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Oryza sativa
cluster # 8907 cluster # 8907       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8907#0 length = 1874 sequences # 5  
consensus_8907#1 length = 812 sequences # 1  

consensusID : consensus_8907#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1874
fasta sequence
                              [CCCTCCATCTCTCTCTCCCCTCTCTCTCTCTCTCTCTCTCTCTCTGATCTGCAGAGCCGGAGCCCGGAGGCGCGGCTGCGGCTGCCAAGCCTCCTCCTCCTCCTCCAGCGCGCGGCCAGCGAGCAGCCTCGGAGGCCACCGCCGCCGCCTCCTCGCCCGGACGGCGGGGGAGCGGGCGGTGCTCCGTCCAGCGGAGCGAGCCCCCCCAATCTTGGCCGGAATCGGATTGAAGGATCTTGCGTTAGTTACTGTGCTGTTCGCTGGATGCTGGCAATGGGGTCAGAGGAGTGGGAGTTGTATCCATCTTCCTTCATTGGTGCTCAGGTCATAGATTATGGGCATGTTTCTGGAGACATGGATGATGATCAGAGTGGAGACTTGGCCGTGTCGATGGACGCCGTTCTCCCTGATGATCTTTTAGAAAAGGTCCTCTCCTTCTTGCCTGTTGCAAGTGTCATAAGATCTGGATCTGTTTGCAAGAGATGGCATGAGATTGTGCATGCCCGGAGGCAGACATGGAGCAAAATGGTGCCTCAGAAGCCTTGGTACTTCATGTTTACCTGCAGCGAGGAAGCGGTCTCGGGGTTCACCTATGACCCGAGCCTGCGTAAGTGGTATGGATTCGACTTCCCTTGCATTGAGAAGACCACCTGGTCGATTTCCTCATCGTCCGGGTTGGTGTGTCTGATGGACAGTGAGGATAGGAGCCGCATCATCGTGTGCAACCCAATAACTAAGGACTGGAAGAGGCTTGTTGATGCTCCTGGTGGCAAGTCGGCTGATTACAGTGCTCTCGCCATTTCTGTGACCAGGACCTCTCATCAGTACATGGTGGCTGTTGCAAGGTGCAACCAGGTGCCATCAGAGTATTATCAATGGGAGTTCACCATCCATTTGTACGAGTCAGAGATGAATACATGGGTGTCTCCCTTCACTGAACTATTGATTGGATGGCGAGGAGGTGATGAGTGCGTGATCTGTGATGGGGTCCTCTACTATCTGGTGTACTCAACAGGAGTTTTGGTGAATAACAACGAGCATCGCCATTGTCTTCTCATGTATGACCTATCTACCAGGCCTACTCACACTTCTTTGATGAGCATGGCTATACCAGTGCCGTGCCCTCTTACATGTGGCCGTTTGATGAACCTCAATGAGAGGCTTGTCTTGGTTGGGGGCATTGGCAAGCAAGATAGGCCTGGTATCATCAAGGGAATTGGCATCTGGGAGCTCCGGAACAAGGAGTGGCATGAGGTTGCTCGAATGCCTCACAAGTTTTTCCAAGGATTTGGCGAGTTCGATGATGTTTTTGCAAGCTGTGGGGCGGATGACCTTATCTATATTCAGAGCTATGGGTCACCGGCCCTCCTCACATTTGAATTAAACCAGAAGCTGTGGAAATGGTCACTGAAGAGCCCTGTGACGAAGAGGTTTCCTCTGCAGCTGTTTACTGGTTTCTCTTTTGAGCCTAGGCTGGACATTGCTTCCTAGTTTTATTTTGTTTCACTTCCACGGGAATTCTTGCATTATTTGCCTGGTTTGGAGTTACCAAGTGAAGAGATGATGTCATTGGAAGCCATTCGAGAAAGTGTTTCAGGTTTTATAGATCTATTCTATTTATTGCTGAGTATATCTTCTAATTGAAAGGGCGTCTAAACTTCCCTGTTTCATTTTTGTTGATTTGATGGTTGGATAATAGAGGGAGGGATGATGCCATACACAAGAACAATTCTTGCTGAATTGTGTTTTCTTTATTCTTATGTTGCCTGCAAACAAAGTGCCACTTCAGATGTCCCAAACCTAAAAGATTGTTACTTTCTTGATTTATAGTAGTCATTTGCGTTTGGGGTCCCCGCTGCTACTGATTTATNGTT]

[+] EMBL AK064350             [CCCTCCATCTCTCTCTCCCCTCTCTCTCTCTCTCTCTCTCTCTCTGATCTGCAGAGCCGGAGCCCGGAGGCGCGGCTGCGGCTGCCAAGCCTCCTCCTCCTCCTCCAGCGCGCGGCCAGCGAGCAGCCTCGGAGGCCACCGCCGCCGCCTCCTCGCCCGGACGGCGGGGGAGCGGGCGGTGCTCCGTCCAGCGGAGCGAGCCCCCCCAATCTTGGCCGGAATCGGATTGAAGGATCTTGCGTTAGTTACTGTGCTGTTCGCTGGATGCTGGCAATGGGGTCAGAGGAGTGGGAGTTGTATCCATCTTCCTTCATTGGTGCTCAGGTCATAGATTATGGGCATGTTTCTGGAGACATGGATGATGATCAGAGTGGAGACTTGGCCGTGTCGATGGACGCCGTTCTCCCTGATGATCTTTTAGAAAAGGTCCTCTCCTTCTTGCCTGTTGCAAGTGTCATAAGATCTGGATCTGTTTGCAAGAGATGGCATGAGATTGTGCATGCCCGGAGGCAGACATGGAGCAAAATGGTGCCTCAGAAGCCTTGGTACTTCATGTTTACCTGCAGCGAGGAAGCGGTCTCGGGGTTCACCTATGACCCGAGCCTGCGTAAGTGGTATGGATTCGACTTCCCTTGCATTGAGAAGACCACCTGGTCGATTTCCTCATCGTCCGGGTTGGTGTGTCTGATGGACAGTGAGGATAGGAGCCGCATCATCGTGTGCAACCCAATAACTAAGGACTGGAAGAGGCTTGTTGATGCTCCTGGTGGCAAGTCGGCTGATTACAGTGCTCTCGCCATTTCTGTGACCAGGACCTCTCATCAGTACATGGTGGCTGTTGCAAGGTGCAACCAGGTGCCATCAGAGTATTATCAATGGGAGTTCACCATCCATTTGTACGAGTCAGAGATGAATACATGGGTGTCTCCCTTCACTGAACTATTGATTGGATGGCGAGGAGGTGATGAGTGCGTGATCTGTGATGGGGTCCTCTACTATCTGGTGTACTCAACAGGAGTTTTGGTGAATAACAACGAGCATCGCCATTGTCTTCTCATGTATGACCTATCTACCAGGCCTACTCACACTTCTTTGATGAGCATGGCTATACCAGTGCCGTGCCCTCTTACATGTGGCCGTTTGATGAACCTCAATGAGAGGCTTGTCTTGGTTGGGGGCATTGGCAAGCAAGATAGGCCTGGTATCATCAAGGGAATTGGCATCTGGGAGCTCCGGAACAAGGAGTGGTATGAGGTTGCTCGAATGCCTCACAAGTTTTTCCAAGGATTTGGCGAGTTCGATGATGTTTTTGCAAGCTGTGGGGCGGATGACCTTATCTATATTCAGAGCTATGGGTCACCGGCCCTCCTCACATTTGAATTAAACCAGAAGCTGTGGAAATGGTCACTGAAGAGCCCTGTGACGAAGAGGTTTCCTCTGCAGCTGTTTACTGGTTTCTCTTTTGAGCCTAGGCTGGACATTGCTTCCTAGTTTTATTTTGTTTCACTTCCACGGGAATTCTTGCATTATTTGCCTGGTTTGGAGTTACCAAGTGAAGAGATGATGTCATTGGAAGCCATTCGAGAAAGTGTTTCAGGTTTTATAGATCTATTCTATTTATTGCTGAGTATATCTTCTAATTGAAAGGGCGTCTAAACTTCCCTGTTTCATTTTTGTTGATTTGATGGTTGGATAATAGAGGGAGGGATGATGCCATACACAAGAACAATTCTTGCTGAATTGTGTTTTCTTTATTCTTATGTTGCCTGCAAACAAAGTGCCACTTCAGATGTCCCAAACCTAAAAGATTGTTACTTTCTT                                                     ]
[+] EMBL AK073921             [    CCATCTCTCTCTCCCCTCTCTCTCTCTCTCTCTCTCTCTCTGATCTGCAGAGCCGGAGCCCGGAGGCGCGGCTGCGGCTGCCAAGCCTCCTCCTCCTCCTCCAGCGCGCGGCCAGCGAGCAGCCTCGGAGGCCACCGCCGCCGCCTCCTCGCCCGGACGGCGGGGGAGCGGGCGGTGCTCCGTCCAGCGGAGCGAGCCCCCCCAATCTTGGCCGGAATCGGATTGAAGGATCTTGCGTTAGTTACTGTGCTGTTCGCTGGATGCTGGCAATGGGGTCAGAGGAGTGGGAGTTGTATCCATCTTCCTTCATTGGTGCTCAGGTCATAGATTATGGGCATGTTTCTGGAGACATGGATGATGATCAGAGTGGAGACTTGGCCGTGTCGATGGACGCCGTTCTCCCTGATGATCTTTTAGAAAAGGTCCTCTCCTTCTTGCCTGTTGCAAGTGTCATAAGATCTGGATCTGTTTGCAAGAGATGGCATGAGATTGTGCATGCCCGGAGGCAGACATGGAGCAAAATGGTGCCTCAGAAGCCTTGGTACTTCATGTTTACCTGCAGCGAGGAAGCGGTCTCGGGGTTCACCTATGACCCGAGCCTGCGTAAGTGGTATGGATTCGACTTCCCTTGCATTGAGAAGACCACCTGGTCGATTTCCTCATCGTCCGGGTTGGTGTGTCTGATGGACAGTGAGGATAGGAGCCGCATCATCGTGTGCAACCCAATAACTAAGGACTGGAAGAGGCTTGTTGATGCTCCTGGTGGCAAGTCGGCTGATTACAGTGCTCTCGCCATTTCTGTGACCAGGACCTCTCATCAGTACAAGGTGGCTGTTGCAAGGTGCAACCAGGTGCCATCAGGGTATTATCAATGGGAGTTCACCATCCATTTGTACGAGTCAGAGATAAATACATGGGTGTCTCCCTTCACTGAACTATTGATTGGATGGCGAGGAGGTGATGAGTGCGTGATCTGTGATGGGGTCCTCTACTATCTGGTGTACTCAACAGGAGTTTTGGTGAATAACAACGAGCATCGCCATTGTCTTCTCATGTATGACCTATCTACCAGGCCTACTCACACTTCTTTGATGAGCATGGCTATACCAGTGCCGTGCCCTCTTACATGTGGCCGTTTGATGAACCTCAATGAGAGGCTTGTCTTGGTTGGGGGCATTGGCAAGCAAGATAGGCCTGGTATCATCAAGGGAATTGGCATCTGGGAGCTCCGGAACAAGGAGTGGCATGAGGTTGCTCGAATGCCTCACAAGTTTTTCCAAGGATTTGGCGAGTTCGATGATGTTTTTGCAAGCTGTGGGGCGGATGACCTTATCTATATTCAGAGCTATGGGTCACCGGCCCTCCTCACATTTGAATTAAACCAGAAGCTGTGGAAATGGTCACTGAAGAGCCCTGTGACGAAGAGGTTTCCTCTGCAGCTGTTTACTGGTTTCTCTTTTGAGCCTAGGCTGGACATTGCTTCCTAGTTTTATTTTGTTTCACTTCCAC GGAATTCTTGCATTATTTGCCTGGTTTGGAGTTACCAAGTGAAGAGATGATGTCATTGGAAGCCATTCGAGAAAGTGTTTCAGGTTTTATAGATCTATTCT                                                                                                                                                                                                                                                                   ]
[+] EMBL CB643734             [                                    TCTCTCTCTGATCTGCAGAGCCGGAGCCCGGAGGCGCGGCTGCGGCTGCCAAGCCTCCTCCTCCTCCTCCAGCGCGCGGCCAGCGAGCAGCCTCGGAGGCCACCGCCGCCGCCTCCTCGCCCGGACGGCGGGGGATCGGGCGGTGCTCCGTCCAGCGGAGCGAGCCCCCCCAATCTTGGCCGGAATCGGATTGAAGGATCTTGCGTTAGTTACTGTGCTGTTCGCTGGATGCTGGCAATGGGGTCAGAGGAGTGGGAGTTGTATCCATCTTCCTTCATTGGTGCTCAGGTCATAGATTATGGGCATGTTTCTGGAGACATGGATGATGATCAGAGTGGAGACTTGGCCGTGTCGATGGACGCCGTTCTCCCTGATGATCTTTTAGAAAAGGTCCTCTCCTTCTTGCCTGTTGCAAGTGTCATAAGATCTGGATCTGTTTGCAAGAGATGGCATGAGATTGTGCATGCCCGGAGGCAGACATGGAGCAAAATGGTGCCTCAGAAGCCTTGGTACTTCATGTTTACCTGCAGCGAGGAAGCGGTCTCGGGGTTCACCTATGACCCGAGCCTGCGTAAGTGGTATGGATTCGACTTCCCTTGCATTGAGAAGACCACCTGGTCGATTTCCTCATCGTCCGGGTTGGTGTGTCTGATGGACAGTGAGGATAGGAGCCGCATCATCGTGTGCAACCCAATAACTAAGGACTGGAAGAGGCTTGTTGATGCTCCTGGTGGCAAGTCGGCTGATTACAGTGCTCTCGCCATTTCTGTGACCAGGACCTCTCATCAGTACATGGTGGCTGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB668297             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GACCTATCTACCAGGCCTACTCACACTTCTTTGATGAGCATGGCTATACCAGTGCCGTGCCCTCTTACATGTGGCCGTTTGATGAACCTCAATGAGAGGCTTGTCTTGGTTGGGGGCATTGGCAAGCAAGATAGGCCTGGTATCATCAAGGGAATTGGCATCTGGGAGCTCCGGAACAAGGAGTGGCATGAGGTTGCTCGAATGCCTCACAAGTTTTTCCAAGGATTTGGCGAGTTCGATGATGTTTTTGCAAGCTGTGGGGCGGATGACCTTATCTATATTCAGAGCTATGGGTCACCGGCCCTCCTCACATTTGAATTAAACCAGAAGCTGTGGAAATGGTCACTGAAGAGCCCTGTGACGAAGAGGTTTCCTCTGCAGCTGTTTACTGGTTTCTCTTTTGAGCCTAGGCTGGACATTGCTTCCTAGTTTTATTTTGTTTCACTTCCACGGGAATTCTTGCATTATTTGCCTGGTTTGGAGTTACCAAGTGAAGAGATGATGTCATTGGAAGCCATTCGAGAAAGTGTTTCAGGTTTTATAGATCTATTCTATTTATTGCTGAGTATATCTTCTAATTGAAAGGGCGTCTAAACTTCCCTGTTTCATTTTTGTTGATTTGATGGTTGGATAATAGAGGGAGGGATGATGCCATACACAAGAACAATTCTTGCTGAATTGTGTTTTCTTTATTCTTATGTTGCCTGCAAACAAAGTGCCACTTCAGATGTCCCAAACCTAAAAGATTGTTACTTTCTTGATTTATAGTAGTCATTTGCGTTTGGGGTCCCCGCTGCTACTGATTTATNGTT]
[-] EMBL CB643735             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACACTTCTTTGATGAGCATGGCTATACCAGTGCCGTGCCCTCTTACATGTGGCCGTTTGATGAACCTCAATGAGAGGCTTGTCTTGGTTGGGGGCATTGGCAAGCAAGATAGGCCTGGTATCATCAAGGGAATTGGCATTTGGGAGCTCCGGAACAAGGAGTGGCATGAGGTTGCTCGAATCCCTCACAAGTTTTTCCAAGGATTTGGCGAGTTTGATGATGTTTTTGCAAGCTGTGGGGCGGATGCCCTTATTTATATTCAGAGCTATGGGTCACCGGCCCTCCTCCCATTTGAATTAAACCAGAAGCTGTGGAAATGGTCACTGAAGAGCCCTGTGACGAAGAGGTTTCCTCTGCAGCTGTTTACTGGTTTCTTTTTTGAGCCTAGGCTGGACATTGCTTCCTAGTTTTATTTTGTTTCACTTCCACGGGAATTTTTGCATTATTTGCCTGGTTTGGAGTTCCCAAGTGAAGAGATGATGTCATTGGAAGCCATTCGAGAAAGTGTTTCAGGTTTTATAGATTTATTTTATTTATTGCTGAGTATATCTTTTAATTGAAAGGGGGTTTAAACTTCCCTGTTTCATTTTTGTTGATTTGATGGTTGGATAATAGAGGGAGGGATGATGCCATACACAAGAACAATTCTTGGTGAATGGGGTTTTCTTTATTCTTATGTTGCCTGCAAACAAAGTGCCACTTCAGATGTCCCAAAAAAAAAAaaaaaaaag                                                           ]


>consensus_8907#0 CCCTCCATCTCTCTCTCCCCTCTCTCTCTCTCTCTCTCTCTCTCTGATCTGCAGAGCCGG AGCCCGGAGGCGCGGCTGCGGCTGCCAAGCCTCCTCCTCCTCCTCCAGCGCGCGGCCAGC GAGCAGCCTCGGAGGCCACCGCCGCCGCCTCCTCGCCCGGACGGCGGGGGAGCGGGCGGT GCTCCGTCCAGCGGAGCGAGCCCCCCCAATCTTGGCCGGAATCGGATTGAAGGATCTTGC GTTAGTTACTGTGCTGTTCGCTGGATGCTGGCAATGGGGTCAGAGGAGTGGGAGTTGTAT CCATCTTCCTTCATTGGTGCTCAGGTCATAGATTATGGGCATGTTTCTGGAGACATGGAT GATGATCAGAGTGGAGACTTGGCCGTGTCGATGGACGCCGTTCTCCCTGATGATCTTTTA GAAAAGGTCCTCTCCTTCTTGCCTGTTGCAAGTGTCATAAGATCTGGATCTGTTTGCAAG AGATGGCATGAGATTGTGCATGCCCGGAGGCAGACATGGAGCAAAATGGTGCCTCAGAAG CCTTGGTACTTCATGTTTACCTGCAGCGAGGAAGCGGTCTCGGGGTTCACCTATGACCCG AGCCTGCGTAAGTGGTATGGATTCGACTTCCCTTGCATTGAGAAGACCACCTGGTCGATT TCCTCATCGTCCGGGTTGGTGTGTCTGATGGACAGTGAGGATAGGAGCCGCATCATCGTG TGCAACCCAATAACTAAGGACTGGAAGAGGCTTGTTGATGCTCCTGGTGGCAAGTCGGCT GATTACAGTGCTCTCGCCATTTCTGTGACCAGGACCTCTCATCAGTACATGGTGGCTGTT GCAAGGTGCAACCAGGTGCCATCAGAGTATTATCAATGGGAGTTCACCATCCATTTGTAC GAGTCAGAGATGAATACATGGGTGTCTCCCTTCACTGAACTATTGATTGGATGGCGAGGA GGTGATGAGTGCGTGATCTGTGATGGGGTCCTCTACTATCTGGTGTACTCAACAGGAGTT TTGGTGAATAACAACGAGCATCGCCATTGTCTTCTCATGTATGACCTATCTACCAGGCCT ACTCACACTTCTTTGATGAGCATGGCTATACCAGTGCCGTGCCCTCTTACATGTGGCCGT TTGATGAACCTCAATGAGAGGCTTGTCTTGGTTGGGGGCATTGGCAAGCAAGATAGGCCT GGTATCATCAAGGGAATTGGCATCTGGGAGCTCCGGAACAAGGAGTGGCATGAGGTTGCT CGAATGCCTCACAAGTTTTTCCAAGGATTTGGCGAGTTCGATGATGTTTTTGCAAGCTGT GGGGCGGATGACCTTATCTATATTCAGAGCTATGGGTCACCGGCCCTCCTCACATTTGAA TTAAACCAGAAGCTGTGGAAATGGTCACTGAAGAGCCCTGTGACGAAGAGGTTTCCTCTG CAGCTGTTTACTGGTTTCTCTTTTGAGCCTAGGCTGGACATTGCTTCCTAGTTTTATTTT GTTTCACTTCCACGGGAATTCTTGCATTATTTGCCTGGTTTGGAGTTACCAAGTGAAGAG ATGATGTCATTGGAAGCCATTCGAGAAAGTGTTTCAGGTTTTATAGATCTATTCTATTTA TTGCTGAGTATATCTTCTAATTGAAAGGGCGTCTAAACTTCCCTGTTTCATTTTTGTTGA TTTGATGGTTGGATAATAGAGGGAGGGATGATGCCATACACAAGAACAATTCTTGCTGAA TTGTGTTTTCTTTATTCTTATGTTGCCTGCAAACAAAGTGCCACTTCAGATGTCCCAAAC CTAAAAGATTGTTACTTTCTTGATTTATAGTAGTCATTTGCGTTTGGGGTCCCCGCTGCT ACTGATTTATNGTT



consensusID : consensus_8907#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 812
fasta sequence
                              [TGTACTTGCTTGATAGTACCACCAATCCTAAAAAGCAAGATAGGCCTGGTATCATCAAGGGAATTGGCATCTGGGAGCTCCGGAACAAGGAGTGGCATGAGGTTGCTCGAATGCCTCACAAGTTTTTCCAAGGATTTGGCGAGTTCGATGATGTTTTTGCAAGCTGTGGGGCGGATGACCTTATCTATATTCAGAGCTATGGGTCACCGGCCCTCCTCACATTTGAATTAAACCAGAAGCTGTGGAAATGGTCACTGAAGAGCCCTGTGACGAAGAGGTTTCCTCTGCAGCTGTTTACTGGTTTCTCTTTTGAGCCTAGGCTGGACATTGCTTCCTAGTTTTATTTTGTTTCACTTCCACGGGAATTCTTGCATTATTTGCCTGGTTTGGAGTTACCAAGTGAAGAGATGATGTCATTGGAAGCCATTCGAGAAAGTGTTTCAGGTTTTATAGATCTATTCTATTTATTGCTGAGTATATCTTCTAATTGAAAGGGCGTCTAAACTTCCCTGTTTCATTTTTGTTGATTTGATGGTTGGATAATAGAGGGAGGGATGATGCCATACACAAGAACAATTCTTGCTGAATTGTGTTTTCTTTATTCTTATGTTGCCTGCAAACAAAGTGCCACTTCAGATGTCCCAAACCTAAAAGATTGTTACTTTCTTGATTTATAGTAGTCATTTGCGTTTGGGGTCCCCGCTGCTACTGATTTATGTTTTGTTTTATTACGACACCACTACATGCAAACATCTGAACTTGAAGCAGAGTCCTTTGTTGTTGAGTCAGTACTTGAAGCAGAGTCCTTGCTC]

[+] EMBL CB671788             [TGTACTTGCTTGATAGTACCACCAATCCTAAAAAGCAAGATAGGCCTGGTATCATCAAGGGAATTGGCATCTGGGAGCTCCGGAACAAGGAGTGGCATGAGGTTGCTCGAATGCCTCACAAGTTTTTCCAAGGATTTGGCGAGTTCGATGATGTTTTTGCAAGCTGTGGGGCGGATGACCTTATCTATATTCAGAGCTATGGGTCACCGGCCCTCCTCACATTTGAATTAAACCAGAAGCTGTGGAAATGGTCACTGAAGAGCCCTGTGACGAAGAGGTTTCCTCTGCAGCTGTTTACTGGTTTCTCTTTTGAGCCTAGGCTGGACATTGCTTCCTAGTTTTATTTTGTTTCACTTCCACGGGAATTCTTGCATTATTTGCCTGGTTTGGAGTTACCAAGTGAAGAGATGATGTCATTGGAAGCCATTCGAGAAAGTGTTTCAGGTTTTATAGATCTATTCTATTTATTGCTGAGTATATCTTCTAATTGAAAGGGCGTCTAAACTTCCCTGTTTCATTTTTGTTGATTTGATGGTTGGATAATAGAGGGAGGGATGATGCCATACACAAGAACAATTCTTGCTGAATTGTGTTTTCTTTATTCTTATGTTGCCTGCAAACAAAGTGCCACTTCAGATGTCCCAAACCTAAAAGATTGTTACTTTCTTGATTTATAGTAGTCATTTGCGTTTGGGGTCCCCGCTGCTACTGATTTATGTTTTGTTTTATTACGACACCACTACATGCAAACATCTGAACTTGAAGCAGAGTCCTTTGTTGTTGAGTCAGTACTTGAAGCAGAGTCCTTGCTC]


>consensus_8907#1 TGTACTTGCTTGATAGTACCACCAATCCTAAAAAGCAAGATAGGCCTGGTATCATCAAGG GAATTGGCATCTGGGAGCTCCGGAACAAGGAGTGGCATGAGGTTGCTCGAATGCCTCACA AGTTTTTCCAAGGATTTGGCGAGTTCGATGATGTTTTTGCAAGCTGTGGGGCGGATGACC TTATCTATATTCAGAGCTATGGGTCACCGGCCCTCCTCACATTTGAATTAAACCAGAAGC TGTGGAAATGGTCACTGAAGAGCCCTGTGACGAAGAGGTTTCCTCTGCAGCTGTTTACTG GTTTCTCTTTTGAGCCTAGGCTGGACATTGCTTCCTAGTTTTATTTTGTTTCACTTCCAC GGGAATTCTTGCATTATTTGCCTGGTTTGGAGTTACCAAGTGAAGAGATGATGTCATTGG AAGCCATTCGAGAAAGTGTTTCAGGTTTTATAGATCTATTCTATTTATTGCTGAGTATAT CTTCTAATTGAAAGGGCGTCTAAACTTCCCTGTTTCATTTTTGTTGATTTGATGGTTGGA TAATAGAGGGAGGGATGATGCCATACACAAGAACAATTCTTGCTGAATTGTGTTTTCTTT ATTCTTATGTTGCCTGCAAACAAAGTGCCACTTCAGATGTCCCAAACCTAAAAGATTGTT ACTTTCTTGATTTATAGTAGTCATTTGCGTTTGGGGTCCCCGCTGCTACTGATTTATGTT TTGTTTTATTACGACACCACTACATGCAAACATCTGAACTTGAAGCAGAGTCCTTTGTTG TTGAGTCAGTACTTGAAGCAGAGTCCTTGCTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8907#0      CCCTCCATCTCTCTCTCCCCTCTCTCTCTCTCTCTCTCTCTCTCTGATCTGCAGAGCCGG 60
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      AGCCCGGAGGCGCGGCTGCGGCTGCCAAGCCTCCTCCTCCTCCTCCAGCGCGCGGCCAGC 120
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      GAGCAGCCTCGGAGGCCACCGCCGCCGCCTCCTCGCCCGGACGGCGGGGGAGCGGGCGGT 180
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      GCTCCGTCCAGCGGAGCGAGCCCCCCCAATCTTGGCCGGAATCGGATTGAAGGATCTTGC 240
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      GTTAGTTACTGTGCTGTTCGCTGGATGCTGGCAATGGGGTCAGAGGAGTGGGAGTTGTAT 300
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      CCATCTTCCTTCATTGGTGCTCAGGTCATAGATTATGGGCATGTTTCTGGAGACATGGAT 360
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      GATGATCAGAGTGGAGACTTGGCCGTGTCGATGGACGCCGTTCTCCCTGATGATCTTTTA 420
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      GAAAAGGTCCTCTCCTTCTTGCCTGTTGCAAGTGTCATAAGATCTGGATCTGTTTGCAAG 480
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      AGATGGCATGAGATTGTGCATGCCCGGAGGCAGACATGGAGCAAAATGGTGCCTCAGAAG 540
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      CCTTGGTACTTCATGTTTACCTGCAGCGAGGAAGCGGTCTCGGGGTTCACCTATGACCCG 600
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      AGCCTGCGTAAGTGGTATGGATTCGACTTCCCTTGCATTGAGAAGACCACCTGGTCGATT 660
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      TCCTCATCGTCCGGGTTGGTGTGTCTGATGGACAGTGAGGATAGGAGCCGCATCATCGTG 720
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      TGCAACCCAATAACTAAGGACTGGAAGAGGCTTGTTGATGCTCCTGGTGGCAAGTCGGCT 780
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      GATTACAGTGCTCTCGCCATTTCTGTGACCAGGACCTCTCATCAGTACATGGTGGCTGTT 840
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      GCAAGGTGCAACCAGGTGCCATCAGAGTATTATCAATGGGAGTTCACCATCCATTTGTAC 900
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      GAGTCAGAGATGAATACATGGGTGTCTCCCTTCACTGAACTATTGATTGGATGGCGAGGA 960
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      GGTGATGAGTGCGTGATCTGTGATGGGGTCCTCTACTATCTGGTGTACTCAACAGGAGTT 1020
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      TTGGTGAATAACAACGAGCATCGCCATTGTCTTCTCATGTATGACCTATCTACCAGGCCT 1080
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      ACTCACACTTCTTTGATGAGCATGGCTATACCAGTGCCGTGCCCTCTTACATGTGGCCGT 1140
consensus_8907#1      ------------------------------------------------------------
                                                                                  

consensus_8907#0      TTGATGAACCTCAATGAGAGGCTTGTCTTGGTTGGGGGCATTGGCAAGCAAGATAGGCCT 1200
consensus_8907#1      ----TGTACTTGCTTGATAGTACCACC---------AATCCTAAAAAGCAAGATAGGCCT 47
                          ** ** *   *** **      *              *   ***************

consensus_8907#0      GGTATCATCAAGGGAATTGGCATCTGGGAGCTCCGGAACAAGGAGTGGCATGAGGTTGCT 1260
consensus_8907#1      GGTATCATCAAGGGAATTGGCATCTGGGAGCTCCGGAACAAGGAGTGGCATGAGGTTGCT 107
                      ************************************************************

consensus_8907#0      CGAATGCCTCACAAGTTTTTCCAAGGATTTGGCGAGTTCGATGATGTTTTTGCAAGCTGT 1320
consensus_8907#1      CGAATGCCTCACAAGTTTTTCCAAGGATTTGGCGAGTTCGATGATGTTTTTGCAAGCTGT 167
                      ************************************************************

consensus_8907#0      GGGGCGGATGACCTTATCTATATTCAGAGCTATGGGTCACCGGCCCTCCTCACATTTGAA 1380
consensus_8907#1      GGGGCGGATGACCTTATCTATATTCAGAGCTATGGGTCACCGGCCCTCCTCACATTTGAA 227
                      ************************************************************

consensus_8907#0      TTAAACCAGAAGCTGTGGAAATGGTCACTGAAGAGCCCTGTGACGAAGAGGTTTCCTCTG 1440
consensus_8907#1      TTAAACCAGAAGCTGTGGAAATGGTCACTGAAGAGCCCTGTGACGAAGAGGTTTCCTCTG 287
                      ************************************************************

consensus_8907#0      CAGCTGTTTACTGGTTTCTCTTTTGAGCCTAGGCTGGACATTGCTTCCTAGTTTTATTTT 1500
consensus_8907#1      CAGCTGTTTACTGGTTTCTCTTTTGAGCCTAGGCTGGACATTGCTTCCTAGTTTTATTTT 347
                      ************************************************************

consensus_8907#0      GTTTCACTTCCACGGGAATTCTTGCATTATTTGCCTGGTTTGGAGTTACCAAGTGAAGAG 1560
consensus_8907#1      GTTTCACTTCCACGGGAATTCTTGCATTATTTGCCTGGTTTGGAGTTACCAAGTGAAGAG 407
                      ************************************************************

consensus_8907#0      ATGATGTCATTGGAAGCCATTCGAGAAAGTGTTTCAGGTTTTATAGATCTATTCTATTTA 1620
consensus_8907#1      ATGATGTCATTGGAAGCCATTCGAGAAAGTGTTTCAGGTTTTATAGATCTATTCTATTTA 467
                      ************************************************************

consensus_8907#0      TTGCTGAGTATATCTTCTAATTGAAAGGGCGTCTAAACTTCCCTGTTTCATTTTTGTTGA 1680
consensus_8907#1      TTGCTGAGTATATCTTCTAATTGAAAGGGCGTCTAAACTTCCCTGTTTCATTTTTGTTGA 527
                      ************************************************************

consensus_8907#0      TTTGATGGTTGGATAATAGAGGGAGGGATGATGCCATACACAAGAACAATTCTTGCTGAA 1740
consensus_8907#1      TTTGATGGTTGGATAATAGAGGGAGGGATGATGCCATACACAAGAACAATTCTTGCTGAA 587
                      ************************************************************

consensus_8907#0      TTGTGTTTTCTTTATTCTTATGTTGCCTGCAAACAAAGTGCCACTTCAGATGTCCCAAAC 1800
consensus_8907#1      TTGTGTTTTCTTTATTCTTATGTTGCCTGCAAACAAAGTGCCACTTCAGATGTCCCAAAC 647
                      ************************************************************

consensus_8907#0      CTAAAAGATTGTTACTTTCTTGATTTATAGTAGTCATTTGCGTTTGGGGTCCCCGCTGCT 1860
consensus_8907#1      CTAAAAGATTGTTACTTTCTTGATTTATAGTAGTCATTTGCGTTTGGGGTCCCCGCTGCT 707
                      ************************************************************

consensus_8907#0      ACTGATTTATNGTT---------------------------------------------- 1874
consensus_8907#1      ACTGATTTATGTTTTGTTTTATTACGACACCACTACATGCAAACATCTGAACTTGAAGCA 767
                      **********  **                                              

consensus_8907#0      ---------------------------------------------
consensus_8907#1      GAGTCCTTTGTTGTTGAGTCAGTACTTGAAGCAGAGTCCTTGCTC 812
                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)