cluster # 8940

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Oryza sativa
cluster # 8940 cluster # 8940 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8940#0 length = 314 sequences # 6

consensusID : consensus_8940#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 314
fasta sequence

                              [ACTTCGAGGACTGCGGAGGAATCGCCTGCTAAGATACGAGGCCGGAGCCTATTCTTATACGTCTACAACGTGCGGGAGGTATCATCGCGTTCTGGCATGGATTCTGACTTAGAGGCGTTCAGCCATTATCCAGCAGATGGTAGCTTCGCGGCACTGCCCGGTCGGACAACCGCAAAAACCAATTATCTGAATGAGCGGTTCCTCTCGTACTGAGCTCAATTACCATTGCGATGAGTTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC]

[+] EMBL BI306279             [ACTTCGAGGACTGCGGAGGAATCGCCTGCTAAGATACGAGGCCGGAGCCTATTCTTATACGTCTACAACGTGCGGGAGGTATCATCGCGTTCTGGCATGGATTCTGACTTAGAGGCGTTCAGCCATTATCCAGCAGATGGTAGCTTCGCGGCACTGCCCGGTCGGACAACCGCAAAAACCAATTATCTGAATGAGCGGTTCCTCTCGTACTGAGCTCAATTACCATTGCGATGAGTTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC]
[+] EMBL CB965888             [  TTCGAGGACTGC NAGGAATCGCCTGCTAAGATACGAGGCCGGAGCCTATTCTTATACGTCTACAACGTGCGGGAGGTATCATCGCGTTCTGGCATGGATTCTGACTTAGAGGCGTTCAGCCATTATCCAGCAGATGGTAGCTTCGCGGCACTGCCCGGTCGGACAACCGCAAAAACCAATTATCTGAATGAGCGGTTCCTCTCGTACTGAGCTCAATTACCATTGCGATGAGTTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT  ]
[+] EMBL CB967271             [   TCGAGGACTGCGGAGGAATCGCCTGCTAAGATACGAGGCCGGAGCCTATTCTTATACGTCTACAACGTGCGGGAGGTATCATCGCGTTCTGGCATGGATTCTGACTTAGAGGCGTTCAGCCATTATCCAGCAGATGGTAGCTTCGCGGCACTGCCCGGTCGGACAACCGCAAAAACCAATTATCTGAATGAGCGGTTCCTCTCGTACTGAGCTCAATTACCATTGCGATGAGTTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT  ]
[+] EMBL CB966409             [   TCGAGGACTGCGGAGGAATCGCCTGCTAAGATACGAGG CGGAGCCTATTCTTATACGTCTACAACGTGCGGGAGGTATCATCGCGTTCTGGCATGGATTCTGACTTAGAGGCGTTCAGCCATTATCCAGCAGATGGTAGCTTCGCGGCACTGCCCGGTCGGACAACCGCAAAAACCAATTATCTGAATGAGCGGTTCCTCTCGTACTGAGCTCAATTACCATTGCGATGAGTTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT  ]
[+] EMBL CB966246             [         ACTGCGGAGGAATCGCCTGCTAAGATACGAGGCCGGAGCCTATTCTTATACGTCTACAACGTGCGGGAGGTATCATCGCGTTCTGGCATGGATTCTGACTTAGAGGCGTTCAGCCATTATCCAGCAGATGGTAGCTTCGCGGCACTGCCCGGTCGGACAACCGCAAAAACCAATTATCTGAATGAGCGGTTCCTCTCGTACTGAGCTCAATTACCATTGCGATGAGTTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT  ]
[+] EMBL CB965513             [                          TGCTAAGATACGAGGCCGGAGCCTATTCTTATACGTCTACAACGTGCGGGAGGTATCATCGCGTTCTGGCATGGATTCTGACTTAGAGGCGTTCAGCCATTATCCAGCAGATGGTAGCTTCGCGGCACTGCCCGGTCGGACAACCGCAAAAACCAATTATCTGAATGAGCGGTTCCTCTCGTACTGAGCTCAATTACCATTGCGATGAGTTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT  ]




>consensus_8940#0
ACTTCGAGGACTGCGGAGGAATCGCCTGCTAAGATACGAGGCCGGAGCCTATTCTTATAC
GTCTACAACGTGCGGGAGGTATCATCGCGTTCTGGCATGGATTCTGACTTAGAGGCGTTC
AGCCATTATCCAGCAGATGGTAGCTTCGCGGCACTGCCCGGTCGGACAACCGCAAAAACC
AATTATCTGAATGAGCGGTTCCTCTCGTACTGAGCTCAATTACCATTGCGATGAGTTCAT
CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAG
TGGGTGAACAATCC

clustalw multiple alignements is not computed in this case