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Oryza sativa
cluster # 8906 cluster # 8906       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8906#0 length = 1616 sequences # 1  
consensus_8906#1 length = 1245 sequences # 5  

consensusID : consensus_8906#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1616
fasta sequence
                              [GAAACCCCAAAACCCCCACGTCCTCCTCCTCCGCCGCCGCCGCCGCCACCGTCGCCGTCGACGAGCCATGCCGCCGCGGAAGCGCCCGCCGCCGCCGGCCAAGGCGCCGGAAGCCCCACCGGAAACCAAGCCCAAGATCTCTCCGCCCGCTAAACCCATCGCCGCGGCGCCGCCGCCGCCGAAGGCGGTCCTCTCGGACACCGTCCTCGCCGCCTTGTCGCAGCACGAGCGCCCCATCTACAAGCCCGTGTTCGCCGGCGGGGACAAGGGCATGTCGCAGACGGAGATCCGGATCAAGACCGGGATGCCGACGAGCACCCTCACCAAGCACCTCCGCGACCTCAGGGCAGGGAGGGTGTGCTACCGGAGGGGCGGCCCGGTGCAGGGCGGCATGATGGAGAGGATCCCGTGTGGAGTTTGCCCCAGGATCGATGAGTGCTCGCCGGATGGCGTTATCTCGCCGAGCACCTGCGTCTACTACAAGAAGTGGCTGCAGATGGACTTCTAGGTGCTTTAATCTTCTGTGTAGCAAGCTGATCAACTAACATGTATTCAGAGAAATGGGACAAGCTGCTGATAGGCTAATTCATGAAAATAATTGTTTTGTCCAAGAACATGGGAGTTGACATATTCTTCTTTTATGGTTTGTACTGTCATTTGGCTTACATGTTAGTTGTGTCATCATCTTCATCACTCATCAGTCTCAAATCACCTTAAGATGTGTGCACTGCATCTGAAGGTGATGCACTCTTATGACTTATAAGTTGTGAGTCTTTCATAGAACTATCCACAATTCCATATTATTCATATTGATGCACTGTTGGCGAATCCTAGATTTTGCTTCCAACTTGGAGGTTGAGTTCCATGCTTGCTTCTGTCCATACTAGGTGACTGAATCTTATGTTACTGCAAATAAAATCTCGAGGTAATTTGCATTTTATCTGGTAAATATACAACCGGGTGTCCTTCATAAAGGATTTTTCTGACAATGCTTAACTTGTGTTGCATCCTGGAGCATCATTTGCAGCCATTTCTGAAGGTGAGTAAGTGACTTCCATTGGAATTCAATCAAAATTTGAAAAGCGACATCTGATGAAGATCTCAGACGCCTTTAAAGTGACAAGCTCCACGTTGGGCGTTTTCTTGTACGCTTCTATGGTTGTGCTGGGCCAAGCGCAAGGAAGAGCAACAGTCTGAGTCAGGTCATGTCTCATGCCTCCTGCTGCTGCTGCATTGTCAAACCGGGAGAAAGTGATGGCCATCTCTGAAACAAGCTTACCTGCTAATCTTTAGCAATGAGCGCGATCTGCACCTGGCGGCTGTGTTTAATTTGCCTTTGCATTGCATACATATTGAAGCAGCTCCGAAGCTACGGAAAAAGTGCGGTTGCTTTAGGTTAATCTTCGCTCACCAGTGACGTTTTTTATTCCGATTTAACCCGTGTTGTGTAGTATTTGTTAGTGCTTGGTTATATATGTCAACTTTGAGGTGCAGTTCTGGGTGAAAACGGAAATACTGTATTTTCCATCAGCTGTAGGCTTCTCATTTGGTTCTGACCACATGTGCTGTGTACGCATATGAACTACTTGTTGCAAATTGCAATATGGGGTATTGAC]

[+] EMBL AK106905             [GAAACCCCAAAACCCCCACGTCCTCCTCCTCCGCCGCCGCCGCCGCCACCGTCGCCGTCGACGAGCCATGCCGCCGCGGAAGCGCCCGCCGCCGCCGGCCAAGGCGCCGGAAGCCCCACCGGAAACCAAGCCCAAGATCTCTCCGCCCGCTAAACCCATCGCCGCGGCGCCGCCGCCGCCGAAGGCGGTCCTCTCGGACACCGTCCTCGCCGCCTTGTCGCAGCACGAGCGCCCCATCTACAAGCCCGTGTTCGCCGGCGGGGACAAGGGCATGTCGCAGACGGAGATCCGGATCAAGACCGGGATGCCGACGAGCACCCTCACCAAGCACCTCCGCGACCTCAGGGCAGGGAGGGTGTGCTACCGGAGGGGCGGCCCGGTGCAGGGCGGCATGATGGAGAGGATCCCGTGTGGAGTTTGCCCCAGGATCGATGAGTGCTCGCCGGATGGCGTTATCTCGCCGAGCACCTGCGTCTACTACAAGAAGTGGCTGCAGATGGACTTCTAGGTGCTTTAATCTTCTGTGTAGCAAGCTGATCAACTAACATGTATTCAGAGAAATGGGACAAGCTGCTGATAGGCTAATTCATGAAAATAATTGTTTTGTCCAAGAACATGGGAGTTGACATATTCTTCTTTTATGGTTTGTACTGTCATTTGGCTTACATGTTAGTTGTGTCATCATCTTCATCACTCATCAGTCTCAAATCACCTTAAGATGTGTGCACTGCATCTGAAGGTGATGCACTCTTATGACTTATAAGTTGTGAGTCTTTCATAGAACTATCCACAATTCCATATTATTCATATTGATGCACTGTTGGCGAATCCTAGATTTTGCTTCCAACTTGGAGGTTGAGTTCCATGCTTGCTTCTGTCCATACTAGGTGACTGAATCTTATGTTACTGCAAATAAAATCTCGAGGTAATTTGCATTTTATCTGGTAAATATACAACCGGGTGTCCTTCATAAAGGATTTTTCTGACAATGCTTAACTTGTGTTGCATCCTGGAGCATCATTTGCAGCCATTTCTGAAGGTGAGTAAGTGACTTCCATTGGAATTCAATCAAAATTTGAAAAGCGACATCTGATGAAGATCTCAGACGCCTTTAAAGTGACAAGCTCCACGTTGGGCGTTTTCTTGTACGCTTCTATGGTTGTGCTGGGCCAAGCGCAAGGAAGAGCAACAGTCTGAGTCAGGTCATGTCTCATGCCTCCTGCTGCTGCTGCATTGTCAAACCGGGAGAAAGTGATGGCCATCTCTGAAACAAGCTTACCTGCTAATCTTTAGCAATGAGCGCGATCTGCACCTGGCGGCTGTGTTTAATTTGCCTTTGCATTGCATACATATTGAAGCAGCTCCGAAGCTACGGAAAAAGTGCGGTTGCTTTAGGTTAATCTTCGCTCACCAGTGACGTTTTTTATTCCGATTTAACCCGTGTTGTGTAGTATTTGTTAGTGCTTGGTTATATATGTCAACTTTGAGGTGCAGTTCTGGGTGAAAACGGAAATACTGTATTTTCCATCAGCTGTAGGCTTCTCATTTGGTTCTGACCACATGTGCTGTGTACGCATATGAACTACTTGTTGCAAATTGCAATATGGGGTATTGAC]


>consensus_8906#0 GAAACCCCAAAACCCCCACGTCCTCCTCCTCCGCCGCCGCCGCCGCCACCGTCGCCGTCG ACGAGCCATGCCGCCGCGGAAGCGCCCGCCGCCGCCGGCCAAGGCGCCGGAAGCCCCACC GGAAACCAAGCCCAAGATCTCTCCGCCCGCTAAACCCATCGCCGCGGCGCCGCCGCCGCC GAAGGCGGTCCTCTCGGACACCGTCCTCGCCGCCTTGTCGCAGCACGAGCGCCCCATCTA CAAGCCCGTGTTCGCCGGCGGGGACAAGGGCATGTCGCAGACGGAGATCCGGATCAAGAC CGGGATGCCGACGAGCACCCTCACCAAGCACCTCCGCGACCTCAGGGCAGGGAGGGTGTG CTACCGGAGGGGCGGCCCGGTGCAGGGCGGCATGATGGAGAGGATCCCGTGTGGAGTTTG CCCCAGGATCGATGAGTGCTCGCCGGATGGCGTTATCTCGCCGAGCACCTGCGTCTACTA CAAGAAGTGGCTGCAGATGGACTTCTAGGTGCTTTAATCTTCTGTGTAGCAAGCTGATCA ACTAACATGTATTCAGAGAAATGGGACAAGCTGCTGATAGGCTAATTCATGAAAATAATT GTTTTGTCCAAGAACATGGGAGTTGACATATTCTTCTTTTATGGTTTGTACTGTCATTTG GCTTACATGTTAGTTGTGTCATCATCTTCATCACTCATCAGTCTCAAATCACCTTAAGAT GTGTGCACTGCATCTGAAGGTGATGCACTCTTATGACTTATAAGTTGTGAGTCTTTCATA GAACTATCCACAATTCCATATTATTCATATTGATGCACTGTTGGCGAATCCTAGATTTTG CTTCCAACTTGGAGGTTGAGTTCCATGCTTGCTTCTGTCCATACTAGGTGACTGAATCTT ATGTTACTGCAAATAAAATCTCGAGGTAATTTGCATTTTATCTGGTAAATATACAACCGG GTGTCCTTCATAAAGGATTTTTCTGACAATGCTTAACTTGTGTTGCATCCTGGAGCATCA TTTGCAGCCATTTCTGAAGGTGAGTAAGTGACTTCCATTGGAATTCAATCAAAATTTGAA AAGCGACATCTGATGAAGATCTCAGACGCCTTTAAAGTGACAAGCTCCACGTTGGGCGTT TTCTTGTACGCTTCTATGGTTGTGCTGGGCCAAGCGCAAGGAAGAGCAACAGTCTGAGTC AGGTCATGTCTCATGCCTCCTGCTGCTGCTGCATTGTCAAACCGGGAGAAAGTGATGGCC ATCTCTGAAACAAGCTTACCTGCTAATCTTTAGCAATGAGCGCGATCTGCACCTGGCGGC TGTGTTTAATTTGCCTTTGCATTGCATACATATTGAAGCAGCTCCGAAGCTACGGAAAAA GTGCGGTTGCTTTAGGTTAATCTTCGCTCACCAGTGACGTTTTTTATTCCGATTTAACCC GTGTTGTGTAGTATTTGTTAGTGCTTGGTTATATATGTCAACTTTGAGGTGCAGTTCTGG GTGAAAACGGAAATACTGTATTTTCCATCAGCTGTAGGCTTCTCATTTGGTTCTGACCAC ATGTGCTGTGTACGCATATGAACTACTTGTTGCAAATTGCAATATGGGGTATTGAC



consensusID : consensus_8906#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1245
fasta sequence
                              [GAAACCCCAAAACCCCCACGTCCTCCTCCTCCGCCGCCGCCGCCGCCACCGTCGCCGTCGACGAGCCATGCCGCCGCGGAAGCGCCCGCCGCCGCCGGCCAAGGCGCCGGAAGCCCCACCGGAAACCAAGCCCAAGATCTCTCCGCCCGCTAAACCCATCGCCGCGGCGCCGCCGCCGCCGAAGGCGGTCCTCTCGGACACCGTCCTCGCCGCCTTGTCGCAGCACGAGCGCCCCATCTACAAGCTCGTGTTCGCCGGCGGGGACAAGGGCATGTCGCAGACGGAGATCCGGATCAAGACCGGGATGCCGACGAGCACCCTCACCAAGCACCTCCGCGGCCTCACCTCCAAGGGCGTCCTCAAGGTGGTCAACAGCGTCCACAAGCGCGCCGAGAAGATCTACATGGACGTCCGCATCGACCCGTCGCCGGAGATCACCGGGGGAACCTGGTACCGCAACGGCCAGCTCGACTCCGACGCCGTCGCCTCCGCGCGGCGCAGGTGCCTCGACCAGATCGACAAGCTCGGCGTCGCCACGGCGGAGTCCATCCACGAGGGCATCAGCAGGGAATGCTCCAACCTAGCCTACTCGACCGAGCAGGTCAGGGACATCCTGCGCACCATGGCGCTCGACAGGGAGGTCGAGGAGGTGAGGAGCACCGGGGCGGGGGAGTTCGGCGACCTCAGGGCAGGGAGGGTGTGCTACCGGAGGGGCGGCCCGGTGCAGGGCGGCATGATGGAGAGGATCCCGTGTGGAGTTTGCCCCAGGATCGATGAGTGCTCGCCGGATGGCGTTATCTCGCCGAGCACCTGCGTCTACTACAAGAAGTGGCTGCAGATGGACTTCTAGGTGGTGAGCTCTCTT-CCGCGCCGCTGTTTATGGTGCGATCGCACGCACAATTCAGCTTCCAATTGCTCAATTGGCATTTGATCTATGCTATGGAATTGCCACAGTTCATACATTGCGGCATGTGATCCCGGATAGGCCCATGAGATAGACATACTAGATGATATCATCTGATTATCTTATGTTTGTATTTAAATTAGTAAGATTTGTTTCTATAATCATTATTACTTAGCCTTTTCCCCTGTTAGTC-TTTCTCATGTATTTATCTGCAACAAGTTTAGAAACCTGTCCAACATCAATATTCCAAATTCTAGGGTGCGTGAGAGTTTCATCCATTGTTACTCAATCATAATATGGGACCTGAGCACAATAAAGCAATTGCTTCTTTAAAAAAAAAA]

[+] EMBL AK102325             [GAAACCCCAAAACCCCCACGTCCTCCTCCTCCGCCGCCGCCGCCGCCACCGTCGCCGTCGACGAGCCATGCCGCCGCGGAAGCGCCCGCCGCCGCCGGCCAAGGCGCCGGAAGCCCCACCGGAAACCAAGCCCAAGATCTCTCCGCCCGCTAAACCCATCGCCGCGGCGCCGCCGCCGCCGAAGGCGGTCCTCTCGGACACCGTCCTCGCCGCCTTGTCGCAGCACGAGCGCCCCATCTACAAGCTCGTGTTCGCCGGCGGGGACAAGGGCATGTCGCAGACGGAGATCCGGATCAAGACCGGGATGCCGACGAGCACCCTCACCAAGCACCTCCGCGGCCTCACCTCCAAGGGCGTCCTCAAGGTGGTCAACAGCGTCCACAAGCGCGCCGAGAAGATCTACATGGACGTCCGCATCGACCCGTCGCCGGAGATCACCGGGGGAACCTGGTACCGCAACGGCCAGCTCGACTCCGACGCCGTCGCCTCCGCGCGGCGCAGGTGCCTCGACCAGATCGACAAGCTCGGCGTCGCCACGGCGGAGTCCATCCACGAGGGCATCAGCAGGGAATGCTCCAACCTAGCCTACTCGACCGAGCAGGTCAGGGACATCCTGCGCACCATGGCGCTCGACAGGGAGGTCGAGGAGGTGAGGAGCACCGGGGCGGGGGAGTTCGGCGACCTCAGGGCAGGGAGGGTGTGCTACCGGAGGGGCGGCCCGGTGCAGGGCGGCATGATGGAGAGGATCCCGTGTGGAGTTTGCCCCAGGATCGATGAGTGCTCGCCGGATGGCGTTATCTCGCCGAGCACCTGCGTCTACTACAAGAAGTGGCTGCAGATGGACTTCTAGGTGGTGAGCTCTCTT CCGCGCCGCTGTTTATGGTGCGATCGCACGCACAATTCAGCTTCCAATTGCTCAATTGGCATTTGATCTATGCTATGGAATTGCCACAGTTCATACATTGCGGCATGTGATCCCGGATAGGCCCATGAGATAGACATACTAGATGATATCATCTGATTATCTTATGTTTGTATTTAAATTAGTAAGATTTGTTTCTATAATCATTATTACTTAG                                                                                                                                                                       ]
[+] EMBL AK060002             [       CAAAACCCCCACGTCCTCCTCCTCCGCCGCCGCCGCCGCCACCGTCGCCGTCGACGAGCCATGCCGCCGCGGAAGCGCCCGCCGCCGCCGGCCAAGGCGCCGGAAGCCCCACCGGAAACCAAGCCCAAGATCTCTCCGCCCGCTAAACCCATCGCCGCGGCGCCGCCGCCGCCGAAGGCGGTCCTCTCGGACACCGTCCTCGCCGCCTTGTCGCAGCACGAGCGCCCCATCTACAAGCTCGTGTTCGCCGGCGGGGACAAGGGCATGTCGCAGACGGAGATCCGGATCAAGACCGGGATGCCGACGAGCACCCTCACCAAGCACCTCCGCGGCCTCACCTCCAAGGGCGTCCTCAAGGTGGTCAACAGCGTCCACAAGCGCGCCGAGAAGATCTACATGGACGTCCGCATCGACCCGTCGCCGGAGATCACCGGGGGAACCTGGTACCGCAACGGCCAGCTCGACTCCGACGCCGTCGCCTCCGCGCGGCGCAGGTGCCTCGACCAGATCGACAAGCTCGGCGTCGCCACGGCGGAGTCCATCCACGAGGGCATCAGCAGGGAATGCTCCAACCTAGCCTACTCGACCGAGCAGGTCAGGGACATCCTGCGCACCATGGCGCTCGACAGGGAGGTCGAGGAGGTGAGGAGCACCGGGGCGGGGGAGTTCGGCGACCTCAGGGCAGGGAGGGTGTGCTACCGGAGGGGCGGCCCGGTGCAGGGCGGCATGATGGAGAGGATCCCGTGTGGAGTTTGCCCCAGGATCGATGAGTGCTCGCCGGATGGCGTTATCTCGCCGAGCACCTGCGTCTACTACAAGAAGTGGCTGCAGATGGACTTCTAGGTGGTGAGCTCTCTT CCGCGCCGCTGTTTATGGTGCGATCGCACGCACAATTCAGCTTCCAATTGCTCAATTGGCATTTGATCTATGCTATGGAATTGCCACAGTTCATACATTGCGGCATGTGATCCCGGATAGGCCCATGAGATAGACATACTAGATGATATCATCTGATTATCTTATGTTTGTATTTAAATTAGTAAGATTTGTTTCTATAATCATTATTACTTAGCCTTTTCCCCTGTTAGTC TTTCTCATGTATTTATCTGCAACAAGTTTAGAAACCTGTCCAACATCAATATTCCAAATTCTAGGGTGCGTGAGAGTTTCATCCATTGTTACTCAATCATAATATGGGACCTGAGCACAATAAAGCAA                    ]
[+] EMBL AU097464             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTCAGNCCAGGGAGGGTGTGCTACCGGAGGGGCGGCCCGGTGCAGGGCGGCATGATGGAGAGGNTCCCGTGTGGAGTTTGCCCCAGGATCGATGAGTGCTCGCCGGATGGCGTTATCTCGCCGAGCA CTGCGTCTACTACAAGAAGTGGCTGCAGATGGACTTCTAGGTGGTGAGCTCTCTTCCCGCGCCGCTGTTTATGGTGCGATCGCACGCACAATTCAGCTTCCAATTGCTCAATTGGCATTTGATCTATGCTATGGAATTGCCACAGTTCATACATTGCGGCATGTGATCCCGGATAGGCCCATGAGATAGACATACTAGATGATATCATCTGATTATCTTATGTTTGTATTTAAATTAGTAAGATTTGTTTCTATAATCATTATTACTTAGCCTTTTCCCTTGTTAGTC TTTCTCATGTATTTATCTGCAACAAGTTTAGAAACCTGTCCAACATCAATATTCCAAATTCTAGGGTGCGTGAGAGTTTCATCCATTGTTACTCAATCATAATATGGGACCTGAGCACAATAAAGCAATTGCTTCTTTAAAAAAAA  ]
[+] EMBL AU166338             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACTACAAGAAGTGGCTGCAGATGGACTTCTAGGTGGTGAGCTCTCTT CCGCGCCGCTGTTTATGGTGCGATCGCACGCACAATTCAGCTTCCAATTGCTCAATTGGCATTTGATCTATGCTATGGAATTGCCACAGTTCATACATTGCGGCATGTGATCCCGGATAGGCCCATGAGATAGACATACTAGATGATATCATCTGATTATCTTATGTTTGTATTTAAATTAGTAAGATTTGTTTCTATAATCATTATTACTTAGCCTTTTCCCCTGTTAGTC TTTCTCATGTATTTATCTGCAACAAGTTTAGAAACCTGTCCAACATCAATATTCCAAATTCTAGGGTGCGTGAGAGTTTCATCCATTGTTACTCAATCATAATATGGGACCTGAGCACAATAAAGCAATTGCTTCTTTAAAAAAAAAA]
[-] EMBL BI306483             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACTTTTAGGCGGTGAGCTCTCTT CCGCGCCGCTGTTTATGGTGCGATCGCACGCACAATTCAGCTTCCAATTGCTCAATTGGCATTTGATCTATGCTATGGAATTGCCACAGTTCATACATTGCGGCATGTGATCCCGGATAGGCCCATGAGATAGACATACTAGATGATATCATCTGATTATCTTATGTTTGTATTTAAATTAGTAAGATTTGTTTCTATAATCATTATTACTTAGCCTTTTCCCCTGTTAGTCTTTTCTCATGTATTTATCTGCAA                                                                                                                              ]


>consensus_8906#1 GAAACCCCAAAACCCCCACGTCCTCCTCCTCCGCCGCCGCCGCCGCCACCGTCGCCGTCG ACGAGCCATGCCGCCGCGGAAGCGCCCGCCGCCGCCGGCCAAGGCGCCGGAAGCCCCACC GGAAACCAAGCCCAAGATCTCTCCGCCCGCTAAACCCATCGCCGCGGCGCCGCCGCCGCC GAAGGCGGTCCTCTCGGACACCGTCCTCGCCGCCTTGTCGCAGCACGAGCGCCCCATCTA CAAGCTCGTGTTCGCCGGCGGGGACAAGGGCATGTCGCAGACGGAGATCCGGATCAAGAC CGGGATGCCGACGAGCACCCTCACCAAGCACCTCCGCGGCCTCACCTCCAAGGGCGTCCT CAAGGTGGTCAACAGCGTCCACAAGCGCGCCGAGAAGATCTACATGGACGTCCGCATCGA CCCGTCGCCGGAGATCACCGGGGGAACCTGGTACCGCAACGGCCAGCTCGACTCCGACGC CGTCGCCTCCGCGCGGCGCAGGTGCCTCGACCAGATCGACAAGCTCGGCGTCGCCACGGC GGAGTCCATCCACGAGGGCATCAGCAGGGAATGCTCCAACCTAGCCTACTCGACCGAGCA GGTCAGGGACATCCTGCGCACCATGGCGCTCGACAGGGAGGTCGAGGAGGTGAGGAGCAC CGGGGCGGGGGAGTTCGGCGACCTCAGGGCAGGGAGGGTGTGCTACCGGAGGGGCGGCCC GGTGCAGGGCGGCATGATGGAGAGGATCCCGTGTGGAGTTTGCCCCAGGATCGATGAGTG CTCGCCGGATGGCGTTATCTCGCCGAGCACCTGCGTCTACTACAAGAAGTGGCTGCAGAT GGACTTCTAGGTGGTGAGCTCTCTTCCGCGCCGCTGTTTATGGTGCGATCGCACGCACAA TTCAGCTTCCAATTGCTCAATTGGCATTTGATCTATGCTATGGAATTGCCACAGTTCATA CATTGCGGCATGTGATCCCGGATAGGCCCATGAGATAGACATACTAGATGATATCATCTG ATTATCTTATGTTTGTATTTAAATTAGTAAGATTTGTTTCTATAATCATTATTACTTAGC CTTTTCCCCTGTTAGTCTTTCTCATGTATTTATCTGCAACAAGTTTAGAAACCTGTCCAA CATCAATATTCCAAATTCTAGGGTGCGTGAGAGTTTCATCCATTGTTACTCAATCATAAT ATGGGACCTGAGCACAATAAAGCAATTGCTTCTTTAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8906#0      GAAACCCCAAAACCCCCACGTCCTCCTCCTCCGCCGCCGCCGCCGCCACCGTCGCCGTCG 60
consensus_8906#1      GAAACCCCAAAACCCCCACGTCCTCCTCCTCCGCCGCCGCCGCCGCCACCGTCGCCGTCG 60
                      ************************************************************

consensus_8906#0      ACGAGCCATGCCGCCGCGGAAGCGCCCGCCGCCGCCGGCCAAGGCGCCGGAAGCCCCACC 120
consensus_8906#1      ACGAGCCATGCCGCCGCGGAAGCGCCCGCCGCCGCCGGCCAAGGCGCCGGAAGCCCCACC 120
                      ************************************************************

consensus_8906#0      GGAAACCAAGCCCAAGATCTCTCCGCCCGCTAAACCCATCGCCGCGGCGCCGCCGCCGCC 180
consensus_8906#1      GGAAACCAAGCCCAAGATCTCTCCGCCCGCTAAACCCATCGCCGCGGCGCCGCCGCCGCC 180
                      ************************************************************

consensus_8906#0      GAAGGCGGTCCTCTCGGACACCGTCCTCGCCGCCTTGTCGCAGCACGAGCGCCCCATCTA 240
consensus_8906#1      GAAGGCGGTCCTCTCGGACACCGTCCTCGCCGCCTTGTCGCAGCACGAGCGCCCCATCTA 240
                      ************************************************************

consensus_8906#0      CAAGCCCGTGTTCGCCGGCGGGGACAAGGGCATGTCGCAGACGGAGATCCGGATCAAGAC 300
consensus_8906#1      CAAGCTCGTGTTCGCCGGCGGGGACAAGGGCATGTCGCAGACGGAGATCCGGATCAAGAC 300
                      ***** ******************************************************

consensus_8906#0      CGGGATGCCGACGAGCACCCTCACCAAGCACCTCCGCGACCTCAGGGCAGGGAGGGTGTG 360
consensus_8906#1      CGGGATGCCGACGAGCACCCTCACCAAGCACCTCCGCGGCCTCA--CCTCCAAGGGCGTC 358
                      ************************************** *****   *    **** ** 

consensus_8906#0      CTACCGGAGGGGCGGCCCGGTGCAGGGCGGCATGATGGAGAGGATCCCGTGTGGAGTTTG 420
consensus_8906#1      CT-CAAGGTGGTCAACAGCGTCCACAAGCGCGCC---GAGAAGATCT-ACATGGA----- 408
                      ** *  *  ** *  *   ** **     **      **** ****     ****     

consensus_8906#0      CCCCAGGATCGATGAGTGCTCGCCGGATGGCGTTATCTCGCCGAGCACCTGCGTCTACTA 480
consensus_8906#1      CGTCCGCATCGACCCGT---CGCCGGAG------ATCACCGGGGGAACCTGG---TACCG 456
                      *  * * *****   **   *******       *** *   * * *****    ***  

consensus_8906#0      CAAGAAGTGGCTGCAGATGGACTTCTAGGTGCTTTAATCTTC-TGTGTAGCAAGCTGATC 539
consensus_8906#1      CAA----CGGC--CAGCTCGACTCC--GACGCCGTCGCCTCCGCGCGGCGCAGGTGCCTC 508
                      ***     ***  *** * **** *  *  **  *   ** *  * *  *** *    **

consensus_8906#0      AACTAACATGTATTCAGAGAAATGGGACAAGCTGCTGATAGGCTAATTCATGAAAATAAT 599
consensus_8906#1      GACCAGA------TCGACAAGCTCGGCGTCGCCACGGCGGAGTCCATCCACGAGGGCATC 562
                       ** *        **    *  * **    **  * *    *   ** ** **    *  

consensus_8906#0      TGTTTTGTCCAAGAACATGGGAGTTGACATATTCTTCTTTTATGGTTTGTACTGTCATTT 659
consensus_8906#1      -------------AGCAGGGAA----------TGCTCCAACCTAGCCTACTCGACCGAGC 599
                                   * ** ** *          *  **     * *  *   *   *    

consensus_8906#0      GGCTTACATGTTAGTTGTGTCATCATCTTCATCACTCATCAGTCTCAAATCACCTTAAGA 719
consensus_8906#1      AGGTCAGGGACATCCTGCG-CACCAT----GGCGCTCGACAGGG--AGGTCG----AGGA 648
                       * * *         ** * ** ***      * ***  ***    *  **     * **

consensus_8906#0      TGTGTGCACTGCATCTGAAGGTGATGCACTCTTATGACTTATAAGTTGTGAGTCTTTCAT 779
consensus_8906#1      GGTGAGGA--GCACCGG--GGCGGGGGAGTTCGGCGACCTCAGGGCAGGGAGGGTGT--- 701
                       *** * *  *** * *  ** *  * * *     *** *    *  * ***  * *   

consensus_8906#0      AGAACTATCCACAATTCCATATTATTCATATTGATGCACTGTTGGCGAATCC---TAGAT 836
consensus_8906#1      ---GCTACCGGAGGGGCGGCCCGGTGCAGGGCGGCATGATGGAGAGGATCCCGTGTGGAG 758
                          *** *       *       * **    *      **  *  **  **   * ** 

consensus_8906#0      TTTGCTTCCAACTTGGAGGTTGAGTTCCATGCTTGCTTCTGTCCATACTAGGTGACTGAA 896
consensus_8906#1      TTTGCCCCAGGATCGATGAGTG--CTCGCCGGATGGCGTTATCT-CGCCGAGCACCTGCG 815
                      *****  *    * *  *  **   **   *  **    * **    *   *   ***  

consensus_8906#0      TCTTATGTTACTGCAAATAAAATCTCGAGGTAATTTGCATTTTATCTGGTAAATATACAA 956
consensus_8906#1      TCT------ACTACAAGAAGTGGCT----GCAGATGGACTTCTAGGTGGTGAGCTCTCTT 865
                      ***      *** ***  *    **    * *  * *  ** **  **** *     *  

consensus_8906#0      CCGGGT-GTCCTTCATAAAG-GATTTTTCTGACAATGCTTAACTTGTGTTGCATCCTGGA 1014
consensus_8906#1      CCGCGCCGCTGTTTATGGTGCGATCGCACGCACAAT--TCAGCTTCCAAT---TGCTCAA 920
                      *** *  *   ** **   * ***    *  *****  * * ***    *   * **  *

consensus_8906#0      GCATCATTTGCAGCCATTTCTGAAGGTGAGTAAGTGACTTCCATTGGAATTCAATCAAAA 1074
consensus_8906#1      TTGGCATTTG-----ATCTATGC-------TATGGAATTGCCAC---AGTTCA------- 958
                          ******     ** * **        ** *  * * ***    * ****       

consensus_8906#0      TTTGAAAAGCGACATCTGATGAAGATCTCAGACGCCTTTAAAGTGACAAGCTCCACGTTG 1134
consensus_8906#1      --TACATTGCGGCATGTGATCCCGGAT--AGGC-CCATGAGATAGACATACTAGATGATA 1013
                        *  *  *** *** ****   *     ** * ** * * *  ****  **  * * * 

consensus_8906#0      GGCGTTTTCTTGTACGCTTCTATGGTTGTGCTGGGCCAAGCGCAAGGAAGAGCAACAGTC 1194
consensus_8906#1      T-CATCTGATTAT-----CTTATGTTTGTATTTAAATTAGTAAGATTTGTTTCTATAATC 1067
                        * * *  ** *       **** ****  *      **    *       * * * **

consensus_8906#0      TGAGTCAGGTCATGTCTCATGCCTCCTGCTGCTGCTGCATTGTCAAACCGGGAGAAAGTG 1254
consensus_8906#1      ATTATTACTTAGCCTTTT-CCCCTGTTAGTCTTTCTCATGTATTTATCTGCAACAAGTTT 1126
                          * *  *    * *    ***  *  *  * **    * *  * * *  * **  * 

consensus_8906#0      ATGGCCATCTCTGAAACAAGCTTACCTGCTAATCTTTAGCAATGAGCGCGATCTGCACCT 1314
consensus_8906#1      AGAAACCTGTCCAACATCAATATTCC----AAATTCTAG-GGTGCGTGAGAGTTTCATCC 1181
                      *    * * **  * *  *   * **    **  * ***   ** * * **  * ** * 

consensus_8906#0      GGCGGCTGTGTTTAATTTGCCTTTGCATTGCATACATATTGAAGCAGCTCCGAAGCTACG 1374
consensus_8906#1      ATTGT---TACTCAATCATAATATGGGACCTGAGCACAATAAAGCAATTGCTTCTTTAAA 1238
                         *    *  * ***     * **         ** * * *****  * *     **  

consensus_8906#0      GAAAAAGTGCGGTTGCTTTAGGTTAATCTTCGCTCACCAGTGACGTTTTTTATTCCGATT 1434
consensus_8906#1      AAAAAAA----------------------------------------------------- 1245
                       *****                                                      

consensus_8906#0      TAACCCGTGTTGTGTAGTATTTGTTAGTGCTTGGTTATATATGTCAACTTTGAGGTGCAG 1494
consensus_8906#1      ------------------------------------------------------------
                                                                                  

consensus_8906#0      TTCTGGGTGAAAACGGAAATACTGTATTTTCCATCAGCTGTAGGCTTCTCATTTGGTTCT 1554
consensus_8906#1      ------------------------------------------------------------
                                                                                  

consensus_8906#0      GACCACATGTGCTGTGTACGCATATGAACTACTTGTTGCAAATTGCAATATGGGGTATTG 1614
consensus_8906#1      ------------------------------------------------------------
                                                                                  

consensus_8906#0      AC 1616
consensus_8906#1      --
                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)