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Oryza sativa
cluster # 8902 cluster # 8902       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8902#0 length = 1697 sequences # 2  
consensus_8902#1 length = 1655 sequences # 4  

consensusID : consensus_8902#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1697
fasta sequence
                              [TTCCTCGAGCACTGTTGGCCTACTGGATCACTTCCCTACCACTCCACTACTAGCCACTGGCCATTGCTCCTCTCCTCCCACTCTTCTTCTCCATCTCCTCTCCTCTCTTCTCTCATTCTCTTCCCTGCAACTTGCAAACAGTGCTCTGCAGAATGACCAAAGATGAGGATTTCAAGCTGGTCAAGATCCAGACCCATGTACTGAGGGTGAACATACACTGTGATGGCTGTAAGCACAAGGTGAAGAAGCTGCTTCAGAAGATTGAAGGCGTGTACTCGGTGGCCTTAGATGTAGACAACCATAAGGTCACAGTGACTGGCAATGTGGACTCCGATACATTGATTAGGAAGCTCACCAGAGGAGGTAAGCATGCAGAGCTGTGGTCACAGCAGAAGGGTGGCAGCAACCAGGGCCACAAGGGCAGCAACAACCAGCAGAAGCAGCAGCAGCAGCAAGGGCAGCAGCAGCATGGACAGCAGCATCAGAAGCAAGGTGCCAACCCAAGCAAGGATGGCAACAAGAACAACAACATCCTCAAGGACCAGGGCAAGCAAGGAGGTGTTGGAGGCCTCATCCAGGGCCTCAAGGCCTTCAAGAACCAGCACAGCAAGAACCAGCTCCCTGAGCTTGATTCAGAGGATGATGACTTGTATGATGACGAAGACGATGAGTTTGATGATGACTATGAGGACGATCTCCGCTTTCTTGGAGACAAGATGAGCCAGCTTGGTTTCCTCAGGCAGCAAGCTGCAGCTGCAGCGGCGGCCAATGTCAAGAACAAGAATGCCAACACTGCCACCGTCAACAACCACCACAACAACGTCAATGGCAAGAAAGGTGGTGGCGGCGGTGGCAGTGCTGGAGGTGGAAATCACCATCAGAACAACCACCACCAGAACCAGAAGAATCCCAATGTGATCAACATGGCAGCAGCCAATGCCAAGATGGCCAATGGTGCCCAGAAGAACACTGGCGCCATCAATGGAATGATGGGCCTCAACCATGGCCTCGGAACAGCCGGTGCCACTCCTGGTTTTCAGGGCTACACCGGCTTCAACCACCCGTCCTATGCTTCTGCCGGCTATGGAGGGCTTCAACAACAGCACCTCCAGCAACAACAGCAGAGCAACAATCTCATGGCAAGCATGCAGGGTTACCATCATCACCCAGCAGCCACGGCGGCGATGATGAACAACCTGAGGGGTCTAAACAACAACATGATGATGATGCATCAGCCACAACAGCAGCCACAGATGATGTACCACCGGTCTCCTCAGATTAGCCCTTACACCGCCTACTACAACCCTTACAGCTACTACTACCACCCTGGCGCCGCCGGTTATCATCCCGCCAGCAATGGCGATGTGGAGACCATGTTCAGCGATGAGAATACCAAGGGTTGTGTTGTCATGTAGTAGGGATGCTGTTACAGTGTTACAATGTAGAGGTTGGTGATGAAGCATGGGAATGGTTATGCAATCCTACTGTTTTTTTCTTCTTCTTTTTCTTCATTGTTTTTCTGCTTTTATTGGTTTCTCCTGTATCAAGAATGAATCATGCATGTTGACTTAGATGTCGTGTTTGAAAGTAGTAGCACTTCAGAGGATGATCAAAAGTGTAATGTAATAGTTTTACCGCCTAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTGCAGGTCGCGGCCGCTAGACT]

[+] EMBL AK105015             [TTCCTCGAGCACTGTTGGCCTACTGGATCACTTCCCTACCACTCCACTACTAGCCACTGGCCATTGCTCCTCTCCTCCCACTCTTCTTCTCCATCTCCTCTCCTCTCTTCTCTCATTCTCTTCCCTGCAACTTGCAAACAGTGCTCTGCAGAATGACCAAAGATGAGGATTTCAAGCTGGTCAAGATCCAGACCCATGTACTGAGGGTGAACATACACTGTGATGGCTGTAAGCACAAGGTGAAGAAGCTGCTTCAGAAGATTGAAGGCGTGTACTCGGTGGCCTTAGATGTAGACAACCATAAGGTCACAGTGACTGGCAATGTGGACTCCGATACATTGATTAGGAAGCTCACCAGAGGAGGTAAGCATGCAGAGCTGTGGTCACAGCAGAAGGGTGGCAGCAACCAGGGCCACAAGGGCAGCAACAACCAGCAGAAGCAGCAGCAGCAGCAAGGGCAGCAGCAGCATGGACAGCAGCATCAGAAGCAAGGTGCCAACCCAAGCAAGGATGGCAACAAGAACAACAACATCCTCAAGGACCAGGGCAAGCAAGGAGGTGTTGGAGGCCTCATCCAGGGCCTCAAGGCCTTCAAGAACCAGCACAGCAAGAACCAGCTCCCTGAGCTTGATTCAGAGGATGATGACTTGTATGATGACGAAGACGATGAGTTTGATGATGACTATGAGGACGATCTCCGCTTTCTTGGAGACAAGATGAGCCAGCTTGGTTTCCTCAGGCAGCAAGCTGCAGCTGCAGCGGCGGCCAATGTCAAGAACAAGAATGCCAACACTGCCACCGTCAACAACCACCACAACAACGTCAATGGCAAGAAAGGTGGTGGCGGCGGTGGCAGTGCTGGAGGTGGAAATCACCATCAGAACAACCACCACCAGAACCAGAAGAATCCCAATGTGATCAACATGGCAGCAGCCAATGCCAAGATGGCCAATGGTGCCCAGAAGAACACTGGCGCCATCAATGGAATGATGGGCCTCAACCATGGCCTCGGAACAGCCGGTGCCACTCCTGGTTTTCAGGGCTACACCGGCTTCAACCACCCGTCCTATGCTTCTGCCGGCTATGGAGGGCTTCAACAACAGCACCTCCAGCAACAACAGCAGAGCAACAATCTCATGGCAAGCATGCAGGGTTACCATCATCACCCAGCAGCCACGGCGGCGATGATGAACAACCTGAGGGGTCTAAACAACAACATGATGATGATGCATCAGCCACAACAGCAGCCACAGATGATGTACCACCGGTCTCCTCAGATTAGCCCTTACACCGCCTACTACAACCCTTACAGCTACTACTACCACCCTGGCGCCGCCGGTTATCATCCCGCCAGCAATGGCGATGTGGAGACCATGTTCAGCGATGAGAATACCAAGGGTTGTGTTGTCATGTAGTAGGGATGCTGTTACAGTGTTACAATGTAGAGGTTGGTGATGAAGCATGGGAATGGTTATGCAATCCTACTGTTTTTTTCTTCTTCTTTTTCTTCATTGTTTTTCTGCTTTTATTGGTTTCTCCTGTATCAAGAATGAATCATGCATGTTGACTTAGATGTCGTGTTTGAAAGTAGTAGCACTTCAGAGGATGATCAAAAGTGTAATGTAATAGTTTTACCGCCTAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTGCAGGTCGCGGCCGCTAGACT]
[+] EMBL AU222740             [                                                                                                                                                                                       AGATCCAGACCCATGTACTGAGGGTGAACATACACTGTGATGGCTGTAAGCACAAGGTGAAGAAGCTGCTTCAGAAGATTGAAGGCGTGTACTCGGTGGCCTTAGATGTAGACAACCATAAGGTCACAGTGACTGGCAATGTGGACTCCGATACATTGATTAGGAAGCTCACCAGAGGAGGTAAGCATGCAGAGCTGTGGTCACAGCAGAAGGGTGGCAGCAACCAGGGCCACAAGGGCAGCAACAACCAGCAGAAGCAGCAGCAGCAGCAAGGGCAGCAGCAGCATGGACAGCAGCATCAGAAGCAAGGTGCCAACCCAAGCAAGGATGGCAACAAGAACAACAACATCCTCAAGGACCAGGGCAAGCAAGGAGGTGTTGGAGGCCTCATCCAGGGCCTCAAGGCCTTCAAGAACCAGCACAGCAAGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]


>consensus_8902#0 TTCCTCGAGCACTGTTGGCCTACTGGATCACTTCCCTACCACTCCACTACTAGCCACTGG CCATTGCTCCTCTCCTCCCACTCTTCTTCTCCATCTCCTCTCCTCTCTTCTCTCATTCTC TTCCCTGCAACTTGCAAACAGTGCTCTGCAGAATGACCAAAGATGAGGATTTCAAGCTGG TCAAGATCCAGACCCATGTACTGAGGGTGAACATACACTGTGATGGCTGTAAGCACAAGG TGAAGAAGCTGCTTCAGAAGATTGAAGGCGTGTACTCGGTGGCCTTAGATGTAGACAACC ATAAGGTCACAGTGACTGGCAATGTGGACTCCGATACATTGATTAGGAAGCTCACCAGAG GAGGTAAGCATGCAGAGCTGTGGTCACAGCAGAAGGGTGGCAGCAACCAGGGCCACAAGG GCAGCAACAACCAGCAGAAGCAGCAGCAGCAGCAAGGGCAGCAGCAGCATGGACAGCAGC ATCAGAAGCAAGGTGCCAACCCAAGCAAGGATGGCAACAAGAACAACAACATCCTCAAGG ACCAGGGCAAGCAAGGAGGTGTTGGAGGCCTCATCCAGGGCCTCAAGGCCTTCAAGAACC AGCACAGCAAGAACCAGCTCCCTGAGCTTGATTCAGAGGATGATGACTTGTATGATGACG AAGACGATGAGTTTGATGATGACTATGAGGACGATCTCCGCTTTCTTGGAGACAAGATGA GCCAGCTTGGTTTCCTCAGGCAGCAAGCTGCAGCTGCAGCGGCGGCCAATGTCAAGAACA AGAATGCCAACACTGCCACCGTCAACAACCACCACAACAACGTCAATGGCAAGAAAGGTG GTGGCGGCGGTGGCAGTGCTGGAGGTGGAAATCACCATCAGAACAACCACCACCAGAACC AGAAGAATCCCAATGTGATCAACATGGCAGCAGCCAATGCCAAGATGGCCAATGGTGCCC AGAAGAACACTGGCGCCATCAATGGAATGATGGGCCTCAACCATGGCCTCGGAACAGCCG GTGCCACTCCTGGTTTTCAGGGCTACACCGGCTTCAACCACCCGTCCTATGCTTCTGCCG GCTATGGAGGGCTTCAACAACAGCACCTCCAGCAACAACAGCAGAGCAACAATCTCATGG CAAGCATGCAGGGTTACCATCATCACCCAGCAGCCACGGCGGCGATGATGAACAACCTGA GGGGTCTAAACAACAACATGATGATGATGCATCAGCCACAACAGCAGCCACAGATGATGT ACCACCGGTCTCCTCAGATTAGCCCTTACACCGCCTACTACAACCCTTACAGCTACTACT ACCACCCTGGCGCCGCCGGTTATCATCCCGCCAGCAATGGCGATGTGGAGACCATGTTCA GCGATGAGAATACCAAGGGTTGTGTTGTCATGTAGTAGGGATGCTGTTACAGTGTTACAA TGTAGAGGTTGGTGATGAAGCATGGGAATGGTTATGCAATCCTACTGTTTTTTTCTTCTT CTTTTTCTTCATTGTTTTTCTGCTTTTATTGGTTTCTCCTGTATCAAGAATGAATCATGC ATGTTGACTTAGATGTCGTGTTTGAAAGTAGTAGCACTTCAGAGGATGATCAAAAGTGTA ATGTAATAGTTTTACCGCCTAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTGCAG GTCGCGGCCGCTAGACT



consensusID : consensus_8902#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1655
fasta sequence
                              [CAAGAACCACCATCACTTCCCTACCACTCCACTACTAGCCACTGGCCATTGCTCCTCTCCTCCCACTCTTCTTCTCCATCTCCTCTCCTCTCTTCTCTCATTCTCTTCCCTGCAACTTGCAAACAGTGCTCTGCAGAATGACCAAAGATGAGGATTTCAAGCTGGTCAAGATCCAGACCCATGTACTGAGGGTGAACATACACTGTGATGGCTGTAAGCACAAGGTGAAGAAGCTGCTTCAGAAGATTGAAGGCGTGTACTCGGTGGCCTTAGATGTAGACAACCATAAGGTCACAGTGACTGGCAATGTGGACTCCGATACATTGATTAGGAAGCTCACCAGAGGAGGTAAGCATGCAGAGCTGTGGTCACAGCAGAAGGGTGGCAGCAACCAGGGCCACAGGGGCAGCAACAACCAGCAGAAGCAGCAGCAGCAGCAAGGGCAGCAGCAGCATGGACAGCAGCATCAGAAGCAAGGTGCCAACCCAAGCAAGGATGGCAACAAGAACAACAACATCCTCAAGGACCAGGGCAAGCAAGGAGGTGTTGGAGGCCTCATCCAGGGCCTCAAGGCCTTCAAGAACCAGCACAGCAAGAACCAGCTCCCTGAGCTTGATTCAGAGGATGATGACTTGTATGATGACGAAGACGATGAGTTTGATGATGACTATGAGGACGATCTCCGCTTTCTTGGAGACAAGATGAGCCAGCTTGGTTTCCTCAGGCAGCAAGCTGCAGCTGCAGCGGCGGCCAATGTCAAGAACAAGAATGCCAACACTGCCACCGTCAACAACCACCACAACAACGTCAATGGCAAGAAAGGTGGTGGCGGCGGTGGCAGTGCTGGAGGTGGAAATCACCATCAGAACAACCACCACCAGAACCAGAAGAATCCCAATGTGATCAACATGGCAGCAGCCAATGCCAAGATGGCCAATGGTGCCCAGAAGAACACTGGCGCCATCAATGGAATGATGGGCCTCAACCATGGCCTCGGAACAGCCGGTGCCACTCCTGGTTTTCAGGGCTACACCGGCTTCAACCACCCGTCCTATGCTTCTGCCGGCTATGGAGGGCTTCAACAACAGCACCTCCAGCAACAACAGCAGAGCAACAATCTCATGGCAAGCATGCAGGGTTACCATCATCACCCAGCAGCCACGGCGGCGATGATGAACAACCTGAGGGGTCTAAACAACAACATGATGATGATGCATCAGCCACAACAGCAGCCACAGATGATGTACCACCGGTCTCCTCAGATTAGCCCTTACACCGCCTACTACAACCCTTACAGCTACTACTACCACCCTGGCGCCGCCGGTTATCATCCCGCCAGCAATGGCGATGTGGAGACCATGTTCAGCGATGAGAATACCAAGGGTTGTGTTGTCATGTAGTAGGGATGCTGTTACAGTGTTACAATGTAGAGGTTGGTGATGAAGCATGGGAATGGTTATGCAATCCTACTGTTTTTTTCTTCTTCTTTTTCTTCATTGTTTTTCTGCTTTTATTGGTTTCTCCTGTATCAAGAATGAATCATGCATGTTGACTTAGATGTCGTGTTTGAAAGTAGTAGCACTTCAGAGGATGATCAAAGTGTAATGTAATAGTTTTACCGCCTAGTGCTTTGCCCTGCCTGGCTTCTAAAAAAA]

[+] EMBL AK103550             [CAAGAACCACCATCACTTCCCTACCACTCCACTACTAGCCACTGGCCATTGCTCCTCTCCTCCCACTCTTCTTCTCCATCTCCTCTCCTCTCTTCTCTCATTCTCTTCCCTGCAACTTGCAAACAGTGCTCTGCAGAATGACCAAAGATGAGGATTTCAAGCTGGTCAAGATCCAGACCCATGTACTGAGGGTGAACATACACTGTGATGGCTGTAAGCACAAGGTGAAGAAGCTGCTTCAGAAGATTGAAGGCGTGTACTCGGTGGCCTTAGATGTAGACAACCATAAGGTCACAGTGACTGGCAATGTGGACTCCGATACATTGATTAGGAAGCTCACCAGAGGAGGTAAGCATGCAGAGCTGTGGTCACAGCAGAAGGGTGGCAGCAACCAGGGCCACAGGGGCAGCAACAACCAGCAGAAGCAGCAGCAGCAGCAAGGGCAGCAGCAGCATGGACAGCAGCATCAGAAGCAAGGTGCCAACCCAAGCAAGGATGGCAACAAGAACAACAACATCCTCAAGGACCAGGGCAAGCAAGGAGGTGTTGGAGGCCTCATCCAGGGCCTCAAGGCCTTCAAGAACCAGCACAGCAAGAACCAGCTCCCTGAGCTTGATTCAGAGGATGATGACTTGTATGATGACGAAGACGATGAGTTTGATGATGACTATGAGGACGATCTCCGCTTTCTTGGAGACAAGATGAGCCAGCTTGGTTTCCTCAGGCAGCAAGCTGCAGCTGCAGCGGCGGCCAATGTCAAGAACAAGAATGCCAACACTGCCACCGTCAACAACCACCACAACAACGTCAATGGCAAGAAAGGTGGTGGCGGCGGTGGCAGTGCTGGAGGTGGAAATCACCATCAGAACAACCACCACCAGAACCAGAAGAATCCCAATGTGATCAACATGGCAGCAGCCAATGCCAAGATGGCCAATGGTGCCCAGAAGAACACTGGCGCCATCAATGGAATGATGGGCCTCAACCATGGCCTCGGAACAGCCGGTGCCACTCCTGGTTTTCAGGGCTACACCGGCTTCAACCACCCGTCCTATGCTTCTGCCGGCTATGGAGGGCTTCAACAACAGCACCTCCAGCAACAACAGCAGAGCAACAATCTCATGGCAAGCATGCAGGGTTACCATCATCACCCAGCAGCCACGGCGGCGATGATGAACAACCTGAGGGGTCTAAACAACAACATGATGATGATGCATCAGCCACAACAGCAGCCACAGATGATGTACCACCGGTCTCCTCAGATTAGCCCTTACACCGCCTACTACAACCCTTACAGCTACTACTACCACCCTGGCGCCGCCGGTTATCATCCCGCCAGCAATGGCGATGTGGAGACCATGTTCAGCGATGAGAATACCAAGGGTTGTGTTGTCATGTAGTAGGGATGCTGTTACAGTGTTACAATGTAGAGGTTGGTGATGAAGCATGGGA                                                                                                                                                                                                           ]
[+] EMBL OSAA31901            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CACTCCTGGTTTTCAGGGCTACACCGGCTTCAACCACCCGTCCTATGCTTCTGCCGGCTATGGAGGGCTTCAACAACAGCACCTCCAGCAACAACAGCAGAGCAACAATCTCATGGCAAGCATGCAGGGTTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BI806765             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGCTTCAACAACAGCACCTCCAGCAACAACAGCAGAGCAACAATCTCATGGCAAGCATGCAGGGTTACCATCATCACCCAGCAGCCACGGCGGCGATGATGAACAACCTGAGGGGTCTAAACAACAACATGATGATGATGCATCAGCCACAACAGCAGCCACAGATGATGTACCACCGGTCTCCTCAGATTAGCCCTTACACCGCCTACTACAACCCTTACAGCTACTACTACCACCCTGGCGCCGCCGGTTATCATCCCGCCAGCAATGGCGATGTGGAGACCATGTTCAGCGATGAGAATACCAAGGGTTGTGTTGTCATGTAGTAGGGATGCTGTTACAGTGTTACAATGTAGAGGTTGGTGATGAAGCATGGGAATGGTTATGCAATCCTACTGTTTTTTTCTTCTTCTTTTTCTTCATTGTTTTTCTGCTTTTATTGGTTTCTCCTGTATCAAGAATGAATCATGCATGTTGACTTAGATGTCGTGTTTGAAAGTAGTAGCACTTCAGAGGATGATCAAAGTGTAATGTAATAGTTTTACCGCCTAGTGCTTTGCCCTGCCTGGCTTCTAAAAAAA]
[-] EMBL OSAA31900            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATGATGATGCATCAGCCACAACAGCAGCCACAGATGATGTACCACCGGTCTCCTCAGATTAGCCCTTACACCGCNTACTACAACCCTTACAGCTANTACTACCACCCTGGCGCCGCCGGTTATCATCCCGCCAGCAATGGCGATGTGGAGACCATGTTCAGCGATGAGAATACCAAGGGTTGTGTTGTCATGTAGTAGGGATGCTGTTACAGTGTTACAATGTAGAGGTTGGTGATGAAGCATGGGAATGGTTATGCAATCCTACTGTTTTTTTCTTCTTCTTTTTCTTCATTGTTTTTCTGCTTTTATTGGTTTCTCCTGTATCAAGAATGAATCATG                                                                                                               ]


>consensus_8902#1 CAAGAACCACCATCACTTCCCTACCACTCCACTACTAGCCACTGGCCATTGCTCCTCTCC TCCCACTCTTCTTCTCCATCTCCTCTCCTCTCTTCTCTCATTCTCTTCCCTGCAACTTGC AAACAGTGCTCTGCAGAATGACCAAAGATGAGGATTTCAAGCTGGTCAAGATCCAGACCC ATGTACTGAGGGTGAACATACACTGTGATGGCTGTAAGCACAAGGTGAAGAAGCTGCTTC AGAAGATTGAAGGCGTGTACTCGGTGGCCTTAGATGTAGACAACCATAAGGTCACAGTGA CTGGCAATGTGGACTCCGATACATTGATTAGGAAGCTCACCAGAGGAGGTAAGCATGCAG AGCTGTGGTCACAGCAGAAGGGTGGCAGCAACCAGGGCCACAGGGGCAGCAACAACCAGC AGAAGCAGCAGCAGCAGCAAGGGCAGCAGCAGCATGGACAGCAGCATCAGAAGCAAGGTG CCAACCCAAGCAAGGATGGCAACAAGAACAACAACATCCTCAAGGACCAGGGCAAGCAAG GAGGTGTTGGAGGCCTCATCCAGGGCCTCAAGGCCTTCAAGAACCAGCACAGCAAGAACC AGCTCCCTGAGCTTGATTCAGAGGATGATGACTTGTATGATGACGAAGACGATGAGTTTG ATGATGACTATGAGGACGATCTCCGCTTTCTTGGAGACAAGATGAGCCAGCTTGGTTTCC TCAGGCAGCAAGCTGCAGCTGCAGCGGCGGCCAATGTCAAGAACAAGAATGCCAACACTG CCACCGTCAACAACCACCACAACAACGTCAATGGCAAGAAAGGTGGTGGCGGCGGTGGCA GTGCTGGAGGTGGAAATCACCATCAGAACAACCACCACCAGAACCAGAAGAATCCCAATG TGATCAACATGGCAGCAGCCAATGCCAAGATGGCCAATGGTGCCCAGAAGAACACTGGCG CCATCAATGGAATGATGGGCCTCAACCATGGCCTCGGAACAGCCGGTGCCACTCCTGGTT TTCAGGGCTACACCGGCTTCAACCACCCGTCCTATGCTTCTGCCGGCTATGGAGGGCTTC AACAACAGCACCTCCAGCAACAACAGCAGAGCAACAATCTCATGGCAAGCATGCAGGGTT ACCATCATCACCCAGCAGCCACGGCGGCGATGATGAACAACCTGAGGGGTCTAAACAACA ACATGATGATGATGCATCAGCCACAACAGCAGCCACAGATGATGTACCACCGGTCTCCTC AGATTAGCCCTTACACCGCCTACTACAACCCTTACAGCTACTACTACCACCCTGGCGCCG CCGGTTATCATCCCGCCAGCAATGGCGATGTGGAGACCATGTTCAGCGATGAGAATACCA AGGGTTGTGTTGTCATGTAGTAGGGATGCTGTTACAGTGTTACAATGTAGAGGTTGGTGA TGAAGCATGGGAATGGTTATGCAATCCTACTGTTTTTTTCTTCTTCTTTTTCTTCATTGT TTTTCTGCTTTTATTGGTTTCTCCTGTATCAAGAATGAATCATGCATGTTGACTTAGATG TCGTGTTTGAAAGTAGTAGCACTTCAGAGGATGATCAAAGTGTAATGTAATAGTTTTACC GCCTAGTGCTTTGCCCTGCCTGGCTTCTAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8902#0      TTCCTCGAGCACTGTTGGCCTACTGGATCACTTCCCTACCACTCCACTACTAGCCACTGG 60
consensus_8902#1      -------------CAAGAACCACC--ATCACTTCCCTACCACTCCACTACTAGCCACTGG 45
                                      *  * **   **********************************

consensus_8902#0      CCATTGCTCCTCTCCTCCCACTCTTCTTCTCCATCTCCTCTCCTCTCTTCTCTCATTCTC 120
consensus_8902#1      CCATTGCTCCTCTCCTCCCACTCTTCTTCTCCATCTCCTCTCCTCTCTTCTCTCATTCTC 105
                      ************************************************************

consensus_8902#0      TTCCCTGCAACTTGCAAACAGTGCTCTGCAGAATGACCAAAGATGAGGATTTCAAGCTGG 180
consensus_8902#1      TTCCCTGCAACTTGCAAACAGTGCTCTGCAGAATGACCAAAGATGAGGATTTCAAGCTGG 165
                      ************************************************************

consensus_8902#0      TCAAGATCCAGACCCATGTACTGAGGGTGAACATACACTGTGATGGCTGTAAGCACAAGG 240
consensus_8902#1      TCAAGATCCAGACCCATGTACTGAGGGTGAACATACACTGTGATGGCTGTAAGCACAAGG 225
                      ************************************************************

consensus_8902#0      TGAAGAAGCTGCTTCAGAAGATTGAAGGCGTGTACTCGGTGGCCTTAGATGTAGACAACC 300
consensus_8902#1      TGAAGAAGCTGCTTCAGAAGATTGAAGGCGTGTACTCGGTGGCCTTAGATGTAGACAACC 285
                      ************************************************************

consensus_8902#0      ATAAGGTCACAGTGACTGGCAATGTGGACTCCGATACATTGATTAGGAAGCTCACCAGAG 360
consensus_8902#1      ATAAGGTCACAGTGACTGGCAATGTGGACTCCGATACATTGATTAGGAAGCTCACCAGAG 345
                      ************************************************************

consensus_8902#0      GAGGTAAGCATGCAGAGCTGTGGTCACAGCAGAAGGGTGGCAGCAACCAGGGCCACAAGG 420
consensus_8902#1      GAGGTAAGCATGCAGAGCTGTGGTCACAGCAGAAGGGTGGCAGCAACCAGGGCCACAGGG 405
                      ********************************************************* **

consensus_8902#0      GCAGCAACAACCAGCAGAAGCAGCAGCAGCAGCAAGGGCAGCAGCAGCATGGACAGCAGC 480
consensus_8902#1      GCAGCAACAACCAGCAGAAGCAGCAGCAGCAGCAAGGGCAGCAGCAGCATGGACAGCAGC 465
                      ************************************************************

consensus_8902#0      ATCAGAAGCAAGGTGCCAACCCAAGCAAGGATGGCAACAAGAACAACAACATCCTCAAGG 540
consensus_8902#1      ATCAGAAGCAAGGTGCCAACCCAAGCAAGGATGGCAACAAGAACAACAACATCCTCAAGG 525
                      ************************************************************

consensus_8902#0      ACCAGGGCAAGCAAGGAGGTGTTGGAGGCCTCATCCAGGGCCTCAAGGCCTTCAAGAACC 600
consensus_8902#1      ACCAGGGCAAGCAAGGAGGTGTTGGAGGCCTCATCCAGGGCCTCAAGGCCTTCAAGAACC 585
                      ************************************************************

consensus_8902#0      AGCACAGCAAGAACCAGCTCCCTGAGCTTGATTCAGAGGATGATGACTTGTATGATGACG 660
consensus_8902#1      AGCACAGCAAGAACCAGCTCCCTGAGCTTGATTCAGAGGATGATGACTTGTATGATGACG 645
                      ************************************************************

consensus_8902#0      AAGACGATGAGTTTGATGATGACTATGAGGACGATCTCCGCTTTCTTGGAGACAAGATGA 720
consensus_8902#1      AAGACGATGAGTTTGATGATGACTATGAGGACGATCTCCGCTTTCTTGGAGACAAGATGA 705
                      ************************************************************

consensus_8902#0      GCCAGCTTGGTTTCCTCAGGCAGCAAGCTGCAGCTGCAGCGGCGGCCAATGTCAAGAACA 780
consensus_8902#1      GCCAGCTTGGTTTCCTCAGGCAGCAAGCTGCAGCTGCAGCGGCGGCCAATGTCAAGAACA 765
                      ************************************************************

consensus_8902#0      AGAATGCCAACACTGCCACCGTCAACAACCACCACAACAACGTCAATGGCAAGAAAGGTG 840
consensus_8902#1      AGAATGCCAACACTGCCACCGTCAACAACCACCACAACAACGTCAATGGCAAGAAAGGTG 825
                      ************************************************************

consensus_8902#0      GTGGCGGCGGTGGCAGTGCTGGAGGTGGAAATCACCATCAGAACAACCACCACCAGAACC 900
consensus_8902#1      GTGGCGGCGGTGGCAGTGCTGGAGGTGGAAATCACCATCAGAACAACCACCACCAGAACC 885
                      ************************************************************

consensus_8902#0      AGAAGAATCCCAATGTGATCAACATGGCAGCAGCCAATGCCAAGATGGCCAATGGTGCCC 960
consensus_8902#1      AGAAGAATCCCAATGTGATCAACATGGCAGCAGCCAATGCCAAGATGGCCAATGGTGCCC 945
                      ************************************************************

consensus_8902#0      AGAAGAACACTGGCGCCATCAATGGAATGATGGGCCTCAACCATGGCCTCGGAACAGCCG 1020
consensus_8902#1      AGAAGAACACTGGCGCCATCAATGGAATGATGGGCCTCAACCATGGCCTCGGAACAGCCG 1005
                      ************************************************************

consensus_8902#0      GTGCCACTCCTGGTTTTCAGGGCTACACCGGCTTCAACCACCCGTCCTATGCTTCTGCCG 1080
consensus_8902#1      GTGCCACTCCTGGTTTTCAGGGCTACACCGGCTTCAACCACCCGTCCTATGCTTCTGCCG 1065
                      ************************************************************

consensus_8902#0      GCTATGGAGGGCTTCAACAACAGCACCTCCAGCAACAACAGCAGAGCAACAATCTCATGG 1140
consensus_8902#1      GCTATGGAGGGCTTCAACAACAGCACCTCCAGCAACAACAGCAGAGCAACAATCTCATGG 1125
                      ************************************************************

consensus_8902#0      CAAGCATGCAGGGTTACCATCATCACCCAGCAGCCACGGCGGCGATGATGAACAACCTGA 1200
consensus_8902#1      CAAGCATGCAGGGTTACCATCATCACCCAGCAGCCACGGCGGCGATGATGAACAACCTGA 1185
                      ************************************************************

consensus_8902#0      GGGGTCTAAACAACAACATGATGATGATGCATCAGCCACAACAGCAGCCACAGATGATGT 1260
consensus_8902#1      GGGGTCTAAACAACAACATGATGATGATGCATCAGCCACAACAGCAGCCACAGATGATGT 1245
                      ************************************************************

consensus_8902#0      ACCACCGGTCTCCTCAGATTAGCCCTTACACCGCCTACTACAACCCTTACAGCTACTACT 1320
consensus_8902#1      ACCACCGGTCTCCTCAGATTAGCCCTTACACCGCCTACTACAACCCTTACAGCTACTACT 1305
                      ************************************************************

consensus_8902#0      ACCACCCTGGCGCCGCCGGTTATCATCCCGCCAGCAATGGCGATGTGGAGACCATGTTCA 1380
consensus_8902#1      ACCACCCTGGCGCCGCCGGTTATCATCCCGCCAGCAATGGCGATGTGGAGACCATGTTCA 1365
                      ************************************************************

consensus_8902#0      GCGATGAGAATACCAAGGGTTGTGTTGTCATGTAGTAGGGATGCTGTTACAGTGTTACAA 1440
consensus_8902#1      GCGATGAGAATACCAAGGGTTGTGTTGTCATGTAGTAGGGATGCTGTTACAGTGTTACAA 1425
                      ************************************************************

consensus_8902#0      TGTAGAGGTTGGTGATGAAGCATGGGAATGGTTATGCAATCCTACTGTTTTTTTCTTCTT 1500
consensus_8902#1      TGTAGAGGTTGGTGATGAAGCATGGGAATGGTTATGCAATCCTACTGTTTTTTTCTTCTT 1485
                      ************************************************************

consensus_8902#0      CTTTTTCTTCATTGTTTTTCTGCTTTTATTGGTTTCTCCTGTATCAAGAATGAATCATGC 1560
consensus_8902#1      CTTTTTCTTCATTGTTTTTCTGCTTTTATTGGTTTCTCCTGTATCAAGAATGAATCATGC 1545
                      ************************************************************

consensus_8902#0      ATGTTGACTTAGATGTCGTGTTTGAAAGTAGTAGCACTTCAGAGGATGATCAAAAGTGTA 1620
consensus_8902#1      ATGTTGACTTAGATGTCGTGTTTGAAAGTAGTAGCACTTCAGAGGATGATCAAA-GTGTA 1604
                      ****************************************************** *****

consensus_8902#0      ATGTAATAGTTTTACCGCCTAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTGCAG 1680
consensus_8902#1      ATGTAATAGTTTTACCGCCTAGTGCTTT--------GCCCTGCCTGGCTTCTAAAAAAA- 1655
                      *********************                  *  * **   ** *     * 

consensus_8902#0      GTCGCGGCCGCTAGACT 1697
consensus_8902#1      -----------------
                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)