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Oryza sativa
cluster # 8931 cluster # 8931       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8931#0 length = 805 sequences # 6  

consensusID : consensus_8931#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 805
fasta sequence
                              [GGGCGCGGCCGTGCCAGCCAACCGCTGCGGCTGTGCAAAAGTCCTCTTGCTCGT-GTTGTAGTTGTGTTGCGTTCGCGTAGAAGTGGGTCGATCTCTTGAACATCAGCAAAGATGGCCGCCACCACGCCGGCAGCGGCAGCGGCCGCGGCGCACGTCGTCCACATCGAGGCCGTGCAGACGGCGGTGCCGACGCGCGTCGTGGAGCCCGGGAGGACGCGCCTCGTCGCCGTGGCGGCGCCGCCGCTCCCGGCGCCCGCGCTGCAGCGCCGCGTCCGCGCGGTGCTCTACTACCGCGGCGCCGGCGGGGCGGCGCCGGGCGCGTGGGAGGACGGGGTGTGGGTGAAGGAGTCGCTGAGCGAGGCGCTGGCCGACCACCCGGAGATGGCCGGCCGGCTCCGCCGCCGCGCCGACGGGTCGTGGGAGGTGAAGCTGAACGACACCGGCGTGCGCCTCCTCCAGGCGACGGTGGACGCGACCCTCGACGAGTTCCTCGCCGGCAAGGGCGCCCTGGCGCGCCGGGAGGCCGCGCTGGCGCCGTGGACCGACGTGAACGCCGACGACCCCGACATGTGCCCCCCGTTCTTCATGCAGCTGACACGGTTCCAGGGAGACGGCGGGTACGCCGTCGGCGTGAGCTGCGCGCTGGTGCTGGCCGACCCGCTGACGCTGGCGAGGTTCCTCCTGTCGTGGGCGCGCACGCACGCCCGCATCAGGGCGCAGGGCAAGGCCACCCCGCTCCCGATGGCGCAGTACCTCGCCTACTTCCAGCGCCCGGAGACCACCCGCAAGCGCGTCAGGTCCGTCC]

[+] EMBL CB645128             [GGGCGCGGCCGTGCCAGCCAACCGCTGCGGCTGTGCAAAAGTCCTCTTGCTCGT GTTGTAGTTGTGTTGCGTTCGCGTAGAAGTGGGTCGATCTCTTGAACATCAGCAAAGATGGCCGCCACCACGCCGGCAGCGGCAGCGGCCGCGGCGCACGTCGTCCACATCGAGGCCGTGCAGACGGCGGTGCCGACGCGCGTCGTGGAGCCCGGGAGGACGCGCCTCGTCGCCGTGGCGGCGCCGCCGCTCCCGGCGCCCGCGCTGCAGCGCCGCGTCCGCGCGGTGCTCTACTACCGCGGCGCCGGCGGGGCGGCGCCGGGCGCGTGGGAGGACGGGGTGTGGGTGAAGGAGTCCCTGAACGAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB655213             [                                            TCTTGCTCTTAGAAG AGTTGTGTTGCGTTCGCGTAGAAGTGGGTCGATCTCTTGAACATCAGCAAAGATGGCCGCCACCCCGCCGGCAGCGGCAGCGGCCGCGGCGCACGTCGTCCACATCGAGGCCGTGCAGACGGCGGTGCCGACGCGCGTCGTGGAGCCCGGGAGGACGCGCCTCGTCGCCGTGGCGGCGCCGCCGCTCCCGGCGCCCGCGCTGCAGCGCCGCGTCCGCGCGGTGCTCTACTACCGCGGCGCCGGCGGGGCGGCGCCGGGCGCGTGGGAGGACGGGGTGTGGGTTTTTGAGTCGCTGAGCGAGGCGCTGGCCGACCACCCGGAGATGGCCGGCCGGCTCCGCCGCCGCGCCGACGGGTCGTGGGAGGTGAAGCTGAACGACACCGGCGTGCGCCTCCTCCAGGCGACGGTGGACGCGACCCTCGACGAGTTCCTCGCCGGCAAGGGCGCCCTGGCGCGCCGGGAGGCCGCGCTGGCGCCGTGGACCGACGTGAACGCCGACGACCCCGACATGTGCCCCCCGTTCTTCATGCAGCTGACACGGTTCCAGGGAGACGGCGGGTACGCCGTCGGCGTGAGCTGCGCGCTGGTGCTGGCCGACCCGCTGACGCTGGCGAGGTTCCTCCTGTCGTGGGCGCGCACGCACGCCCCCATCAGGGCGCAGGGCAAGGCCACCCCGCTCCCGATGGCGCAGTACCTCGCCTACTTCCAGCGCCCGGAGACCACCCG                    ]
[+] EMBL CB682244             [                                             CTTGCTCGT GTTGTAGTTGTGTTGCGTTCGCGTAGAAGTGGGTCGATCTCTTGAACATCAGCAAAGATGGCCGCCACCACGCCGGCAGCGGCAGCGGCCGCGGCGCACGTCGTCCACATCGAGGCCGTGCAGACGGCGGTGCCGACGCGCGTCGTGGAGCCCGGGAGGACGCGCCTCGTCGCCGTGGCGGCGCCGCCGCTCCCGGCGCCCGCGCTGCAGCGCCGCGTCCGCGCGGTGCTCTACTACCGCGGCGCCGGCGGGGCGGCGCCGGGCGCGTGGGAGGACGGGGTGTGGGTGAAGGAGTCGCTGAGCGAGGCGCTGGCCGACCACCCGGAGATGGCCGGCCGGCTCCGCCGCCGCGCCGACGGGTCGTGGGAGGTGAAGCTGAACGACACCGGCGTGCGCCTCCTCCAGGCGACGGTGGACGCGACCCTCGACGAGTTCCTCGCCGGCAAGGGCGCCCTGGCGCGCCGGGAGGCCGCGCTGGCGCCGTGGACCGACGTGAACGCCGACGACCCCGACATGTGCCCCCCGTTCTTCATGCAGCTGACACGGATCCAGGGAGACGGCGGGTACGCCGTCTGCGTGAGCTGCGCGCTGGTGCTGGCCGACCCGCTGACACTGGCGAGGTTCCTCCTGTCG                                                                                                                      ]
[+] EMBL CB641500             [                                                    GT GTTGTAGTTGTGTTGCGTTCGCGTAGAAGTGGGTCGATCTCTTGAACATCAGCAAAGATGGCCGCCACCACGCCGGCAGCGGCAGCGGCCGCGGCGCACGTCGTCCACATCGAGGCCGTGCAGACGGCGGTGCCGACGCGCGTCGTGGAGCCCGGGAGGACGCGCCTCGTCGCCGTGGCGGCGCCGCCGCTCCCGGCGCCCGCGCTGCAGCGCCGCGTCCGCGCGGTGCTCTACTACCGCGGCGCCGGCGGGGCGGCGCCGGGCGCGTGGGAGGACGGGGTGTGGGTGAAGGAGTCGCTGAGCGAGGCGCTGGCCGACCACCCGGAGATGGCCGGCCGGCTCCGCCGCCGCGCCGACGGGTCGTGGGAGGTGAAGCTGAACGACACCGGCGTGCGCCTCCTCCAGGCGACGGTGGACGCGACCCTCGACGAGTTCCTCGCCGGCAAGGGCGCCCTGGCGCGCCGGGAGGCCGCGCTGGCGCCGTGGACCGACGTGAACGCCGACGACCCCGACATGTGCCCCCCGTTCTTCATGCAGCTGACACGGTTCCAGGGAGACGGCGGGTACGCCGTCGGCGTGAGCTGCGCGCTGGTGCTGGCCGACCCGCTGACGCTGGCGAGGTTCCTCCTGTCGTGGGCGCGCACGCACGCCCGC                                                                                                 ]
[+] EMBL CB651332             [                                                       GTTGTACTTGTGTTGCGTTCGCGTAGAAGTGGGTCGATCTCTTGAACATCAGCAAAGATGGCCGCCACCACGCCGGCAGCGGCAGCGGCCGCGGCGCACGTCGTCCACATCGAGGCCGTGCAGACGGCGGTGCCGACGCGCGTCGTGGAGCCCGGGAGGACGCGCCTCGTCGCCGTGGCGGCGCCGCCGCTCCCGGCGCCCGCGCTGCAGCGCCGCGTCCGCGCGGTGCTCTACTACCGCGGCGCCGGCGGGGCGGCGCCGGGCGCGTGGGAGGACGGGGTGTGGGTGAAGGAGTCGCTGAGCGAGGCGCTGGCCGACCACCCGGAGATGGCCGGCCGGCTCCGCCGCCGCGCCGACGGGTCGTGGGAGGTGAAGCTGAACGACACCGGCGTGCGCCTCCTCCAGGCGACGGTGGACGCGACCCTCGACGAGTTCCTCGCCGGCAAGGGCGCCCTGGCGCGCCGGGAGGCCGCGCTGGCGCCGTGGACCGACGTGAACGCCGACGACCCCGACATGTGCCCCCCGTTCTTCATGCAGCTGACACGGTTCCAGGGAGACGGCGGGTACGCCGTCGGCGTGAGCTGCGCGCTGGTGCTGGCCGACCCGCTGACGCTGGCGAGGTTCCTCCTGTCGTGGGCGCGCACGCACGCCCGCATCAGGGCGCAGGGCAAGGCCACCCCGCTCCCGATGGCGCAGTACCTCGCCTACTTCCAGCGCCCGGAGACCACCCGCAAGCGCGTCAGGTCCGTCC]
[+] EMBL CB678657             [                                                                            CGTAGAAGTGGGTCGATCTCTTGAACATCAGCAAAGATGGCCGCCACCACGCCGGCAGCGGCAGCGGCCGCGGCGCACGTCGTCCACATCGAGGCCGTGCAGACGGCGGTGCCGACGCGCGTCGTGGAGCCCGGGAGGACGCGCCTCGTCGCCGTGGCGGCGCCGCCGCTCCCGGCGCCCGCGCTGCAGCGCCGCGTCCGCGCGGTGCTCTACTACCGCGGCGCCGGCGGGGCGGCGCCGGGCGCGTGGGAGGACGGGGTGTGGGTGAAGGAGTCGCTGAGCGAGGCGCTGGCCGACCACCCGGAGATGGCCGGCCGGCTCCGCCGCCGCGCCGACGGGTCGTGGGAGGTGAAGCTGAACGACACCGGCGTGCGCCTCCTCCAGGCGACGGTGGACGCGACCCTCGACGAGTTCCTCGCCGGCAAGGGCGCCCTGGCGCGCCGGGAGGCCGCGCTGGCGCCGTGGACCGACGTGAACGCCGACGACCCCGACATGTGCCCCCCGTTCTTCATGCAGCTGACACGGTTCCAGGGAGACGGCGGGTACGCCGTCGGCGTGAGCTGCGCGCTGGTGCTGGCCGACCCGCTGACGCTGGCGAGGTTCCTCCTGTCGTGGGCGCGCACGCACGCCCGCATCAGGGCGCAGGGCAAGGCCACCCCGCTCCCGATGGCGCAGTACCTCGCCTACTTGCAGCGCC                                 ]


>consensus_8931#0 GGGCGCGGCCGTGCCAGCCAACCGCTGCGGCTGTGCAAAAGTCCTCTTGCTCGTGTTGTA GTTGTGTTGCGTTCGCGTAGAAGTGGGTCGATCTCTTGAACATCAGCAAAGATGGCCGCC ACCACGCCGGCAGCGGCAGCGGCCGCGGCGCACGTCGTCCACATCGAGGCCGTGCAGACG GCGGTGCCGACGCGCGTCGTGGAGCCCGGGAGGACGCGCCTCGTCGCCGTGGCGGCGCCG CCGCTCCCGGCGCCCGCGCTGCAGCGCCGCGTCCGCGCGGTGCTCTACTACCGCGGCGCC GGCGGGGCGGCGCCGGGCGCGTGGGAGGACGGGGTGTGGGTGAAGGAGTCGCTGAGCGAG GCGCTGGCCGACCACCCGGAGATGGCCGGCCGGCTCCGCCGCCGCGCCGACGGGTCGTGG GAGGTGAAGCTGAACGACACCGGCGTGCGCCTCCTCCAGGCGACGGTGGACGCGACCCTC GACGAGTTCCTCGCCGGCAAGGGCGCCCTGGCGCGCCGGGAGGCCGCGCTGGCGCCGTGG ACCGACGTGAACGCCGACGACCCCGACATGTGCCCCCCGTTCTTCATGCAGCTGACACGG TTCCAGGGAGACGGCGGGTACGCCGTCGGCGTGAGCTGCGCGCTGGTGCTGGCCGACCCG CTGACGCTGGCGAGGTTCCTCCTGTCGTGGGCGCGCACGCACGCCCGCATCAGGGCGCAG GGCAAGGCCACCCCGCTCCCGATGGCGCAGTACCTCGCCTACTTCCAGCGCCCGGAGACC ACCCGCAAGCGCGTCAGGTCCGTCC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)