTCGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL BI807863             [                                                                                                                                                                                                                                                                                                                                                                     CCGCCTCCACATCCGCAGCGGCGGGCACGACTACGAGGGCCTCTCGTACAGGTCGGAGCGGCCGGAGACGTTCGCCGTGCTCGACCTCGTCAACATCCGCGCCGTCCGCGTCGACGCGGCGTCCGCCACCGCGTGGGTGGACTCCGGCGCGACGCTCGGGGAGATGTACTACGCCATCGGGAAGGCCGGCGGCCGGATCGCGTTCCCGGCCGGCCTGTGTCCGACCGTCGGCGTCGGCGGCCACTTCAGCGGCGGCGGCTTCGGCATGCTGCTCCGCAAGTACGGCCTCGCCGCCGACAACGTCGTCGACGCCGTCCTCGTGGACGCCAAGGGCAGGCTCCTCGACAAGAACTCCATGGGCAGCGACGTCTTCTGGGCGCTCCGCGGCGGCGCCGGCGAGAGCTTCGGGATCGTGCTCTCCTGGAAGGTGAAGCTCGTGGCCGTGCCGCCGACCGTCACGGTGTTCAACGTCCCGGTGACCGTGAGCCA GGCGCCATCGACGTCGTCACGAGGTGGCAGGCCGTCGCGCCGTCGCTCCCCGACGAACTGTTCATCCGCGTGCTCGTCCAGG  CAGAGG  CAGCTTCCAGT CCTCTA CTCGG AACTG GACGCGCTG TG CGGTGATGCGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB675386             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCAGGGACACGTGGAGCGCCATCTTCGGGTGGCTCGCGCGGCCCAACGCCGGGCTGATGATCCTGGACCCGTACGGCGGGCAGATCGGCAGCGTGGCGGAGGCGGCGACGCCGTTCCCGCACCGCGGCGGCGTGCTCTACAACATCCAGTACATGAACTTCTGGAGCGCGGCGGGCGGAGGCGGCGGCGGCGCGGCGCAGAGGGCGTGGATCAGGGACTTCTACGCGTTCATGGCGCCGTTCGTGAGCAAGGACCCGAGGGAGGCGTACGCCAACTACAGGGACCTGGACCTCGGCGAGAACGTGGTCGGCGCCGGCGGCGTCAGCAGCTACGACGCCGGCAAGGTGTGGGGGGAGAAGTACTTCAGGGGGAACTACCAGCGGCTCGCCATGGCCAAGGCGCAGATCGACGCCGACGACTACTTCAGGAACGAGCAGAGCATCCCGCCACTTGTCGCCGGAAAATGACGAGCCAATTCAAATGTAGCATGGCCTACTCCCTCCGTCACATAAAAAATAATCTAGTGCCGGATATAATTAGGAAGTATCAGATTTAATACTAAATTAGTTTTTTATGAGATGGAGGGAGTAGTGCATGGCAGACAGTCAAACTAATAGCTGTAAAAATCTTTGGTCATGTGTAAAGATGCGTGGTGTATAGGGTAGCTACGCCGTCTATATGTTTGAAAATTCATCACTGTACTTATCTTTTTTTTCTTCCAATTGTATTTTGTGGTGCGGATCGATGTACTATCTTT                           ]
[-] EMBL CB642343             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TACGGCGGGCAGATCGGCAGCGTGGCGGAGGCGGCGACGCCGTTCCCGCACCGCGGCGGCGTGCTTTACAACATCCAGTACATGAACTTCTGGAGCGCGGCGGGCGGAGGCGGCGGCGGCGCGGCGCAGAGGGCGTGGATCAGGGACTTTTACGCGTTCATGGCGCCGTTCGTGAGCAAGGACCCGAGGGAGGCGTACGCCAACTACAGGGACCTGGACCTCGGCGAGAACGTGGTCGGCGCCGGCGGCGTCAGCAGTTACGACGCCGGCAAGGTGTGGGGGGAGAAGTACTTCAGGGGGAACTACCAGCGGCTCGCCATGGCCAAGGCGCAGATCGACGCCGACGACTACTTCAGGAACGAGCAGAGCATCCCGCCACTTGTCGCCGGAAAATGACGAGCCAATTCAAATGTAGCATGGCCTACTCCCTCCGTCACATAAAAAATAATTTAGTGCCGGATATAATTAGGAAGTATCAGATTTAATACTAAATTAGTTTTTTATGAGATGGAGGGAGTAGTGCATGGCAGCCAGTCAAACTAATAGCTGTAAAAATCTTTGGTCATGTGTAAAGATGCGTGGTGTATAGGGTAGCTACCCCGTCTATATGTTTGAAAATTCATCCCTGTACTTATCTTTTTTTTCTTCCAATTGTATTTTGTGGTAGGGATCGATGTA                                   ]




>consensus_8899#0
GCATCGTTCGTTCGTTGCAAACAGCAGCTAGTACGTGTTCGATCGTTGCATGCACGACGC
AAACATGGCCATGTCGTCGCGAAGCTTAGGCGCCCTAGCCGCCTTCGTCTTCCTCTGCTC
AGCTGCCTCCATGTCGTCCTCCATGGCCGCCACGGACAGCTTCCTCCAATGCCTCTCGGC
GAGCATACCCAGCCAGCTCCTGTACACGCAGAGCTCGCCGTCGTACACGTCGGTGCTGGA
CGCCGGCATCCGGAACCCTAAGTTCCTGACGAACACCACGCGGCCGGTCTGGATCATCAC
GCCGACGAACGCCTCCCACGTCCAGGCCGCCGTGCTCTGCGGCCGCCGGAACGGCGTCCG
CCTCCGCATCCGCAGCGGCGGGCACGACTACGAGGGCCTCTCGTACAGGTCGGAGCGGCC
GGAGACGTTCGCCGTGCTCGACCTCGTCAACATCCGCGCCGTCCGCGTCGACGCGGCGTC
CGCCACCGCGTGGGTGGACTCCGGCGCGACGCTCGGGGAGATGTACTACGCCATCGGGAA
GGCCGGCGGCCGGATCGCGTTCCCGGCCGGCCTGTGTCCGACCGTCGGCGTCGGCGGCCA
CTTCAGCGGCGGCGGCTTCGGCATGCTGCTCCGCAAGTACGGCCTCGCCGCCGACAACGT
CGTCGACGCCGTCCTCGTGGACGCCAAGGGCAGGCTCCTCGACAAGAACTCCATGGGCAG
CGACGTCTTCTGGGCGCTCCGCGGCGGCGCCGGCGAGAGCTTCGGGATCGTGCTCTCCTG
GAAGGTGAAGCTCGTGGCCGTGCCGCCGACCGTCACGGTGTTCAACGTCCCGGTGACCGT
GAGCCAGGGCGCCATCGACGTCGTCACGAGGTGGCAGGCCGTCGCGCCGTCGCTCCCCGA
CGACCTGTTCATCCGCGTGCTCGTCCAGGGCCAGAGGGCCAGCTTCCAGTCCCTCTACCT
CGGCACCTGCGACGCGCTGCTGCCGGTGATGCGCAGCCGCTTCCCGGAGCTCGGCATGAA
CCGGTCGGACTGCAGGGAGATGACTTGGATCCAGTCCGTCCCCTACATCTACCTCGGCAG
CAGCGCCACCGTGGAGGACATCCTGAACCGGACCATCGCCATGGACACCTCCAACAAGGC
CACCTCCGACTACGTCCGGCAAGCCATCGGCAGGGACACGTGGAGCGCCATCTTCGGGTG
GCTCGCGCGGCCCAACGCCGGGCTGATGATCCTGGACCCGTACGGCGGGCAGATCGGCAG
CGTGGCGGAGGCGGCGACGCCGTTCCCGCACCGCGGCGGCGTGCTCTACAACATCCAGTA
CATGAACTTCTGGAGCGCGGCGGGCGGAGGCGGCGGCGGCGCGGCGCAGAGGGCGTGGAT
CAGGGACTTCTACGCGTTCATGGCGCCGTTCGTGAGCAAGGACCCGAGGGAGGCGTACGC
CAACTACAGGGACCTGGACCTCGGCGAGAACGTGGTCGGCGCCGGCGGCGTCAGCAGCTA
CGACGCCGGCAAGGTGTGGGGGGAGAAGTACTTCAGGGGGAACTACCAGCGGCTCGCCAT
GGCCAAGGCGCAGATCGACGCCGACGACTACTTCAGGAACGAGCAGAGCATCCCGCCACT
TGTCGCCGGAAAATGACGAGCCAATTCAAATGTAGCATGGCCTACTCCCTCCGTCACATA
AAAAATAATCTAGTGCCGGATATAATTAGGAAGTATCAGATTTAATACTAAATTAGTTTT
TTATGAGATGGAGGGAGTAGTGCATGGCAGACAGTCAAACTAATAGCTGTAAAAATCTTT
GGTCATGTGTAAAGATGCGTGGTGTATAGGGTAGCTACGCCGTCTATATGTTTGAAAATT
CATCACTGTACTTATCTTTTTTTTCTTCCAATTGTATTTTGTGGTGCGGATCGATGTACT
ATCTTTCACATAAGCTGAGCTTATTGCGTGCTC
clustalw multiple alignements is not computed in this case